Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G02620 |
| fragaria_vesca | FvH4_6g02960 |
| malus_domestica | MD04G1224300.v1.1 MD12G1241000.v1.1 |
| prunus_persica | Prupe.5G006500_v2.0.a1 Prupe.5G006500_v2.0.a1 Prupe.6G005500_v2.0.a1 |
| pyrus_communis | pycom04g19760 pycom12g22070 |
| rosa_chinensis | RchiOBHm_Chr3g0451151 |
| rosa_laevigata | RLG00000025685 |
| rosa_multiflora | Rmu_ssc0000028.1_g000004 |
| rosa_roxburghii | Rroxscaffold_6G00428620 |
| rosa_rugosa | Rorug02G0632000 |
| rosa_samantha | Rh3AG034800 Rh3BG035200 Rh3CG033700 Rh3DG034800 |
| rosa_wichuraiana | Rw3G002540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclI | AACGTT | 1 cut(s) | 54 |
| AclWI | GGATC | 2 cut(s) | 255, 264 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 253 |
| AgsI | TTSAA | 3 cut(s) | 96, 119, 130 |
| AluBI | AGCT | 3 cut(s) | 41, 213, 233 |
| AluI | AGCT | 3 cut(s) | 41, 213, 233 |
| AlwI | GGATC | 2 cut(s) | 255, 264 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 16, 48 |
| AsuNHI | GCTAGC | 1 cut(s) | 37 |
| BclI | TGATCA | 1 cut(s) | 168 |
| BfaI | CTAG | 2 cut(s) | 38, 203 |
| BmiI | GGNNCC | 1 cut(s) | 228 |
| BmsI | GCATC | 1 cut(s) | 112 |
| BmtI | GCTAGC | 1 cut(s) | 41 |
| BpmI | CTGGAG | 1 cut(s) | 63 |
| Bsa29I | ATCGAT | 1 cut(s) | 259 |
| BsaJI | CCNNGG | 1 cut(s) | 252 |
| BsaWI | WCCGGW | 1 cut(s) | 26 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 253 |
| Bse118I | RCCGGY | 1 cut(s) | 223 |
| Bse3DI | GCAATG | 1 cut(s) | 153 |
| BseCI | ATCGAT | 1 cut(s) | 259 |
| BseDI | CCNNGG | 1 cut(s) | 252 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 253 |
| BseMI | GCAATG | 1 cut(s) | 153 |
| BshVI | ATCGAT | 1 cut(s) | 259 |
| BsiSI | CCGG | 2 cut(s) | 27, 224 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 253 |
| BsmI | GAATGC | 1 cut(s) | 125 |
| Bsp143I | GATC | 3 cut(s) | 168, 256, 260 |
| BspDI | ATCGAT | 1 cut(s) | 259 |
| BspLI | GGNNCC | 1 cut(s) | 228 |
| BspOI | GCTAGC | 1 cut(s) | 41 |
| BspPI | GGATC | 2 cut(s) | 255, 264 |
| BsrDI | GCAATG | 1 cut(s) | 153 |
| BsrFI | RCCGGY | 1 cut(s) | 223 |
| BssAI | RCCGGY | 1 cut(s) | 223 |
| BssECI | CCNNGG | 1 cut(s) | 252 |
| BssMI | GATC | 3 cut(s) | 168, 256, 260 |
| BssT1I | CCWWGG | 1 cut(s) | 252 |
| Bst4CI | ACNGT | 2 cut(s) | 22, 106 |
| BstC8I | GCNNGC | 1 cut(s) | 39 |
| BstKTI | GATC | 3 cut(s) | 171, 259, 263 |
| BstMBI | GATC | 3 cut(s) | 168, 256, 260 |
| Bsu15I | ATCGAT | 1 cut(s) | 259 |
| BsuTUI | ATCGAT | 1 cut(s) | 259 |
| BtsIMutI | CAGTG | 2 cut(s) | 18, 111 |
| Cac8I | GCNNGC | 1 cut(s) | 39 |
| Cfr10I | RCCGGY | 1 cut(s) | 223 |
| ClaI | ATCGAT | 1 cut(s) | 259 |
| CviAII | CATG | 1 cut(s) | 190 |
| CviJI | RGCY | 5 cut(s) | 41, 174, 213, 223, 233 |
| CviKI_1 | RGCY | 5 cut(s) | 41, 174, 213, 223, 233 |
| DpnI | GATC | 3 cut(s) | 170, 258, 262 |
| DpnII | GATC | 3 cut(s) | 168, 256, 260 |
| Eco130I | CCWWGG | 1 cut(s) | 252 |
| EcoT14I | CCWWGG | 1 cut(s) | 252 |
| EcoT22I | ATGCAT | 1 cut(s) | 127 |
| ErhI | CCWWGG | 1 cut(s) | 252 |
| FaeI | CATG | 1 cut(s) | 193 |
| FaiI | YATR | 3 cut(s) | 180, 191, 268 |
| FatI | CATG | 1 cut(s) | 189 |
| FbaI | TGATCA | 1 cut(s) | 168 |
| FspBI | CTAG | 2 cut(s) | 38, 203 |
| GsuI | CTGGAG | 1 cut(s) | 63 |
| HapII | CCGG | 2 cut(s) | 27, 224 |
| Hin1II | CATG | 1 cut(s) | 193 |
| HincII | GTYRAC | 1 cut(s) | 58 |
| HindII | GTYRAC | 1 cut(s) | 58 |
| HinfI | GANTC | 1 cut(s) | 92 |
| HpaII | CCGG | 2 cut(s) | 27, 224 |
| Hpy166II | GTNNAC | 2 cut(s) | 58, 138 |
| Hpy188III | TCNNGA | 1 cut(s) | 166 |
| Hpy8I | GTNNAC | 2 cut(s) | 58, 138 |
| HpyAV | CCTTC | 5 cut(s) | 433, 627, 1123, 1558, 1934 |
| HpyCH4III | ACNGT | 2 cut(s) | 22, 106 |
| HpyCH4IV | ACGT | 1 cut(s) | 54 |
| HpyCH4V | TGCA | 3 cut(s) | 125, 158, 185 |
| HpySE526I | ACGT | 1 cut(s) | 54 |
| Hsp92II | CATG | 1 cut(s) | 193 |
| Ksp22I | TGATCA | 1 cut(s) | 168 |
| Kzo9I | GATC | 3 cut(s) | 168, 256, 260 |
| LpnPI | CCDG | 4 cut(s) | 27, 40, 237, 243 |
| LweI | GCATC | 1 cut(s) | 112 |
| MaeI | CTAG | 2 cut(s) | 38, 203 |
| MaeII | ACGT | 1 cut(s) | 54 |
| MaeIII | GTNAC | 2 cut(s) | 22, 50 |
| MalI | GATC | 3 cut(s) | 170, 258, 262 |
| MboI | GATC | 3 cut(s) | 168, 256, 260 |
| MboII | GAAGA | 2 cut(s) | 78, 131 |
| MfeI | CAATTG | 1 cut(s) | 159 |
| MluCI | AATT | 3 cut(s) | 76, 114, 159 |
| MnlI | CCTC | 1 cut(s) | 7 |
| Mph1103I | ATGCAT | 1 cut(s) | 127 |
| MspI | CCGG | 2 cut(s) | 27, 224 |
| MunI | CAATTG | 1 cut(s) | 159 |
| Mva1269I | GAATGC | 1 cut(s) | 125 |
| NdeII | GATC | 3 cut(s) | 168, 256, 260 |
| NheI | GCTAGC | 1 cut(s) | 37 |
| NlaIII | CATG | 1 cut(s) | 193 |
| NlaIV | GGNNCC | 1 cut(s) | 228 |
| NmuCI | GTSAC | 1 cut(s) | 22 |
| NsiI | ATGCAT | 1 cut(s) | 127 |
| PctI | GAATGC | 1 cut(s) | 125 |
| PfeI | GAWTC | 1 cut(s) | 92 |
| Psp1406I | AACGTT | 1 cut(s) | 54 |
| PspN4I | GGNNCC | 1 cut(s) | 228 |
| Sau3AI | GATC | 3 cut(s) | 168, 256, 260 |
| SetI | ASST | 5 cut(s) | 43, 57, 200, 215, 235 |
| SfaNI | GCATC | 1 cut(s) | 112 |
| Sse9I | AATT | 3 cut(s) | 76, 114, 159 |
| SspMI | CTAG | 2 cut(s) | 38, 203 |
| StyI | CCWWGG | 1 cut(s) | 252 |
| TaaI | ACNGT | 2 cut(s) | 22, 106 |
| TaiI | ACGT | 1 cut(s) | 57 |
| TaqI | TCGA | 2 cut(s) | 207, 259 |
| TasI | AATT | 3 cut(s) | 76, 114, 159 |
| TfiI | GAWTC | 1 cut(s) | 92 |
| TscAI | CASTG | 2 cut(s) | 25, 111 |
| TseFI | GTSAC | 1 cut(s) | 22 |
| Tsp45I | GTSAC | 1 cut(s) | 22 |
| TspRI | CASTG | 2 cut(s) | 25, 111 |
| XspI | CTAG | 2 cut(s) | 38, 203 |
| Zsp2I | ATGCAT | 1 cut(s) | 127 |