pycom13g00840

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0013265
Physical Location & Seq
Forward (+)
527938 .. 531645
3708 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2475 bp
ATGAGATCTTTACGGAAATTTTCACTCAGGCCCTTCATAATAGTTCAGCCTCATCATCATACACTTCCTCGTTCTCTCAATCTTTCTCTCTGTAAGCTTGCGCATTTTTGTGGCGGCTCTTCTTCAAGATTGGATCGGCCTCTCTCTCTCTCTCTCTCTCTCCCCCCTCCCCCTTCTTTCTCCCTCGCTTGGAATCGATCTGATTCCGTTACGATACGCCGGAGTTTCAACCGAACAATCGCCATGGTAGTCGGCGCACATCCACAGCCGCAACCACAACAGCAGCAGCAGCTACAACAGAAACCGGCGCAGCAACCGGAGACTTCAGCTGAAGAGGAGGCCTTGAAGAGGAACACGGATTGCGTCTACTTTCTCGCGTCGCCTCTCACATGCAAAAAGGGAAGTGAATGTGAATATAGACACAGTGAATATGCTCGTGTCAACCCCAGGGATTGCTGGTACTGGTTGAATGGCAGTTGCTTGAATTTGAAATGCGCGTTTCGGCACCCACCTCTTGATGGATTGTTAGGAAGCCCAGCTGCAAATTCTGCTGGACCTTCTTTGTCTCTATCACATCCTGGGGTTACGCCTACAACGCCTGCAACTCATGCTGCTTATAACCCAAGTAAACAAGCAGTCCCCTGTATTTTCTTCCAAAAGGGGCAATGTTTAAAGGGTGAAAAATGTGCCTTTTCTCACGGACCAAATCCTATGGCTAATAGTAAAGTTCTGCGGACACCAGCTGCTCCCCACGGTACGGAGCCTTCAGGTCTTAAGAAGGCTTTTGGTGGCCTTCAAAAGTGCACTCAAGAGTTGAAGGTTCCCAAGGCAAGTGTTGCAAAGTCTGTTGGAGTGCCTCCTGAAGCTAAACCAGCTCCAAAAATTCCGACTGCACCAATTAGAAATGGAGTTAGCATTGAGAGGAATGTGCTGTCAACGAAAGCATTGGATGATGAGGCTCTCAGATACAAGGCAACAAGTGTTCCCCCTGTTATCAATGGAGGCTCAACAAGTCAGGCCAATCATTTACCTCAGGTTCATGTTTCAGATTATCATGGTTTTCAAAATGTGAAGGATGTTGATGAGCATTTGAGGGAGTCTTCCCCTGGATTTGATGTTCTTGTAGATGATGAGCTCGGAGATTCTGATTACTACCACGGTGAAGATCGGTTCGGAAGAACAAGAGGTCATGAGGGAAGGAACTTGAATTCTGTGAACGAATATGATTTGGACCGTCCTGTTGATTACACTTCAATGGCTGATGTCGATCGAGAAAGGTTTTGTGACCCACAAGGCTATGACCCTTATGATCGCATGCAAGGGCAATACGCATGGGACCAGCACAGGGCTTCATCTGAGAGACAGTTAGTGGGTCCTGCTCGTCTTGAGAGGAGGGGTTATCGCAAATCTGAGAGTCCAGAGAACATTGATGAGTTAGATCTGCGACATCGTTTATCTAAGCATAGGAGGGTAAACGGTCTGAGATCCATCGTCAGCCATGACTATGTAGTAGATGGTCATGTTGAGGAGCGGAACAACCGTCCTCTTAGGGATTCACAGCAGTTGCCCCCACATGAGGGCTCCCGTAGTAGTCGTCTTCATGGTAGAATAAGGCTTCCAGGCGGGTCTTCTCCAGTCAATGGTAGTGACTTGCACCAAGAAAGGGAAGTTGACAGAGCTAGGAGTCAAGGCAGATTGTCACCCAGGAGGCCTCAGATATCCTCCCACCAAGGAAGGCTTCGAGACAGAATTAAAGGAAGGGCGGAAGAGGACTACAATAATGAGAGGAGAAATTTTGGTGCTCCTCTTGTTAGGAGAGAGATAATGGATGACCGAGGTGATGACTTTTCTCGTCCAAAGCGTCTTCCAGATCTGAAAGTTGTGAAAGATGGAGAAAATAAGGAGCAATCTTACCTTGGAAAACGGAAAAGTGTGATGGATAATAATAATCTTGCGGTAGGTGATCTTTCATTTGAAGGGCCAAAGCCTCTCAGTGAAATTCTGAAGAGGAAGAGAGAAGCTGAAGCAGCAGCAGCTTCTGGGAGCAGGAAATCTTCTGCCCACGACAAACGAGGCAATAATCAGAGAGAAAGCAGGGAGAGCAATCAAGGCAACTCCCAGACTGTAGTTACAGAGATGAATAACAGTCTGCCCCCTGCAGCGAAGGAAGAGCCCAAGCTTGCAACGGCTGATGCAGTTGGAACTGAAGGTGAAAAAATTGACGTGGCTCCTGGTCAATCTTCAGAAGGACATGAAGTTGGAGAGGCCGAGGCCGAGGCCGAAGAGGGGATGATTTATGAGGAAAATGAAATCGAAGGTGAAGATCCGAGGGAAGGAGAGTATGATTACGAGCAGGGGGATGAGGGTGACTATAATTATGAAGAAGGTGAAAATGCAGAGGGCGAAGAGGAATACCTGGAAGAAGATGAAGACGGGGATGACTTTGCTAAGAAGATCGGTGTCATGTTTTCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CCCH_2 zf-CCCH_3

Protein Analysis

825

Amino Acids

91.87

Weight (kDa)

6.15

Isoelectric Point (pI)

55.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCCH_3 PF15663 116 - 170 5.2e-10 Zinc-finger containing family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013265)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G02160
fragaria_vesca FvH4_5g18690 FvH4_5g18690
malus_domestica MD16G1008200.v1.1
prunus_persica Prupe.1G342700_v2.0.a1
pyrus_communis pycom13g00840 pycom16g00800 pycom16g00810
rosa_chinensis RchiOBHm_Chr7g0176801
rosa_laevigata RLG00000005584
rosa_multiflora Rmu_sc0005162.1_g000002
rosa_roxburghii Rroxscaffold_3G00276400
rosa_rugosa Rorug06G0401100
rosa_samantha Rh7AG000100 Rh7BG000300 Rh7CG000100 Rh7DG000400
rosa_wichuraiana Rw7G000010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 618
Acc16I TGCGCA 1 cut(s) 102
AccB1I GGYRCC 1 cut(s) 504
AccB7I CCANNNNNTGG 1 cut(s) 1640
AccBSI CCGCTC 1 cut(s) 1531
AccI GTMKAC 1 cut(s) 366
AccII CGCG 2 cut(s) 377, 497
AciI CCGC 7 cut(s) 114, 269, 733, 1531, 1623, 1763, 1955
AclWI GGATC 3 cut(s) 141, 1479, 2318
AcsI RAATTY 7 cut(s) 17, 484, 544, 882, 1207, 1792, 1998
AcuI CTGAAG 8 cut(s) 309, 351, 750, 882, 2024, 2043, 2226, 2226
AfaI GTAC 2 cut(s) 461, 757
AflII CTTAAG 1 cut(s) 773
AjiI CACGTC 1 cut(s) 2224
AjnI CCWGG 7 cut(s) 446, 577, 1105, 1618, 1703, 2230, 2415
AjuI GAANNNNNNNTTGG 2 cut(s) 1722, 1754
AloI GAACNNNNNNTCC 2 cut(s) 1101, 1133
Alw21I GWGCWC 3 cut(s) 806, 1137, 1804
Alw26I GTCTC 4 cut(s) 314, 570, 1354, 1737
Alw44I GTGCAC 1 cut(s) 802
AlwI GGATC 3 cut(s) 141, 1479, 2318
AlwNI CAGNNNCTG 1 cut(s) 2039
ApaLI GTGCAC 1 cut(s) 802
ApoI RAATTY 7 cut(s) 17, 484, 544, 882, 1207, 1792, 1998
AspLEI GCGC 4 cut(s) 103, 257, 310, 497
AspS9I GGNCC 7 cut(s) 30, 554, 701, 1231, 1336, 1373, 1979
AsuHPI GGTGA 9 cut(s) 689, 1172, 1692, 1850, 1973, 2222, 2330, 2378, 2399
AvaII GGWCC 5 cut(s) 554, 701, 1231, 1336, 1373
AxyI CCTNAGG 1 cut(s) 1032
BaeGI GKGCMC 1 cut(s) 806
BanI GGYRCC 1 cut(s) 504
BanII GRGCYC 3 cut(s) 1137, 1583, 2175
BarI GAAGNNNNNNTAC 2 cut(s) 748, 780
BauI CACGAG 1 cut(s) 435
BbsI GAAGAC 5 cut(s) 1092, 1589, 1620, 1856, 2436
Bbv12I GWGCWC 3 cut(s) 806, 1137, 1804
BccI CCATC 5 cut(s) 512, 1496, 1508, 1883, 1930
BceAI ACGGC 1 cut(s) 2202
BciT130I CCWGG 7 cut(s) 448, 579, 1107, 1620, 1705, 2232, 2417
BcoDI GTCTC 4 cut(s) 314, 570, 1354, 1737
BfaI CTAG 1 cut(s) 1680
BfmI CTRYAG 2 cut(s) 2124, 2157
BfrI CTTAAG 1 cut(s) 773
BglII AGATCT 3 cut(s) 5, 1438, 1870
Bme1390I CCNGG 7 cut(s) 448, 579, 1107, 1620, 1705, 2232, 2417
Bme18I GGWCC 5 cut(s) 554, 701, 1231, 1336, 1373
BmgBI CACGTC 1 cut(s) 2224
BmgT120I GGNCC 7 cut(s) 30, 554, 701, 1231, 1336, 1373, 1979
BmiI GGNNCC 7 cut(s) 506, 762, 822, 1337, 1374, 1582, 2229
BmrFI CCNGG 7 cut(s) 448, 579, 1107, 1620, 1705, 2232, 2417
BmsI GCATC 1 cut(s) 2182
BpiI GAAGAC 5 cut(s) 1092, 1589, 1620, 1856, 2436
BpmI CTGGAG 1 cut(s) 1617
BpuEI CTTGAG 2 cut(s) 792, 1406
Bsa29I ATCGAT 1 cut(s) 196
BsaBI GATNNNNATC 1 cut(s) 1266
BsaWI WCCGGW 1 cut(s) 316
Bse118I RCCGGY 1 cut(s) 304
Bse1I ACTGG 2 cut(s) 467, 1634
Bse21I CCTNAGG 1 cut(s) 1032
Bse3DI GCAATG 1 cut(s) 671
Bse8I GATNNNNATC 1 cut(s) 1266
BseBI CCWGG 7 cut(s) 448, 579, 1107, 1620, 1705, 2232, 2417
BseCI ATCGAT 1 cut(s) 196
BseGI GGATG 8 cut(s) 259, 574, 955, 1081, 1834, 2295, 2365, 2443
BseJI GATNNNNATC 1 cut(s) 1266
BseMI GCAATG 1 cut(s) 671
BseMII CTCAG 8 cut(s) 40, 976, 1046, 1347, 1401, 1472, 1727, 2005
BseNI ACTGG 2 cut(s) 467, 1634
BseRI GAGGAG 5 cut(s) 350, 1405, 1541, 1794, 1801
BseSI GKGCMC 1 cut(s) 806
BseYI CCCAGC 1 cut(s) 535
BsgI GTGCAG 1 cut(s) 876
Bsh1236I CGCG 2 cut(s) 377, 497
Bsh1285I CGRYCG 1 cut(s) 1270
BshNI GGYRCC 1 cut(s) 504
BshVI ATCGAT 1 cut(s) 196
BsiEI CGRYCG 1 cut(s) 1270
BsiHKAI GWGCWC 3 cut(s) 806, 1137, 1804
BsiSI CCGG 3 cut(s) 220, 305, 317
BslFI GGGAC 2 cut(s) 623, 1349
BsmAI GTCTC 4 cut(s) 314, 570, 1354, 1737
BsmFI GGGAC 2 cut(s) 623, 1349
Bsp1286I GDGCHC 5 cut(s) 806, 1137, 1583, 1804, 2175
Bsp19I CCATGG 1 cut(s) 243
BspACI CCGC 7 cut(s) 114, 269, 733, 1531, 1623, 1763, 1955
BspCNI CTCAG 8 cut(s) 39, 975, 1045, 1348, 1402, 1473, 1726, 2004
BspDI ATCGAT 1 cut(s) 196
BspFNI CGCG 2 cut(s) 377, 497
BspHI TCATGA 1 cut(s) 1189
BspLI GGNNCC 7 cut(s) 506, 762, 822, 1337, 1374, 1582, 2229
BspMAI CTGCAG 1 cut(s) 2161
BspPI GGATC 3 cut(s) 141, 1479, 2318
BspQI GCTCTTC 2 cut(s) 124, 2163
BspT107I GGYRCC 1 cut(s) 504
BspTI CTTAAG 1 cut(s) 773
BsrBI CCGCTC 1 cut(s) 1531
BsrDI GCAATG 1 cut(s) 671
BsrFI RCCGGY 1 cut(s) 304
BsrI ACTGG 2 cut(s) 467, 1634
BssAI RCCGGY 1 cut(s) 304
BssSI CACGAG 1 cut(s) 435
BssT1I CCWWGG 4 cut(s) 243, 825, 1729, 1915
Bst2BI CACGAG 1 cut(s) 435
Bst2UI CCWGG 7 cut(s) 448, 579, 1107, 1620, 1705, 2232, 2417
Bst4CI ACNGT 9 cut(s) 425, 755, 1160, 1235, 1365, 1478, 1541, 2125, 2147
Bst6I CTCTTC 9 cut(s) 124, 327, 341, 1761, 2000, 2006, 2163, 2277, 2400
BstAFI CTTAAG 1 cut(s) 773
BstAPI GCANNNNNTGC 3 cut(s) 548, 608, 836
BstC8I GCNNGC 4 cut(s) 99, 600, 1316, 2181
BstDSI CCRYGG 3 cut(s) 243, 751, 1156
BstENI CCTNNNNNAGG 1 cut(s) 346
BstF5I GGATG 8 cut(s) 259, 574, 955, 1081, 1834, 2295, 2365, 2443
BstFNI CGCG 2 cut(s) 377, 497
BstHHI GCGC 4 cut(s) 103, 257, 310, 497
BstMAI GTCTC 4 cut(s) 314, 570, 1354, 1737
BstMCI CGRYCG 1 cut(s) 1270
BstNI CCWGG 7 cut(s) 448, 579, 1107, 1620, 1705, 2232, 2417
BstNSI RCATGY 2 cut(s) 393, 1318
BstSCI CCNGG 7 cut(s) 446, 577, 1105, 1618, 1703, 2230, 2415
BstSFI CTRYAG 2 cut(s) 2124, 2157
BstSLI GKGCMC 1 cut(s) 806
BstUI CGCG 2 cut(s) 377, 497
BstV2I GAAGAC 5 cut(s) 1092, 1589, 1620, 1856, 2436
BstX2I RGATCY 5 cut(s) 5, 1438, 1484, 1870, 2323
BstYI RGATCY 5 cut(s) 5, 1438, 1484, 1870, 2323
Bsu15I ATCGAT 1 cut(s) 196
Bsu36I CCTNAGG 1 cut(s) 1032
BsuTUI ATCGAT 1 cut(s) 196
BtgI CCRYGG 3 cut(s) 243, 751, 1156
BtrI CACGTC 1 cut(s) 2224
BtsCI GGATG 8 cut(s) 259, 574, 955, 1081, 1834, 2295, 2365, 2443
BtsIMutI CAGTG 2 cut(s) 430, 1999
Cac8I GCNNGC 4 cut(s) 99, 600, 1316, 2181
CaiI CAGNNNCTG 1 cut(s) 2039
CciI TCATGA 1 cut(s) 1189
CfoI GCGC 4 cut(s) 103, 257, 310, 497
Cfr10I RCCGGY 1 cut(s) 304
Cfr13I GGNCC 7 cut(s) 30, 554, 701, 1231, 1336, 1373, 1979
ClaI ATCGAT 1 cut(s) 196
CseI GACGC 3 cut(s) 352, 366, 1850
Csp6I GTAC 2 cut(s) 460, 756
CviQI GTAC 2 cut(s) 460, 756
DraI TTTAAA 1 cut(s) 672
Eam1104I CTCTTC 9 cut(s) 124, 327, 341, 1761, 2000, 2006, 2163, 2277, 2400
EarI CTCTTC 9 cut(s) 124, 327, 341, 1761, 2000, 2006, 2163, 2277, 2400
EciI GGCGGA 1 cut(s) 1778
Ecl136II GAGCTC 1 cut(s) 1135
Eco130I CCWWGG 4 cut(s) 243, 825, 1729, 1915
Eco147I AGGCCT 2 cut(s) 341, 1711
Eco24I GRGCYC 3 cut(s) 1137, 1583, 2175
Eco32I GATATC 1 cut(s) 1719
Eco47I GGWCC 5 cut(s) 554, 701, 1231, 1336, 1373
Eco53kI GAGCTC 1 cut(s) 1135
Eco57I CTGAAG 8 cut(s) 309, 351, 750, 882, 2024, 2043, 2226, 2226
Eco81I CCTNAGG 1 cut(s) 1032
EcoICRI GAGCTC 1 cut(s) 1135
EcoNI CCTNNNNNAGG 1 cut(s) 346
EcoO109I RGGNCCY 2 cut(s) 30, 1373
EcoRI GAATTC 1 cut(s) 1207
EcoRII CCWGG 7 cut(s) 446, 577, 1105, 1618, 1703, 2230, 2415
EcoRV GATATC 1 cut(s) 1719
EcoT14I CCWWGG 4 cut(s) 243, 825, 1729, 1915
EcoT38I GRGCYC 3 cut(s) 1137, 1583, 2175
ErhI CCWWGG 4 cut(s) 243, 825, 1729, 1915
FalI AAGNNNNNCTT 2 cut(s) 1722, 1754
FaqI GGGAC 2 cut(s) 623, 1349
FauI CCCGC 1 cut(s) 1616
FblI GTMKAC 1 cut(s) 366
FokI GGATG 8 cut(s) 246, 561, 962, 1088, 1841, 2302, 2372, 2450
FriOI GRGCYC 3 cut(s) 1137, 1583, 2175
FspBI CTAG 1 cut(s) 1680
FspI TGCGCA 1 cut(s) 102
GlaI GCGC 4 cut(s) 102, 256, 309, 496
GsaI CCCAGC 1 cut(s) 539
GsuI CTGGAG 1 cut(s) 1617
HapII CCGG 3 cut(s) 220, 305, 317
HgaI GACGC 3 cut(s) 352, 366, 1850
HhaI GCGC 4 cut(s) 103, 257, 310, 497
Hin6I GCGC 4 cut(s) 101, 255, 308, 495
HinP1I GCGC 4 cut(s) 101, 255, 308, 495
HincII GTYRAC 3 cut(s) 442, 936, 1672
HindII GTYRAC 3 cut(s) 442, 936, 1672
HindIII AAGCTT 2 cut(s) 95, 2177
HinfI GANTC 7 cut(s) 193, 203, 1097, 1142, 1414, 1553, 1684
HpaII CCGG 3 cut(s) 220, 305, 317
HphI GGTGA 9 cut(s) 689, 1172, 1692, 1850, 1973, 2222, 2330, 2378, 2399
Hpy166II GTNNAC 8 cut(s) 367, 442, 629, 804, 936, 1216, 1474, 1672
Hpy8I GTNNAC 8 cut(s) 367, 442, 629, 804, 936, 1216, 1474, 1672
Hpy99I CGWCG 1 cut(s) 382
HpyCH4III ACNGT 9 cut(s) 425, 755, 1160, 1235, 1365, 1478, 1541, 2125, 2147
HpyCH4IV ACGT 1 cut(s) 2223
HpySE526I ACGT 1 cut(s) 2223
HspAI GCGC 4 cut(s) 101, 255, 308, 495
LguI GCTCTTC 2 cut(s) 124, 2163
LmnI GCTCC 9 cut(s) 751, 760, 880, 1528, 1586, 1807, 1903, 2043, 2233
LweI GCATC 1 cut(s) 2182
MaeI CTAG 1 cut(s) 1680
MaeII ACGT 1 cut(s) 2223
MaeIII GTNAC 7 cut(s) 208, 583, 1283, 1646, 1698, 2128, 2366
MbiI CCGCTC 1 cut(s) 1531
MflI RGATCY 5 cut(s) 5, 1438, 1484, 1870, 2323
MhlI GDGCHC 5 cut(s) 806, 1137, 1583, 1804, 2175
MlyI GAGTC 3 cut(s) 1106, 1423, 1693
MmeI TCCRAC 4 cut(s) 829, 911, 2179, 2239
MseI TTAA 3 cut(s) 671, 774, 1752
MslI CAYNNNNRTG 3 cut(s) 108, 1253, 1503
MspA1I CMGCKG 3 cut(s) 329, 539, 743
MspCI CTTAAG 1 cut(s) 773
MspI CCGG 3 cut(s) 220, 305, 317
MspR9I CCNGG 7 cut(s) 448, 579, 1107, 1620, 1705, 2232, 2417
MvaI CCWGG 7 cut(s) 448, 579, 1107, 1620, 1705, 2232, 2417
MvnI CGCG 2 cut(s) 377, 497
NcoI CCATGG 1 cut(s) 243
NlaIV GGNNCC 7 cut(s) 506, 762, 822, 1337, 1374, 1582, 2229
NmeAIII GCCGAG 2 cut(s) 2293, 2299
NmuCI GTSAC 4 cut(s) 1283, 1646, 1698, 2366
NsbI TGCGCA 1 cut(s) 102
NspI RCATGY 2 cut(s) 393, 1318
PaeI GCATGC 1 cut(s) 1318
PagI TCATGA 1 cut(s) 1189
PasI CCCWGGG 1 cut(s) 447
PceI AGGCCT 2 cut(s) 341, 1711
PciSI GCTCTTC 2 cut(s) 124, 2163
PcsI WCGNNNNNNNCGW 1 cut(s) 1858
PfeI GAWTC 4 cut(s) 193, 203, 1142, 1553
PflMI CCANNNNNTGG 1 cut(s) 1640
Ple19I CGATCG 1 cut(s) 1270
PleI GAGTC 3 cut(s) 1105, 1422, 1692
PpsI GAGTC 3 cut(s) 1105, 1422, 1692
PpuMI RGGWCCY 1 cut(s) 1373
PsiI TTATAA 1 cut(s) 618
Psp124BI GAGCTC 1 cut(s) 1137
Psp5II RGGWCCY 1 cut(s) 1373
Psp6I CCWGG 7 cut(s) 446, 577, 1105, 1618, 1703, 2230, 2415
PspFI CCCAGC 1 cut(s) 535
PspGI CCWGG 7 cut(s) 446, 577, 1105, 1618, 1703, 2230, 2415
PspN4I GGNNCC 7 cut(s) 506, 762, 822, 1337, 1374, 1582, 2229
PspPI GGNCC 7 cut(s) 30, 554, 701, 1231, 1336, 1373, 1979
PspPPI RGGWCCY 1 cut(s) 1373
PstI CTGCAG 1 cut(s) 2161
PstNI CAGNNNCTG 1 cut(s) 2039
PsuI RGATCY 5 cut(s) 5, 1438, 1484, 1870, 2323
PvuI CGATCG 1 cut(s) 1270
PvuII CAGCTG 3 cut(s) 329, 539, 743
RsaI GTAC 2 cut(s) 461, 757
RsaNI GTAC 2 cut(s) 460, 756
RseI CAYNNNNRTG 3 cut(s) 108, 1253, 1503
SacI GAGCTC 1 cut(s) 1137
SapI GCTCTTC 2 cut(s) 124, 2163
SaqAI TTAA 3 cut(s) 671, 774, 1752
Sau96I GGNCC 7 cut(s) 30, 554, 701, 1231, 1336, 1373, 1979
SchI GAGTC 3 cut(s) 1106, 1423, 1693
ScrFI CCNGG 7 cut(s) 448, 579, 1107, 1620, 1705, 2232, 2417
SduI GDGCHC 5 cut(s) 806, 1137, 1583, 1804, 2175
SfaNI GCATC 1 cut(s) 2182
SfcI CTRYAG 2 cut(s) 2124, 2157
SinI GGWCC 5 cut(s) 554, 701, 1231, 1336, 1373
SmiMI CAYNNNNRTG 3 cut(s) 108, 1253, 1503
SmlI CTYRAG 3 cut(s) 773, 807, 1385
SmoI CTYRAG 3 cut(s) 773, 807, 1385
SphI GCATGC 1 cut(s) 1318
SseBI AGGCCT 2 cut(s) 341, 1711
SsiI CCGC 7 cut(s) 114, 269, 733, 1531, 1623, 1763, 1955
SspMI CTAG 1 cut(s) 1680
SstI GAGCTC 1 cut(s) 1137
StuI AGGCCT 2 cut(s) 341, 1711
StyD4I CCNGG 7 cut(s) 446, 577, 1105, 1618, 1703, 2230, 2415
StyI CCWWGG 4 cut(s) 243, 825, 1729, 1915
TaaI ACNGT 9 cut(s) 425, 755, 1160, 1235, 1365, 1478, 1541, 2125, 2147
TaiI ACGT 1 cut(s) 2226
TaqI TCGA 5 cut(s) 196, 1266, 1270, 1741, 2313
TaqII GACCGA 1 cut(s) 1848
TauI GCSGC 2 cut(s) 117, 271
TfiI GAWTC 4 cut(s) 193, 203, 1142, 1553
Tru1I TTAA 3 cut(s) 671, 774, 1752
Tru9I TTAA 3 cut(s) 671, 774, 1752
TscAI CASTG 2 cut(s) 430, 1999
TseFI GTSAC 4 cut(s) 1283, 1646, 1698, 2366
Tsp45I GTSAC 4 cut(s) 1283, 1646, 1698, 2366
TspGWI ACGGA 6 cut(s) 28, 196, 371, 714, 773, 1939
TspRI CASTG 2 cut(s) 430, 1999
Van91I CCANNNNNTGG 1 cut(s) 1640
Vha464I CTTAAG 1 cut(s) 773
VneI GTGCAC 1 cut(s) 802
VpaK11BI GGWCC 5 cut(s) 554, 701, 1231, 1336, 1373
XagI CCTNNNNNAGG 1 cut(s) 346
XapI RAATTY 7 cut(s) 17, 484, 544, 882, 1207, 1792, 1998
XceI RCATGY 2 cut(s) 393, 1318
XmiI GTMKAC 1 cut(s) 366
XspI CTAG 1 cut(s) 1680
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.