Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0010169

Physical Location & Seq

Genomic Coordinates Forward (+)

7392054 .. 7398239

Gene Structure 6186 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00391110.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2214 bp

ATGGAACACAGTTTAGGTCAAGACTCTATTCCTGGGTTTGGCTCATTTGATAAGTCTAGGGTTTTGGATGTAAGGCCTTTGAGGCGTCTTGTTCCTGTATTCCCCTCATCTTCTAGTAATTCTTCATTTTCGACACCCCAAGGTGCTGCTCCCTTTGTTTGTGCTTCTCCTGCCGGTCCTTTCCCACCTGGGGTTTCCCCATTTTTCCCCTTTTTCATTTCATCAGAGTCTCAAAGGCCGCTCGAACAAAATCTACAAACACCAAGTGGTATACCCAATGAGAACCAACCGTTTGGCTTCACTAATTCAATATCTAATGCAGTTCCAATAAATTCCTTTAGCAATCCTCCTCCACCCTCAACAGCTGGGGTAACCCCCCACCAGAGTACAGGAACTTCGAATGGAGGAGATACCACACCTTCGAGAAGGATTACTAGAAGTCGTGTCCAACCACAACCGCAACGTGGGGTTGCGGAGGAAGATGGTTTGAGCGAGAGTGTTGTTGTTGATGCAGAAAATACAAGGAGGGTTGGGAGGCCAAGGGGTAAGTTCCAGTCTCAAAAGAGGCCACGGGGTGGCCAGGACATTAATGTTGCCTTGCCTGATGTCGACATTGATGCAATAGTTGATAATGTTCTCACCTCATATACCAATACCTTGAGACAAACTGATGGCAACAAGGAATCAGTTGGATATGTACTCATGTGTTATGATCTGCTTCGAAGAAAGGTTTCACAAATTGAAGAGATGAAGGAAGGGATACCAGGAGTGTCGAGAACAGGACGCTCTGATCTAAGGGCTGGAACTCTCTTCATGAATAAGGGAATTAGGACAAATGCCCAAAAGAGGATTGGTACAGTGCCCGGTGTTGAAGTTGGGGATATTTTCTTTTTCCGAATGGAATTGTGCTTGGTTGGATTACACGCTCCAACTATGGGTGGGATTGATTATATGGGAGTCAAGAACAGTTCAGAGGAAGAGCCCTTAGCATTGAGCATTGTTTCTTCTGGAGGGTATGAGGATCATATACAGGATGGGAATGAGTTGATATATAGTGGCCAAGGTGGCAATGCCGGCAACGATAACAGGAAAGATAAGGAAACAAAGGATCAGAAGCTTGAAAGGGGTAATCTAGCTTTGGAGAAAAGTTTGCATCGGGGTAATGATGTAAGAGTAATTCGGGGTGTTAAGGATGTTTCTAATCCAACTGGGAAGGTATATGTCTATGACGGTCTATACAAAATCCATGAATCATGGGTAGATAAAGGAAAGAGTGGTGGCAATGTATTCAAGTACAGATTGGTAAGATTACCTGGACAGCCTGAAGCGTTTACAGTATGGAAATCAATTGAGCAATGGAAAGAAACAAATACTACAAGGGTTGGATTGATATTGCCAGATCTTACTTCAGGGGCAGAAACTTTTCCCGTTTCTCTTGTAAATGATGTAGATGGCGAGAAAGGCCCTGCACACTTCACATATATTCCTAGTCTTAAGTATTCAAAACCTGTTAATCTTACAGAACCCACTGCTGGGTGTAATTGTACTGGTGGATGTCTCCCTGGTAATTCCAACTGCCCTTGCATTCAGAAAAATGGAGGTTATCTCCCATATACTGCAAATGGGCTTCTTGTGAACCAAAAATCCTTATTACATGAATGTGGTCCTTCCTGCACATGCCCTCCTAATTGTCGTAATCGTGTGTCCCAAGGTGGCTTGAAAATTCGTTTGGAAGTGTTTAAGACTAAGGATAAAGGTTGGGGTTTGAGGTCCTGGGATCCCATCCGTGCTGGTGCTTTCTTATGCGAGTATGCAGGGGAAACTCTAAATGTTTCTGGTATAGAAAAGCTTGGGGATGACCGTGCAACTGATTACAGTTTTGATGCTAATCGTACTTGTCAGCCACTGGGAGTTCTGCCTGGTGATTCTAATGAGACACCAAATGTCCCTTTTCCTCTACTTATAAGTGCAAATACTGCTGGAAATGTTGCTCGCTTTATGAATCACAGCTGTTCTCCAAATGTGTTCTGGCAACCAATTTTACGTGAAAATAAAAATGAATCTGATTTACATGTTGCGTTTTATGCGGTTGGACACATTCCTCCTATGACAGAGTTGACTTATGATTATGGGATGATCCCTTATGAGAAAGCATACCAGAGGAAGAAAATATGCCTTTGTGGGTCAATAAAGTGTAGAAGCTTCTTTTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00260 ko00310 ko01100 ko04146 ko04211 map00260 map00310 map01100 map04146 map04211

Pfam Domains

Protein Families

AT_hook Pre-SET SAD_SRA SET

Protein Analysis

737

Amino Acids

80.54

Weight (kDa)

8.29

Isoelectric Point (pI)

46.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAD_SRA	PF02182	283 - 440	2.8e-55	SAD/SRA domain
Pre-SET	PF05033	470 - 567	2.7e-23	Pre-SET motif
SET	PF00856	586 - 711	1.9e-17	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010169)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G05900
fragaria_vesca	FvH4_7g07980
malus_domestica	MD00G1068300.v1.1 MD12G1112200.v1.1 MD14G1101300.v1.1
prunus_persica	Prupe.7G021100_v2.0.a1 Prupe.7G021100_v2.0.a1
pyrus_communis	pycom12g09140 pycom14g08780
rosa_chinensis	RchiOBHm_Chr3g0494321 RchiOBHm_Chr3g0494471
rosa_laevigata	RLG00000022673
rosa_multiflora	Rmu_sc0000152.1_g000010
rosa_roxburghii	Rroxscaffold_6G00391110
rosa_rugosa	Rorug03G0265400
rosa_samantha	Rh3AG314800 Rh3AG315600 Rh3BG350800 Rh3CG347500 Rh3DG350100
rosa_wichuraiana	Rw3G027550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1964
AccB7I	CCANNNNNTGG	1 cut(s)	575
AccBSI	CCGCTC	1 cut(s)	241
AccI	GTMKAC	2 cut(s)	271, 609
AciI	CCGC	4 cut(s)	239, 458, 473, 2087
AclWI	GGATC	5 cut(s)	1029, 1116, 1772, 1785, 2131
AcoI	YGGCCR	2 cut(s)	577, 1057
AcsI	RAATTY	2 cut(s)	331, 1722
AcuI	CTGAAG	2 cut(s)	1344, 1392
AcyI	GRCGYC	1 cut(s)	85
AdeI	CACNNNGTG	2 cut(s)	266, 575
AfaI	GTAC	6 cut(s)	388, 699, 856, 1295, 1546, 1894
AfiI	CCNNNNNNNGG	8 cut(s)	38, 190, 464, 575, 846, 935, 1532, 1533
AflII	CTTAAG	1 cut(s)	1493
AflIII	ACRYGT	1 cut(s)	2071
AgsI	TTSAA	7 cut(s)	309, 743, 872, 1121, 1291, 1503, 1720
AjnI	CCWGG	8 cut(s)	31, 187, 579, 763, 1312, 1561, 1772, 1918
AjuI	GAANNNNNNNTTGG	2 cut(s)	1712, 1744
AloI	GAACNNNNNNTCC	2 cut(s)	1628, 1660
AluBI	AGCT	6 cut(s)	365, 1117, 1136, 1849, 2010, 2202
AluI	AGCT	6 cut(s)	365, 1117, 1136, 1849, 2010, 2202
Alw26I	GTCTC	5 cut(s)	234, 561, 655, 1562, 1928
AlwI	GGATC	5 cut(s)	1029, 1116, 1772, 1785, 2131
AlwNI	CAGNNNCTG	1 cut(s)	1906
AoxI	GGCC	7 cut(s)	74, 236, 536, 566, 577, 1057, 1462
ApeKI	GCWGC	1 cut(s)	146
ApoI	RAATTY	2 cut(s)	331, 1722
AseI	ATTAAT	1 cut(s)	588
Asp700I	GAANNNNTTC	2 cut(s)	730, 1422
AspS9I	GGNCC	4 cut(s)	176, 1463, 1664, 1770
AsuC2I	CCSGG	1 cut(s)	864
AsuHPI	GGTGA	2 cut(s)	631, 1934
AsuII	TTCGAA	2 cut(s)	398, 721
AvaII	GGWCC	3 cut(s)	176, 1664, 1770
BaeGI	GKGCMC	1 cut(s)	864
BalI	TGGCCA	2 cut(s)	579, 1059
BamHI	GGATCC	1 cut(s)	1777
BanII	GRGCYC	1 cut(s)	984
BarI	GAAGNNNNNNTAC	2 cut(s)	379, 411
BbvI	GCAGC	1 cut(s)	133
BccI	CCATC	5 cut(s)	476, 665, 1028, 1445, 1790
BcgI	CGANNNNNNTGC	2 cut(s)	599, 633
BciT130I	CCWGG	8 cut(s)	33, 189, 581, 765, 1314, 1563, 1774, 1920
BciVI	GTATCC	1 cut(s)	753
BcnI	CCSGG	1 cut(s)	864
BcoDI	GTCTC	5 cut(s)	234, 561, 655, 1562, 1928
BfaI	CTAG	5 cut(s)	57, 114, 435, 1133, 1488
BfrI	CTTAAG	1 cut(s)	1493
BfuI	GTATCC	1 cut(s)	753
BglI	GCCNNNNNGGC	2 cut(s)	82, 1065
BglII	AGATCT	1 cut(s)	1399
BisI	GCNGC	2 cut(s)	147, 239
BlsI	GCNGC	2 cut(s)	148, 240
Bme1390I	CCNGG	9 cut(s)	33, 189, 581, 765, 864, 1314, 1563, 1774, 1920
Bme18I	GGWCC	3 cut(s)	176, 1664, 1770
BmgT120I	GGNCC	4 cut(s)	176, 1463, 1664, 1770
BmiI	GGNNCC	1 cut(s)	1779
BmrFI	CCNGG	9 cut(s)	33, 189, 581, 765, 864, 1314, 1563, 1774, 1920
BmrI	ACTGGG	2 cut(s)	1218, 1916
BmsI	GCATC	4 cut(s)	499, 607, 1162, 1873
BmuI	ACTGGG	2 cut(s)	1218, 1916
BplI	GAGNNNNNCTC	2 cut(s)	1590, 1622
BpmI	CTGGAG	1 cut(s)	1029
Bpu10I	CCTNAGC	1 cut(s)	985
Bpu14I	TTCGAA	2 cut(s)	398, 721
BpuEI	CTTGAG	1 cut(s)	679
BpuMI	CCSGG	1 cut(s)	864
BsaAI	YACGTR	1 cut(s)	2045
BsaBI	GATNNNNATC	1 cut(s)	1887
BsaHI	GRCGYC	1 cut(s)	85
BsaJI	CCNNGG	9 cut(s)	32, 139, 188, 539, 569, 1060, 1561, 1708, 1773
BsaXI	ACNNNNNCTCC	2 cut(s)	1666, 1696
Bsc4I	CCNNNNNNNGG	8 cut(s)	38, 190, 464, 575, 846, 935, 1532, 1533
Bse118I	RCCGGY	2 cut(s)	173, 1073
Bse1I	ACTGG	4 cut(s)	553, 1213, 1552, 1911
Bse3DI	GCAATG	3 cut(s)	1075, 1288, 1361
Bse8I	GATNNNNATC	1 cut(s)	1887
BseBI	CCWGG	8 cut(s)	33, 189, 581, 765, 1314, 1563, 1774, 1920
BseDI	CCNNGG	9 cut(s)	32, 139, 188, 539, 569, 1060, 1561, 1708, 1773
BseGI	GGATG	7 cut(s)	73, 1039, 1198, 1559, 1782, 1861, 2139
BseJI	GATNNNNATC	1 cut(s)	1887
BseLI	CCNNNNNNNGG	8 cut(s)	38, 190, 464, 575, 846, 935, 1532, 1533
BseMI	GCAATG	3 cut(s)	1075, 1288, 1361
BseNI	ACTGG	4 cut(s)	553, 1213, 1552, 1911
BseRI	GAGGAG	2 cut(s)	339, 420
BseSI	GKGCMC	1 cut(s)	864
BseXI	GCAGC	1 cut(s)	133
BseYI	CCCAGC	2 cut(s)	365, 1532
BsgI	GTGCAG	2 cut(s)	1452, 1657
BshFI	GGCC	7 cut(s)	76, 238, 538, 568, 579, 1059, 1464
BsiSI	CCGG	3 cut(s)	174, 864, 1074
BslFI	GGGAC	2 cut(s)	1690, 1931
BslI	CCNNNNNNNGG	8 cut(s)	38, 190, 464, 575, 846, 935, 1532, 1533
BsmAI	GTCTC	5 cut(s)	234, 561, 655, 1562, 1928
BsmFI	GGGAC	2 cut(s)	1690, 1931
BsmI	GAATGC	1 cut(s)	1584
BsnI	GGCC	7 cut(s)	76, 238, 538, 568, 579, 1059, 1464
Bsp119I	TTCGAA	2 cut(s)	398, 721
Bsp1286I	GDGCHC	2 cut(s)	864, 984
Bsp143I	GATC	7 cut(s)	712, 790, 1021, 1108, 1399, 1777, 2136
BspACI	CCGC	4 cut(s)	239, 458, 473, 2087
BspANI	GGCC	7 cut(s)	76, 238, 538, 568, 579, 1059, 1464
BspHI	TCATGA	1 cut(s)	813
BspLI	GGNNCC	1 cut(s)	1779
BspPI	GGATC	5 cut(s)	1029, 1116, 1772, 1785, 2131
BspQI	GCTCTTC	1 cut(s)	972
BspT104I	TTCGAA	2 cut(s)	398, 721
BspTI	CTTAAG	1 cut(s)	1493
BsrBI	CCGCTC	1 cut(s)	241
BsrDI	GCAATG	3 cut(s)	1075, 1288, 1361
BsrFI	RCCGGY	2 cut(s)	173, 1073
BsrI	ACTGG	4 cut(s)	553, 1213, 1552, 1911
BssAI	RCCGGY	2 cut(s)	173, 1073
BssECI	CCNNGG	9 cut(s)	32, 139, 188, 539, 569, 1060, 1561, 1708, 1773
BssMI	GATC	7 cut(s)	712, 790, 1021, 1108, 1399, 1777, 2136
BssNAI	GTATAC	1 cut(s)	272
BssNI	GRCGYC	1 cut(s)	85
BssT1I	CCWWGG	4 cut(s)	139, 539, 1060, 1708
Bst1107I	GTATAC	1 cut(s)	272
Bst2UI	CCWGG	8 cut(s)	33, 189, 581, 765, 1314, 1563, 1774, 1920
Bst4CI	ACNGT	8 cut(s)	11, 291, 859, 968, 1232, 1336, 1862, 1877
Bst6I	CTCTTC	3 cut(s)	738, 815, 972
BstACI	GRCGYC	1 cut(s)	85
BstAFI	CTTAAG	1 cut(s)	1493
BstAPI	GCANNNNNTGC	1 cut(s)	1976
BstBAI	YACGTR	1 cut(s)	2045
BstBI	TTCGAA	2 cut(s)	398, 721
BstC8I	GCNNGC	2 cut(s)	1075, 1993
BstDEI	CTNAG	3 cut(s)	794, 985, 1746
BstDSI	CCRYGG	1 cut(s)	569
BstEII	GGTNACC	1 cut(s)	370
BstF5I	GGATG	7 cut(s)	73, 1039, 1198, 1559, 1782, 1861, 2139
BstKTI	GATC	7 cut(s)	715, 793, 1024, 1111, 1402, 1780, 2139
BstMAI	GTCTC	5 cut(s)	234, 561, 655, 1562, 1928
BstMBI	GATC	7 cut(s)	712, 790, 1021, 1108, 1399, 1777, 2136
BstMWI	GCNNNNNNNGC	7 cut(s)	82, 170, 1065, 1074, 1461, 1976, 2084
BstNI	CCWGG	8 cut(s)	33, 189, 581, 765, 1314, 1563, 1774, 1920
BstNSI	RCATGY	2 cut(s)	1680, 2075
BstPI	GGTNACC	1 cut(s)	370
BstSCI	CCNGG	9 cut(s)	31, 187, 579, 763, 862, 1312, 1561, 1772, 1918
BstSLI	GKGCMC	1 cut(s)	864
BstV1I	GCAGC	1 cut(s)	133
BstX2I	RGATCY	2 cut(s)	1399, 1777
BstXI	CCANNNNNNTGG	1 cut(s)	293
BstYI	RGATCY	2 cut(s)	1399, 1777
BstZ17I	GTATAC	1 cut(s)	272
BsuI	GTATCC	1 cut(s)	753
BsuRI	GGCC	7 cut(s)	76, 238, 538, 568, 579, 1059, 1464
BtgI	CCRYGG	1 cut(s)	569
BtsCI	GGATG	7 cut(s)	73, 1039, 1198, 1559, 1782, 1861, 2139
BtsI	GCAGTG	1 cut(s)	1527
BtsIMutI	CAGTG	3 cut(s)	864, 1527, 1904
Cac8I	GCNNGC	2 cut(s)	1075, 1993
CaiI	CAGNNNCTG	1 cut(s)	1906
CciI	TCATGA	1 cut(s)	813
Cfr10I	RCCGGY	2 cut(s)	173, 1073
Cfr13I	GGNCC	4 cut(s)	176, 1463, 1664, 1770
CseI	GACGC	2 cut(s)	74, 792
Csp6I	GTAC	6 cut(s)	387, 698, 855, 1294, 1545, 1893
CviAII	CATG	7 cut(s)	703, 814, 1247, 1254, 1655, 1677, 2072
CviQI	GTAC	6 cut(s)	387, 698, 855, 1294, 1545, 1893
DdeI	CTNAG	3 cut(s)	794, 985, 1746
DpnI	GATC	7 cut(s)	714, 792, 1023, 1110, 1401, 1779, 2138
DpnII	GATC	7 cut(s)	712, 790, 1021, 1108, 1399, 1777, 2136
DraIII	CACNNNGTG	2 cut(s)	266, 575
EaeI	YGGCCR	2 cut(s)	577, 1057
Eam1104I	CTCTTC	3 cut(s)	738, 815, 972
EarI	CTCTTC	3 cut(s)	738, 815, 972
Eco130I	CCWWGG	4 cut(s)	139, 539, 1060, 1708
Eco147I	AGGCCT	1 cut(s)	76
Eco24I	GRGCYC	1 cut(s)	984
Eco47I	GGWCC	3 cut(s)	176, 1664, 1770
Eco57I	CTGAAG	2 cut(s)	1344, 1392
Eco91I	GGTNACC	1 cut(s)	370
EcoO109I	RGGNCCY	2 cut(s)	1463, 1770
EcoO65I	GGTNACC	1 cut(s)	370
EcoRII	CCWGG	8 cut(s)	31, 187, 579, 763, 1312, 1561, 1772, 1918
EcoT14I	CCWWGG	4 cut(s)	139, 539, 1060, 1708
EcoT38I	GRGCYC	1 cut(s)	984
ErhI	CCWWGG	4 cut(s)	139, 539, 1060, 1708
FaeI	CATG	7 cut(s)	706, 817, 1250, 1257, 1658, 1680, 2075
FaqI	GGGAC	2 cut(s)	1690, 1931
FatI	CATG	7 cut(s)	702, 813, 1246, 1253, 1654, 1676, 2071
FblI	GTMKAC	2 cut(s)	271, 609
Fnu4HI	GCNGC	2 cut(s)	147, 239
FokI	GGATG	7 cut(s)	80, 1046, 1205, 1566, 1769, 1868, 2146
FriOI	GRGCYC	1 cut(s)	984
Fsp4HI	GCNGC	2 cut(s)	147, 239
FspBI	CTAG	5 cut(s)	57, 114, 435, 1133, 1488
GluI	GCNGC	2 cut(s)	147, 239
GsaI	CCCAGC	2 cut(s)	369, 1536
GsuI	CTGGAG	1 cut(s)	1029
HaeIII	GGCC	7 cut(s)	76, 238, 538, 568, 579, 1059, 1464
HapII	CCGG	3 cut(s)	174, 864, 1074
HgaI	GACGC	2 cut(s)	74, 792
Hin1I	GRCGYC	1 cut(s)	85
Hin1II	CATG	7 cut(s)	706, 817, 1250, 1257, 1658, 1680, 2075
HincII	GTYRAC	2 cut(s)	610, 2118
HindII	GTYRAC	2 cut(s)	610, 2118
HindIII	AAGCTT	3 cut(s)	1115, 1847, 2200
HinfI	GANTC	8 cut(s)	23, 227, 683, 957, 1250, 1925, 2002, 2060
HpaII	CCGG	3 cut(s)	174, 864, 1074
HphI	GGTGA	2 cut(s)	631, 1934
Hpy166II	GTNNAC	5 cut(s)	272, 610, 1332, 1636, 2118
Hpy188I	TCNGA	7 cut(s)	226, 790, 896, 973, 1113, 1590, 2065
Hpy188III	TCNNGA	6 cut(s)	20, 423, 774, 814, 961, 1008
Hpy8I	GTNNAC	5 cut(s)	272, 610, 1332, 1636, 2118
HpyAV	CCTTC	6 cut(s)	420, 429, 745, 749, 1207, 1677
HpyCH4III	ACNGT	8 cut(s)	11, 291, 859, 968, 1232, 1336, 1862, 1877
HpyCH4IV	ACGT	2 cut(s)	463, 2044
HpyF10VI	GCNNNNNNNGC	7 cut(s)	82, 170, 1065, 1074, 1461, 1976, 2084
HpyF3I	CTNAG	3 cut(s)	794, 985, 1746
HpySE526I	ACGT	2 cut(s)	463, 2044
Hsp92I	GRCGYC	1 cut(s)	85
Hsp92II	CATG	7 cut(s)	706, 817, 1250, 1257, 1658, 1680, 2075
KroI	GCCGGC	1 cut(s)	1073
KroNI	GCCGGC	1 cut(s)	1075
Kzo9I	GATC	7 cut(s)	712, 790, 1021, 1108, 1399, 1777, 2136
LguI	GCTCTTC	1 cut(s)	972
LmnI	GCTCC	2 cut(s)	154, 931
Lsp1109I	GCAGC	1 cut(s)	133
LweI	GCATC	4 cut(s)	499, 607, 1162, 1873
MaeI	CTAG	5 cut(s)	57, 114, 435, 1133, 1488
MaeII	ACGT	2 cut(s)	463, 2044
MaeIII	GTNAC	1 cut(s)	370
MalI	GATC	7 cut(s)	714, 792, 1023, 1110, 1401, 1779, 2138
MbiI	CCGCTC	1 cut(s)	241
MboI	GATC	7 cut(s)	712, 790, 1021, 1108, 1399, 1777, 2136
MboII	GAAGA	9 cut(s)	102, 114, 491, 735, 755, 802, 989, 996, 2176
MfeI	CAATTG	1 cut(s)	1347
MflI	RGATCY	2 cut(s)	1399, 1777
MhlI	GDGCHC	2 cut(s)	864, 984
MlsI	TGGCCA	2 cut(s)	579, 1059
MluNI	TGGCCA	2 cut(s)	579, 1059
MlyI	GAGTC	3 cut(s)	17, 236, 966
MmeI	TCCRAC	8 cut(s)	472, 670, 895, 953, 1229, 1363, 1596, 2071
Mox20I	TGGCCA	2 cut(s)	579, 1059
MroNI	GCCGGC	1 cut(s)	1073
MroXI	GAANNNNTTC	2 cut(s)	730, 1422
MscI	TGGCCA	2 cut(s)	579, 1059
MseI	TTAA	5 cut(s)	588, 1188, 1494, 1512, 1740
MslI	CAYNNNNRTG	1 cut(s)	1659
Msp20I	TGGCCA	2 cut(s)	579, 1059
MspA1I	CMGCKG	2 cut(s)	365, 2010
MspCI	CTTAAG	1 cut(s)	1493
MspI	CCGG	3 cut(s)	174, 864, 1074
MspR9I	CCNGG	9 cut(s)	33, 189, 581, 765, 864, 1314, 1563, 1774, 1920
MunI	CAATTG	1 cut(s)	1347
Mva1269I	GAATGC	1 cut(s)	1584
MvaI	CCWGG	8 cut(s)	33, 189, 581, 765, 1314, 1563, 1774, 1920
MwoI	GCNNNNNNNGC	7 cut(s)	82, 170, 1065, 1074, 1461, 1976, 2084
NaeI	GCCGGC	1 cut(s)	1075
NciI	CCSGG	1 cut(s)	864
NdeII	GATC	7 cut(s)	712, 790, 1021, 1108, 1399, 1777, 2136
NgoMIV	GCCGGC	1 cut(s)	1073
NlaIII	CATG	7 cut(s)	706, 817, 1250, 1257, 1658, 1680, 2075
NlaIV	GGNNCC	1 cut(s)	1779
NspI	RCATGY	2 cut(s)	1680, 2075
NspV	TTCGAA	2 cut(s)	398, 721
PagI	TCATGA	1 cut(s)	813
PceI	AGGCCT	1 cut(s)	76
PciI	ACATGT	1 cut(s)	2071
PciSI	GCTCTTC	1 cut(s)	972
PctI	GAATGC	1 cut(s)	1584
PdiI	GCCGGC	1 cut(s)	1075
PdmI	GAANNNNTTC	2 cut(s)	730, 1422
PfeI	GAWTC	5 cut(s)	683, 1250, 1925, 2002, 2060
PflMI	CCANNNNNTGG	1 cut(s)	575
PkrI	GCNGC	2 cut(s)	148, 240
PleI	GAGTC	3 cut(s)	17, 235, 965
PpsI	GAGTC	3 cut(s)	17, 235, 965
Ppu21I	YACGTR	1 cut(s)	2045
PpuMI	RGGWCCY	1 cut(s)	1770
PscI	ACATGT	1 cut(s)	2071
PshBI	ATTAAT	1 cut(s)	588
PsiI	TTATAA	1 cut(s)	1964
Psp5II	RGGWCCY	1 cut(s)	1770
Psp6I	CCWGG	8 cut(s)	31, 187, 579, 763, 1312, 1561, 1772, 1918
PspEI	GGTNACC	1 cut(s)	370
PspFI	CCCAGC	2 cut(s)	365, 1532
PspGI	CCWGG	8 cut(s)	31, 187, 579, 763, 1312, 1561, 1772, 1918
PspN4I	GGNNCC	1 cut(s)	1779
PspPI	GGNCC	4 cut(s)	176, 1463, 1664, 1770
PspPPI	RGGWCCY	1 cut(s)	1770
PsrI	GAACNNNNNNTAC	2 cut(s)	237, 269
PstNI	CAGNNNCTG	1 cut(s)	1906
PsuI	RGATCY	2 cut(s)	1399, 1777
PvuII	CAGCTG	2 cut(s)	365, 2010
RsaI	GTAC	6 cut(s)	388, 699, 856, 1295, 1546, 1894
RsaNI	GTAC	6 cut(s)	387, 698, 855, 1294, 1545, 1893
RseI	CAYNNNNRTG	1 cut(s)	1659
SalI	GTCGAC	1 cut(s)	608
SapI	GCTCTTC	1 cut(s)	972
SaqAI	TTAA	5 cut(s)	588, 1188, 1494, 1512, 1740
SatI	GCNGC	2 cut(s)	147, 239
Sau3AI	GATC	7 cut(s)	712, 790, 1021, 1108, 1399, 1777, 2136
Sau96I	GGNCC	4 cut(s)	176, 1463, 1664, 1770
SchI	GAGTC	3 cut(s)	17, 236, 966
ScrFI	CCNGG	9 cut(s)	33, 189, 581, 765, 864, 1314, 1563, 1774, 1920
SduI	GDGCHC	2 cut(s)	864, 984
SfaNI	GCATC	4 cut(s)	499, 607, 1162, 1873
SfuI	TTCGAA	2 cut(s)	398, 721
SinI	GGWCC	3 cut(s)	176, 1664, 1770
SmiMI	CAYNNNNRTG	1 cut(s)	1659
SmlI	CTYRAG	2 cut(s)	658, 1493
SmoI	CTYRAG	2 cut(s)	658, 1493
SseBI	AGGCCT	1 cut(s)	76
SsiI	CCGC	4 cut(s)	239, 458, 473, 2087
SspMI	CTAG	5 cut(s)	57, 114, 435, 1133, 1488
StuI	AGGCCT	1 cut(s)	76
StyD4I	CCNGG	9 cut(s)	31, 187, 579, 763, 862, 1312, 1561, 1772, 1918
StyI	CCWWGG	4 cut(s)	139, 539, 1060, 1708
TaaI	ACNGT	8 cut(s)	11, 291, 859, 968, 1232, 1336, 1862, 1877
TaiI	ACGT	2 cut(s)	466, 2047
TaqI	TCGA	7 cut(s)	131, 243, 398, 422, 609, 721, 773
TatI	WGTACW	4 cut(s)	386, 697, 1293, 1544
TauI	GCSGC	1 cut(s)	241
TfiI	GAWTC	5 cut(s)	683, 1250, 1925, 2002, 2060
Tru1I	TTAA	5 cut(s)	588, 1188, 1494, 1512, 1740
Tru9I	TTAA	5 cut(s)	588, 1188, 1494, 1512, 1740
TscAI	CASTG	3 cut(s)	864, 1534, 1911
TseI	GCWGC	1 cut(s)	146
TspGWI	ACGGA	1 cut(s)	1775
TspRI	CASTG	3 cut(s)	864, 1534, 1911
Van91I	CCANNNNNTGG	1 cut(s)	575
Vha464I	CTTAAG	1 cut(s)	1493
VpaK11BI	GGWCC	3 cut(s)	176, 1664, 1770
VspI	ATTAAT	1 cut(s)	588
XapI	RAATTY	2 cut(s)	331, 1722
XceI	RCATGY	2 cut(s)	1680, 2075
XcmI	CCANNNNNNNNNTGG	2 cut(s)	848, 2025
XmiI	GTMKAC	2 cut(s)	271, 609
XmnI	GAANNNNTTC	2 cut(s)	730, 1422
XspI	CTAG	5 cut(s)	57, 114, 435, 1133, 1488

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.