Rh7DG000400

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0013265
Physical Location & Seq
Reverse (-)
48259 .. 51919
3661 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG000400.1

Sequence Viewer

Length: 1677 bp
ATGAAGATTCCTCAGGTAAGTGCCTCAAAGATTGTTGGAGTGCCTCCTCAATCCAAACCTGCTCCAAAGGTTGAAACTGCACCACCACGAAATGGAGTTGGCATTGAGAGGAATGTACTAGTAACTAGAGACTTTGACGATGAGGCTCTTAGATACAAGGCAAGAAGTGTTTTGCCTGCTATGAATGGAGACTCTACAGGTCAGGCCAATCATTTTCTTCAGGCTCATGTATCAGAAAATCATGGTTTCCAAAATGGCAAGGATGTTGATGAGCATTTGAGGGAGTCTTCTCCTGGATTTGATGTTCTTGTAGATGATGAACTTGGAGATTCTGATTACTACCATGGTGAAGAACAATTTGGAATAAAAAGAGGTCATGACGGAAGGAACTTGAATTCTGTGAATGAGTATGATTTGGACTGTCCTACTGACTACAATTCAATTGCTGATGGTGATCGAGAAAGGTTTCGTGACCCACGAGGTTATGGCCCTTATGATCAGATGCAAGGGAGATATGCTTGGGACCAGCACAGGGCTTCATCTGAGAGACTTCTAGTGGGCTCTGCTCATTCGGAGAGGAGGGGTTATCGTAAATCTGATAGTCCAGATCACATTGATGGGTCAGATCTGCGACATCGTTTGTCCAAACGTAGGAGGGGAAATGGTCTGAGATCCATCATCAGCAATGACTACGATGGCCATGTTGAGGAGCGAAAAAGCCGTCCTCGTAGGGATTCACAGCAATTGCCCTCACATGAGGGCTCCCTCAGCAGTCGTCTTCGTGGTAGAATAAAGCTTCCAGGTGGATCTTCTCCAGTCAATAGTAGTGACTTGCGCCAAGAGAGGGAAGCTGACAGAGGAAGGAGTCGTGACAGAAGTCGCGATGGATTGTCACCCAGAAGGCCTCAAATTATGTCCCACCAAGGAAGGCTTCGAGACAGAATACAAGGAAGGGTCCAAGAGGACTATAATAATGAGGTTAGAAATTTCGGGGTTCCTCGTATGAGGAGAGAGATAGTGGATGAAAGAAGCACAGAGTTTTCTCATCCAAAACGTCTCTCAGAGCTGAAAGGTGGGGTAGATGCAGAAATTAGGGAGCATTCTTACCTTGGAAAACCAAATAATGTGAAGATGGATAATAATCAGCTATCTGAAGGTGATCTCTCATTTGAAGGGCCAAAGCCTCTTAGCGAGATTCTGAAGAGGAAGAGAGAAGCTGAAGCAGCTGCAGCTTCTGGGAGCAGGAAAAGATCTTCTGTTAATAAACAACGCAACAATGAGAAAGAAGGCCCGGTAAGAAATCCAGGTGGCTCTGAGACAGGAGCTATTACAATGATGCATAACAGTCAGTCCCCTGTGGCCAAAGAAGAGACAAAGTCTGCAACCACTGATGCAGTTGGAGCTGAAAATGAAAAAATTGATGTGGCTCCTGGCCAGTCTTCCGAAGGACATAATGATGGCGAGCTAGAGACTGAAGATGGTCTGATATATGATGAAACACTTGAGGACCACGAGCTTGACGGTGAAGATCAGAGGGAAGGGGAATATGATTATGAGCAAGGAGAGGATGGTGAATATACTTACGAAGAAGGTGAAAATGCAGATGCTGAAGAGGAATACCTGGAGGAGGAAGACGGGGATGACTTTGCTAAGAAGATTGGTGTCATGTTCTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CCCH_2 zf-CCCH_3

Protein Analysis

558

Amino Acids

62.8

Weight (kDa)

5.23

Isoelectric Point (pI)

58.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013265)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G02160
fragaria_vesca FvH4_5g18690 FvH4_5g18690
malus_domestica MD16G1008200.v1.1
prunus_persica Prupe.1G342700_v2.0.a1
pyrus_communis pycom13g00840 pycom16g00800 pycom16g00810
rosa_chinensis RchiOBHm_Chr7g0176801
rosa_laevigata RLG00000005584
rosa_multiflora Rmu_sc0005162.1_g000002
rosa_roxburghii Rroxscaffold_3G00276400
rosa_rugosa Rorug06G0401100
rosa_samantha Rh7AG000100 Rh7BG000300 Rh7CG000100 Rh7DG000400
rosa_wichuraiana Rw7G000010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 67
AccB7I CCANNNNNTGG 1 cut(s) 92
AccII CGCG 1 cut(s) 882
AclWI GGATC 2 cut(s) 666, 814
AcoI YGGCCR 3 cut(s) 697, 1359, 1432
AcsI RAATTY 2 cut(s) 394, 985
AcuI CTGAAG 6 cut(s) 203, 1173, 1220, 1239, 1494, 1629
AfaI GTAC 1 cut(s) 117
AfiI CCNNNNNNNGG 6 cut(s) 92, 532, 651, 706, 844, 1627
AgsI TTSAA 4 cut(s) 74, 394, 441, 1172
AhlI ACTAGT 1 cut(s) 118
AjnI CCWGG 5 cut(s) 292, 799, 1303, 1429, 1620
AjuI GAANNNNNNNTTGG 4 cut(s) 342, 374, 915, 947
AloI GAACNNNNNNTCC 2 cut(s) 288, 320
Alw26I GTCTC 8 cut(s) 123, 183, 541, 930, 1061, 1310, 1364, 1463
AlwI GGATC 2 cut(s) 666, 814
AlwNI CAGNNNCTG 2 cut(s) 1235, 1607
AoxI GGCC 8 cut(s) 204, 487, 697, 902, 1175, 1288, 1359, 1432
ApeKI GCWGC 3 cut(s) 1223, 1226, 1229
ApoI RAATTY 2 cut(s) 394, 985
ArsI GACNNNNNNTTYG 2 cut(s) 706, 738
Asp700I GAANNNNTTC 1 cut(s) 465
AspLEI GCGC 1 cut(s) 837
AspS9I GGNCC 6 cut(s) 488, 523, 955, 1175, 1289, 1507
AsuC2I CCSGG 1 cut(s) 1292
AsuHPI GGTGA 7 cut(s) 359, 464, 885, 1169, 1535, 1583, 1604
AvaII GGWCC 3 cut(s) 523, 955, 1507
AxyI CCTNAGG 1 cut(s) 12
BalI TGGCCA 3 cut(s) 699, 1361, 1434
BanII GRGCYC 2 cut(s) 563, 764
BauI CACGAG 2 cut(s) 477, 1511
BbsI GAAGAC 4 cut(s) 279, 770, 1431, 1638
BbvCI CCTCAGC 1 cut(s) 767
BbvI GCAGC 3 cut(s) 1213, 1235, 1241
BccI CCATC 9 cut(s) 443, 611, 683, 689, 878, 1126, 1451, 1472, 1562
BceAI ACGGC 1 cut(s) 705
BciT130I CCWGG 5 cut(s) 294, 801, 1305, 1431, 1622
BclI TGATCA 1 cut(s) 496
BcnI CCSGG 1 cut(s) 1292
BcoDI GTCTC 8 cut(s) 123, 183, 541, 930, 1061, 1310, 1364, 1463
BcuI ACTAGT 1 cut(s) 118
BfaI CTAG 4 cut(s) 119, 126, 554, 1466
BfmI CTRYAG 2 cut(s) 195, 1227
BfuAI ACCTGC 1 cut(s) 67
BglII AGATCT 2 cut(s) 625, 1250
BisI GCNGC 3 cut(s) 1224, 1227, 1230
BlsI GCNGC 3 cut(s) 1225, 1228, 1231
Bme1390I CCNGG 6 cut(s) 294, 801, 1292, 1305, 1431, 1622
Bme18I GGWCC 3 cut(s) 523, 955, 1507
BmgT120I GGNCC 6 cut(s) 488, 523, 955, 1175, 1289, 1507
BmiI GGNNCC 5 cut(s) 524, 763, 956, 996, 1428
BmrFI CCNGG 6 cut(s) 294, 801, 1292, 1305, 1431, 1622
BmsI GCATC 5 cut(s) 492, 1072, 1326, 1381, 1594
BoxI GACNNNNGTC 1 cut(s) 876
BpiI GAAGAC 4 cut(s) 279, 770, 1431, 1638
BpmI CTGGAG 2 cut(s) 798, 1643
Bpu10I CCTNAGC 1 cut(s) 767
BpuEI CTTGAG 1 cut(s) 1523
BpuMI CCSGG 1 cut(s) 1292
BsaBI GATNNNNATC 2 cut(s) 453, 1140
BsaJI CCNNGG 3 cut(s) 343, 922, 1108
Bsc4I CCNNNNNNNGG 6 cut(s) 92, 532, 651, 706, 844, 1627
Bse1I ACTGG 2 cut(s) 815, 1435
Bse21I CCTNAGG 1 cut(s) 12
Bse3DI GCAATG 1 cut(s) 691
Bse8I GATNNNNATC 2 cut(s) 453, 1140
BseBI CCWGG 5 cut(s) 294, 801, 1305, 1431, 1622
BseDI CCNNGG 3 cut(s) 343, 922, 1108
BseGI GGATG 5 cut(s) 268, 1027, 1045, 1573, 1645
BseJI GATNNNNATC 2 cut(s) 453, 1140
BseLI CCNNNNNNNGG 6 cut(s) 92, 532, 651, 706, 844, 1627
BseMI GCAATG 1 cut(s) 691
BseMII CTCAG 6 cut(s) 26, 534, 659, 781, 1074, 1305
BseNI ACTGG 2 cut(s) 815, 1435
BseRI GAGGAG 5 cut(s) 36, 592, 722, 1021, 1640
BseXI GCAGC 3 cut(s) 1213, 1235, 1241
BsgI GTGCAG 1 cut(s) 63
Bsh1236I CGCG 1 cut(s) 882
BshFI GGCC 8 cut(s) 206, 489, 699, 904, 1177, 1290, 1361, 1434
BsiSI CCGG 1 cut(s) 1292
BslFI GGGAC 3 cut(s) 536, 901, 1336
BslI CCNNNNNNNGG 6 cut(s) 92, 532, 651, 706, 844, 1627
BsmAI GTCTC 8 cut(s) 123, 183, 541, 930, 1061, 1310, 1364, 1463
BsmBI CGTCTC 1 cut(s) 1061
BsmFI GGGAC 3 cut(s) 536, 901, 1336
BsmI GAATGC 1 cut(s) 1099
BsnI GGCC 8 cut(s) 206, 489, 699, 904, 1177, 1290, 1361, 1434
Bsp1286I GDGCHC 2 cut(s) 563, 764
Bsp143I GATC 9 cut(s) 454, 496, 607, 625, 671, 806, 1159, 1250, 1528
Bsp19I CCATGG 1 cut(s) 343
Bsp68I TCGCGA 1 cut(s) 882
BspANI GGCC 8 cut(s) 206, 489, 699, 904, 1177, 1290, 1361, 1434
BspCNI CTCAG 6 cut(s) 25, 535, 660, 780, 1073, 1306
BspFNI CGCG 1 cut(s) 882
BspHI TCATGA 1 cut(s) 376
BspLI GGNNCC 5 cut(s) 524, 763, 956, 996, 1428
BspMAI CTGCAG 1 cut(s) 1231
BspMI ACCTGC 1 cut(s) 67
BspPI GGATC 2 cut(s) 666, 814
BsrDI GCAATG 1 cut(s) 691
BsrI ACTGG 2 cut(s) 815, 1435
BssECI CCNNGG 3 cut(s) 343, 922, 1108
BssMI GATC 9 cut(s) 454, 496, 607, 625, 671, 806, 1159, 1250, 1528
BssSI CACGAG 2 cut(s) 477, 1511
BssT1I CCWWGG 3 cut(s) 343, 922, 1108
Bst2BI CACGAG 2 cut(s) 477, 1511
Bst2UI CCWGG 5 cut(s) 294, 801, 1305, 1431, 1622
Bst4CI ACNGT 3 cut(s) 422, 1346, 1523
Bst6I CTCTTC 4 cut(s) 1196, 1202, 1362, 1605
BstC8I GCNNGC 2 cut(s) 177, 1463
BstDEI CTNAG 9 cut(s) 12, 149, 543, 668, 767, 1060, 1187, 1314, 1650
BstDSI CCRYGG 1 cut(s) 343
BstENI CCTNNNNNAGG 1 cut(s) 1625
BstF5I GGATG 5 cut(s) 268, 1027, 1045, 1573, 1645
BstFNI CGCG 1 cut(s) 882
BstHHI GCGC 1 cut(s) 837
BstKTI GATC 9 cut(s) 457, 499, 610, 628, 674, 809, 1162, 1253, 1531
BstMAI GTCTC 8 cut(s) 123, 183, 541, 930, 1061, 1310, 1364, 1463
BstMBI GATC 9 cut(s) 454, 496, 607, 625, 671, 806, 1159, 1250, 1528
BstMWI GCNNNNNNNGC 4 cut(s) 768, 1223, 1229, 1400
BstNI CCWGG 5 cut(s) 294, 801, 1305, 1431, 1622
BstPAI GACNNNNGTC 1 cut(s) 876
BstSCI CCNGG 6 cut(s) 292, 799, 1290, 1303, 1429, 1620
BstSFI CTRYAG 2 cut(s) 195, 1227
BstUI CGCG 1 cut(s) 882
BstV1I GCAGC 3 cut(s) 1213, 1235, 1241
BstV2I GAAGAC 4 cut(s) 279, 770, 1431, 1638
BstX2I RGATCY 4 cut(s) 625, 671, 806, 1250
BstYI RGATCY 4 cut(s) 625, 671, 806, 1250
Bsu36I CCTNAGG 1 cut(s) 12
BsuRI GGCC 8 cut(s) 206, 489, 699, 904, 1177, 1290, 1361, 1434
BtgI CCRYGG 1 cut(s) 343
BtgZI GCGATG 1 cut(s) 897
BtsCI GGATG 5 cut(s) 268, 1027, 1045, 1573, 1645
BtsIMutI CAGTG 1 cut(s) 1386
BtuMI TCGCGA 1 cut(s) 882
BveI ACCTGC 1 cut(s) 67
Cac8I GCNNGC 2 cut(s) 177, 1463
CaiI CAGNNNCTG 2 cut(s) 1235, 1607
CciI TCATGA 1 cut(s) 376
CfoI GCGC 1 cut(s) 837
Cfr13I GGNCC 6 cut(s) 488, 523, 955, 1175, 1289, 1507
Csp6I GTAC 1 cut(s) 116
CviAII CATG 7 cut(s) 227, 242, 344, 377, 701, 755, 1666
CviQI GTAC 1 cut(s) 116
DdeI CTNAG 9 cut(s) 12, 149, 543, 668, 767, 1060, 1187, 1314, 1650
DpnI GATC 9 cut(s) 456, 498, 609, 627, 673, 808, 1161, 1252, 1530
DpnII GATC 9 cut(s) 454, 496, 607, 625, 671, 806, 1159, 1250, 1528
EaeI YGGCCR 3 cut(s) 697, 1359, 1432
Eam1104I CTCTTC 4 cut(s) 1196, 1202, 1362, 1605
EarI CTCTTC 4 cut(s) 1196, 1202, 1362, 1605
Eco130I CCWWGG 3 cut(s) 343, 922, 1108
Eco147I AGGCCT 1 cut(s) 904
Eco24I GRGCYC 2 cut(s) 563, 764
Eco47I GGWCC 3 cut(s) 523, 955, 1507
Eco57I CTGAAG 6 cut(s) 203, 1173, 1220, 1239, 1494, 1629
Eco81I CCTNAGG 1 cut(s) 12
EcoNI CCTNNNNNAGG 1 cut(s) 1625
EcoRI GAATTC 1 cut(s) 394
EcoRII CCWGG 5 cut(s) 292, 799, 1303, 1429, 1620
EcoT14I CCWWGG 3 cut(s) 343, 922, 1108
EcoT22I ATGCAT 1 cut(s) 1341
EcoT38I GRGCYC 2 cut(s) 563, 764
ErhI CCWWGG 3 cut(s) 343, 922, 1108
Esp3I CGTCTC 1 cut(s) 1061
FaeI CATG 7 cut(s) 230, 245, 347, 380, 704, 758, 1669
FalI AAGNNNNNCTT 2 cut(s) 915, 947
FaqI GGGAC 3 cut(s) 536, 901, 1336
FatI CATG 7 cut(s) 226, 241, 343, 376, 700, 754, 1665
FbaI TGATCA 1 cut(s) 496
Fnu4HI GCNGC 3 cut(s) 1224, 1227, 1230
FokI GGATG 5 cut(s) 275, 1032, 1034, 1580, 1652
FriOI GRGCYC 2 cut(s) 563, 764
Fsp4HI GCNGC 3 cut(s) 1224, 1227, 1230
FspBI CTAG 4 cut(s) 119, 126, 554, 1466
GlaI GCGC 1 cut(s) 836
GluI GCNGC 3 cut(s) 1224, 1227, 1230
GsuI CTGGAG 2 cut(s) 798, 1643
HaeIII GGCC 8 cut(s) 206, 489, 699, 904, 1177, 1290, 1361, 1434
HapII CCGG 1 cut(s) 1292
HhaI GCGC 1 cut(s) 837
Hin1II CATG 7 cut(s) 230, 245, 347, 380, 704, 758, 1669
Hin6I GCGC 1 cut(s) 835
HinP1I GCGC 1 cut(s) 835
HindIII AAGCTT 1 cut(s) 794
HinfI GANTC 7 cut(s) 7, 191, 284, 329, 734, 865, 1195
HpaII CCGG 1 cut(s) 1292
HphI GGTGA 7 cut(s) 359, 464, 885, 1169, 1535, 1583, 1604
Hpy188III TCNNGA 8 cut(s) 377, 458, 470, 605, 869, 881, 935, 1674
HpyCH4III ACNGT 3 cut(s) 422, 1346, 1523
HpyCH4IV ACGT 2 cut(s) 649, 1054
HpyCH4V TGCA 8 cut(s) 80, 505, 1085, 1229, 1339, 1382, 1394, 1601
HpyF10VI GCNNNNNNNGC 4 cut(s) 768, 1223, 1229, 1400
HpyF3I CTNAG 9 cut(s) 12, 149, 543, 668, 767, 1060, 1187, 1314, 1650
HpySE526I ACGT 2 cut(s) 649, 1054
Hsp92II CATG 7 cut(s) 230, 245, 347, 380, 704, 758, 1669
HspAI GCGC 1 cut(s) 835
Ksp22I TGATCA 1 cut(s) 496
Kzo9I GATC 9 cut(s) 454, 496, 607, 625, 671, 806, 1159, 1250, 1528
LmnI GCTCC 8 cut(s) 67, 709, 767, 1096, 1239, 1322, 1400, 1432
Lsp1109I GCAGC 3 cut(s) 1213, 1235, 1241
LweI GCATC 5 cut(s) 492, 1072, 1326, 1381, 1594
MaeI CTAG 4 cut(s) 119, 126, 554, 1466
MaeII ACGT 2 cut(s) 649, 1054
MaeIII GTNAC 5 cut(s) 121, 470, 827, 869, 891
MalI GATC 9 cut(s) 456, 498, 609, 627, 673, 808, 1161, 1252, 1530
MboI GATC 9 cut(s) 454, 496, 607, 625, 671, 806, 1159, 1250, 1528
MfeI CAATTG 2 cut(s) 441, 743
MflI RGATCY 4 cut(s) 625, 671, 806, 1250
MhlI GDGCHC 2 cut(s) 563, 764
MlsI TGGCCA 3 cut(s) 699, 1361, 1434
MluCI AATT 9 cut(s) 356, 394, 436, 441, 743, 909, 985, 1089, 1416
MluNI TGGCCA 3 cut(s) 699, 1361, 1434
MlyI GAGTC 3 cut(s) 185, 293, 874
MmeI TCCRAC 2 cut(s) 16, 1378
Mox20I TGGCCA 3 cut(s) 699, 1361, 1434
Mph1103I ATGCAT 1 cut(s) 1341
MroXI GAANNNNTTC 1 cut(s) 465
MscI TGGCCA 3 cut(s) 699, 1361, 1434
MseI TTAA 1 cut(s) 1260
MslI CAYNNNNRTG 2 cut(s) 615, 1455
Msp20I TGGCCA 3 cut(s) 699, 1361, 1434
MspA1I CMGCKG 1 cut(s) 1226
MspI CCGG 1 cut(s) 1292
MspR9I CCNGG 6 cut(s) 294, 801, 1292, 1305, 1431, 1622
MunI CAATTG 2 cut(s) 441, 743
Mva1269I GAATGC 1 cut(s) 1099
MvaI CCWGG 5 cut(s) 294, 801, 1305, 1431, 1622
MvnI CGCG 1 cut(s) 882
MwoI GCNNNNNNNGC 4 cut(s) 768, 1223, 1229, 1400
NciI CCSGG 1 cut(s) 1292
NcoI CCATGG 1 cut(s) 343
NdeII GATC 9 cut(s) 454, 496, 607, 625, 671, 806, 1159, 1250, 1528
NlaIII CATG 7 cut(s) 230, 245, 347, 380, 704, 758, 1669
NlaIV GGNNCC 5 cut(s) 524, 763, 956, 996, 1428
NmuCI GTSAC 4 cut(s) 470, 827, 869, 891
NruI TCGCGA 1 cut(s) 882
NsiI ATGCAT 1 cut(s) 1341
PagI TCATGA 1 cut(s) 376
PceI AGGCCT 1 cut(s) 904
PcsI WCGNNNNNNNCGW 1 cut(s) 475
PctI GAATGC 1 cut(s) 1099
PdmI GAANNNNTTC 1 cut(s) 465
PfeI GAWTC 4 cut(s) 7, 329, 734, 1195
PflFI GACNNNGTC 1 cut(s) 1375
PflMI CCANNNNNTGG 1 cut(s) 92
PfoI TCCNGGA 1 cut(s) 292
PkrI GCNGC 3 cut(s) 1225, 1228, 1231
PleI GAGTC 3 cut(s) 185, 292, 873
PpsI GAGTC 3 cut(s) 185, 292, 873
PshAI GACNNNNGTC 1 cut(s) 876
Psp6I CCWGG 5 cut(s) 292, 799, 1303, 1429, 1620
PspGI CCWGG 5 cut(s) 292, 799, 1303, 1429, 1620
PspN4I GGNNCC 5 cut(s) 524, 763, 956, 996, 1428
PspPI GGNCC 6 cut(s) 488, 523, 955, 1175, 1289, 1507
PstI CTGCAG 1 cut(s) 1231
PstNI CAGNNNCTG 2 cut(s) 1235, 1607
PsuI RGATCY 4 cut(s) 625, 671, 806, 1250
PsyI GACNNNGTC 1 cut(s) 1375
PvuII CAGCTG 1 cut(s) 1226
RruI TCGCGA 1 cut(s) 882
RsaI GTAC 1 cut(s) 117
RsaNI GTAC 1 cut(s) 116
RseI CAYNNNNRTG 2 cut(s) 615, 1455
SaqAI TTAA 1 cut(s) 1260
SatI GCNGC 3 cut(s) 1224, 1227, 1230
Sau3AI GATC 9 cut(s) 454, 496, 607, 625, 671, 806, 1159, 1250, 1528
Sau96I GGNCC 6 cut(s) 488, 523, 955, 1175, 1289, 1507
SchI GAGTC 3 cut(s) 185, 293, 874
ScrFI CCNGG 6 cut(s) 294, 801, 1292, 1305, 1431, 1622
SduI GDGCHC 2 cut(s) 563, 764
SfaNI GCATC 5 cut(s) 492, 1072, 1326, 1381, 1594
SfcI CTRYAG 2 cut(s) 195, 1227
SinI GGWCC 3 cut(s) 523, 955, 1507
SmiMI CAYNNNNRTG 2 cut(s) 615, 1455
SmlI CTYRAG 1 cut(s) 1502
SmoI CTYRAG 1 cut(s) 1502
SpeI ACTAGT 1 cut(s) 118
Sse9I AATT 9 cut(s) 356, 394, 436, 441, 743, 909, 985, 1089, 1416
SseBI AGGCCT 1 cut(s) 904
SspMI CTAG 4 cut(s) 119, 126, 554, 1466
StuI AGGCCT 1 cut(s) 904
StyD4I CCNGG 6 cut(s) 292, 799, 1290, 1303, 1429, 1620
StyI CCWWGG 3 cut(s) 343, 922, 1108
TaaI ACNGT 3 cut(s) 422, 1346, 1523
TaiI ACGT 2 cut(s) 652, 1057
TaqI TCGA 2 cut(s) 457, 934
TasI AATT 9 cut(s) 356, 394, 436, 441, 743, 909, 985, 1089, 1416
TatI WGTACW 1 cut(s) 115
TfiI GAWTC 4 cut(s) 7, 329, 734, 1195
Tru1I TTAA 1 cut(s) 1260
Tru9I TTAA 1 cut(s) 1260
TscAI CASTG 1 cut(s) 1393
TseFI GTSAC 4 cut(s) 470, 827, 869, 891
TseI GCWGC 3 cut(s) 1223, 1226, 1229
Tsp45I GTSAC 4 cut(s) 470, 827, 869, 891
TspDTI ATGAA 7 cut(s) 17, 197, 333, 528, 1038, 1425, 1509
TspGWI ACGGA 1 cut(s) 396
TspRI CASTG 1 cut(s) 1393
Tth111I GACNNNGTC 1 cut(s) 1375
Van91I CCANNNNNTGG 1 cut(s) 92
VpaK11BI GGWCC 3 cut(s) 523, 955, 1507
XagI CCTNNNNNAGG 1 cut(s) 1625
XapI RAATTY 2 cut(s) 394, 985
XmnI GAANNNNTTC 1 cut(s) 465
XspI CTAG 4 cut(s) 119, 126, 554, 1466
Zsp2I ATGCAT 1 cut(s) 1341
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.