Rmu_sc0005162.1_g000002

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005162.1
OG0013265
Physical Location & Seq
Reverse (-)
1601 .. 4717
3117 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005162.1_g000002.1.cds

Sequence Viewer

Length: 2238 bp
atggtagtcggcgcacaaccaaagccgcaaccgcaatcacaacctcaacagctgcagcagcagcaaccccaacctgaggcttctgctgaagaggaggccttgaagaggaacaccgattgtgtctacttcctcgcctcgcccgtctcctgcaaaaagggaagtgaatgtgaatatcgccacagtgaacatgctttgtacaatcctagggattgctggttctggttgaatgggaattgcttaaatttaaaatgctcgtttcggcatccacctcttgatggtttgttagggagcccagctgcaagttcagctggaccttctttgcctttatcacatactgcgacaacacctgcaaccaatgctactttcaactcaagtaaacaagcagtcccctgtatcttctttcaaaggggattttgctcaaaagctgataaatgccccttctcacatggaccaaatcctattactagtagtaaagttccacaggccccagcagctacccatggtacagaaccttcaagtcttaagaagatttttggtggcattcagaagtgcactcaagagatgaagattcctcaggtaagtgcctcaaagattgttggagtgcctcctcaatccaaacctgctccaaaggttgaaactgcaccaccacgaaatggagttggcattgagaggaatgtactagtaactagagactttgacgatgaggctcttagatacaaggcaagaagtgtgttgcctgctatgaatggagactctacaggccaggccaatcattttcttcaggctcatgtatcagaaaatcatggtttccaaaatggcaaggatgttgatgagcatttgagggagtcttctcctggatttgatgttcttgtagatgatgaacttggagattctgattactaccatggtgaagaacaatttggaataaaaagaggtcatgatggaaggaacttgaattctgtgaatgagtatgatttggactgtcctactgattacaattcaattgctgatggtgatcgagaaaggtttcgtgacccacgaggttatggcccttatgatcagatgcaagggagatatgcttgggaccagcacagggcttcatctgagagacttctagtgggctctgctcattcggagaggaggggttatcgtaaatctgatagtccagatcacattgatgggtcagatctgcgacatcgtttgtccaaacataggaggggaaatggtctgagatccatcatcagcaatgactacgatggccatgttgaggagcgaaaaagccgtcctcgtagggattcacagcaattgccctcacatgagggctccctcagcagtcgtcttcgtggtagaataaagcttccaggtggatcttctccagtcaatagtagtgacttgcgccaagagagggaagctgacagaggaaggagtcgtgacagaagtcgcgatagattgtcacccagaaggcctcaaattatgtcccaccaaggaaggcttcgagacagaatacaaggaagggtccaagaggactataataatgaggttagaaatttcggggttcctcgtatgaggagagagatagtggatgaaagaagcacagagttttctcatccaaaacgtctctcagatctgaaaggtggggtagatgcagaaattagggagcattcttaccttggaaaaccaaataatgtgaagatggataataatcagctatctgaaggtgatctctcatttgaagggccaaagcctcttagcgagattctgaagaggaagagagaagctgaagcagctgcagcttctgggagcaggaaaagatcttctgttaataaacaacgcaacaatgagaaagaaggcccggtgagaaatccaggtggctccgagacaggagctattacaatgatgcataacagccagtcccctgtggccaaagaagagacaaagtctgcaaccactgatgcagttggagctgaaaatgaaaaaattgatgtggcccctggccagtcttccgaaggacataatgatggcgagctagagactgaagatggtctgatatatgatgaaacacttgaggaccacgagcttgacggtgaagatcagagggaaggggaatatgattatgagcaaggagaggatggtgaatatacttacgaagaaggtgaaaatgcagatgctgaagaggaatacctggaggaggaagacggggatgactttgctaagaagattggtgtcatgttctcttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CCCH_2 zf-CCCH_3

Protein Analysis

745

Amino Acids

83.09

Weight (kDa)

5.63

Isoelectric Point (pI)

58.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013265)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G02160
fragaria_vesca FvH4_5g18690 FvH4_5g18690
malus_domestica MD16G1008200.v1.1
prunus_persica Prupe.1G342700_v2.0.a1
pyrus_communis pycom13g00840 pycom16g00800 pycom16g00810
rosa_chinensis RchiOBHm_Chr7g0176801
rosa_laevigata RLG00000005584
rosa_multiflora Rmu_sc0005162.1_g000002
rosa_roxburghii Rroxscaffold_3G00276400
rosa_rugosa Rorug06G0401100
rosa_samantha Rh7AG000100 Rh7BG000300 Rh7CG000100 Rh7DG000400
rosa_wichuraiana Rw7G000010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 355
Acc36I ACCTGC 2 cut(s) 355, 628
AccB7I CCANNNNNTGG 1 cut(s) 653
AccI GTMKAC 1 cut(s) 123
AccII CGCG 1 cut(s) 1443
AciI CCGC 2 cut(s) 26, 32
AclWI GGATC 2 cut(s) 1227, 1375
AcoI YGGCCR 3 cut(s) 1258, 1920, 1993
AcsI RAATTY 3 cut(s) 241, 955, 1546
AcuI CTGAAG 7 cut(s) 108, 764, 1734, 1781, 1800, 2055, 2190
AfaI GTAC 3 cut(s) 197, 505, 678
AfiI CCNNNNNNNGG 9 cut(s) 76, 105, 275, 653, 1093, 1212, 1267, 1405, 2188
AflII CTTAAG 1 cut(s) 521
AgsI TTSAA 9 cut(s) 103, 226, 367, 404, 516, 635, 955, 1002, 1733
AhlI ACTAGT 2 cut(s) 464, 679
AjnI CCWGG 6 cut(s) 762, 853, 1360, 1864, 1990, 2181
AjuI GAANNNNNNNTTGG 6 cut(s) 347, 379, 903, 935, 1476, 1508
AloI GAACNNNNNNTCC 4 cut(s) 200, 232, 849, 881
Alw21I GWGCWC 1 cut(s) 554
Alw26I GTCTC 9 cut(s) 148, 684, 744, 1102, 1491, 1622, 1871, 1925, 2024
Alw44I GTGCAC 1 cut(s) 550
AlwI GGATC 2 cut(s) 1227, 1375
AlwNI CAGNNNCTG 2 cut(s) 1796, 2168
ApaLI GTGCAC 1 cut(s) 550
ApeKI GCWGC 9 cut(s) 52, 55, 58, 61, 296, 491, 1784, 1787, 1790
ApoI RAATTY 3 cut(s) 241, 955, 1546
ArsI GACNNNNNNTTYG 2 cut(s) 1267, 1299
Asp700I GAANNNNTTC 1 cut(s) 1026
AspA2I CCTAGG 1 cut(s) 203
AspLEI GCGC 2 cut(s) 14, 1398
AsuC2I CCSGG 1 cut(s) 1853
AsuHPI GGTGA 8 cut(s) 920, 1025, 1446, 1730, 1867, 2096, 2144, 2165
AvaII GGWCC 5 cut(s) 311, 449, 1084, 1516, 2068
AvrII CCTAGG 1 cut(s) 203
AxyI CCTNAGG 2 cut(s) 75, 573
BaeGI GKGCMC 1 cut(s) 554
BalI TGGCCA 3 cut(s) 1260, 1922, 1995
BanII GRGCYC 3 cut(s) 293, 1124, 1325
BarI GAAGNNNNNNTAC 2 cut(s) 496, 528
BauI CACGAG 2 cut(s) 1038, 2072
BbsI GAAGAC 4 cut(s) 840, 1331, 1992, 2199
Bbv12I GWGCWC 1 cut(s) 554
BbvCI CCTCAGC 1 cut(s) 1328
BbvI GCAGC 9 cut(s) 39, 67, 70, 73, 283, 503, 1774, 1796, 1802
BceAI ACGGC 1 cut(s) 1266
BciT130I CCWGG 6 cut(s) 764, 855, 1362, 1866, 1992, 2183
BclI TGATCA 1 cut(s) 1057
BcnI CCSGG 1 cut(s) 1853
BcoDI GTCTC 9 cut(s) 148, 684, 744, 1102, 1491, 1622, 1871, 1925, 2024
BcuI ACTAGT 2 cut(s) 464, 679
BfaI CTAG 6 cut(s) 204, 465, 680, 687, 1115, 2027
BfmI CTRYAG 3 cut(s) 53, 756, 1788
BfrI CTTAAG 1 cut(s) 521
BfuAI ACCTGC 2 cut(s) 355, 628
BglII AGATCT 3 cut(s) 1186, 1624, 1811
BlnI CCTAGG 1 cut(s) 203
Bme1390I CCNGG 7 cut(s) 764, 855, 1362, 1853, 1866, 1992, 2183
Bme18I GGWCC 5 cut(s) 311, 449, 1084, 1516, 2068
BmiI GGNNCC 8 cut(s) 290, 486, 1085, 1324, 1517, 1557, 1873, 1989
BmrFI CCNGG 7 cut(s) 764, 855, 1362, 1853, 1866, 1992, 2183
BmsI GCATC 6 cut(s) 271, 1053, 1633, 1887, 1942, 2155
BoxI GACNNNNGTC 1 cut(s) 1437
BpiI GAAGAC 4 cut(s) 840, 1331, 1992, 2199
BpmI CTGGAG 2 cut(s) 1359, 2204
Bpu10I CCTNAGC 1 cut(s) 1328
BpuEI CTTGAG 3 cut(s) 355, 540, 2084
BpuMI CCSGG 1 cut(s) 1853
BsaBI GATNNNNATC 2 cut(s) 1014, 1701
BsaJI CCNNGG 6 cut(s) 203, 499, 904, 1483, 1669, 1990
Bsc4I CCNNNNNNNGG 9 cut(s) 76, 105, 275, 653, 1093, 1212, 1267, 1405, 2188
Bse1I ACTGG 3 cut(s) 1376, 1909, 1996
Bse21I CCTNAGG 2 cut(s) 75, 573
Bse3DI GCAATG 1 cut(s) 1252
Bse8I GATNNNNATC 2 cut(s) 1014, 1701
BseBI CCWGG 6 cut(s) 764, 855, 1362, 1866, 1992, 2183
BseDI CCNNGG 6 cut(s) 203, 499, 904, 1483, 1669, 1990
BseGI GGATG 6 cut(s) 262, 829, 1588, 1606, 2134, 2206
BseJI GATNNNNATC 2 cut(s) 1014, 1701
BseLI CCNNNNNNNGG 9 cut(s) 76, 105, 275, 653, 1093, 1212, 1267, 1405, 2188
BseMI GCAATG 1 cut(s) 1252
BseMII CTCAG 6 cut(s) 66, 587, 1095, 1220, 1342, 1635
BseNI ACTGG 3 cut(s) 1376, 1909, 1996
BseRI GAGGAG 6 cut(s) 107, 597, 1153, 1283, 1582, 2201
BseSI GKGCMC 1 cut(s) 554
BseXI GCAGC 9 cut(s) 39, 67, 70, 73, 283, 503, 1774, 1796, 1802
BseYI CCCAGC 2 cut(s) 292, 487
BsgI GTGCAG 1 cut(s) 624
Bsh1236I CGCG 1 cut(s) 1443
BsiHKAI GWGCWC 1 cut(s) 554
BsiSI CCGG 1 cut(s) 1853
BslFI GGGAC 4 cut(s) 371, 1097, 1462, 1897
BslI CCNNNNNNNGG 9 cut(s) 76, 105, 275, 653, 1093, 1212, 1267, 1405, 2188
BsmAI GTCTC 9 cut(s) 148, 684, 744, 1102, 1491, 1622, 1871, 1925, 2024
BsmBI CGTCTC 2 cut(s) 148, 1622
BsmFI GGGAC 4 cut(s) 371, 1097, 1462, 1897
BsmI GAATGC 2 cut(s) 540, 1660
Bsp1286I GDGCHC 4 cut(s) 293, 554, 1124, 1325
Bsp1407I TGTACA 1 cut(s) 195
Bsp19I CCATGG 2 cut(s) 499, 904
Bsp68I TCGCGA 1 cut(s) 1443
BspACI CCGC 2 cut(s) 26, 32
BspCNI CTCAG 6 cut(s) 67, 586, 1096, 1221, 1341, 1634
BspFNI CGCG 1 cut(s) 1443
BspHI TCATGA 1 cut(s) 937
BspLI GGNNCC 8 cut(s) 290, 486, 1085, 1324, 1517, 1557, 1873, 1989
BspMAI CTGCAG 2 cut(s) 57, 1792
BspMI ACCTGC 2 cut(s) 355, 628
BspPI GGATC 2 cut(s) 1227, 1375
BspTI CTTAAG 1 cut(s) 521
BsrDI GCAATG 1 cut(s) 1252
BsrGI TGTACA 1 cut(s) 195
BsrI ACTGG 3 cut(s) 1376, 1909, 1996
BssECI CCNNGG 6 cut(s) 203, 499, 904, 1483, 1669, 1990
BssSI CACGAG 2 cut(s) 1038, 2072
BssT1I CCWWGG 5 cut(s) 203, 499, 904, 1483, 1669
Bst2BI CACGAG 2 cut(s) 1038, 2072
Bst2UI CCWGG 6 cut(s) 764, 855, 1362, 1866, 1992, 2183
Bst4CI ACNGT 3 cut(s) 182, 983, 2084
Bst6I CTCTTC 6 cut(s) 84, 98, 1757, 1763, 1923, 2166
BstAFI CTTAAG 1 cut(s) 521
BstAPI GCANNNNNTGC 1 cut(s) 356
BstAUI TGTACA 1 cut(s) 195
BstC8I GCNNGC 2 cut(s) 738, 2024
BstDEI CTNAG 9 cut(s) 75, 573, 710, 1104, 1229, 1328, 1621, 1748, 2211
BstDSI CCRYGG 2 cut(s) 499, 904
BstENI CCTNNNNNAGG 2 cut(s) 103, 2186
BstF5I GGATG 6 cut(s) 262, 829, 1588, 1606, 2134, 2206
BstFNI CGCG 1 cut(s) 1443
BstHHI GCGC 2 cut(s) 14, 1398
BstMAI GTCTC 9 cut(s) 148, 684, 744, 1102, 1491, 1622, 1871, 1925, 2024
BstNI CCWGG 6 cut(s) 764, 855, 1362, 1866, 1992, 2183
BstNSI RCATGY 1 cut(s) 191
BstPAI GACNNNNGTC 1 cut(s) 1437
BstSCI CCNGG 7 cut(s) 762, 853, 1360, 1851, 1864, 1990, 2181
BstSFI CTRYAG 3 cut(s) 53, 756, 1788
BstSLI GKGCMC 1 cut(s) 554
BstUI CGCG 1 cut(s) 1443
BstV1I GCAGC 9 cut(s) 39, 67, 70, 73, 283, 503, 1774, 1796, 1802
BstV2I GAAGAC 4 cut(s) 840, 1331, 1992, 2199
BstX2I RGATCY 5 cut(s) 1186, 1232, 1367, 1624, 1811
BstYI RGATCY 5 cut(s) 1186, 1232, 1367, 1624, 1811
Bsu36I CCTNAGG 2 cut(s) 75, 573
BtgI CCRYGG 2 cut(s) 499, 904
BtsCI GGATG 6 cut(s) 262, 829, 1588, 1606, 2134, 2206
BtsIMutI CAGTG 2 cut(s) 187, 1947
BtuMI TCGCGA 1 cut(s) 1443
BveI ACCTGC 2 cut(s) 355, 628
Cac8I GCNNGC 2 cut(s) 738, 2024
CaiI CAGNNNCTG 2 cut(s) 1796, 2168
CciI TCATGA 1 cut(s) 937
CfoI GCGC 2 cut(s) 14, 1398
Csp6I GTAC 3 cut(s) 196, 504, 677
CviQI GTAC 3 cut(s) 196, 504, 677
DdeI CTNAG 9 cut(s) 75, 573, 710, 1104, 1229, 1328, 1621, 1748, 2211
DraI TTTAAA 1 cut(s) 246
EaeI YGGCCR 3 cut(s) 1258, 1920, 1993
Eam1104I CTCTTC 6 cut(s) 84, 98, 1757, 1763, 1923, 2166
EarI CTCTTC 6 cut(s) 84, 98, 1757, 1763, 1923, 2166
Eco130I CCWWGG 5 cut(s) 203, 499, 904, 1483, 1669
Eco147I AGGCCT 2 cut(s) 98, 1465
Eco24I GRGCYC 3 cut(s) 293, 1124, 1325
Eco47I GGWCC 5 cut(s) 311, 449, 1084, 1516, 2068
Eco57I CTGAAG 7 cut(s) 108, 764, 1734, 1781, 1800, 2055, 2190
Eco81I CCTNAGG 2 cut(s) 75, 573
EcoNI CCTNNNNNAGG 2 cut(s) 103, 2186
EcoO109I RGGNCCY 1 cut(s) 484
EcoRI GAATTC 1 cut(s) 955
EcoRII CCWGG 6 cut(s) 762, 853, 1360, 1864, 1990, 2181
EcoT14I CCWWGG 5 cut(s) 203, 499, 904, 1483, 1669
EcoT22I ATGCAT 1 cut(s) 1902
EcoT38I GRGCYC 3 cut(s) 293, 1124, 1325
ErhI CCWWGG 5 cut(s) 203, 499, 904, 1483, 1669
Esp3I CGTCTC 2 cut(s) 148, 1622
FalI AAGNNNNNCTT 2 cut(s) 1476, 1508
FaqI GGGAC 4 cut(s) 371, 1097, 1462, 1897
FbaI TGATCA 1 cut(s) 1057
FblI GTMKAC 1 cut(s) 123
FokI GGATG 6 cut(s) 249, 836, 1593, 1595, 2141, 2213
FriOI GRGCYC 3 cut(s) 293, 1124, 1325
FspBI CTAG 6 cut(s) 204, 465, 680, 687, 1115, 2027
GlaI GCGC 2 cut(s) 13, 1397
GsaI CCCAGC 2 cut(s) 296, 491
GsuI CTGGAG 2 cut(s) 1359, 2204
HapII CCGG 1 cut(s) 1853
HhaI GCGC 2 cut(s) 14, 1398
Hin6I GCGC 2 cut(s) 12, 1396
HinP1I GCGC 2 cut(s) 12, 1396
HindIII AAGCTT 1 cut(s) 1355
HinfI GANTC 7 cut(s) 568, 752, 845, 890, 1295, 1426, 1756
HpaII CCGG 1 cut(s) 1853
HphI GGTGA 8 cut(s) 920, 1025, 1446, 1730, 1867, 2096, 2144, 2165
Hpy166II GTNNAC 4 cut(s) 124, 185, 377, 552
Hpy8I GTNNAC 4 cut(s) 124, 185, 377, 552
HpyCH4III ACNGT 3 cut(s) 182, 983, 2084
HpyCH4IV ACGT 1 cut(s) 1615
HpyF3I CTNAG 9 cut(s) 75, 573, 710, 1104, 1229, 1328, 1621, 1748, 2211
HpySE526I ACGT 1 cut(s) 1615
HspAI GCGC 2 cut(s) 12, 1396
Ksp22I TGATCA 1 cut(s) 1057
LmnI GCTCC 9 cut(s) 288, 628, 1270, 1328, 1657, 1800, 1877, 1883, 1961
Lsp1109I GCAGC 9 cut(s) 39, 67, 70, 73, 283, 503, 1774, 1796, 1802
LweI GCATC 6 cut(s) 271, 1053, 1633, 1887, 1942, 2155
MaeI CTAG 6 cut(s) 204, 465, 680, 687, 1115, 2027
MaeII ACGT 1 cut(s) 1615
MaeIII GTNAC 5 cut(s) 682, 1031, 1388, 1430, 1452
MfeI CAATTG 2 cut(s) 1002, 1304
MflI RGATCY 5 cut(s) 1186, 1232, 1367, 1624, 1811
MhlI GDGCHC 4 cut(s) 293, 554, 1124, 1325
MlsI TGGCCA 3 cut(s) 1260, 1922, 1995
MluNI TGGCCA 3 cut(s) 1260, 1922, 1995
MlyI GAGTC 3 cut(s) 746, 854, 1435
MmeI TCCRAC 2 cut(s) 577, 1939
Mox20I TGGCCA 3 cut(s) 1260, 1922, 1995
Mph1103I ATGCAT 1 cut(s) 1902
MroXI GAANNNNTTC 1 cut(s) 1026
MscI TGGCCA 3 cut(s) 1260, 1922, 1995
MseI TTAA 4 cut(s) 239, 245, 522, 1821
MslI CAYNNNNRTG 2 cut(s) 1176, 2016
Msp20I TGGCCA 3 cut(s) 1260, 1922, 1995
MspA1I CMGCKG 4 cut(s) 52, 296, 308, 1787
MspCI CTTAAG 1 cut(s) 521
MspI CCGG 1 cut(s) 1853
MspR9I CCNGG 7 cut(s) 764, 855, 1362, 1853, 1866, 1992, 2183
MunI CAATTG 2 cut(s) 1002, 1304
Mva1269I GAATGC 2 cut(s) 540, 1660
MvaI CCWGG 6 cut(s) 764, 855, 1362, 1866, 1992, 2183
MvnI CGCG 1 cut(s) 1443
NciI CCSGG 1 cut(s) 1853
NcoI CCATGG 2 cut(s) 499, 904
NlaIV GGNNCC 8 cut(s) 290, 486, 1085, 1324, 1517, 1557, 1873, 1989
NmuCI GTSAC 4 cut(s) 1031, 1388, 1430, 1452
NruI TCGCGA 1 cut(s) 1443
NsiI ATGCAT 1 cut(s) 1902
NspI RCATGY 1 cut(s) 191
PagI TCATGA 1 cut(s) 937
PaqCI CACCTGC 1 cut(s) 355
PceI AGGCCT 2 cut(s) 98, 1465
PcsI WCGNNNNNNNCGW 2 cut(s) 138, 1036
PctI GAATGC 2 cut(s) 540, 1660
PdmI GAANNNNTTC 1 cut(s) 1026
PfeI GAWTC 4 cut(s) 568, 890, 1295, 1756
PflFI GACNNNGTC 1 cut(s) 1936
PflMI CCANNNNNTGG 1 cut(s) 653
PfoI TCCNGGA 1 cut(s) 853
PleI GAGTC 3 cut(s) 746, 853, 1434
PpsI GAGTC 3 cut(s) 746, 853, 1434
PshAI GACNNNNGTC 1 cut(s) 1437
Psp6I CCWGG 6 cut(s) 762, 853, 1360, 1864, 1990, 2181
PspFI CCCAGC 2 cut(s) 292, 487
PspGI CCWGG 6 cut(s) 762, 853, 1360, 1864, 1990, 2181
PspN4I GGNNCC 8 cut(s) 290, 486, 1085, 1324, 1517, 1557, 1873, 1989
PstI CTGCAG 2 cut(s) 57, 1792
PstNI CAGNNNCTG 2 cut(s) 1796, 2168
PsuI RGATCY 5 cut(s) 1186, 1232, 1367, 1624, 1811
PsyI GACNNNGTC 1 cut(s) 1936
PvuII CAGCTG 4 cut(s) 52, 296, 308, 1787
RruI TCGCGA 1 cut(s) 1443
RsaI GTAC 3 cut(s) 197, 505, 678
RsaNI GTAC 3 cut(s) 196, 504, 677
RseI CAYNNNNRTG 2 cut(s) 1176, 2016
SaqAI TTAA 4 cut(s) 239, 245, 522, 1821
SchI GAGTC 3 cut(s) 746, 854, 1435
ScrFI CCNGG 7 cut(s) 764, 855, 1362, 1853, 1866, 1992, 2183
SduI GDGCHC 4 cut(s) 293, 554, 1124, 1325
SfaNI GCATC 6 cut(s) 271, 1053, 1633, 1887, 1942, 2155
SfcI CTRYAG 3 cut(s) 53, 756, 1788
SinI GGWCC 5 cut(s) 311, 449, 1084, 1516, 2068
SmiMI CAYNNNNRTG 2 cut(s) 1176, 2016
SmlI CTYRAG 4 cut(s) 370, 521, 555, 2063
SmoI CTYRAG 4 cut(s) 370, 521, 555, 2063
SpeI ACTAGT 2 cut(s) 464, 679
SseBI AGGCCT 2 cut(s) 98, 1465
SsiI CCGC 2 cut(s) 26, 32
SspMI CTAG 6 cut(s) 204, 465, 680, 687, 1115, 2027
StuI AGGCCT 2 cut(s) 98, 1465
StyD4I CCNGG 7 cut(s) 762, 853, 1360, 1851, 1864, 1990, 2181
StyI CCWWGG 5 cut(s) 203, 499, 904, 1483, 1669
TaaI ACNGT 3 cut(s) 182, 983, 2084
TaiI ACGT 1 cut(s) 1618
TaqI TCGA 2 cut(s) 1018, 1495
TatI WGTACW 2 cut(s) 195, 676
TauI GCSGC 1 cut(s) 28
TfiI GAWTC 4 cut(s) 568, 890, 1295, 1756
Tru1I TTAA 4 cut(s) 239, 245, 522, 1821
Tru9I TTAA 4 cut(s) 239, 245, 522, 1821
TscAI CASTG 2 cut(s) 187, 1954
TseFI GTSAC 4 cut(s) 1031, 1388, 1430, 1452
TseI GCWGC 9 cut(s) 52, 55, 58, 61, 296, 491, 1784, 1787, 1790
Tsp45I GTSAC 4 cut(s) 1031, 1388, 1430, 1452
TspDTI ATGAA 7 cut(s) 578, 758, 894, 1089, 1599, 1986, 2070
TspRI CASTG 2 cut(s) 187, 1954
Tth111I GACNNNGTC 1 cut(s) 1936
Van91I CCANNNNNTGG 1 cut(s) 653
Vha464I CTTAAG 1 cut(s) 521
VneI GTGCAC 1 cut(s) 550
VpaK11BI GGWCC 5 cut(s) 311, 449, 1084, 1516, 2068
XagI CCTNNNNNAGG 2 cut(s) 103, 2186
XapI RAATTY 3 cut(s) 241, 955, 1546
XceI RCATGY 1 cut(s) 191
XmaJI CCTAGG 1 cut(s) 203
XmiI GTMKAC 1 cut(s) 123
XmnI GAANNNNTTC 1 cut(s) 1026
XspI CTAG 6 cut(s) 204, 465, 680, 687, 1115, 2027
Zsp2I ATGCAT 1 cut(s) 1902
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.