zinc finger CCCH domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G02160 |
| fragaria_vesca | FvH4_5g18690 FvH4_5g18690 |
| malus_domestica | MD16G1008200.v1.1 |
| prunus_persica | Prupe.1G342700_v2.0.a1 |
| pyrus_communis | pycom13g00840 pycom16g00800 pycom16g00810 |
| rosa_chinensis | RchiOBHm_Chr7g0176801 |
| rosa_laevigata | RLG00000005584 |
| rosa_multiflora | Rmu_sc0005162.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00276400 |
| rosa_rugosa | Rorug06G0401100 |
| rosa_samantha | Rh7AG000100 Rh7BG000300 Rh7CG000100 Rh7DG000400 |
| rosa_wichuraiana | Rw7G000010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 4 cut(s) | 131, 299, 332, 368 |
| AcsI | RAATTY | 1 cut(s) | 174 |
| AcuI | CTGAAG | 5 cut(s) | 200, 219, 399, 399, 468 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 298 |
| AgsI | TTSAA | 1 cut(s) | 152 |
| AjiI | CACGTC | 1 cut(s) | 397 |
| AjnI | CCWGG | 1 cut(s) | 528 |
| AluBI | AGCT | 3 cut(s) | 49, 197, 209 |
| AluI | AGCT | 3 cut(s) | 49, 197, 209 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 212 |
| AoxI | GGCC | 1 cut(s) | 155 |
| ApeKI | GCWGC | 2 cut(s) | 203, 206 |
| ApoI | RAATTY | 1 cut(s) | 174 |
| AspS9I | GGNCC | 1 cut(s) | 155 |
| AsuHPI | GGTGA | 6 cut(s) | 26, 149, 322, 494, 512, 560 |
| BanII | GRGCYC | 1 cut(s) | 348 |
| BbsI | GAAGAC | 3 cut(s) | 32, 405, 549 |
| BbvI | GCAGC | 2 cut(s) | 215, 218 |
| BccI | CCATC | 1 cut(s) | 106 |
| BceAI | ACGGC | 1 cut(s) | 375 |
| BciT130I | CCWGG | 1 cut(s) | 530 |
| BisI | GCNGC | 3 cut(s) | 204, 207, 333 |
| BlsI | GCNGC | 3 cut(s) | 205, 208, 334 |
| Bme1390I | CCNGG | 1 cut(s) | 530 |
| BmgBI | CACGTC | 1 cut(s) | 397 |
| BmgT120I | GGNCC | 1 cut(s) | 155 |
| BmrFI | CCNGG | 1 cut(s) | 530 |
| BmsI | GCATC | 2 cut(s) | 55, 355 |
| BpiI | GAAGAC | 3 cut(s) | 32, 405, 549 |
| BpmI | CTGGAG | 1 cut(s) | 453 |
| BsaBI | GATNNNNATC | 1 cut(s) | 120 |
| BsaJI | CCNNGG | 1 cut(s) | 91 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 298 |
| Bse8I | GATNNNNATC | 1 cut(s) | 120 |
| BseBI | CCWGG | 1 cut(s) | 530 |
| BseDI | CCNNGG | 1 cut(s) | 91 |
| BseGI | GGATG | 1 cut(s) | 10 |
| BseJI | GATNNNNATC | 1 cut(s) | 120 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 298 |
| BseMII | CTCAG | 1 cut(s) | 181 |
| BseRI | GAGGAG | 1 cut(s) | 467 |
| BseXI | GCAGC | 2 cut(s) | 215, 218 |
| BshFI | GGCC | 1 cut(s) | 157 |
| BslFI | GGGAC | 1 cut(s) | 488 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 298 |
| BsmFI | GGGAC | 1 cut(s) | 488 |
| BsnI | GGCC | 1 cut(s) | 157 |
| Bsp1286I | GDGCHC | 1 cut(s) | 348 |
| Bsp143I | GATC | 3 cut(s) | 7, 139, 277 |
| BspACI | CCGC | 4 cut(s) | 131, 299, 332, 368 |
| BspANI | GGCC | 1 cut(s) | 157 |
| BspCNI | CTCAG | 1 cut(s) | 180 |
| BspQI | GCTCTTC | 1 cut(s) | 336 |
| BssECI | CCNNGG | 1 cut(s) | 91 |
| BssMI | GATC | 3 cut(s) | 7, 139, 277 |
| BssT1I | CCWWGG | 1 cut(s) | 91 |
| Bst2UI | CCWGG | 1 cut(s) | 530 |
| Bst4CI | ACNGT | 2 cut(s) | 320, 548 |
| Bst6I | CTCTTC | 5 cut(s) | 176, 182, 336, 444, 513 |
| BstDEI | CTNAG | 2 cut(s) | 167, 561 |
| BstF5I | GGATG | 1 cut(s) | 10 |
| BstKTI | GATC | 3 cut(s) | 10, 142, 280 |
| BstMBI | GATC | 3 cut(s) | 7, 139, 277 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 203, 273, 282 |
| BstNI | CCWGG | 1 cut(s) | 530 |
| BstSCI | CCNGG | 1 cut(s) | 528 |
| BstV1I | GCAGC | 2 cut(s) | 215, 218 |
| BstV2I | GAAGAC | 3 cut(s) | 32, 405, 549 |
| BsuRI | GGCC | 1 cut(s) | 157 |
| BtrI | CACGTC | 1 cut(s) | 397 |
| BtsCI | GGATG | 1 cut(s) | 10 |
| BtsI | GCAGTG | 1 cut(s) | 327 |
| BtsIMutI | CAGTG | 2 cut(s) | 175, 327 |
| CaiI | CAGNNNCTG | 1 cut(s) | 212 |
| Cfr13I | GGNCC | 1 cut(s) | 155 |
| CseI | GACGC | 1 cut(s) | 26 |
| CviAII | CATG | 2 cut(s) | 404, 425 |
| CviJI | RGCY | 9 cut(s) | 49, 157, 163, 197, 209, 346, 362, 431, 446 |
| CviKI_1 | RGCY | 9 cut(s) | 49, 157, 163, 197, 209, 346, 362, 431, 446 |
| DdeI | CTNAG | 2 cut(s) | 167, 561 |
| DpnI | GATC | 3 cut(s) | 9, 141, 279 |
| DpnII | GATC | 3 cut(s) | 7, 139, 277 |
| Eam1104I | CTCTTC | 5 cut(s) | 176, 182, 336, 444, 513 |
| EarI | CTCTTC | 5 cut(s) | 176, 182, 336, 444, 513 |
| Eco130I | CCWWGG | 1 cut(s) | 91 |
| Eco24I | GRGCYC | 1 cut(s) | 348 |
| Eco57I | CTGAAG | 5 cut(s) | 200, 219, 399, 399, 468 |
| EcoRII | CCWGG | 1 cut(s) | 528 |
| EcoT14I | CCWWGG | 1 cut(s) | 91 |
| EcoT38I | GRGCYC | 1 cut(s) | 348 |
| ErhI | CCWWGG | 1 cut(s) | 91 |
| FaeI | CATG | 2 cut(s) | 407, 428 |
| FaiI | YATR | 5 cut(s) | 405, 426, 459, 489, 495 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 126, 158 |
| FaqI | GGGAC | 1 cut(s) | 488 |
| FatI | CATG | 2 cut(s) | 403, 424 |
| Fnu4HI | GCNGC | 3 cut(s) | 204, 207, 333 |
| FokI | GGATG | 1 cut(s) | 17 |
| FriOI | GRGCYC | 1 cut(s) | 348 |
| Fsp4HI | GCNGC | 3 cut(s) | 204, 207, 333 |
| GluI | GCNGC | 3 cut(s) | 204, 207, 333 |
| GsuI | CTGGAG | 1 cut(s) | 453 |
| HaeIII | GGCC | 1 cut(s) | 157 |
| HgaI | GACGC | 1 cut(s) | 26 |
| Hin1II | CATG | 2 cut(s) | 407, 428 |
| HinfI | GANTC | 1 cut(s) | 287 |
| HphI | GGTGA | 6 cut(s) | 26, 149, 322, 494, 512, 560 |
| Hpy188I | TCNGA | 3 cut(s) | 180, 258, 418 |
| Hpy188III | TCNNGA | 3 cut(s) | 44, 213, 585 |
| HpyAV | CCTTC | 5 cut(s) | 128, 146, 331, 413, 491 |
| HpyCH4III | ACNGT | 2 cut(s) | 320, 548 |
| HpyCH4IV | ACGT | 1 cut(s) | 396 |
| HpyCH4V | TGCA | 3 cut(s) | 68, 356, 509 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 203, 273, 282 |
| HpyF3I | CTNAG | 2 cut(s) | 167, 561 |
| HpySE526I | ACGT | 1 cut(s) | 396 |
| Hsp92II | CATG | 2 cut(s) | 407, 428 |
| Kzo9I | GATC | 3 cut(s) | 7, 139, 277 |
| LguI | GCTCTTC | 1 cut(s) | 336 |
| LmnI | GCTCC | 1 cut(s) | 79 |
| LpnPI | CCDG | 9 cut(s) | 57, 198, 205, 253, 305, 417, 455, 515, 542 |
| Lsp1109I | GCAGC | 2 cut(s) | 215, 218 |
| LweI | GCATC | 2 cut(s) | 55, 355 |
| MaeII | ACGT | 1 cut(s) | 396 |
| MaeIII | GTNAC | 2 cut(s) | 301, 482 |
| MalI | GATC | 3 cut(s) | 9, 141, 279 |
| MboI | GATC | 3 cut(s) | 7, 139, 277 |
| MhlI | GDGCHC | 1 cut(s) | 348 |
| MluCI | AATT | 4 cut(s) | 118, 174, 390, 490 |
| MlyI | GAGTC | 1 cut(s) | 281 |
| MmeI | TCCRAC | 1 cut(s) | 352 |
| MspR9I | CCNGG | 1 cut(s) | 530 |
| MvaI | CCWGG | 1 cut(s) | 530 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 203, 273, 282 |
| NdeII | GATC | 3 cut(s) | 7, 139, 277 |
| NlaIII | CATG | 2 cut(s) | 407, 428 |
| NmuCI | GTSAC | 1 cut(s) | 482 |
| PciSI | GCTCTTC | 1 cut(s) | 336 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 34 |
| PkrI | GCNGC | 3 cut(s) | 205, 208, 334 |
| PleI | GAGTC | 1 cut(s) | 281 |
| PpsI | GAGTC | 1 cut(s) | 281 |
| Psp6I | CCWGG | 1 cut(s) | 528 |
| PspGI | CCWGG | 1 cut(s) | 528 |
| PspPI | GGNCC | 1 cut(s) | 155 |
| PstNI | CAGNNNCTG | 1 cut(s) | 212 |
| SapI | GCTCTTC | 1 cut(s) | 336 |
| SatI | GCNGC | 3 cut(s) | 204, 207, 333 |
| Sau3AI | GATC | 3 cut(s) | 7, 139, 277 |
| Sau96I | GGNCC | 1 cut(s) | 155 |
| SchI | GAGTC | 1 cut(s) | 281 |
| ScrFI | CCNGG | 1 cut(s) | 530 |
| SduI | GDGCHC | 1 cut(s) | 348 |
| SfaNI | GCATC | 2 cut(s) | 55, 355 |
| Sse9I | AATT | 4 cut(s) | 118, 174, 390, 490 |
| SsiI | CCGC | 4 cut(s) | 131, 299, 332, 368 |
| StyD4I | CCNGG | 1 cut(s) | 528 |
| StyI | CCWWGG | 1 cut(s) | 91 |
| TaaI | ACNGT | 2 cut(s) | 320, 548 |
| TaiI | ACGT | 1 cut(s) | 399 |
| TaqI | TCGA | 2 cut(s) | 10, 441 |
| TasI | AATT | 4 cut(s) | 118, 174, 390, 490 |
| TauI | GCSGC | 1 cut(s) | 335 |
| TscAI | CASTG | 2 cut(s) | 175, 334 |
| TseFI | GTSAC | 1 cut(s) | 482 |
| TseI | GCWGC | 2 cut(s) | 203, 206 |
| Tsp45I | GTSAC | 1 cut(s) | 482 |
| TspDTI | ATGAA | 4 cut(s) | 135, 392, 510, 555 |
| TspGWI | ACGGA | 1 cut(s) | 115 |
| TspRI | CASTG | 2 cut(s) | 175, 334 |
| XapI | RAATTY | 1 cut(s) | 174 |