Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0010169

Physical Location & Seq

Genomic Coordinates Reverse (-)

42883691 .. 42885895

Gene Structure 2205 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG315600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2205 bp

ATGGAACACAGTTTAGGTCAAGACTCTGTCCCTGGGTTTGGGTCATTTGATAAGTCTAGGGTTTTGGATGTAAGGCCTTTGAGGCGCCTTGTTCCTGTATTCCCCTCAGCTTCTTCATTTTCGACACCACCCCAAGGTGCTGCTCCTTTTGTTTGTGCTTCCCCCGCTGGTCCTTTCCCACCTGGGGTTTCCCCATTTTTCCCCTTTTTCATTTCATCAGAGTCTCAAAGGCCGTTCGAACAAAATCTACAAACACCAAGTGGTATACCCAATGAGAATCAACCGTTTGGCTTCACTAATCCAATATCTAATGCAGTTCCAATCAATTCCTTTAGGAATCCTCCTCCACCCTCAACAGCTGGGGTAACCCCCAACCAGAGTACAGGAACTTCGAATGGAGGAGATTCTACACCTTCGAGAAGGATTACTAGAAGTCGTGTCCAACCACAACCGCAACGTGGGGCTGCGGAGGAAGATGGTTTGAGCGAGAGTGTTGTTGATGCAGAAAATAAAAGGAGGGTCGGGAGGCCAAAGGGTAAATTCCAGTCTCAAAAGAGGACACGGGGTGGCCAGGACATTAATGTTGCCTTGCCTGATGTCGACATTGATGCAATAGTTGATAATGTTCTCACCACATATACCAATACATTGAGACAAACTGATGCCAACAAGGAATCAGTTGGATATTTACTCATGTGTTATGATCTGCTACGAAGAAAGATTTCACAAATTGAAGAGATGAAGGAAGGGATACCTGGAGTGTCGAGAACAGGACGCTCTGATCTAAGGGCTGGAACTCTCTTCATGAATAAGGGAATTAGGACAAATGCCCAAAAGAGGATTGGTACAGTGCCTGGTGTTGAAGTTGGGGATATTTTCTTTTTCCGAATGGAATTGTGCTTGGTTGGATTACACGCTCCAACTATGGGTGGGATTGATTATATGGGAGTCAAGAACAGTTCAGAGGAAGAGCCCTTAGCATTAAGCATTGTTTCTTCTGGAGGGTATGAGGATCATATACAGGATGGGAATGAGTTGATATATAGTGGCCAAGGTGGCAATGCCGGCAACGATAACAGGAAAGATAAGGAAACAAAGGATCAGAAGCTTGAAAGGGGTAATCTAGCTTTGGAGAAAAGTTTGCATCGGGGTAATGATGTAAGAGTAATTCGGGGTGTTAAGGATGTTTCTAATCCAACTGGGAAGGTATATGTCTATGACGGTCTATACAAAATCCATGAATCATGGGTAGATAAAGGAAAGAGTGGTGCCAATGTATTCAAGTACAGATTGGTAAGATTACCTGGACAGCCTGAAGCGTTTACAGTATGGAAATCAATTGAGCAATGGAAAGAAACAAATACTACAAGGGTTGGATTGATATTGCCAGATCTTACTTCAGGGGCAGAAACTTTTCCCGTTTCTCTTGTAAATGATGTAGATGGAGAGAAAGGCCCTGCACACTTCACATATATTCCTAGTCTTAAGTATTCAAAACCTGTTAATCTTACAGAACCTACTGCTGGGTGTAATTGTACCGGTGGATGTCTCCCTGGTAATTCCAACTGCACTTGCATTCAGAAAAATGGAGGTTATCTCCCATATACTGCAAATGGGCTTCTTGTGAACCAAAAATCCTTATTACATGAATGTGGTCCTTCCTGCAAATGCCCTCCTAATTGTCGTAATCGTGTGTCCCAAGGTGGCTTGAAAATTCGTTTGGAAGTGTTTAAGACTAAGGATAAAGGTTGGGGTTTGAGGTCCTGGGATCCCATCCGTGCTGGTGCTTTCTTATGCGAGTATGCAGGGGAAGCTCTAAATGTTTCTGGTATAGAAAAGCTTGGGGATGACCGTGCAGATGATTACAGTTTTGATGCTAATCGTACTTGTCAGCCACTGGGAGTTCTGCCTGGTGATTCTAATGAGACTCCACATGTCCCTTTTCCTCTACTTATAAGTGCAAATACTGCCGGAAATGTTGCTCGCTTTATGAATCACAGCTGTTCTCCAAATGTGTTCTGGCAACCAATTTTACGTGAAAATAAAAATGAATCTGATTTACATGTTGCATTTTATGCGGTTGGACACATTCCTCCTATGACAGAGTTGACTTATGATTATGGGATGATCCCTTATGAGAAAGGATACCAGAGGAAGAAAATATGCCTTTGTCGGTCAATAAAGTGTAGAAGCTTCTTTTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00260 ko00310 ko01100 ko04146 ko04211 map00260 map00310 map01100 map04146 map04211

Pfam Domains

Protein Families

AT_hook Pre-SET SAD_SRA SET

Protein Analysis

734

Amino Acids

80.46

Weight (kDa)

8.57

Isoelectric Point (pI)

47.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAD_SRA	PF02182	280 - 437	1.2e-55	SAD/SRA domain
Pre-SET	PF05033	467 - 564	7.1e-24	Pre-SET motif
SET	PF00856	583 - 708	2e-17	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010169)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G05900
fragaria_vesca	FvH4_7g07980
malus_domestica	MD00G1068300.v1.1 MD12G1112200.v1.1 MD14G1101300.v1.1
prunus_persica	Prupe.7G021100_v2.0.a1 Prupe.7G021100_v2.0.a1
pyrus_communis	pycom12g09140 pycom14g08780
rosa_chinensis	RchiOBHm_Chr3g0494321 RchiOBHm_Chr3g0494471
rosa_laevigata	RLG00000022673
rosa_multiflora	Rmu_sc0000152.1_g000010
rosa_roxburghii	Rroxscaffold_6G00391110
rosa_rugosa	Rorug03G0265400
rosa_samantha	Rh3AG314800 Rh3AG315600 Rh3BG350800 Rh3CG347500 Rh3DG350100
rosa_wichuraiana	Rw3G027550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1955
AccB1I	GGYRCC	2 cut(s)	84, 1268
AccI	GTMKAC	2 cut(s)	265, 600
AciI	CCGC	4 cut(s)	165, 452, 467, 2078
AclWI	GGATC	5 cut(s)	1020, 1107, 1763, 1776, 2122
AcoI	YGGCCR	2 cut(s)	568, 1048
AcsI	RAATTY	2 cut(s)	539, 1713
AcuI	CTGAAG	2 cut(s)	1335, 1383
AcyI	GRCGYC	1 cut(s)	85
AdeI	CACNNNGTG	2 cut(s)	260, 566
AfaI	GTAC	5 cut(s)	382, 847, 1286, 1537, 1885
AfiI	CCNNNNNNNGG	7 cut(s)	38, 134, 184, 458, 837, 926, 1523
AflII	CTTAAG	1 cut(s)	1484
AflIII	ACRYGT	2 cut(s)	1933, 2062
AgeI	ACCGGT	1 cut(s)	1538
AgsI	TTSAA	6 cut(s)	734, 863, 1112, 1282, 1494, 1711
AjnI	CCWGG	9 cut(s)	31, 181, 570, 754, 853, 1303, 1552, 1763, 1909
AjuI	GAANNNNNNNTTGG	2 cut(s)	1703, 1735
AloI	GAACNNNNNNTCC	2 cut(s)	1619, 1651
AluBI	AGCT	8 cut(s)	110, 359, 1108, 1127, 1814, 1840, 2001, 2193
AluI	AGCT	8 cut(s)	110, 359, 1108, 1127, 1814, 1840, 2001, 2193
Alw26I	GTCTC	5 cut(s)	228, 552, 646, 1553, 1919
AlwI	GGATC	5 cut(s)	1020, 1107, 1763, 1776, 2122
AlwNI	CAGNNNCTG	2 cut(s)	854, 1897
AoxI	GGCC	6 cut(s)	74, 230, 527, 568, 1048, 1453
ApeKI	GCWGC	2 cut(s)	140, 464
ApoI	RAATTY	2 cut(s)	539, 1713
AseI	ATTAAT	1 cut(s)	579
AsiGI	ACCGGT	1 cut(s)	1538
Asp700I	GAANNNNTTC	2 cut(s)	721, 1413
AspLEI	GCGC	1 cut(s)	87
AspS9I	GGNCC	4 cut(s)	170, 1454, 1655, 1761
AsuHPI	GGTGA	2 cut(s)	622, 1925
AsuII	TTCGAA	2 cut(s)	237, 392
AvaII	GGWCC	3 cut(s)	170, 1655, 1761
BalI	TGGCCA	2 cut(s)	570, 1050
BamHI	GGATCC	1 cut(s)	1768
BanI	GGYRCC	2 cut(s)	84, 1268
BanII	GRGCYC	1 cut(s)	975
BarI	GAAGNNNNNNTAC	2 cut(s)	373, 405
BbvCI	CCTCAGC	1 cut(s)	106
BbvI	GCAGC	2 cut(s)	127, 451
BccI	CCATC	4 cut(s)	470, 1019, 1436, 1781
BceAI	ACGGC	1 cut(s)	217
BcgI	CGANNNNNNTGC	2 cut(s)	590, 624
BciT130I	CCWGG	9 cut(s)	33, 183, 572, 756, 855, 1305, 1554, 1765, 1911
BciVI	GTATCC	2 cut(s)	744, 2138
BcoDI	GTCTC	5 cut(s)	228, 552, 646, 1553, 1919
BfaI	CTAG	4 cut(s)	57, 429, 1124, 1479
BfoI	RGCGCY	1 cut(s)	88
BfrI	CTTAAG	1 cut(s)	1484
BfuI	GTATCC	2 cut(s)	744, 2138
BglI	GCCNNNNNGGC	2 cut(s)	82, 1056
BglII	AGATCT	1 cut(s)	1390
BisI	GCNGC	2 cut(s)	141, 465
BlsI	GCNGC	2 cut(s)	142, 466
Bme1390I	CCNGG	9 cut(s)	33, 183, 572, 756, 855, 1305, 1554, 1765, 1911
Bme18I	GGWCC	3 cut(s)	170, 1655, 1761
BmgT120I	GGNCC	4 cut(s)	170, 1454, 1655, 1761
BmiI	GGNNCC	3 cut(s)	86, 1270, 1770
BmrFI	CCNGG	9 cut(s)	33, 183, 572, 756, 855, 1305, 1554, 1765, 1911
BmrI	ACTGGG	2 cut(s)	1209, 1907
BmsI	GCATC	5 cut(s)	490, 598, 652, 1153, 1864
BmuI	ACTGGG	2 cut(s)	1209, 1907
BplI	GAGNNNNNCTC	2 cut(s)	1581, 1613
BpmI	CTGGAG	2 cut(s)	777, 1020
Bpu10I	CCTNAGC	2 cut(s)	106, 976
Bpu14I	TTCGAA	2 cut(s)	237, 392
BsaAI	YACGTR	1 cut(s)	2036
BsaBI	GATNNNNATC	1 cut(s)	1878
BsaHI	GRCGYC	1 cut(s)	85
BsaJI	CCNNGG	8 cut(s)	31, 32, 133, 182, 1051, 1552, 1699, 1764
BsaWI	WCCGGW	1 cut(s)	1538
Bsc4I	CCNNNNNNNGG	7 cut(s)	38, 134, 184, 458, 837, 926, 1523
Bse118I	RCCGGY	2 cut(s)	1064, 1538
Bse1I	ACTGG	3 cut(s)	544, 1204, 1902
Bse3DI	GCAATG	2 cut(s)	1066, 1352
Bse8I	GATNNNNATC	1 cut(s)	1878
BseBI	CCWGG	9 cut(s)	33, 183, 572, 756, 855, 1305, 1554, 1765, 1911
BseDI	CCNNGG	8 cut(s)	31, 32, 133, 182, 1051, 1552, 1699, 1764
BseGI	GGATG	7 cut(s)	73, 1030, 1189, 1550, 1773, 1852, 2130
BseJI	GATNNNNATC	1 cut(s)	1878
BseLI	CCNNNNNNNGG	7 cut(s)	38, 134, 184, 458, 837, 926, 1523
BseMI	GCAATG	2 cut(s)	1066, 1352
BseMII	CTCAG	1 cut(s)	120
BseNI	ACTGG	3 cut(s)	544, 1204, 1902
BseRI	GAGGAG	2 cut(s)	333, 414
BseXI	GCAGC	2 cut(s)	127, 451
BseYI	CCCAGC	2 cut(s)	359, 1523
BsgI	GTGCAG	3 cut(s)	1443, 1552, 1875
BshFI	GGCC	6 cut(s)	76, 232, 529, 570, 1050, 1455
BshNI	GGYRCC	2 cut(s)	84, 1268
BshTI	ACCGGT	1 cut(s)	1538
BsiSI	CCGG	3 cut(s)	1065, 1539, 1971
BslFI	GGGAC	3 cut(s)	14, 1681, 1922
BslI	CCNNNNNNNGG	7 cut(s)	38, 134, 184, 458, 837, 926, 1523
BsmAI	GTCTC	5 cut(s)	228, 552, 646, 1553, 1919
BsmFI	GGGAC	3 cut(s)	14, 1681, 1922
BsmI	GAATGC	1 cut(s)	1575
BsnI	GGCC	6 cut(s)	76, 232, 529, 570, 1050, 1455
Bsp119I	TTCGAA	2 cut(s)	237, 392
Bsp1286I	GDGCHC	1 cut(s)	975
Bsp143I	GATC	7 cut(s)	703, 781, 1012, 1099, 1390, 1768, 2127
BspACI	CCGC	4 cut(s)	165, 452, 467, 2078
BspANI	GGCC	6 cut(s)	76, 232, 529, 570, 1050, 1455
BspCNI	CTCAG	1 cut(s)	119
BspHI	TCATGA	1 cut(s)	804
BspLI	GGNNCC	3 cut(s)	86, 1270, 1770
BspPI	GGATC	5 cut(s)	1020, 1107, 1763, 1776, 2122
BspQI	GCTCTTC	1 cut(s)	963
BspT104I	TTCGAA	2 cut(s)	237, 392
BspT107I	GGYRCC	2 cut(s)	84, 1268
BspTI	CTTAAG	1 cut(s)	1484
BsrDI	GCAATG	2 cut(s)	1066, 1352
BsrFI	RCCGGY	2 cut(s)	1064, 1538
BsrI	ACTGG	3 cut(s)	544, 1204, 1902
BssAI	RCCGGY	2 cut(s)	1064, 1538
BssECI	CCNNGG	8 cut(s)	31, 32, 133, 182, 1051, 1552, 1699, 1764
BssMI	GATC	7 cut(s)	703, 781, 1012, 1099, 1390, 1768, 2127
BssNAI	GTATAC	1 cut(s)	266
BssNI	GRCGYC	1 cut(s)	85
BssT1I	CCWWGG	3 cut(s)	133, 1051, 1699
Bst1107I	GTATAC	1 cut(s)	266
Bst2UI	CCWGG	9 cut(s)	33, 183, 572, 756, 855, 1305, 1554, 1765, 1911
Bst4CI	ACNGT	8 cut(s)	11, 285, 850, 959, 1223, 1327, 1853, 1868
Bst6I	CTCTTC	3 cut(s)	729, 806, 963
BstACI	GRCGYC	1 cut(s)	85
BstAFI	CTTAAG	1 cut(s)	1484
BstAPI	GCANNNNNTGC	2 cut(s)	1967, 2075
BstBAI	YACGTR	1 cut(s)	2036
BstBI	TTCGAA	2 cut(s)	237, 392
BstC8I	GCNNGC	2 cut(s)	1066, 1984
BstDEI	CTNAG	4 cut(s)	106, 785, 976, 1737
BstEII	GGTNACC	1 cut(s)	364
BstF5I	GGATG	7 cut(s)	73, 1030, 1189, 1550, 1773, 1852, 2130
BstH2I	RGCGCY	1 cut(s)	88
BstHHI	GCGC	1 cut(s)	87
BstKTI	GATC	7 cut(s)	706, 784, 1015, 1102, 1393, 1771, 2130
BstMAI	GTCTC	5 cut(s)	228, 552, 646, 1553, 1919
BstMBI	GATC	7 cut(s)	703, 781, 1012, 1099, 1390, 1768, 2127
BstMWI	GCNNNNNNNGC	7 cut(s)	82, 164, 1056, 1065, 1811, 1967, 2075
BstNI	CCWGG	9 cut(s)	33, 183, 572, 756, 855, 1305, 1554, 1765, 1911
BstNSI	RCATGY	2 cut(s)	1937, 2066
BstPI	GGTNACC	1 cut(s)	364
BstSCI	CCNGG	9 cut(s)	31, 181, 570, 754, 853, 1303, 1552, 1763, 1909
BstV1I	GCAGC	2 cut(s)	127, 451
BstX2I	RGATCY	2 cut(s)	1390, 1768
BstYI	RGATCY	2 cut(s)	1390, 1768
BstZ17I	GTATAC	1 cut(s)	266
BsuI	GTATCC	2 cut(s)	744, 2138
BsuRI	GGCC	6 cut(s)	76, 232, 529, 570, 1050, 1455
BtsCI	GGATG	7 cut(s)	73, 1030, 1189, 1550, 1773, 1852, 2130
BtsIMutI	CAGTG	2 cut(s)	855, 1895
Cac8I	GCNNGC	2 cut(s)	1066, 1984
CaiI	CAGNNNCTG	2 cut(s)	854, 1897
CciI	TCATGA	1 cut(s)	804
CfoI	GCGC	1 cut(s)	87
Cfr10I	RCCGGY	2 cut(s)	1064, 1538
Cfr13I	GGNCC	4 cut(s)	170, 1454, 1655, 1761
CseI	GACGC	1 cut(s)	783
Csp6I	GTAC	5 cut(s)	381, 846, 1285, 1536, 1884
CspAI	ACCGGT	1 cut(s)	1538
CviAII	CATG	7 cut(s)	694, 805, 1238, 1245, 1646, 1934, 2063
CviQI	GTAC	5 cut(s)	381, 846, 1285, 1536, 1884
DdeI	CTNAG	4 cut(s)	106, 785, 976, 1737
DinI	GGCGCC	1 cut(s)	86
DpnI	GATC	7 cut(s)	705, 783, 1014, 1101, 1392, 1770, 2129
DpnII	GATC	7 cut(s)	703, 781, 1012, 1099, 1390, 1768, 2127
DraIII	CACNNNGTG	2 cut(s)	260, 566
EaeI	YGGCCR	2 cut(s)	568, 1048
Eam1104I	CTCTTC	3 cut(s)	729, 806, 963
EarI	CTCTTC	3 cut(s)	729, 806, 963
Eco130I	CCWWGG	3 cut(s)	133, 1051, 1699
Eco147I	AGGCCT	1 cut(s)	76
Eco24I	GRGCYC	1 cut(s)	975
Eco47I	GGWCC	3 cut(s)	170, 1655, 1761
Eco57I	CTGAAG	2 cut(s)	1335, 1383
Eco91I	GGTNACC	1 cut(s)	364
EcoO109I	RGGNCCY	2 cut(s)	1454, 1761
EcoO65I	GGTNACC	1 cut(s)	364
EcoRII	CCWGG	9 cut(s)	31, 181, 570, 754, 853, 1303, 1552, 1763, 1909
EcoT14I	CCWWGG	3 cut(s)	133, 1051, 1699
EcoT38I	GRGCYC	1 cut(s)	975
EgeI	GGCGCC	1 cut(s)	86
EheI	GGCGCC	1 cut(s)	86
ErhI	CCWWGG	3 cut(s)	133, 1051, 1699
FaeI	CATG	7 cut(s)	697, 808, 1241, 1248, 1649, 1937, 2066
FaqI	GGGAC	3 cut(s)	14, 1681, 1922
FatI	CATG	7 cut(s)	693, 804, 1237, 1244, 1645, 1933, 2062
FauI	CCCGC	1 cut(s)	172
FblI	GTMKAC	2 cut(s)	265, 600
Fnu4HI	GCNGC	2 cut(s)	141, 465
FokI	GGATG	7 cut(s)	80, 1037, 1196, 1557, 1760, 1859, 2137
FriOI	GRGCYC	1 cut(s)	975
Fsp4HI	GCNGC	2 cut(s)	141, 465
FspBI	CTAG	4 cut(s)	57, 429, 1124, 1479
GlaI	GCGC	1 cut(s)	86
GluI	GCNGC	2 cut(s)	141, 465
GsaI	CCCAGC	2 cut(s)	363, 1527
GsuI	CTGGAG	2 cut(s)	777, 1020
HaeII	RGCGCY	1 cut(s)	88
HaeIII	GGCC	6 cut(s)	76, 232, 529, 570, 1050, 1455
HapII	CCGG	3 cut(s)	1065, 1539, 1971
HgaI	GACGC	1 cut(s)	783
HhaI	GCGC	1 cut(s)	87
Hin1I	GRCGYC	1 cut(s)	85
Hin1II	CATG	7 cut(s)	697, 808, 1241, 1248, 1649, 1937, 2066
Hin6I	GCGC	1 cut(s)	85
HinP1I	GCGC	1 cut(s)	85
HincII	GTYRAC	2 cut(s)	601, 2109
HindII	GTYRAC	2 cut(s)	601, 2109
HindIII	AAGCTT	3 cut(s)	1106, 1838, 2191
HpaII	CCGG	3 cut(s)	1065, 1539, 1971
HphI	GGTGA	2 cut(s)	622, 1925
Hpy166II	GTNNAC	5 cut(s)	266, 601, 1323, 1627, 2109
Hpy188I	TCNGA	7 cut(s)	220, 781, 887, 964, 1104, 1581, 2056
Hpy188III	TCNNGA	7 cut(s)	20, 417, 523, 765, 805, 952, 999
Hpy8I	GTNNAC	5 cut(s)	266, 601, 1323, 1627, 2109
HpyAV	CCTTC	6 cut(s)	414, 423, 736, 740, 1198, 1668
HpyCH4III	ACNGT	8 cut(s)	11, 285, 850, 959, 1223, 1327, 1853, 1868
HpyCH4IV	ACGT	2 cut(s)	457, 2035
HpyF10VI	GCNNNNNNNGC	7 cut(s)	82, 164, 1056, 1065, 1811, 1967, 2075
HpyF3I	CTNAG	4 cut(s)	106, 785, 976, 1737
HpySE526I	ACGT	2 cut(s)	457, 2035
Hsp92I	GRCGYC	1 cut(s)	85
Hsp92II	CATG	7 cut(s)	697, 808, 1241, 1248, 1649, 1937, 2066
HspAI	GCGC	1 cut(s)	85
KasI	GGCGCC	1 cut(s)	84
KroI	GCCGGC	1 cut(s)	1064
KroNI	GCCGGC	1 cut(s)	1066
Kzo9I	GATC	7 cut(s)	703, 781, 1012, 1099, 1390, 1768, 2127
LguI	GCTCTTC	1 cut(s)	963
LmnI	GCTCC	2 cut(s)	148, 922
Lsp1109I	GCAGC	2 cut(s)	127, 451
LweI	GCATC	5 cut(s)	490, 598, 652, 1153, 1864
MaeI	CTAG	4 cut(s)	57, 429, 1124, 1479
MaeII	ACGT	2 cut(s)	457, 2035
MaeIII	GTNAC	1 cut(s)	364
MalI	GATC	7 cut(s)	705, 783, 1014, 1101, 1392, 1770, 2129
MboI	GATC	7 cut(s)	703, 781, 1012, 1099, 1390, 1768, 2127
MboII	GAAGA	8 cut(s)	105, 485, 726, 746, 793, 980, 987, 2167
MfeI	CAATTG	1 cut(s)	1338
MflI	RGATCY	2 cut(s)	1390, 1768
MhlI	GDGCHC	1 cut(s)	975
MlsI	TGGCCA	2 cut(s)	570, 1050
MluNI	TGGCCA	2 cut(s)	570, 1050
Mly113I	GGCGCC	1 cut(s)	85
MlyI	GAGTC	4 cut(s)	17, 230, 957, 1921
MmeI	TCCRAC	8 cut(s)	466, 661, 886, 944, 1220, 1354, 1587, 2062
Mox20I	TGGCCA	2 cut(s)	570, 1050
MroNI	GCCGGC	1 cut(s)	1064
MroXI	GAANNNNTTC	2 cut(s)	721, 1413
MscI	TGGCCA	2 cut(s)	570, 1050
MseI	TTAA	6 cut(s)	579, 983, 1179, 1485, 1503, 1731
MslI	CAYNNNNRTG	1 cut(s)	1650
Msp20I	TGGCCA	2 cut(s)	570, 1050
MspA1I	CMGCKG	3 cut(s)	167, 359, 2001
MspCI	CTTAAG	1 cut(s)	1484
MspI	CCGG	3 cut(s)	1065, 1539, 1971
MspR9I	CCNGG	9 cut(s)	33, 183, 572, 756, 855, 1305, 1554, 1765, 1911
MunI	CAATTG	1 cut(s)	1338
Mva1269I	GAATGC	1 cut(s)	1575
MvaI	CCWGG	9 cut(s)	33, 183, 572, 756, 855, 1305, 1554, 1765, 1911
MwoI	GCNNNNNNNGC	7 cut(s)	82, 164, 1056, 1065, 1811, 1967, 2075
NaeI	GCCGGC	1 cut(s)	1066
NarI	GGCGCC	1 cut(s)	85
NdeII	GATC	7 cut(s)	703, 781, 1012, 1099, 1390, 1768, 2127
NgoMIV	GCCGGC	1 cut(s)	1064
NlaIII	CATG	7 cut(s)	697, 808, 1241, 1248, 1649, 1937, 2066
NlaIV	GGNNCC	3 cut(s)	86, 1270, 1770
NspI	RCATGY	2 cut(s)	1937, 2066
NspV	TTCGAA	2 cut(s)	237, 392
PagI	TCATGA	1 cut(s)	804
PasI	CCCWGGG	1 cut(s)	32
PceI	AGGCCT	1 cut(s)	76
PciI	ACATGT	2 cut(s)	1933, 2062
PciSI	GCTCTTC	1 cut(s)	963
PctI	GAATGC	1 cut(s)	1575
PdiI	GCCGGC	1 cut(s)	1066
PdmI	GAANNNNTTC	2 cut(s)	721, 1413
PfeI	GAWTC	8 cut(s)	277, 337, 404, 674, 1241, 1916, 1993, 2051
PflFI	GACNNNGTC	1 cut(s)	26
PinAI	ACCGGT	1 cut(s)	1538
PkrI	GCNGC	2 cut(s)	142, 466
PleI	GAGTC	4 cut(s)	17, 229, 956, 1921
PluTI	GGCGCC	1 cut(s)	88
PpsI	GAGTC	4 cut(s)	17, 229, 956, 1921
Ppu21I	YACGTR	1 cut(s)	2036
PpuMI	RGGWCCY	1 cut(s)	1761
PscI	ACATGT	2 cut(s)	1933, 2062
PshBI	ATTAAT	1 cut(s)	579
PsiI	TTATAA	1 cut(s)	1955
Psp5II	RGGWCCY	1 cut(s)	1761
Psp6I	CCWGG	9 cut(s)	31, 181, 570, 754, 853, 1303, 1552, 1763, 1909
PspEI	GGTNACC	1 cut(s)	364
PspFI	CCCAGC	2 cut(s)	359, 1523
PspGI	CCWGG	9 cut(s)	31, 181, 570, 754, 853, 1303, 1552, 1763, 1909
PspN4I	GGNNCC	3 cut(s)	86, 1270, 1770
PspPI	GGNCC	4 cut(s)	170, 1454, 1655, 1761
PspPPI	RGGWCCY	1 cut(s)	1761
PsrI	GAACNNNNNNTAC	2 cut(s)	231, 263
PstNI	CAGNNNCTG	2 cut(s)	854, 1897
PsuI	RGATCY	2 cut(s)	1390, 1768
PsyI	GACNNNGTC	1 cut(s)	26
PvuII	CAGCTG	2 cut(s)	359, 2001
RsaI	GTAC	5 cut(s)	382, 847, 1286, 1537, 1885
RsaNI	GTAC	5 cut(s)	381, 846, 1285, 1536, 1884
RseI	CAYNNNNRTG	1 cut(s)	1650
SalI	GTCGAC	1 cut(s)	599
SapI	GCTCTTC	1 cut(s)	963
SaqAI	TTAA	6 cut(s)	579, 983, 1179, 1485, 1503, 1731
SatI	GCNGC	2 cut(s)	141, 465
Sau3AI	GATC	7 cut(s)	703, 781, 1012, 1099, 1390, 1768, 2127
Sau96I	GGNCC	4 cut(s)	170, 1454, 1655, 1761
SchI	GAGTC	4 cut(s)	17, 230, 957, 1921
ScrFI	CCNGG	9 cut(s)	33, 183, 572, 756, 855, 1305, 1554, 1765, 1911
SduI	GDGCHC	1 cut(s)	975
SfaNI	GCATC	5 cut(s)	490, 598, 652, 1153, 1864
SfoI	GGCGCC	1 cut(s)	86
SfuI	TTCGAA	2 cut(s)	237, 392
SinI	GGWCC	3 cut(s)	170, 1655, 1761
SmiMI	CAYNNNNRTG	1 cut(s)	1650
SmlI	CTYRAG	1 cut(s)	1484
SmoI	CTYRAG	1 cut(s)	1484
SseBI	AGGCCT	1 cut(s)	76
SsiI	CCGC	4 cut(s)	165, 452, 467, 2078
SspDI	GGCGCC	1 cut(s)	84
SspMI	CTAG	4 cut(s)	57, 429, 1124, 1479
StuI	AGGCCT	1 cut(s)	76
StyD4I	CCNGG	9 cut(s)	31, 181, 570, 754, 853, 1303, 1552, 1763, 1909
StyI	CCWWGG	3 cut(s)	133, 1051, 1699
TaaI	ACNGT	8 cut(s)	11, 285, 850, 959, 1223, 1327, 1853, 1868
TaiI	ACGT	2 cut(s)	460, 2038
TaqI	TCGA	6 cut(s)	122, 237, 392, 416, 600, 764
TaqII	GACCGA	1 cut(s)	2163
TatI	WGTACW	2 cut(s)	380, 1284
TfiI	GAWTC	8 cut(s)	277, 337, 404, 674, 1241, 1916, 1993, 2051
Tru1I	TTAA	6 cut(s)	579, 983, 1179, 1485, 1503, 1731
Tru9I	TTAA	6 cut(s)	579, 983, 1179, 1485, 1503, 1731
TscAI	CASTG	2 cut(s)	855, 1902
TseI	GCWGC	2 cut(s)	140, 464
TspGWI	ACGGA	1 cut(s)	1766
TspRI	CASTG	2 cut(s)	855, 1902
Tth111I	GACNNNGTC	1 cut(s)	26
Vha464I	CTTAAG	1 cut(s)	1484
VpaK11BI	GGWCC	3 cut(s)	170, 1655, 1761
VspI	ATTAAT	1 cut(s)	579
XapI	RAATTY	2 cut(s)	539, 1713
XceI	RCATGY	2 cut(s)	1937, 2066
XcmI	CCANNNNNNNNNTGG	2 cut(s)	839, 2016
XmiI	GTMKAC	2 cut(s)	265, 600
XmnI	GAANNNNTTC	2 cut(s)	721, 1413
XspI	CTAG	4 cut(s)	57, 429, 1124, 1479

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.