Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0010169

Physical Location & Seq

Genomic Coordinates Forward (+)

7290813 .. 7293011

Gene Structure 2199 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000022673

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2199 bp

ATGGAACACAGTTTAGGTCAAGACTCTATTCCTGGGTTTGGGTCATTTGATAAGTCTAGGGTTTTGGATGTAAGGCCTTTGAGGCGTCTTGTTCCTGTATTCCCCTCAGCTTCTAGTAATTCTTCATTTTCAACACCCCAAGGTGCTGCTCCTTTTGTTTGTGCTTCTCCTGCTGGTCCTTTCCCACCTGGGGTTTCCCCATTTTTCCCCTTTTTCATTTCATCAGAGTCTCAAAGGCCGCTCGAACAAAATCTACAAACACCAAGTGGTGAGAACCAACCGTTTGGCTTCACTACCCATTCAATATCTAATGCAGTTCCAATAAATTCCTTTAGGAATCCTCCTCCACCCTCAACAGCTGGGGTAACCCCCAACCACAGTACAGGAACTTCGAATGGAGGAGATGCTACACCTTCGAGAAGGATTACCAGAAGTCGTGTCCAACCACAACCGCAACGTGGGGTTGTGGAGGAAGATGGTTTGAGCGAGAGTGTGGTTGATGCAGAAAATACAAGGAGGGTCGGGAGGCCAAAGGGTAAGTTCCAGTCTCAAAAGAGGACACGGGGTGGCCAGGACATTAATGTTGCCTTGCCTGATGTCGACATTGATGCAATAGTTGATAATGTTCTCACCTCATATACCAATACCTTGAGACAAACTGATGACAACTCAGTTGGATATGTACTCATTTGTTATGATCTGCTACGAAGAAAGATTTCACAAATTGAAGAGATGAAGGAAGGGATACCAGGAGTGTCGAGAACAGGACGCTCTGATCTAAGGGCTGGAACTCTCTTCATGAATAAGGGAATTAGGACAAATGCCCAAAAGAGGATTGGTACAGTGCCCGGTGTTGAAGTTGGGGATATTTTCTTTTTCCGAATGGAATTGTGCTTGGTTGGATTACATGCTCCAACTATGGGTGGGATTGATTATATGGGAGTCAAGAACAGTTCAGAGGAAGAGCCCTTAGCATTGAGCATTGTTTCTTCTGGAGGGTATGAGGATCATATACAGGATGGGAATGAGTTGATATATAGTGGCCAAGGTGGCAATGCGAGCAACGATAACAGGAAAGATAAGGAAACAAAGGATCAGAAGCTTGAAAGGGGTAATCTAGCTTTGGAGAAAAGTTTGCATCGGGGTAATGATGTAAGAGTAATTCGGGGTGTTAAGGATGTTTCTAATCCAACTGGGAAGGTATATGTCTATGATGGTCTATACAAAATCCATGAATCATGGGTAGATAAAGGAAAGAGTGGTGGCAATGTATTCAAGTACAGATTGGTAAGATTACCTGGACAGCCTGAAGCGTTTACAGTATGGAAATCAATTGAGCAATGGAAAGAAACAAATACCGCAAGGGTTGGATTGATATTGCCAGATCTTACTTCAGGGGCAGAAACTTTTCCCGTTTCTCTTGTAAATGACGTAGATGGCGAGAAAGGCCCTGCACACTTCACATATATTCCTAGTCTTAAGTATTCAAAATCTGTTAATCTTACAGAACCTACTGCTGGGTGTAATTGTACCAGTGGATGTCTTCCTGGTAATTCCAACTGCCCTTGCATTCAGAAAAATGGAGGTTATCTCCCATATACTGCAAATGGGCTTCTTGTGAACCAAAAATCCTTATTACATGAATGTGGTCCTTCCTGCGCATGCCCTCCTAATTGTCGTAATCGTGTGTCCCAAGGTGGCTTGAAAATTCGTTTGGAAGTGTTTAAGACTAAGGATAAAGGTTGGGGTTTGAGGTCCTGGGATCCCATCCGTGCTGGTGCTTTCTTATGTGAGTATGCAGGGGAAGCTCTAAATGTTTCTGGTATAGAAAAGCTTGGGGATGACCGTGCAGATGATTACAGTTTTGATGCTAATCGTACTTGTCAGCCACTGGGAGTTCTGCCTGGTGATTCTAATGAGACTCCAAATGTCCCTTTTCCTCTACTTATAACTGCAAATACTGCTGGAAATGTTGCTCGCTTTATGAATCACAGCTGTTCTCCAAATGTGTTCTGGCAACCAATTTTACGTGAAAATAAAAATGAATCTGATTTACATGTTGCGTTTTATGCGGTTGGACACATTCCTCCTATGACAGAGTTGACTTATGATTATGGGATGATCCCTTATGAGAAAGCATACCAGAGGAAGAAAATATGCCTTTGTGGGTCAATAAAGTGTAGAAGCTTCTTTTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00260 ko00310 ko01100 ko04146 ko04211 map00260 map00310 map01100 map04146 map04211

Pfam Domains

Protein Families

AT_hook Pre-SET SAD_SRA SET

Protein Analysis

733

Amino Acids

80.04

Weight (kDa)

8.16

Isoelectric Point (pI)

45.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAD_SRA	PF02182	278 - 435	1.8e-55	SAD/SRA domain
Pre-SET	PF05033	465 - 562	1.9e-23	Pre-SET motif
SET	PF00856	581 - 706	2.2e-17	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010169)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G05900
fragaria_vesca	FvH4_7g07980
malus_domestica	MD00G1068300.v1.1 MD12G1112200.v1.1 MD14G1101300.v1.1
prunus_persica	Prupe.7G021100_v2.0.a1 Prupe.7G021100_v2.0.a1
pyrus_communis	pycom12g09140 pycom14g08780
rosa_chinensis	RchiOBHm_Chr3g0494321 RchiOBHm_Chr3g0494471
rosa_laevigata	RLG00000022673
rosa_multiflora	Rmu_sc0000152.1_g000010
rosa_roxburghii	Rroxscaffold_6G00391110
rosa_rugosa	Rorug03G0265400
rosa_samantha	Rh3AG314800 Rh3AG315600 Rh3BG350800 Rh3CG347500 Rh3DG350100
rosa_wichuraiana	Rw3G027550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1949
Acc16I	TGCGCA	1 cut(s)	1660
AccBSI	CCGCTC	1 cut(s)	241
AccI	GTMKAC	1 cut(s)	600
AciI	CCGC	4 cut(s)	239, 452, 1359, 2072
AclWI	GGATC	5 cut(s)	1014, 1101, 1757, 1770, 2116
AcoI	YGGCCR	2 cut(s)	568, 1042
AcsI	RAATTY	2 cut(s)	325, 1707
AcuI	CTGAAG	2 cut(s)	1329, 1377
AcyI	GRCGYC	1 cut(s)	85
AdeI	CACNNNGTG	2 cut(s)	266, 566
AfaI	GTAC	6 cut(s)	382, 684, 841, 1280, 1531, 1879
AfiI	CCNNNNNNNGG	6 cut(s)	38, 190, 458, 831, 920, 1517
AflII	CTTAAG	1 cut(s)	1478
AflIII	ACRYGT	1 cut(s)	2056
AgsI	TTSAA	8 cut(s)	132, 303, 728, 857, 1106, 1276, 1488, 1705
AjnI	CCWGG	8 cut(s)	31, 187, 570, 748, 1297, 1546, 1757, 1903
AjuI	GAANNNNNNNTTGG	2 cut(s)	1697, 1729
AloI	GAACNNNNNNTCC	2 cut(s)	1613, 1645
AluBI	AGCT	8 cut(s)	110, 359, 1102, 1121, 1808, 1834, 1995, 2187
AluI	AGCT	8 cut(s)	110, 359, 1102, 1121, 1808, 1834, 1995, 2187
Alw26I	GTCTC	4 cut(s)	234, 552, 646, 1913
AlwI	GGATC	5 cut(s)	1014, 1101, 1757, 1770, 2116
AlwNI	CAGNNNCTG	1 cut(s)	1891
AoxI	GGCC	6 cut(s)	74, 236, 527, 568, 1042, 1447
ApeKI	GCWGC	1 cut(s)	146
ApoI	RAATTY	2 cut(s)	325, 1707
AseI	ATTAAT	1 cut(s)	579
Asp700I	GAANNNNTTC	2 cut(s)	715, 1407
AspLEI	GCGC	1 cut(s)	1661
AspS9I	GGNCC	4 cut(s)	176, 1448, 1649, 1755
AsuC2I	CCSGG	1 cut(s)	849
AsuHPI	GGTGA	3 cut(s)	281, 622, 1919
AsuII	TTCGAA	1 cut(s)	392
AvaII	GGWCC	3 cut(s)	176, 1649, 1755
BaeGI	GKGCMC	1 cut(s)	849
BalI	TGGCCA	2 cut(s)	570, 1044
BamHI	GGATCC	1 cut(s)	1762
BanII	GRGCYC	1 cut(s)	969
BarI	GAAGNNNNNNTAC	2 cut(s)	373, 405
BbsI	GAAGAC	1 cut(s)	1535
BbvCI	CCTCAGC	1 cut(s)	106
BbvI	GCAGC	1 cut(s)	133
BccI	CCATC	5 cut(s)	470, 1013, 1208, 1430, 1775
BcgI	CGANNNNNNTGC	2 cut(s)	590, 624
BciT130I	CCWGG	8 cut(s)	33, 189, 572, 750, 1299, 1548, 1759, 1905
BciVI	GTATCC	1 cut(s)	738
BcnI	CCSGG	1 cut(s)	849
BcoDI	GTCTC	4 cut(s)	234, 552, 646, 1913
BfaI	CTAG	4 cut(s)	57, 114, 1118, 1473
BfrI	CTTAAG	1 cut(s)	1478
BfuI	GTATCC	1 cut(s)	738
BglI	GCCNNNNNGGC	2 cut(s)	82, 1050
BglII	AGATCT	1 cut(s)	1384
BisI	GCNGC	2 cut(s)	147, 239
BlsI	GCNGC	2 cut(s)	148, 240
Bme1390I	CCNGG	9 cut(s)	33, 189, 572, 750, 849, 1299, 1548, 1759, 1905
Bme18I	GGWCC	3 cut(s)	176, 1649, 1755
BmgT120I	GGNCC	4 cut(s)	176, 1448, 1649, 1755
BmiI	GGNNCC	1 cut(s)	1764
BmrFI	CCNGG	9 cut(s)	33, 189, 572, 750, 849, 1299, 1548, 1759, 1905
BmrI	ACTGGG	2 cut(s)	1203, 1901
BmsI	GCATC	5 cut(s)	394, 490, 598, 1147, 1858
BmuI	ACTGGG	2 cut(s)	1203, 1901
BpiI	GAAGAC	1 cut(s)	1535
BplI	GAGNNNNNCTC	2 cut(s)	1575, 1607
BpmI	CTGGAG	1 cut(s)	1014
Bpu10I	CCTNAGC	2 cut(s)	106, 970
Bpu14I	TTCGAA	1 cut(s)	392
BpuEI	CTTGAG	1 cut(s)	670
BpuMI	CCSGG	1 cut(s)	849
BsaAI	YACGTR	1 cut(s)	2030
BsaBI	GATNNNNATC	1 cut(s)	1872
BsaHI	GRCGYC	1 cut(s)	85
BsaJI	CCNNGG	6 cut(s)	32, 139, 188, 1045, 1693, 1758
Bsc4I	CCNNNNNNNGG	6 cut(s)	38, 190, 458, 831, 920, 1517
Bse1I	ACTGG	4 cut(s)	544, 1198, 1533, 1896
Bse3DI	GCAATG	3 cut(s)	1060, 1273, 1346
Bse8I	GATNNNNATC	1 cut(s)	1872
BseBI	CCWGG	8 cut(s)	33, 189, 572, 750, 1299, 1548, 1759, 1905
BseDI	CCNNGG	6 cut(s)	32, 139, 188, 1045, 1693, 1758
BseGI	GGATG	7 cut(s)	73, 1024, 1183, 1544, 1767, 1846, 2124
BseJI	GATNNNNATC	1 cut(s)	1872
BseLI	CCNNNNNNNGG	6 cut(s)	38, 190, 458, 831, 920, 1517
BseMI	GCAATG	3 cut(s)	1060, 1273, 1346
BseMII	CTCAG	2 cut(s)	120, 684
BseNI	ACTGG	4 cut(s)	544, 1198, 1533, 1896
BseRI	GAGGAG	2 cut(s)	333, 414
BseSI	GKGCMC	1 cut(s)	849
BseXI	GCAGC	1 cut(s)	133
BseYI	CCCAGC	2 cut(s)	359, 1517
BsgI	GTGCAG	2 cut(s)	1437, 1869
BshFI	GGCC	6 cut(s)	76, 238, 529, 570, 1044, 1449
BsiSI	CCGG	1 cut(s)	849
BslFI	GGGAC	2 cut(s)	1675, 1916
BslI	CCNNNNNNNGG	6 cut(s)	38, 190, 458, 831, 920, 1517
BsmAI	GTCTC	4 cut(s)	234, 552, 646, 1913
BsmFI	GGGAC	2 cut(s)	1675, 1916
BsmI	GAATGC	1 cut(s)	1569
BsnI	GGCC	6 cut(s)	76, 238, 529, 570, 1044, 1449
Bsp119I	TTCGAA	1 cut(s)	392
Bsp1286I	GDGCHC	2 cut(s)	849, 969
Bsp143I	GATC	7 cut(s)	697, 775, 1006, 1093, 1384, 1762, 2121
BspACI	CCGC	4 cut(s)	239, 452, 1359, 2072
BspANI	GGCC	6 cut(s)	76, 238, 529, 570, 1044, 1449
BspCNI	CTCAG	2 cut(s)	119, 683
BspHI	TCATGA	1 cut(s)	798
BspLI	GGNNCC	1 cut(s)	1764
BspPI	GGATC	5 cut(s)	1014, 1101, 1757, 1770, 2116
BspQI	GCTCTTC	1 cut(s)	957
BspT104I	TTCGAA	1 cut(s)	392
BspTI	CTTAAG	1 cut(s)	1478
BsrBI	CCGCTC	1 cut(s)	241
BsrDI	GCAATG	3 cut(s)	1060, 1273, 1346
BsrI	ACTGG	4 cut(s)	544, 1198, 1533, 1896
BssECI	CCNNGG	6 cut(s)	32, 139, 188, 1045, 1693, 1758
BssMI	GATC	7 cut(s)	697, 775, 1006, 1093, 1384, 1762, 2121
BssNI	GRCGYC	1 cut(s)	85
BssT1I	CCWWGG	3 cut(s)	139, 1045, 1693
Bst2UI	CCWGG	8 cut(s)	33, 189, 572, 750, 1299, 1548, 1759, 1905
Bst4CI	ACNGT	8 cut(s)	11, 282, 380, 844, 953, 1321, 1847, 1862
Bst6I	CTCTTC	3 cut(s)	723, 800, 957
BstACI	GRCGYC	1 cut(s)	85
BstAFI	CTTAAG	1 cut(s)	1478
BstAPI	GCANNNNNTGC	1 cut(s)	1961
BstBAI	YACGTR	1 cut(s)	2030
BstBI	TTCGAA	1 cut(s)	392
BstC8I	GCNNGC	3 cut(s)	1060, 1663, 1978
BstDEI	CTNAG	5 cut(s)	106, 670, 779, 970, 1731
BstEII	GGTNACC	1 cut(s)	364
BstF5I	GGATG	7 cut(s)	73, 1024, 1183, 1544, 1767, 1846, 2124
BstHHI	GCGC	1 cut(s)	1661
BstKTI	GATC	7 cut(s)	700, 778, 1009, 1096, 1387, 1765, 2124
BstMAI	GTCTC	4 cut(s)	234, 552, 646, 1913
BstMBI	GATC	7 cut(s)	697, 775, 1006, 1093, 1384, 1762, 2121
BstMWI	GCNNNNNNNGC	8 cut(s)	82, 170, 1050, 1059, 1446, 1805, 1961, 2069
BstNI	CCWGG	8 cut(s)	33, 189, 572, 750, 1299, 1548, 1759, 1905
BstNSI	RCATGY	3 cut(s)	911, 1665, 2060
BstPI	GGTNACC	1 cut(s)	364
BstSCI	CCNGG	9 cut(s)	31, 187, 570, 748, 847, 1297, 1546, 1757, 1903
BstSLI	GKGCMC	1 cut(s)	849
BstV1I	GCAGC	1 cut(s)	133
BstV2I	GAAGAC	1 cut(s)	1535
BstX2I	RGATCY	2 cut(s)	1384, 1762
BstXI	CCANNNNNNTGG	1 cut(s)	284
BstYI	RGATCY	2 cut(s)	1384, 1762
BsuI	GTATCC	1 cut(s)	738
BsuRI	GGCC	6 cut(s)	76, 238, 529, 570, 1044, 1449
BtsCI	GGATG	7 cut(s)	73, 1024, 1183, 1544, 1767, 1846, 2124
BtsIMutI	CAGTG	3 cut(s)	849, 1540, 1889
Cac8I	GCNNGC	3 cut(s)	1060, 1663, 1978
CaiI	CAGNNNCTG	1 cut(s)	1891
CciI	TCATGA	1 cut(s)	798
CfoI	GCGC	1 cut(s)	1661
Cfr13I	GGNCC	4 cut(s)	176, 1448, 1649, 1755
CseI	GACGC	2 cut(s)	74, 777
Csp6I	GTAC	6 cut(s)	381, 683, 840, 1279, 1530, 1878
CviAII	CATG	7 cut(s)	799, 908, 1232, 1239, 1640, 1662, 2057
CviQI	GTAC	6 cut(s)	381, 683, 840, 1279, 1530, 1878
DdeI	CTNAG	5 cut(s)	106, 670, 779, 970, 1731
DpnI	GATC	7 cut(s)	699, 777, 1008, 1095, 1386, 1764, 2123
DpnII	GATC	7 cut(s)	697, 775, 1006, 1093, 1384, 1762, 2121
DraIII	CACNNNGTG	2 cut(s)	266, 566
EaeI	YGGCCR	2 cut(s)	568, 1042
Eam1104I	CTCTTC	3 cut(s)	723, 800, 957
EarI	CTCTTC	3 cut(s)	723, 800, 957
Eco130I	CCWWGG	3 cut(s)	139, 1045, 1693
Eco147I	AGGCCT	1 cut(s)	76
Eco24I	GRGCYC	1 cut(s)	969
Eco47I	GGWCC	3 cut(s)	176, 1649, 1755
Eco57I	CTGAAG	2 cut(s)	1329, 1377
Eco91I	GGTNACC	1 cut(s)	364
EcoO109I	RGGNCCY	2 cut(s)	1448, 1755
EcoO65I	GGTNACC	1 cut(s)	364
EcoRII	CCWGG	8 cut(s)	31, 187, 570, 748, 1297, 1546, 1757, 1903
EcoT14I	CCWWGG	3 cut(s)	139, 1045, 1693
EcoT38I	GRGCYC	1 cut(s)	969
ErhI	CCWWGG	3 cut(s)	139, 1045, 1693
FaeI	CATG	7 cut(s)	802, 911, 1235, 1242, 1643, 1665, 2060
FaqI	GGGAC	2 cut(s)	1675, 1916
FatI	CATG	7 cut(s)	798, 907, 1231, 1238, 1639, 1661, 2056
FblI	GTMKAC	1 cut(s)	600
Fnu4HI	GCNGC	2 cut(s)	147, 239
FokI	GGATG	7 cut(s)	80, 1031, 1190, 1551, 1754, 1853, 2131
FriOI	GRGCYC	1 cut(s)	969
Fsp4HI	GCNGC	2 cut(s)	147, 239
FspBI	CTAG	4 cut(s)	57, 114, 1118, 1473
FspI	TGCGCA	1 cut(s)	1660
GlaI	GCGC	1 cut(s)	1660
GluI	GCNGC	2 cut(s)	147, 239
GsaI	CCCAGC	2 cut(s)	363, 1521
GsuI	CTGGAG	1 cut(s)	1014
HaeIII	GGCC	6 cut(s)	76, 238, 529, 570, 1044, 1449
HapII	CCGG	1 cut(s)	849
HgaI	GACGC	2 cut(s)	74, 777
HhaI	GCGC	1 cut(s)	1661
Hin1I	GRCGYC	1 cut(s)	85
Hin1II	CATG	7 cut(s)	802, 911, 1235, 1242, 1643, 1665, 2060
Hin6I	GCGC	1 cut(s)	1659
HinP1I	GCGC	1 cut(s)	1659
HincII	GTYRAC	2 cut(s)	601, 2103
HindII	GTYRAC	2 cut(s)	601, 2103
HindIII	AAGCTT	3 cut(s)	1100, 1832, 2185
HinfI	GANTC	9 cut(s)	23, 227, 337, 942, 1235, 1910, 1921, 1987, 2045
HpaII	CCGG	1 cut(s)	849
HphI	GGTGA	3 cut(s)	281, 622, 1919
Hpy166II	GTNNAC	4 cut(s)	601, 1317, 1621, 2103
Hpy188I	TCNGA	7 cut(s)	226, 775, 881, 958, 1098, 1575, 2050
Hpy188III	TCNNGA	7 cut(s)	20, 417, 523, 759, 799, 946, 993
Hpy8I	GTNNAC	4 cut(s)	601, 1317, 1621, 2103
HpyAV	CCTTC	6 cut(s)	414, 423, 730, 734, 1192, 1662
HpyCH4III	ACNGT	8 cut(s)	11, 282, 380, 844, 953, 1321, 1847, 1862
HpyCH4IV	ACGT	3 cut(s)	457, 1431, 2029
HpyF10VI	GCNNNNNNNGC	8 cut(s)	82, 170, 1050, 1059, 1446, 1805, 1961, 2069
HpyF3I	CTNAG	5 cut(s)	106, 670, 779, 970, 1731
HpySE526I	ACGT	3 cut(s)	457, 1431, 2029
Hsp92I	GRCGYC	1 cut(s)	85
Hsp92II	CATG	7 cut(s)	802, 911, 1235, 1242, 1643, 1665, 2060
HspAI	GCGC	1 cut(s)	1659
Kzo9I	GATC	7 cut(s)	697, 775, 1006, 1093, 1384, 1762, 2121
LguI	GCTCTTC	1 cut(s)	957
LmnI	GCTCC	2 cut(s)	154, 916
Lsp1109I	GCAGC	1 cut(s)	133
LweI	GCATC	5 cut(s)	394, 490, 598, 1147, 1858
MaeI	CTAG	4 cut(s)	57, 114, 1118, 1473
MaeII	ACGT	3 cut(s)	457, 1431, 2029
MaeIII	GTNAC	1 cut(s)	364
MalI	GATC	7 cut(s)	699, 777, 1008, 1095, 1386, 1764, 2123
MbiI	CCGCTC	1 cut(s)	241
MboI	GATC	7 cut(s)	697, 775, 1006, 1093, 1384, 1762, 2121
MboII	GAAGA	9 cut(s)	114, 485, 720, 740, 787, 974, 981, 1535, 2161
MfeI	CAATTG	1 cut(s)	1332
MflI	RGATCY	2 cut(s)	1384, 1762
MhlI	GDGCHC	2 cut(s)	849, 969
MlsI	TGGCCA	2 cut(s)	570, 1044
MluNI	TGGCCA	2 cut(s)	570, 1044
MlyI	GAGTC	4 cut(s)	17, 236, 951, 1915
MmeI	TCCRAC	8 cut(s)	466, 655, 880, 938, 1214, 1348, 1581, 2056
Mox20I	TGGCCA	2 cut(s)	570, 1044
MroXI	GAANNNNTTC	2 cut(s)	715, 1407
MscI	TGGCCA	2 cut(s)	570, 1044
MseI	TTAA	5 cut(s)	579, 1173, 1479, 1497, 1725
MslI	CAYNNNNRTG	1 cut(s)	1644
Msp20I	TGGCCA	2 cut(s)	570, 1044
MspA1I	CMGCKG	2 cut(s)	359, 1995
MspCI	CTTAAG	1 cut(s)	1478
MspI	CCGG	1 cut(s)	849
MspR9I	CCNGG	9 cut(s)	33, 189, 572, 750, 849, 1299, 1548, 1759, 1905
MunI	CAATTG	1 cut(s)	1332
Mva1269I	GAATGC	1 cut(s)	1569
MvaI	CCWGG	8 cut(s)	33, 189, 572, 750, 1299, 1548, 1759, 1905
MwoI	GCNNNNNNNGC	8 cut(s)	82, 170, 1050, 1059, 1446, 1805, 1961, 2069
NciI	CCSGG	1 cut(s)	849
NdeII	GATC	7 cut(s)	697, 775, 1006, 1093, 1384, 1762, 2121
NlaIII	CATG	7 cut(s)	802, 911, 1235, 1242, 1643, 1665, 2060
NlaIV	GGNNCC	1 cut(s)	1764
NsbI	TGCGCA	1 cut(s)	1660
NspI	RCATGY	3 cut(s)	911, 1665, 2060
NspV	TTCGAA	1 cut(s)	392
PaeI	GCATGC	1 cut(s)	1665
PagI	TCATGA	1 cut(s)	798
PceI	AGGCCT	1 cut(s)	76
PciI	ACATGT	1 cut(s)	2056
PciSI	GCTCTTC	1 cut(s)	957
PcsI	WCGNNNNNNNCGW	1 cut(s)	1437
PctI	GAATGC	1 cut(s)	1569
PdmI	GAANNNNTTC	2 cut(s)	715, 1407
PfeI	GAWTC	5 cut(s)	337, 1235, 1910, 1987, 2045
PkrI	GCNGC	2 cut(s)	148, 240
PleI	GAGTC	4 cut(s)	17, 235, 950, 1915
PpsI	GAGTC	4 cut(s)	17, 235, 950, 1915
Ppu21I	YACGTR	1 cut(s)	2030
PpuMI	RGGWCCY	1 cut(s)	1755
PscI	ACATGT	1 cut(s)	2056
PshBI	ATTAAT	1 cut(s)	579
PsiI	TTATAA	1 cut(s)	1949
Psp5II	RGGWCCY	1 cut(s)	1755
Psp6I	CCWGG	8 cut(s)	31, 187, 570, 748, 1297, 1546, 1757, 1903
PspEI	GGTNACC	1 cut(s)	364
PspFI	CCCAGC	2 cut(s)	359, 1517
PspGI	CCWGG	8 cut(s)	31, 187, 570, 748, 1297, 1546, 1757, 1903
PspN4I	GGNNCC	1 cut(s)	1764
PspPI	GGNCC	4 cut(s)	176, 1448, 1649, 1755
PspPPI	RGGWCCY	1 cut(s)	1755
PsrI	GAACNNNNNNTAC	2 cut(s)	237, 269
PstNI	CAGNNNCTG	1 cut(s)	1891
PsuI	RGATCY	2 cut(s)	1384, 1762
PvuII	CAGCTG	2 cut(s)	359, 1995
RsaI	GTAC	6 cut(s)	382, 684, 841, 1280, 1531, 1879
RsaNI	GTAC	6 cut(s)	381, 683, 840, 1279, 1530, 1878
RseI	CAYNNNNRTG	1 cut(s)	1644
SalI	GTCGAC	1 cut(s)	599
SapI	GCTCTTC	1 cut(s)	957
SaqAI	TTAA	5 cut(s)	579, 1173, 1479, 1497, 1725
SatI	GCNGC	2 cut(s)	147, 239
Sau3AI	GATC	7 cut(s)	697, 775, 1006, 1093, 1384, 1762, 2121
Sau96I	GGNCC	4 cut(s)	176, 1448, 1649, 1755
SchI	GAGTC	4 cut(s)	17, 236, 951, 1915
ScrFI	CCNGG	9 cut(s)	33, 189, 572, 750, 849, 1299, 1548, 1759, 1905
SduI	GDGCHC	2 cut(s)	849, 969
SfaNI	GCATC	5 cut(s)	394, 490, 598, 1147, 1858
SfuI	TTCGAA	1 cut(s)	392
SinI	GGWCC	3 cut(s)	176, 1649, 1755
SmiMI	CAYNNNNRTG	1 cut(s)	1644
SmlI	CTYRAG	2 cut(s)	649, 1478
SmoI	CTYRAG	2 cut(s)	649, 1478
SphI	GCATGC	1 cut(s)	1665
SseBI	AGGCCT	1 cut(s)	76
SsiI	CCGC	4 cut(s)	239, 452, 1359, 2072
SspMI	CTAG	4 cut(s)	57, 114, 1118, 1473
StuI	AGGCCT	1 cut(s)	76
StyD4I	CCNGG	9 cut(s)	31, 187, 570, 748, 847, 1297, 1546, 1757, 1903
StyI	CCWWGG	3 cut(s)	139, 1045, 1693
TaaI	ACNGT	8 cut(s)	11, 282, 380, 844, 953, 1321, 1847, 1862
TaiI	ACGT	3 cut(s)	460, 1434, 2032
TaqI	TCGA	5 cut(s)	243, 392, 416, 600, 758
TatI	WGTACW	3 cut(s)	380, 682, 1278
TauI	GCSGC	1 cut(s)	241
TfiI	GAWTC	5 cut(s)	337, 1235, 1910, 1987, 2045
Tru1I	TTAA	5 cut(s)	579, 1173, 1479, 1497, 1725
Tru9I	TTAA	5 cut(s)	579, 1173, 1479, 1497, 1725
TscAI	CASTG	3 cut(s)	849, 1540, 1896
TseI	GCWGC	1 cut(s)	146
TspGWI	ACGGA	1 cut(s)	1760
TspRI	CASTG	3 cut(s)	849, 1540, 1896
Vha464I	CTTAAG	1 cut(s)	1478
VpaK11BI	GGWCC	3 cut(s)	176, 1649, 1755
VspI	ATTAAT	1 cut(s)	579
XapI	RAATTY	2 cut(s)	325, 1707
XceI	RCATGY	3 cut(s)	911, 1665, 2060
XcmI	CCANNNNNNNNNTGG	2 cut(s)	833, 2010
XmiI	GTMKAC	1 cut(s)	600
XmnI	GAANNNNTTC	2 cut(s)	715, 1407
XspI	CTAG	4 cut(s)	57, 114, 1118, 1473

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.