pycom12g09140

histone-lysine N-methyltransferase, H3 lysine-9 specific

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
OG0010169
Physical Location & Seq
Forward (+)
11008949 .. 11011355
2407 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g09140.1

Sequence Viewer

Length: 2226 bp
ATGGAACAAAGTTTAGGTCAAGAGTCCGTAAGGCCTTTGAGGCGTCTTGTTCCGTTGTTCCCGTCAGCTTCTAATAATTCTTCATTTTCAACTCCACAAGGTGCTGCTCCTTTTGTTTGTGTTTCTCCTGCTGGCCCTTTCCCACCCGAGGTTGCCCCGTTTTTTCCGTTCTTCATTTCTCCAGAGTCGCAAAGGCCACTAGAACAAAATCTGCAAACACCAATATCAAATGCAGTCCCAATTAATTCATATAGGACGCCTCCATCCGCAGAAGCTAATGGAGATACTAGGGCAGCAAGAAGGCTTAATCGAAGTCGTGGTCAGCCACAATCCCAAAGTGGGAATGCAGAGGAAGATGGTTTGGATGGAGACAATACAAGGAAGGTGGGGAGGCCAAGGAGTAAGTTCCGGTCTCAGAAGAGGACAAGGGCTGGCCAGGACATTAATGTTGCTTTGCCTGATGTTGACATTGATGCAATAATTGATAATGTTCTTACAACATTTACCAATACATTCCAACAAACTGATAGTGACAGGGAATCGGTTGGATATGCACTCACGTCTTATGACTTGGTGCGAAGAAGGATTACACAAGTTGAAGAGATGAAGGAAAGAATACCAGGAGCCCCAAGAACAGGACGCCTCGATCTAAGGACAGGAACACTCTTCATGAATAAGGGAATTAGGACAAATGCCAAGAGGAGGATTGGTGCAGTGCCCGGTGTTGAAGTCGGGGATATCTACTTTTTCCGAATGGAATTGTGCTTGATTGGGTTACATGCTCCAACGATGGGTGGAATTGATTACCTGGGAGTCAAGAACAGTACAGAGGAAGAGCCCTTAGCATTGAGCATCGTTTCTTCTGGAGGATATGAGGATTCTGTGGAGGATTCGAATGTGTTGATATACAGTGGCCAAGGTGGTAATGCTAGCAATGATTTCAGGAGAGGTAAGGAACTGAAGGATCAGAAGCTTGAAAGGGGTAATCTCGCTTTGGAGAAAAGCTTGCACCGGGGTAATGATGTCAGAGTAATTCGAGGTTTAAAGGATGTATCTAATCCAACTGGGAAGGTATATGTCTATGATGGTCTATATAAAATTCACGAATCATGGGTGGACAAAGGGAACAGTGGTTGCAATGTATTTAAGTATAAATTGGTAAGGTTACCAGGCCAGCCTGAAGCATTTACCATTTGGAAATCAATTGAACAGTGGAAAGAAGAAACTACTACTACGAGAGTTGGACTTATATTGCCTGACCTTACTTCAGGAGCTGAAAATTTACCCGTTTCTCTGGTAAATGATGTTGATGGCGAGAAAGGCCCTGCACACTTCACATATATTTCTAGCCTGCAGTATTCTAAACTGGTGAATCTTACAGAACCTGCTGATGGATGTCTCTGTATTGGTGGGTGTCTCCCTGGTAACTCCAATTGCTCATGCATTAAGATAAATGGAGATTTTCTCCCGTATACTGCAAGTGGGCTTCTTGTGAACCAAAAATCCTTACTTCATGAATGTGGTCCATCCTGTCAGTGCCCTCCTAATTGTCGGAATCGAGTGTCTCAAAGTGGCCTGAAAGTTCGTCTGGAGGTGTTTAAAACTAAGGATAAAGGTTGGGGTCTGCGGTCACTGGATCCCATCCGCGCTGGTTCTTTCTTATGTGAATATGCAGGACAAGTTCTTAATATTTCTGGGGTAGAAGAAATGGGGAGTGATTATGAAGACGATTACATTTTTGATGCTACTCGTACCTGTCAGCCACTCGGAGTTTTGCCTGGTGATTCTAAGGAGACTTCAAAGGCCCCATTTCCTCTAATTATAAGTGGAAATACTGCTGGAAATGTTGCTCGTTTTATGAATCATAGCTGTTCTCCAAATATACTTTGGCAGCCAGTTTTACGAGAAACTAAAAATGAGGCTGACCTCCATATTGCATTTTATGCGGTTGGACACATTCCTCCTATGACGGAGTTGACATATGATTATGGGGTGGTCCCTCAAGAGAAAGCATACCATAGGAAGAAAGTGTGCCTTTGCGGGTCAATAAAGAATTATGCATCTAGAAGAAGGTTAGAGGCTTTCAGTTTCCTGACTGAGTTTATTTCTTACTATGATACGTTTTCTGTTTGTCTTGTTTTTTGTTTCATCCTTGAACGAAGCATGTATGATAATGAAAAAGTTTATGTTTGGAAACATGTGATATGTTATCATGAAATATGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00260 ko00310 ko01100 ko04146 ko04211 map00260 map00310 map01100 map04146 map04211
Pfam Domains
Protein Families
AT_hook Pre-SET SAD_SRA SET

Protein Analysis

742

Amino Acids

82.22

Weight (kDa)

7.1

Isoelectric Point (pI)

52.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SAD_SRA PF02182 235 - 392 3.2e-53 SAD/SRA domain
Pre-SET PF05033 423 - 520 5.7e-22 Pre-SET motif
SET PF00856 539 - 664 1.1e-17 SET domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1823
Acc36I ACCTGC 1 cut(s) 1393
AccI GTMKAC 1 cut(s) 1472
AccII CGCG 1 cut(s) 1647
AciI CCGC 5 cut(s) 267, 1627, 1645, 1946, 2040
AclWI GGATC 3 cut(s) 972, 1631, 1644
AcoI YGGCCR 2 cut(s) 433, 913
AcsI RAATTY 2 cut(s) 1098, 1279
AcuI CTGAAG 3 cut(s) 980, 1200, 1251
AcyI GRCGYC 3 cut(s) 43, 257, 640
AdeI CACNNNGTG 1 cut(s) 101
AfaI GTAC 2 cut(s) 826, 1753
AfiI CCNNNNNNNGG 6 cut(s) 148, 339, 635, 702, 791, 1391
AflIII ACRYGT 1 cut(s) 2197
AgsI TTSAA 7 cut(s) 90, 599, 728, 977, 1208, 1800, 2156
AjiI CACGTC 1 cut(s) 561
AjnI CCWGG 6 cut(s) 435, 619, 807, 1168, 1420, 1777
AloI GAACNNNNNNTCC 2 cut(s) 1487, 1519
AluBI AGCT 6 cut(s) 68, 275, 973, 1005, 1274, 1869
AluI AGCT 6 cut(s) 68, 275, 973, 1005, 1274, 1869
Alw26I GTCTC 6 cut(s) 363, 417, 1403, 1421, 1569, 1787
AlwI GGATC 3 cut(s) 972, 1631, 1644
AlwNI CAGNNNCTG 2 cut(s) 1274, 1385
Ama87I CYCGRG 1 cut(s) 146
ApeKI GCWGC 3 cut(s) 104, 293, 1891
ApoI RAATTY 2 cut(s) 1098, 1279
ArsI GACNNNNNNTTYG 3 cut(s) 33, 304, 336
AseI ATTAAT 2 cut(s) 243, 444
AspLEI GCGC 1 cut(s) 1649
AspS9I GGNCC 5 cut(s) 134, 1322, 1523, 1804, 1996
AsuC2I CCSGG 2 cut(s) 720, 1013
AsuHPI GGTGA 2 cut(s) 1381, 1793
AsuII TTCGAA 1 cut(s) 893
AsuNHI GCTAGC 1 cut(s) 929
AvaI CYCGRG 1 cut(s) 146
AvaII GGWCC 2 cut(s) 1523, 1996
BaeGI GKGCMC 2 cut(s) 720, 1541
BalI TGGCCA 2 cut(s) 435, 915
BamHI GGATCC 1 cut(s) 1636
BanII GRGCYC 2 cut(s) 628, 840
BarI GAAGNNNNNNTAC 2 cut(s) 571, 603
BbsI GAAGAC 1 cut(s) 1731
BbvI GCAGC 3 cut(s) 91, 305, 1903
BccI CCATC 9 cut(s) 271, 350, 359, 784, 1079, 1304, 1385, 1534, 1649
BciT130I CCWGG 6 cut(s) 437, 621, 809, 1170, 1422, 1779
BcnI CCSGG 2 cut(s) 720, 1013
BcoDI GTCTC 6 cut(s) 363, 417, 1403, 1421, 1569, 1787
BfaI CTAG 5 cut(s) 200, 288, 930, 1347, 2064
BfmI CTRYAG 1 cut(s) 1352
BfuAI ACCTGC 1 cut(s) 1393
BglI GCCNNNNNGGC 1 cut(s) 40
BisI GCNGC 3 cut(s) 105, 294, 1892
BlsI GCNGC 3 cut(s) 106, 295, 1893
Bme1390I CCNGG 8 cut(s) 437, 621, 720, 809, 1013, 1170, 1422, 1779
Bme18I GGWCC 2 cut(s) 1523, 1996
BmeT110I CYCGRG 1 cut(s) 146
BmgBI CACGTC 1 cut(s) 561
BmgT120I GGNCC 5 cut(s) 134, 1322, 1523, 1804, 1996
BmiI GGNNCC 4 cut(s) 625, 1638, 1806, 1998
BmrFI CCNGG 8 cut(s) 437, 621, 720, 809, 1013, 1170, 1422, 1779
BmrI ACTGGG 1 cut(s) 1074
BmsI GCATC 4 cut(s) 463, 861, 1732, 2069
BmtI GCTAGC 1 cut(s) 933
BmuI ACTGGG 1 cut(s) 1074
BpiI GAAGAC 1 cut(s) 1731
BplI GAGNNNNNCTC 2 cut(s) 1449, 1481
BpmI CTGGAG 3 cut(s) 165, 885, 1610
Bpu10I CCTNAGC 1 cut(s) 841
Bpu14I TTCGAA 1 cut(s) 893
BpuEI CTTGAG 1 cut(s) 1986
BpuMI CCSGG 2 cut(s) 720, 1013
BsaHI GRCGYC 3 cut(s) 43, 257, 640
BsaI GGTCTC 1 cut(s) 417
BsaJI CCNNGG 6 cut(s) 147, 395, 808, 916, 1012, 1420
BsaWI WCCGGW 1 cut(s) 408
BsaXI ACNNNNNCTCC 2 cut(s) 694, 724
Bsc4I CCNNNNNNNGG 6 cut(s) 148, 339, 635, 702, 791, 1391
Bse1I ACTGG 4 cut(s) 1069, 1371, 1638, 1895
Bse3DI GCAATG 2 cut(s) 940, 1144
BseBI CCWGG 6 cut(s) 437, 621, 809, 1170, 1422, 1779
BseDI CCNNGG 6 cut(s) 147, 395, 808, 916, 1012, 1420
BseGI GGATG 7 cut(s) 263, 370, 1054, 1400, 1526, 1641, 2148
BseLI CCNNNNNNNGG 6 cut(s) 148, 339, 635, 702, 791, 1391
BseMI GCAATG 2 cut(s) 940, 1144
BseMII CTCAG 2 cut(s) 428, 2088
BseNI ACTGG 4 cut(s) 1069, 1371, 1638, 1895
BseRI GAGGAG 1 cut(s) 715
BseSI GKGCMC 2 cut(s) 720, 1541
BseXI GCAGC 3 cut(s) 91, 305, 1903
BsgI GTGCAG 2 cut(s) 732, 1311
Bsh1236I CGCG 1 cut(s) 1647
BsiHKCI CYCGRG 1 cut(s) 146
BsiSI CCGG 3 cut(s) 409, 720, 1012
BslFI GGGAC 2 cut(s) 221, 1982
BslI CCNNNNNNNGG 6 cut(s) 148, 339, 635, 702, 791, 1391
BsmAI GTCTC 6 cut(s) 363, 417, 1403, 1421, 1569, 1787
BsmFI GGGAC 2 cut(s) 221, 1982
BsmI GAATGC 1 cut(s) 349
Bso31I GGTCTC 1 cut(s) 417
BsoBI CYCGRG 1 cut(s) 146
Bsp119I TTCGAA 1 cut(s) 893
Bsp1286I GDGCHC 4 cut(s) 628, 720, 840, 1541
Bsp143I GATC 3 cut(s) 646, 964, 1636
BspACI CCGC 5 cut(s) 267, 1627, 1645, 1946, 2040
BspCNI CTCAG 2 cut(s) 427, 2089
BspFNI CGCG 1 cut(s) 1647
BspHI TCATGA 3 cut(s) 669, 1513, 2212
BspLI GGNNCC 4 cut(s) 625, 1638, 1806, 1998
BspMAI CTGCAG 1 cut(s) 1356
BspMI ACCTGC 1 cut(s) 1393
BspOI GCTAGC 1 cut(s) 933
BspPI GGATC 3 cut(s) 972, 1631, 1644
BspQI GCTCTTC 1 cut(s) 828
BspT104I TTCGAA 1 cut(s) 893
BspTNI GGTCTC 1 cut(s) 417
BsrDI GCAATG 2 cut(s) 940, 1144
BsrI ACTGG 4 cut(s) 1069, 1371, 1638, 1895
BssECI CCNNGG 6 cut(s) 147, 395, 808, 916, 1012, 1420
BssMI GATC 3 cut(s) 646, 964, 1636
BssNAI GTATAC 1 cut(s) 1473
BssNI GRCGYC 3 cut(s) 43, 257, 640
BssT1I CCWWGG 2 cut(s) 395, 916
Bst1107I GTATAC 1 cut(s) 1473
Bst2UI CCWGG 6 cut(s) 437, 621, 809, 1170, 1422, 1779
Bst4CI ACNGT 4 cut(s) 824, 911, 1130, 1212
Bst6I CTCTTC 4 cut(s) 413, 594, 671, 828
BstACI GRCGYC 3 cut(s) 43, 257, 640
BstAPI GCANNNNNTGC 1 cut(s) 1943
BstBI TTCGAA 1 cut(s) 893
BstC8I GCNNGC 6 cut(s) 133, 433, 931, 1007, 1175, 1352
BstDEI CTNAG 6 cut(s) 414, 650, 841, 1605, 1788, 2097
BstEII GGTNACC 1 cut(s) 1164
BstF5I GGATG 7 cut(s) 263, 370, 1054, 1400, 1526, 1641, 2148
BstFNI CGCG 1 cut(s) 1647
BstHHI GCGC 1 cut(s) 1649
BstKTI GATC 3 cut(s) 649, 967, 1639
BstMAI GTCTC 6 cut(s) 363, 417, 1403, 1421, 1569, 1787
BstMBI GATC 3 cut(s) 646, 964, 1636
BstMWI GCNNNNNNNGC 3 cut(s) 40, 1320, 1943
BstNI CCWGG 6 cut(s) 437, 621, 809, 1170, 1422, 1779
BstNSI RCATGY 3 cut(s) 782, 2167, 2201
BstPI GGTNACC 1 cut(s) 1164
BstSCI CCNGG 8 cut(s) 435, 619, 718, 807, 1011, 1168, 1420, 1777
BstSFI CTRYAG 1 cut(s) 1352
BstSLI GKGCMC 2 cut(s) 720, 1541
BstUI CGCG 1 cut(s) 1647
BstV1I GCAGC 3 cut(s) 91, 305, 1903
BstV2I GAAGAC 1 cut(s) 1731
BstX2I RGATCY 1 cut(s) 1636
BstYI RGATCY 1 cut(s) 1636
BstZ17I GTATAC 1 cut(s) 1473
BtrI CACGTC 1 cut(s) 561
BtsCI GGATG 7 cut(s) 263, 370, 1054, 1400, 1526, 1641, 2148
BtsI GCAGTG 1 cut(s) 720
BtsIMutI CAGTG 6 cut(s) 720, 916, 1135, 1217, 1541, 1631
BveI ACCTGC 1 cut(s) 1393
Cac8I GCNNGC 6 cut(s) 133, 433, 931, 1007, 1175, 1352
CaiI CAGNNNCTG 2 cut(s) 1274, 1385
CciI TCATGA 3 cut(s) 669, 1513, 2212
CfoI GCGC 1 cut(s) 1649
Cfr13I GGNCC 5 cut(s) 134, 1322, 1523, 1804, 1996
CseI GACGC 3 cut(s) 32, 265, 648
Csp6I GTAC 2 cut(s) 825, 1752
CspCI CAANNNNNGTGG 2 cut(s) 366, 401
CviAII CATG 8 cut(s) 670, 779, 1110, 1440, 1514, 2164, 2198, 2213
CviQI GTAC 2 cut(s) 825, 1752
DdeI CTNAG 6 cut(s) 414, 650, 841, 1605, 1788, 2097
DpnI GATC 3 cut(s) 648, 966, 1638
DpnII GATC 3 cut(s) 646, 964, 1636
DraI TTTAAA 2 cut(s) 1044, 1600
DraIII CACNNNGTG 1 cut(s) 101
EaeI YGGCCR 2 cut(s) 433, 913
Eam1104I CTCTTC 4 cut(s) 413, 594, 671, 828
EarI CTCTTC 4 cut(s) 413, 594, 671, 828
Eco130I CCWWGG 2 cut(s) 395, 916
Eco147I AGGCCT 1 cut(s) 34
Eco24I GRGCYC 2 cut(s) 628, 840
Eco31I GGTCTC 1 cut(s) 417
Eco32I GATATC 1 cut(s) 739
Eco47I GGWCC 2 cut(s) 1523, 1996
Eco57I CTGAAG 3 cut(s) 980, 1200, 1251
Eco88I CYCGRG 1 cut(s) 146
Eco91I GGTNACC 1 cut(s) 1164
EcoO109I RGGNCCY 2 cut(s) 1322, 1804
EcoO65I GGTNACC 1 cut(s) 1164
EcoRII CCWGG 6 cut(s) 435, 619, 807, 1168, 1420, 1777
EcoRV GATATC 1 cut(s) 739
EcoT14I CCWWGG 2 cut(s) 395, 916
EcoT22I ATGCAT 2 cut(s) 1445, 2062
EcoT38I GRGCYC 2 cut(s) 628, 840
ErhI CCWWGG 2 cut(s) 395, 916
FaeI CATG 8 cut(s) 673, 782, 1113, 1443, 1517, 2167, 2201, 2216
FalI AAGNNNNNCTT 2 cut(s) 2019, 2051
FaqI GGGAC 2 cut(s) 221, 1982
FatI CATG 8 cut(s) 669, 778, 1109, 1439, 1513, 2163, 2197, 2212
FauI CCCGC 1 cut(s) 2033
FauNDI CATATG 1 cut(s) 1981
FblI GTMKAC 1 cut(s) 1472
Fnu4HI GCNGC 3 cut(s) 105, 294, 1892
FokI GGATG 7 cut(s) 250, 377, 1061, 1407, 1513, 1628, 2135
FriOI GRGCYC 2 cut(s) 628, 840
Fsp4HI GCNGC 3 cut(s) 105, 294, 1892
FspBI CTAG 5 cut(s) 200, 288, 930, 1347, 2064
GlaI GCGC 1 cut(s) 1648
GluI GCNGC 3 cut(s) 105, 294, 1892
GsuI CTGGAG 3 cut(s) 165, 885, 1610
HapII CCGG 3 cut(s) 409, 720, 1012
HgaI GACGC 3 cut(s) 32, 265, 648
HhaI GCGC 1 cut(s) 1649
Hin1I GRCGYC 3 cut(s) 43, 257, 640
Hin1II CATG 8 cut(s) 673, 782, 1113, 1443, 1517, 2167, 2201, 2216
Hin6I GCGC 1 cut(s) 1647
HinP1I GCGC 1 cut(s) 1647
HincII GTYRAC 2 cut(s) 466, 1977
HindII GTYRAC 2 cut(s) 466, 1977
HindIII AAGCTT 2 cut(s) 971, 1003
HpaII CCGG 3 cut(s) 409, 720, 1012
HphI GGTGA 2 cut(s) 1381, 1793
Hpy166II GTNNAC 5 cut(s) 466, 1117, 1473, 1495, 1977
Hpy188I TCNGA 6 cut(s) 417, 752, 969, 1028, 1554, 1769
Hpy8I GTNNAC 5 cut(s) 466, 1117, 1473, 1495, 1977
HpyAV CCTTC 7 cut(s) 294, 376, 576, 601, 955, 1063, 2064
HpyCH4III ACNGT 4 cut(s) 824, 911, 1130, 1212
HpyCH4IV ACGT 2 cut(s) 560, 2120
HpyF10VI GCNNNNNNNGC 3 cut(s) 40, 1320, 1943
HpyF3I CTNAG 6 cut(s) 414, 650, 841, 1605, 1788, 2097
HpySE526I ACGT 2 cut(s) 560, 2120
Hsp92I GRCGYC 3 cut(s) 43, 257, 640
Hsp92II CATG 8 cut(s) 673, 782, 1113, 1443, 1517, 2167, 2201, 2216
HspAI GCGC 1 cut(s) 1647
Kzo9I GATC 3 cut(s) 646, 964, 1636
LguI GCTCTTC 1 cut(s) 828
LmnI GCTCC 4 cut(s) 112, 623, 787, 1271
Lsp1109I GCAGC 3 cut(s) 91, 305, 1903
LweI GCATC 4 cut(s) 463, 861, 1732, 2069
MaeI CTAG 5 cut(s) 200, 288, 930, 1347, 2064
MaeII ACGT 2 cut(s) 560, 2120
MaeIII GTNAC 5 cut(s) 530, 774, 1164, 1424, 1629
MalI GATC 3 cut(s) 648, 966, 1638
MboI GATC 3 cut(s) 646, 964, 1636
MfeI CAATTG 2 cut(s) 1203, 1432
MflI RGATCY 1 cut(s) 1636
MhlI GDGCHC 4 cut(s) 628, 720, 840, 1541
MlsI TGGCCA 2 cut(s) 435, 915
MluNI TGGCCA 2 cut(s) 435, 915
MlyI GAGTC 3 cut(s) 32, 194, 822
MmeI TCCRAC 7 cut(s) 526, 541, 809, 1085, 1222, 1532, 1930
Mox20I TGGCCA 2 cut(s) 435, 915
Mph1103I ATGCAT 2 cut(s) 1445, 2062
MscI TGGCCA 2 cut(s) 435, 915
MseI TTAA 8 cut(s) 243, 306, 444, 1043, 1146, 1446, 1599, 1686
MslI CAYNNNNRTG 1 cut(s) 1518
Msp20I TGGCCA 2 cut(s) 435, 915
MspI CCGG 3 cut(s) 409, 720, 1012
MspR9I CCNGG 8 cut(s) 437, 621, 720, 809, 1013, 1170, 1422, 1779
MunI CAATTG 2 cut(s) 1203, 1432
Mva1269I GAATGC 1 cut(s) 349
MvaI CCWGG 6 cut(s) 437, 621, 809, 1170, 1422, 1779
MvnI CGCG 1 cut(s) 1647
MwoI GCNNNNNNNGC 3 cut(s) 40, 1320, 1943
NciI CCSGG 2 cut(s) 720, 1013
NdeI CATATG 1 cut(s) 1981
NdeII GATC 3 cut(s) 646, 964, 1636
NheI GCTAGC 1 cut(s) 929
NlaIII CATG 8 cut(s) 673, 782, 1113, 1443, 1517, 2167, 2201, 2216
NlaIV GGNNCC 4 cut(s) 625, 1638, 1806, 1998
NmuCI GTSAC 2 cut(s) 530, 1629
NsiI ATGCAT 2 cut(s) 1445, 2062
NspI RCATGY 3 cut(s) 782, 2167, 2201
NspV TTCGAA 1 cut(s) 893
PagI TCATGA 3 cut(s) 669, 1513, 2212
PceI AGGCCT 1 cut(s) 34
PciI ACATGT 1 cut(s) 2197
PciSI GCTCTTC 1 cut(s) 828
PctI GAATGC 1 cut(s) 349
PfeI GAWTC 8 cut(s) 539, 878, 890, 1106, 1372, 1555, 1784, 1861
PkrI GCNGC 3 cut(s) 106, 295, 1893
PleI GAGTC 3 cut(s) 31, 193, 821
PpsI GAGTC 3 cut(s) 31, 193, 821
PscI ACATGT 1 cut(s) 2197
PshBI ATTAAT 2 cut(s) 243, 444
PsiI TTATAA 1 cut(s) 1823
Psp6I CCWGG 6 cut(s) 435, 619, 807, 1168, 1420, 1777
PspEI GGTNACC 1 cut(s) 1164
PspGI CCWGG 6 cut(s) 435, 619, 807, 1168, 1420, 1777
PspN4I GGNNCC 4 cut(s) 625, 1638, 1806, 1998
PspPI GGNCC 5 cut(s) 134, 1322, 1523, 1804, 1996
PstI CTGCAG 1 cut(s) 1356
PstNI CAGNNNCTG 2 cut(s) 1274, 1385
PsuI RGATCY 1 cut(s) 1636
RsaI GTAC 2 cut(s) 826, 1753
RsaNI GTAC 2 cut(s) 825, 1752
RseI CAYNNNNRTG 1 cut(s) 1518
SapI GCTCTTC 1 cut(s) 828
SaqAI TTAA 8 cut(s) 243, 306, 444, 1043, 1146, 1446, 1599, 1686
SatI GCNGC 3 cut(s) 105, 294, 1892
Sau3AI GATC 3 cut(s) 646, 964, 1636
Sau96I GGNCC 5 cut(s) 134, 1322, 1523, 1804, 1996
SchI GAGTC 3 cut(s) 32, 194, 822
ScrFI CCNGG 8 cut(s) 437, 621, 720, 809, 1013, 1170, 1422, 1779
SduI GDGCHC 4 cut(s) 628, 720, 840, 1541
SfaNI GCATC 4 cut(s) 463, 861, 1732, 2069
SfcI CTRYAG 1 cut(s) 1352
SfuI TTCGAA 1 cut(s) 893
SinI GGWCC 2 cut(s) 1523, 1996
SmiMI CAYNNNNRTG 1 cut(s) 1518
SmlI CTYRAG 1 cut(s) 2001
SmoI CTYRAG 1 cut(s) 2001
SseBI AGGCCT 1 cut(s) 34
SsiI CCGC 5 cut(s) 267, 1627, 1645, 1946, 2040
SspI AATATT 1 cut(s) 1690
SspMI CTAG 5 cut(s) 200, 288, 930, 1347, 2064
StuI AGGCCT 1 cut(s) 34
StyD4I CCNGG 8 cut(s) 435, 619, 718, 807, 1011, 1168, 1420, 1777
StyI CCWWGG 2 cut(s) 395, 916
TaaI ACNGT 4 cut(s) 824, 911, 1130, 1212
TaiI ACGT 2 cut(s) 563, 2123
TaqI TCGA 5 cut(s) 310, 645, 893, 1036, 1558
TatI WGTACW 1 cut(s) 824
TfiI GAWTC 8 cut(s) 539, 878, 890, 1106, 1372, 1555, 1784, 1861
Tru1I TTAA 8 cut(s) 243, 306, 444, 1043, 1146, 1446, 1599, 1686
Tru9I TTAA 8 cut(s) 243, 306, 444, 1043, 1146, 1446, 1599, 1686
TscAI CASTG 6 cut(s) 720, 916, 1135, 1217, 1541, 1638
TseFI GTSAC 2 cut(s) 530, 1629
TseI GCWGC 3 cut(s) 104, 293, 1891
Tsp45I GTSAC 2 cut(s) 530, 1629
TspGWI ACGGA 4 cut(s) 16, 42, 156, 1985
TspRI CASTG 6 cut(s) 720, 916, 1135, 1217, 1541, 1638
VpaK11BI GGWCC 2 cut(s) 1523, 1996
VspI ATTAAT 2 cut(s) 243, 444
XapI RAATTY 2 cut(s) 1098, 1279
XbaI TCTAGA 1 cut(s) 2063
XceI RCATGY 3 cut(s) 782, 2167, 2201
XcmI CCANNNNNNNNNTGG 1 cut(s) 1884
XmiI GTMKAC 1 cut(s) 1472
XspI CTAG 5 cut(s) 200, 288, 930, 1347, 2064
Zsp2I ATGCAT 2 cut(s) 1445, 2062
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.