Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0010169

Physical Location & Seq

Genomic Coordinates Reverse (-)

43214072 .. 43219420

Gene Structure 5349 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ45700

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2205 bp

ATGGAACACAGTTTAGGTCAAGACTCTGTCCCTGGGTTTGGGTCATTTGATAAGTCTAGGGTTTTGGATGTAAGGCCTTTGAGGCGCCTTGTTCCTGTATTCCCCTCAGCTTCTTCATTTTCGACACCACCCCAAGGTGCTGCTCCTTTTGTTTGTGCTTCCCCCGCTGGTCCTTTCCCACCTGGGGTTTCCCCATTTTTCCCCTTTTTCATTTCATCAGAGTCTCAAAGGCCGTTCGAACAAAATCTACAAACACCAAGTGGTATACCCAATGAGAATCAACCGTTTGGCTTCACTAATCCAATATCTAATGCAGTTCCAATCAATTCCTTTAGGAATCCTCCTCCACCCTCAACAGCTGGGGTAACCCCCAACCAGAGTACAGGAACTTCGAATGGAGGAGATTCTACACCTTCGAGAAGGATTACTAGAAGTCGTGTCCAACCACAACCGCAACGTGGGGCTGCGGAGGAAGATGGTTTGAGCGAGAGTGTTGTTGATGCAGAAAATAAAAGGAGGGTCGGGAGGCCAAAGGGTAAATTCCAGTCTCAAAAGAGGACACGGGGTGGCCAGGACATTAATGTTGCCTTGCCTGATGTCGACATTGATGCAATAGTTGATAATGTTCTCACCACATATACCAATACATTGAGACAAACTGATGCCAACAAGGAATCAGTTGGATATTTACTCATGTGTTATGATCTGCTACGAAGAAAGATTTCACAAATTGAAGAGATGAAGGAAGGGATACCTGGAGTGTCGAGAACAGGACGCTCTGATCTAAGGGCTGGAACTCTCTTCATGAATAAGGGAATTAGGACAAATGCCCAAAAGAGGATTGGTACAGTGCCTGGTGTTGAAGTTGGGGATATTTTCTTTTTCCGAATGGAATTGTGCTTGGTTGGATTACACGCTCCAACTATGGGTGGGATTGATTATATGGGAGTCAAGAACAGTTCAGAGGAAGAGCCCTTAGCATTAAGCATTGTTTCTTCTGGAGGGTATGAGGATCATATACAGGATGGGAATGAGTTGATATATAGTGGCCAAGGTGGCAATGCCGGCAACGATAACAGGAAAGATAAGGAAACAAAGGATCAGAAGCTTGAAAGGGGTAATCTAGCTTTGGAGAAAAGTTTGCATCGGGGTAATGATGTAAGAGTAATTCGGGGTGTTAAGGATGTTTCTAATCCAACTGGGAAGGTATATGTCTATGACGGTCTATACAAAATCCATGAATCATGGGTAGATAAAGGAAAGAGTGGTGCCAATGTATTCAAGTACAGATTGGTAAGATTACCTGGACAGCCTGAAGCGTTTACAGTATGGAAATCAATTGAGCAATGGAAAGAAACAAATACTACAAGGGTTGGATTGATATTGCCAGATCTTACTTCAGGGGCAGAAACTTTTCCCGTTTCTCTTGTAAATGATGTAGATGGAGAGAAAGGCCCTGCACACTTCACATATATTCCTAGTCTTAAGTATTCAAAACCTGTTAATCTTACAGAACCTACTGCTGGGTGTAATTGTACCGGTGGATGTCTCCCTGGTAATTCCAACTGCACTTGCATTCAGAAAAATGGAGGTTATCTCCCATATACTGCAAATGGGCTTCTTGTGAACCAAAAATCCTTATTACATGAATGTGGTCCTTCCTGCAAATGCCCTCCTAATTGTCGTAATCGTGTGTCCCAAGGTGGCTTGAAAATTCGTTTGGAAGTGTTTAAGACTAAGGATAAAGGTTGGGGTTTGAGGTCCTGGGATCCCATCCGTGCTGGTGCTTTCTTATGCGAGTATGCAGGGGAAGCTCTAAATGTTTCTGGTATAGAAAAGCTTGGGGATGACCGTGCAGATGATTACAGTTTTGATGCTAATCGTACTTGTCAGCCACTGGGAGTTCTGCCTGGTGATTCTAATGAGACTCCACATGTCCCTTTTCCTCTACTTATAAGTGCAAATACTGCCGGAAATGTTGCTCGCTTTATGAATCACAGCTGTTCTCCAAATGTGTTCTGGCAACCAATTTTACGTGAAAATAAAAATGAATCTGATTTACATGTTGCATTTTATGCGGTTGGACACATTCCTCCTATGACAGAGTTGACTTATGATTATGGGATGATCCCTTATGAGAAAGGATACCAGAGGAAGAAAATATGCCTTTGTCGGTCAATAAAGTGTAGAAGCTTCTTTTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00260 ko00310 ko01100 ko04146 ko04211 map00260 map00310 map01100 map04146 map04211

Pfam Domains

Protein Families

AT_hook Pre-SET SAD_SRA SET

Protein Analysis

734

Amino Acids

80.46

Weight (kDa)

8.57

Isoelectric Point (pI)

47.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAD_SRA	PF02182	280 - 437	1.2e-55	SAD/SRA domain
Pre-SET	PF05033	467 - 564	7.1e-24	Pre-SET motif
SET	PF00856	583 - 708	2e-17	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010169)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G05900
fragaria_vesca	FvH4_7g07980
malus_domestica	MD00G1068300.v1.1 MD12G1112200.v1.1 MD14G1101300.v1.1
prunus_persica	Prupe.7G021100_v2.0.a1 Prupe.7G021100_v2.0.a1
pyrus_communis	pycom12g09140 pycom14g08780
rosa_chinensis	RchiOBHm_Chr3g0494321 RchiOBHm_Chr3g0494471
rosa_laevigata	RLG00000022673
rosa_multiflora	Rmu_sc0000152.1_g000010
rosa_roxburghii	Rroxscaffold_6G00391110
rosa_rugosa	Rorug03G0265400
rosa_samantha	Rh3AG314800 Rh3AG315600 Rh3BG350800 Rh3CG347500 Rh3DG350100
rosa_wichuraiana	Rw3G027550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1955
AccB1I	GGYRCC	2 cut(s)	84, 1268
AccI	GTMKAC	2 cut(s)	265, 600
AciI	CCGC	4 cut(s)	165, 452, 467, 2078
AclWI	GGATC	5 cut(s)	1020, 1107, 1763, 1776, 2122
AcoI	YGGCCR	2 cut(s)	568, 1048
AcsI	RAATTY	2 cut(s)	539, 1713
AcuI	CTGAAG	2 cut(s)	1335, 1383
AcyI	GRCGYC	1 cut(s)	85
AdeI	CACNNNGTG	2 cut(s)	260, 566
AfaI	GTAC	5 cut(s)	382, 847, 1286, 1537, 1885
AfiI	CCNNNNNNNGG	7 cut(s)	38, 134, 184, 458, 837, 926, 1523
AflII	CTTAAG	1 cut(s)	1484
AflIII	ACRYGT	2 cut(s)	1933, 2062
AgeI	ACCGGT	1 cut(s)	1538
AgsI	TTSAA	6 cut(s)	734, 863, 1112, 1282, 1494, 1711
AjnI	CCWGG	9 cut(s)	31, 181, 570, 754, 853, 1303, 1552, 1763, 1909
AjuI	GAANNNNNNNTTGG	2 cut(s)	1703, 1735
AloI	GAACNNNNNNTCC	2 cut(s)	1619, 1651
AluBI	AGCT	8 cut(s)	110, 359, 1108, 1127, 1814, 1840, 2001, 2193
AluI	AGCT	8 cut(s)	110, 359, 1108, 1127, 1814, 1840, 2001, 2193
Alw26I	GTCTC	5 cut(s)	228, 552, 646, 1553, 1919
AlwI	GGATC	5 cut(s)	1020, 1107, 1763, 1776, 2122
AlwNI	CAGNNNCTG	2 cut(s)	854, 1897
AoxI	GGCC	6 cut(s)	74, 230, 527, 568, 1048, 1453
ApeKI	GCWGC	2 cut(s)	140, 464
ApoI	RAATTY	2 cut(s)	539, 1713
AseI	ATTAAT	1 cut(s)	579
AsiGI	ACCGGT	1 cut(s)	1538
Asp700I	GAANNNNTTC	2 cut(s)	721, 1413
AspLEI	GCGC	1 cut(s)	87
AspS9I	GGNCC	4 cut(s)	170, 1454, 1655, 1761
AsuHPI	GGTGA	2 cut(s)	622, 1925
AsuII	TTCGAA	2 cut(s)	237, 392
AvaII	GGWCC	3 cut(s)	170, 1655, 1761
BalI	TGGCCA	2 cut(s)	570, 1050
BamHI	GGATCC	1 cut(s)	1768
BanI	GGYRCC	2 cut(s)	84, 1268
BanII	GRGCYC	1 cut(s)	975
BarI	GAAGNNNNNNTAC	2 cut(s)	373, 405
BbvCI	CCTCAGC	1 cut(s)	106
BbvI	GCAGC	2 cut(s)	127, 451
BccI	CCATC	4 cut(s)	470, 1019, 1436, 1781
BceAI	ACGGC	1 cut(s)	217
BcgI	CGANNNNNNTGC	2 cut(s)	590, 624
BciT130I	CCWGG	9 cut(s)	33, 183, 572, 756, 855, 1305, 1554, 1765, 1911
BciVI	GTATCC	2 cut(s)	744, 2138
BcoDI	GTCTC	5 cut(s)	228, 552, 646, 1553, 1919
BfaI	CTAG	4 cut(s)	57, 429, 1124, 1479
BfoI	RGCGCY	1 cut(s)	88
BfrI	CTTAAG	1 cut(s)	1484
BfuI	GTATCC	2 cut(s)	744, 2138
BglI	GCCNNNNNGGC	2 cut(s)	82, 1056
BglII	AGATCT	1 cut(s)	1390
BisI	GCNGC	2 cut(s)	141, 465
BlsI	GCNGC	2 cut(s)	142, 466
Bme1390I	CCNGG	9 cut(s)	33, 183, 572, 756, 855, 1305, 1554, 1765, 1911
Bme18I	GGWCC	3 cut(s)	170, 1655, 1761
BmgT120I	GGNCC	4 cut(s)	170, 1454, 1655, 1761
BmiI	GGNNCC	3 cut(s)	86, 1270, 1770
BmrFI	CCNGG	9 cut(s)	33, 183, 572, 756, 855, 1305, 1554, 1765, 1911
BmrI	ACTGGG	2 cut(s)	1209, 1907
BmsI	GCATC	5 cut(s)	490, 598, 652, 1153, 1864
BmuI	ACTGGG	2 cut(s)	1209, 1907
BplI	GAGNNNNNCTC	2 cut(s)	1581, 1613
BpmI	CTGGAG	2 cut(s)	777, 1020
Bpu10I	CCTNAGC	2 cut(s)	106, 976
Bpu14I	TTCGAA	2 cut(s)	237, 392
BsaAI	YACGTR	1 cut(s)	2036
BsaBI	GATNNNNATC	1 cut(s)	1878
BsaHI	GRCGYC	1 cut(s)	85
BsaJI	CCNNGG	8 cut(s)	31, 32, 133, 182, 1051, 1552, 1699, 1764
BsaWI	WCCGGW	1 cut(s)	1538
Bsc4I	CCNNNNNNNGG	7 cut(s)	38, 134, 184, 458, 837, 926, 1523
Bse118I	RCCGGY	2 cut(s)	1064, 1538
Bse1I	ACTGG	3 cut(s)	544, 1204, 1902
Bse3DI	GCAATG	2 cut(s)	1066, 1352
Bse8I	GATNNNNATC	1 cut(s)	1878
BseBI	CCWGG	9 cut(s)	33, 183, 572, 756, 855, 1305, 1554, 1765, 1911
BseDI	CCNNGG	8 cut(s)	31, 32, 133, 182, 1051, 1552, 1699, 1764
BseGI	GGATG	7 cut(s)	73, 1030, 1189, 1550, 1773, 1852, 2130
BseJI	GATNNNNATC	1 cut(s)	1878
BseLI	CCNNNNNNNGG	7 cut(s)	38, 134, 184, 458, 837, 926, 1523
BseMI	GCAATG	2 cut(s)	1066, 1352
BseMII	CTCAG	1 cut(s)	120
BseNI	ACTGG	3 cut(s)	544, 1204, 1902
BseRI	GAGGAG	2 cut(s)	333, 414
BseXI	GCAGC	2 cut(s)	127, 451
BseYI	CCCAGC	2 cut(s)	359, 1523
BsgI	GTGCAG	3 cut(s)	1443, 1552, 1875
BshFI	GGCC	6 cut(s)	76, 232, 529, 570, 1050, 1455
BshNI	GGYRCC	2 cut(s)	84, 1268
BshTI	ACCGGT	1 cut(s)	1538
BsiSI	CCGG	3 cut(s)	1065, 1539, 1971
BslFI	GGGAC	3 cut(s)	14, 1681, 1922
BslI	CCNNNNNNNGG	7 cut(s)	38, 134, 184, 458, 837, 926, 1523
BsmAI	GTCTC	5 cut(s)	228, 552, 646, 1553, 1919
BsmFI	GGGAC	3 cut(s)	14, 1681, 1922
BsmI	GAATGC	1 cut(s)	1575
BsnI	GGCC	6 cut(s)	76, 232, 529, 570, 1050, 1455
Bsp119I	TTCGAA	2 cut(s)	237, 392
Bsp1286I	GDGCHC	1 cut(s)	975
Bsp143I	GATC	7 cut(s)	703, 781, 1012, 1099, 1390, 1768, 2127
BspACI	CCGC	4 cut(s)	165, 452, 467, 2078
BspANI	GGCC	6 cut(s)	76, 232, 529, 570, 1050, 1455
BspCNI	CTCAG	1 cut(s)	119
BspHI	TCATGA	1 cut(s)	804
BspLI	GGNNCC	3 cut(s)	86, 1270, 1770
BspPI	GGATC	5 cut(s)	1020, 1107, 1763, 1776, 2122
BspQI	GCTCTTC	1 cut(s)	963
BspT104I	TTCGAA	2 cut(s)	237, 392
BspT107I	GGYRCC	2 cut(s)	84, 1268
BspTI	CTTAAG	1 cut(s)	1484
BsrDI	GCAATG	2 cut(s)	1066, 1352
BsrFI	RCCGGY	2 cut(s)	1064, 1538
BsrI	ACTGG	3 cut(s)	544, 1204, 1902
BssAI	RCCGGY	2 cut(s)	1064, 1538
BssECI	CCNNGG	8 cut(s)	31, 32, 133, 182, 1051, 1552, 1699, 1764
BssMI	GATC	7 cut(s)	703, 781, 1012, 1099, 1390, 1768, 2127
BssNAI	GTATAC	1 cut(s)	266
BssNI	GRCGYC	1 cut(s)	85
BssT1I	CCWWGG	3 cut(s)	133, 1051, 1699
Bst1107I	GTATAC	1 cut(s)	266
Bst2UI	CCWGG	9 cut(s)	33, 183, 572, 756, 855, 1305, 1554, 1765, 1911
Bst4CI	ACNGT	8 cut(s)	11, 285, 850, 959, 1223, 1327, 1853, 1868
Bst6I	CTCTTC	3 cut(s)	729, 806, 963
BstACI	GRCGYC	1 cut(s)	85
BstAFI	CTTAAG	1 cut(s)	1484
BstAPI	GCANNNNNTGC	2 cut(s)	1967, 2075
BstBAI	YACGTR	1 cut(s)	2036
BstBI	TTCGAA	2 cut(s)	237, 392
BstC8I	GCNNGC	2 cut(s)	1066, 1984
BstDEI	CTNAG	4 cut(s)	106, 785, 976, 1737
BstEII	GGTNACC	1 cut(s)	364
BstF5I	GGATG	7 cut(s)	73, 1030, 1189, 1550, 1773, 1852, 2130
BstH2I	RGCGCY	1 cut(s)	88
BstHHI	GCGC	1 cut(s)	87
BstKTI	GATC	7 cut(s)	706, 784, 1015, 1102, 1393, 1771, 2130
BstMAI	GTCTC	5 cut(s)	228, 552, 646, 1553, 1919
BstMBI	GATC	7 cut(s)	703, 781, 1012, 1099, 1390, 1768, 2127
BstMWI	GCNNNNNNNGC	7 cut(s)	82, 164, 1056, 1065, 1811, 1967, 2075
BstNI	CCWGG	9 cut(s)	33, 183, 572, 756, 855, 1305, 1554, 1765, 1911
BstNSI	RCATGY	2 cut(s)	1937, 2066
BstPI	GGTNACC	1 cut(s)	364
BstSCI	CCNGG	9 cut(s)	31, 181, 570, 754, 853, 1303, 1552, 1763, 1909
BstV1I	GCAGC	2 cut(s)	127, 451
BstX2I	RGATCY	2 cut(s)	1390, 1768
BstYI	RGATCY	2 cut(s)	1390, 1768
BstZ17I	GTATAC	1 cut(s)	266
BsuI	GTATCC	2 cut(s)	744, 2138
BsuRI	GGCC	6 cut(s)	76, 232, 529, 570, 1050, 1455
BtsCI	GGATG	7 cut(s)	73, 1030, 1189, 1550, 1773, 1852, 2130
BtsIMutI	CAGTG	2 cut(s)	855, 1895
Cac8I	GCNNGC	2 cut(s)	1066, 1984
CaiI	CAGNNNCTG	2 cut(s)	854, 1897
CciI	TCATGA	1 cut(s)	804
CfoI	GCGC	1 cut(s)	87
Cfr10I	RCCGGY	2 cut(s)	1064, 1538
Cfr13I	GGNCC	4 cut(s)	170, 1454, 1655, 1761
CseI	GACGC	1 cut(s)	783
Csp6I	GTAC	5 cut(s)	381, 846, 1285, 1536, 1884
CspAI	ACCGGT	1 cut(s)	1538
CviAII	CATG	7 cut(s)	694, 805, 1238, 1245, 1646, 1934, 2063
CviQI	GTAC	5 cut(s)	381, 846, 1285, 1536, 1884
DdeI	CTNAG	4 cut(s)	106, 785, 976, 1737
DinI	GGCGCC	1 cut(s)	86
DpnI	GATC	7 cut(s)	705, 783, 1014, 1101, 1392, 1770, 2129
DpnII	GATC	7 cut(s)	703, 781, 1012, 1099, 1390, 1768, 2127
DraIII	CACNNNGTG	2 cut(s)	260, 566
EaeI	YGGCCR	2 cut(s)	568, 1048
Eam1104I	CTCTTC	3 cut(s)	729, 806, 963
EarI	CTCTTC	3 cut(s)	729, 806, 963
Eco130I	CCWWGG	3 cut(s)	133, 1051, 1699
Eco147I	AGGCCT	1 cut(s)	76
Eco24I	GRGCYC	1 cut(s)	975
Eco47I	GGWCC	3 cut(s)	170, 1655, 1761
Eco57I	CTGAAG	2 cut(s)	1335, 1383
Eco91I	GGTNACC	1 cut(s)	364
EcoO109I	RGGNCCY	2 cut(s)	1454, 1761
EcoO65I	GGTNACC	1 cut(s)	364
EcoRII	CCWGG	9 cut(s)	31, 181, 570, 754, 853, 1303, 1552, 1763, 1909
EcoT14I	CCWWGG	3 cut(s)	133, 1051, 1699
EcoT38I	GRGCYC	1 cut(s)	975
EgeI	GGCGCC	1 cut(s)	86
EheI	GGCGCC	1 cut(s)	86
ErhI	CCWWGG	3 cut(s)	133, 1051, 1699
FaeI	CATG	7 cut(s)	697, 808, 1241, 1248, 1649, 1937, 2066
FaqI	GGGAC	3 cut(s)	14, 1681, 1922
FatI	CATG	7 cut(s)	693, 804, 1237, 1244, 1645, 1933, 2062
FauI	CCCGC	1 cut(s)	172
FblI	GTMKAC	2 cut(s)	265, 600
Fnu4HI	GCNGC	2 cut(s)	141, 465
FokI	GGATG	7 cut(s)	80, 1037, 1196, 1557, 1760, 1859, 2137
FriOI	GRGCYC	1 cut(s)	975
Fsp4HI	GCNGC	2 cut(s)	141, 465
FspBI	CTAG	4 cut(s)	57, 429, 1124, 1479
GlaI	GCGC	1 cut(s)	86
GluI	GCNGC	2 cut(s)	141, 465
GsaI	CCCAGC	2 cut(s)	363, 1527
GsuI	CTGGAG	2 cut(s)	777, 1020
HaeII	RGCGCY	1 cut(s)	88
HaeIII	GGCC	6 cut(s)	76, 232, 529, 570, 1050, 1455
HapII	CCGG	3 cut(s)	1065, 1539, 1971
HgaI	GACGC	1 cut(s)	783
HhaI	GCGC	1 cut(s)	87
Hin1I	GRCGYC	1 cut(s)	85
Hin1II	CATG	7 cut(s)	697, 808, 1241, 1248, 1649, 1937, 2066
Hin6I	GCGC	1 cut(s)	85
HinP1I	GCGC	1 cut(s)	85
HincII	GTYRAC	2 cut(s)	601, 2109
HindII	GTYRAC	2 cut(s)	601, 2109
HindIII	AAGCTT	3 cut(s)	1106, 1838, 2191
HpaII	CCGG	3 cut(s)	1065, 1539, 1971
HphI	GGTGA	2 cut(s)	622, 1925
Hpy166II	GTNNAC	5 cut(s)	266, 601, 1323, 1627, 2109
Hpy188I	TCNGA	7 cut(s)	220, 781, 887, 964, 1104, 1581, 2056
Hpy188III	TCNNGA	7 cut(s)	20, 417, 523, 765, 805, 952, 999
Hpy8I	GTNNAC	5 cut(s)	266, 601, 1323, 1627, 2109
HpyAV	CCTTC	6 cut(s)	414, 423, 736, 740, 1198, 1668
HpyCH4III	ACNGT	8 cut(s)	11, 285, 850, 959, 1223, 1327, 1853, 1868
HpyCH4IV	ACGT	2 cut(s)	457, 2035
HpyF10VI	GCNNNNNNNGC	7 cut(s)	82, 164, 1056, 1065, 1811, 1967, 2075
HpyF3I	CTNAG	4 cut(s)	106, 785, 976, 1737
HpySE526I	ACGT	2 cut(s)	457, 2035
Hsp92I	GRCGYC	1 cut(s)	85
Hsp92II	CATG	7 cut(s)	697, 808, 1241, 1248, 1649, 1937, 2066
HspAI	GCGC	1 cut(s)	85
KasI	GGCGCC	1 cut(s)	84
KroI	GCCGGC	1 cut(s)	1064
KroNI	GCCGGC	1 cut(s)	1066
Kzo9I	GATC	7 cut(s)	703, 781, 1012, 1099, 1390, 1768, 2127
LguI	GCTCTTC	1 cut(s)	963
LmnI	GCTCC	2 cut(s)	148, 922
Lsp1109I	GCAGC	2 cut(s)	127, 451
LweI	GCATC	5 cut(s)	490, 598, 652, 1153, 1864
MaeI	CTAG	4 cut(s)	57, 429, 1124, 1479
MaeII	ACGT	2 cut(s)	457, 2035
MaeIII	GTNAC	1 cut(s)	364
MalI	GATC	7 cut(s)	705, 783, 1014, 1101, 1392, 1770, 2129
MboI	GATC	7 cut(s)	703, 781, 1012, 1099, 1390, 1768, 2127
MboII	GAAGA	8 cut(s)	105, 485, 726, 746, 793, 980, 987, 2167
MfeI	CAATTG	1 cut(s)	1338
MflI	RGATCY	2 cut(s)	1390, 1768
MhlI	GDGCHC	1 cut(s)	975
MlsI	TGGCCA	2 cut(s)	570, 1050
MluNI	TGGCCA	2 cut(s)	570, 1050
Mly113I	GGCGCC	1 cut(s)	85
MlyI	GAGTC	4 cut(s)	17, 230, 957, 1921
MmeI	TCCRAC	8 cut(s)	466, 661, 886, 944, 1220, 1354, 1587, 2062
Mox20I	TGGCCA	2 cut(s)	570, 1050
MroNI	GCCGGC	1 cut(s)	1064
MroXI	GAANNNNTTC	2 cut(s)	721, 1413
MscI	TGGCCA	2 cut(s)	570, 1050
MseI	TTAA	6 cut(s)	579, 983, 1179, 1485, 1503, 1731
MslI	CAYNNNNRTG	1 cut(s)	1650
Msp20I	TGGCCA	2 cut(s)	570, 1050
MspA1I	CMGCKG	3 cut(s)	167, 359, 2001
MspCI	CTTAAG	1 cut(s)	1484
MspI	CCGG	3 cut(s)	1065, 1539, 1971
MspR9I	CCNGG	9 cut(s)	33, 183, 572, 756, 855, 1305, 1554, 1765, 1911
MunI	CAATTG	1 cut(s)	1338
Mva1269I	GAATGC	1 cut(s)	1575
MvaI	CCWGG	9 cut(s)	33, 183, 572, 756, 855, 1305, 1554, 1765, 1911
MwoI	GCNNNNNNNGC	7 cut(s)	82, 164, 1056, 1065, 1811, 1967, 2075
NaeI	GCCGGC	1 cut(s)	1066
NarI	GGCGCC	1 cut(s)	85
NdeII	GATC	7 cut(s)	703, 781, 1012, 1099, 1390, 1768, 2127
NgoMIV	GCCGGC	1 cut(s)	1064
NlaIII	CATG	7 cut(s)	697, 808, 1241, 1248, 1649, 1937, 2066
NlaIV	GGNNCC	3 cut(s)	86, 1270, 1770
NspI	RCATGY	2 cut(s)	1937, 2066
NspV	TTCGAA	2 cut(s)	237, 392
PagI	TCATGA	1 cut(s)	804
PasI	CCCWGGG	1 cut(s)	32
PceI	AGGCCT	1 cut(s)	76
PciI	ACATGT	2 cut(s)	1933, 2062
PciSI	GCTCTTC	1 cut(s)	963
PctI	GAATGC	1 cut(s)	1575
PdiI	GCCGGC	1 cut(s)	1066
PdmI	GAANNNNTTC	2 cut(s)	721, 1413
PfeI	GAWTC	8 cut(s)	277, 337, 404, 674, 1241, 1916, 1993, 2051
PflFI	GACNNNGTC	1 cut(s)	26
PinAI	ACCGGT	1 cut(s)	1538
PkrI	GCNGC	2 cut(s)	142, 466
PleI	GAGTC	4 cut(s)	17, 229, 956, 1921
PluTI	GGCGCC	1 cut(s)	88
PpsI	GAGTC	4 cut(s)	17, 229, 956, 1921
Ppu21I	YACGTR	1 cut(s)	2036
PpuMI	RGGWCCY	1 cut(s)	1761
PscI	ACATGT	2 cut(s)	1933, 2062
PshBI	ATTAAT	1 cut(s)	579
PsiI	TTATAA	1 cut(s)	1955
Psp5II	RGGWCCY	1 cut(s)	1761
Psp6I	CCWGG	9 cut(s)	31, 181, 570, 754, 853, 1303, 1552, 1763, 1909
PspEI	GGTNACC	1 cut(s)	364
PspFI	CCCAGC	2 cut(s)	359, 1523
PspGI	CCWGG	9 cut(s)	31, 181, 570, 754, 853, 1303, 1552, 1763, 1909
PspN4I	GGNNCC	3 cut(s)	86, 1270, 1770
PspPI	GGNCC	4 cut(s)	170, 1454, 1655, 1761
PspPPI	RGGWCCY	1 cut(s)	1761
PsrI	GAACNNNNNNTAC	2 cut(s)	231, 263
PstNI	CAGNNNCTG	2 cut(s)	854, 1897
PsuI	RGATCY	2 cut(s)	1390, 1768
PsyI	GACNNNGTC	1 cut(s)	26
PvuII	CAGCTG	2 cut(s)	359, 2001
RsaI	GTAC	5 cut(s)	382, 847, 1286, 1537, 1885
RsaNI	GTAC	5 cut(s)	381, 846, 1285, 1536, 1884
RseI	CAYNNNNRTG	1 cut(s)	1650
SalI	GTCGAC	1 cut(s)	599
SapI	GCTCTTC	1 cut(s)	963
SaqAI	TTAA	6 cut(s)	579, 983, 1179, 1485, 1503, 1731
SatI	GCNGC	2 cut(s)	141, 465
Sau3AI	GATC	7 cut(s)	703, 781, 1012, 1099, 1390, 1768, 2127
Sau96I	GGNCC	4 cut(s)	170, 1454, 1655, 1761
SchI	GAGTC	4 cut(s)	17, 230, 957, 1921
ScrFI	CCNGG	9 cut(s)	33, 183, 572, 756, 855, 1305, 1554, 1765, 1911
SduI	GDGCHC	1 cut(s)	975
SfaNI	GCATC	5 cut(s)	490, 598, 652, 1153, 1864
SfoI	GGCGCC	1 cut(s)	86
SfuI	TTCGAA	2 cut(s)	237, 392
SinI	GGWCC	3 cut(s)	170, 1655, 1761
SmiMI	CAYNNNNRTG	1 cut(s)	1650
SmlI	CTYRAG	1 cut(s)	1484
SmoI	CTYRAG	1 cut(s)	1484
SseBI	AGGCCT	1 cut(s)	76
SsiI	CCGC	4 cut(s)	165, 452, 467, 2078
SspDI	GGCGCC	1 cut(s)	84
SspMI	CTAG	4 cut(s)	57, 429, 1124, 1479
StuI	AGGCCT	1 cut(s)	76
StyD4I	CCNGG	9 cut(s)	31, 181, 570, 754, 853, 1303, 1552, 1763, 1909
StyI	CCWWGG	3 cut(s)	133, 1051, 1699
TaaI	ACNGT	8 cut(s)	11, 285, 850, 959, 1223, 1327, 1853, 1868
TaiI	ACGT	2 cut(s)	460, 2038
TaqI	TCGA	6 cut(s)	122, 237, 392, 416, 600, 764
TaqII	GACCGA	1 cut(s)	2163
TatI	WGTACW	2 cut(s)	380, 1284
TfiI	GAWTC	8 cut(s)	277, 337, 404, 674, 1241, 1916, 1993, 2051
Tru1I	TTAA	6 cut(s)	579, 983, 1179, 1485, 1503, 1731
Tru9I	TTAA	6 cut(s)	579, 983, 1179, 1485, 1503, 1731
TscAI	CASTG	2 cut(s)	855, 1902
TseI	GCWGC	2 cut(s)	140, 464
TspGWI	ACGGA	1 cut(s)	1766
TspRI	CASTG	2 cut(s)	855, 1902
Tth111I	GACNNNGTC	1 cut(s)	26
Vha464I	CTTAAG	1 cut(s)	1484
VpaK11BI	GGWCC	3 cut(s)	170, 1655, 1761
VspI	ATTAAT	1 cut(s)	579
XapI	RAATTY	2 cut(s)	539, 1713
XceI	RCATGY	2 cut(s)	1937, 2066
XcmI	CCANNNNNNNNNTGG	2 cut(s)	839, 2016
XmiI	GTMKAC	2 cut(s)	265, 600
XmnI	GAANNNNTTC	2 cut(s)	721, 1413
XspI	CTAG	4 cut(s)	57, 429, 1124, 1479

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.