pycom12g15620
MYB Family

Target of Myb protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Forward (+)
18089259 .. 18089537
279 bp
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UTR
Exon/CDS
Intron
pycom12g15620.1

Sequence Viewer

Length: 279 bp
ATGTGTCCTCCTCAGTATGCAACAACCTCTGCATATTCAGTACTCCAAAATGGTTCATCTGTTATCCCTGAATCAAATGACTTTAAAGCATGGATAACACATGATTATGCTTTCATGTTGCTCCTTATTGCAACACTTTATTCATCCACAATTTCCGCTGTGATTGGTAGCAGGAGCTCTCGAGAGATGTGGGTTCCTCTCCAAAATCATTTTTTCTTAACAAGTATAAAAATCAGTATAATCAAGTTACATACTTATCTTTACAACATGAAGAAATGA

Protein Analysis

93

Amino Acids

10.48

Weight (kDa)

9.17

Isoelectric Point (pI)

37.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 156
AfaI GTAC 1 cut(s) 42
AluBI AGCT 1 cut(s) 177
AluI AGCT 1 cut(s) 177
Alw21I GWGCWC 1 cut(s) 179
Ama87I CYCGRG 1 cut(s) 180
AvaI CYCGRG 1 cut(s) 180
BanII GRGCYC 1 cut(s) 179
Bbv12I GWGCWC 1 cut(s) 179
BmcAI AGTACT 1 cut(s) 42
BmeT110I CYCGRG 1 cut(s) 180
BmiI GGNNCC 1 cut(s) 195
BseGI GGATG 1 cut(s) 143
BseMII CTCAG 1 cut(s) 26
BsiHKAI GWGCWC 1 cut(s) 179
BsiHKCI CYCGRG 1 cut(s) 180
BsoBI CYCGRG 1 cut(s) 180
Bsp1286I GDGCHC 1 cut(s) 179
BspACI CCGC 1 cut(s) 156
BspCNI CTCAG 1 cut(s) 25
BspLI GGNNCC 1 cut(s) 195
BstDEI CTNAG 1 cut(s) 12
BstF5I GGATG 1 cut(s) 143
BtsCI GGATG 1 cut(s) 143
Csp6I GTAC 1 cut(s) 41
CviAII CATG 4 cut(s) 90, 101, 115, 268
CviJI RGCY 1 cut(s) 177
CviKI_1 RGCY 1 cut(s) 177
CviQI GTAC 1 cut(s) 41
DdeI CTNAG 1 cut(s) 12
DraI TTTAAA 1 cut(s) 85
Ecl136II GAGCTC 1 cut(s) 177
Eco24I GRGCYC 1 cut(s) 179
Eco53kI GAGCTC 1 cut(s) 177
Eco88I CYCGRG 1 cut(s) 180
EcoICRI GAGCTC 1 cut(s) 177
EcoT38I GRGCYC 1 cut(s) 179
FaeI CATG 4 cut(s) 93, 104, 118, 271
FatI CATG 4 cut(s) 89, 100, 114, 267
FokI GGATG 1 cut(s) 130
FriOI GRGCYC 1 cut(s) 179
Hin1II CATG 4 cut(s) 93, 104, 118, 271
HinfI GANTC 1 cut(s) 71
Hpy188III TCNNGA 2 cut(s) 180, 182
HpyCH4V TGCA 3 cut(s) 20, 32, 131
HpyF3I CTNAG 1 cut(s) 12
Hsp92II CATG 4 cut(s) 93, 104, 118, 271
LmnI GCTCC 2 cut(s) 126, 174
LpnPI CCDG 2 cut(s) 81, 157
MaeIII GTNAC 1 cut(s) 246
MhlI GDGCHC 1 cut(s) 179
MluCI AATT 1 cut(s) 150
MnlI CCTC 4 cut(s) 18, 21, 37, 207
MseI TTAA 2 cut(s) 84, 218
MslI CAYNNNNRTG 1 cut(s) 105
MspA1I CMGCKG 1 cut(s) 158
NlaIII CATG 4 cut(s) 93, 104, 118, 271
NlaIV GGNNCC 1 cut(s) 195
PaeR7I CTCGAG 1 cut(s) 180
PfeI GAWTC 1 cut(s) 71
Psp124BI GAGCTC 1 cut(s) 179
PspN4I GGNNCC 1 cut(s) 195
RsaI GTAC 1 cut(s) 42
RsaNI GTAC 1 cut(s) 41
RseI CAYNNNNRTG 1 cut(s) 105
SacI GAGCTC 1 cut(s) 179
SaqAI TTAA 2 cut(s) 84, 218
ScaI AGTACT 1 cut(s) 42
SduI GDGCHC 1 cut(s) 179
SetI ASST 2 cut(s) 29, 179
Sfr274I CTCGAG 1 cut(s) 180
SgeI CNNG 9 cut(s) 80, 102, 113, 127, 184, 192, 194, 234, 256
SlaI CTCGAG 1 cut(s) 180
SmiMI CAYNNNNRTG 1 cut(s) 105
SmlI CTYRAG 1 cut(s) 180
SmoI CTYRAG 1 cut(s) 180
Sse9I AATT 1 cut(s) 150
SsiI CCGC 1 cut(s) 156
SstI GAGCTC 1 cut(s) 179
TaqI TCGA 1 cut(s) 181
TasI AATT 1 cut(s) 150
TatI WGTACW 1 cut(s) 40
TfiI GAWTC 1 cut(s) 71
Tru1I TTAA 2 cut(s) 84, 218
Tru9I TTAA 2 cut(s) 84, 218
TspDTI ATGAA 3 cut(s) 45, 103, 132
XhoI CTCGAG 1 cut(s) 180
ZrmI AGTACT 1 cut(s) 42
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.