Rw7G000010

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0013265
Physical Location & Seq
Reverse (-)
42550 .. 46067
3518 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G000010.1

Sequence Viewer

Length: 2238 bp
ATGGTAGTCGGCGCACAACCAAAGCCGCAACCGCAATCACAACCTCAACAGCTGCAGCAGCAGCAACCCCAACCTGAGGCTTCTGCTGAAGAGGAGGCCTTGAAGAGGAACACCGATTGTGTCTACTTCCTCGCCTCGCCCGTCTCCTGCAAAAAGGGAAGTGAATGTGAATATCGCCACAGTGAACATGCTTTGTACAATCCTAGGGATTGCTGGTTCTGGTTGAATGGGAATTGCTTAAATTTAAAATGCTCGTTTCGGCATCCACCTCTTGATGGTTTGTTAGGGAGCCCAGCTGCAAGTTCAGCTGGACCTTCTTTGCCTTTATCACATACTGCGACAACACCTGCAACCAATGCTACTTTCAACTCAAGTAAACAAGCAGTCCCCTGTATCTTCTTTCAAAGGGGATTTTGCTCAAAAGCTGATAAATGCCCCTTCTCACATGGACCAAATCCTATTACTAGTAGTAAAGTTCCACAGGCCCCAGCAGCTACCCATGGTACAGAACCTTCAAGTCTTAAGAAGATTTTTGGTGGCATTCAGAAGTGCACTCAAGAGATGAAGATTCCTCAGGTAAGTGCCTCAAAGATTGTTGGAGTGCCTCCTCAATCCAAACCTGCTCCAAAGGTTGAAACTGCACCACCACGAAATGGAGTTGGCATTGAGAGGAATGTACTAGTAACTAGAGACTTTGACGATGAGGCTCTTAGATACAAGGCAAGAAGTGTGTTGCCTGCTATGAATGGAGACTCTACAGGCCAGGCCAATCATTTTCTTCAGGCTCATGTATCAGAAAATCATGGTTTCCAAAATGGCAAGGATGTTGATGAGCATTTGAGGGAGTCTTCTCCTGGATTTGATGTTCTTGTAGATGATGAACTTGGAGATTCTGATTACTACCATGGTGAAGAACAATTTGGAATAAAAAGAGGTCATGATGGAAGGAACTTGAATTCTGTGAATGAGTATGATTTGGACTGTCCTACTGATTACAATTCAATTGCTGATGGTGATCGAGAAAGGTTTCGTGACCCACGAGGTTATGGCCCTTATGATCAGATGCAAGGGAGATATGCTTGGGACCAGCACAGGGCTTCATCTGAGAGACTTCTAGTGGGCTCTGCTCATTCGGAGAGGAGGGGTTATCGTAAATCTGATAGTCCAGATCACATTGATGGGTCAGATCTGCGACATCGTTTGTCCAAACATAGGAGGGGAAATGGTCTGAGATCCATCATCAGCAATGACTACGATGGCCATGTTGAGGAGCGAAAAAGCCGTCCTCGTAGGGATTCACAGCAATTGCCCTCACATGAGGGCTCCCTCAGCAGTCGTCTTCGTGGTAGAATAAAGCTTCCAGGTGGATCTTCTCCAGTCAATAGTAGTGACTTGCGCCAAGAGAGGGAAGCTGACAGAGGAAGGAGTCGTGACAGAAGTCGCGATAGATTGTCACCCAGAAGGCCTCAAATTATGTCCCACCAAGGAAGGCTTCGAGACAGAATACAAGGAAGGGTCCAAGAGGACTATAATAATGAGGTTAGAAATTTTGGGGTTCCTCGTATGAGGAGAGAGATAGTGGATGAAAGAAGCACAGAGTTTTCTCATCCAAAACGTCTCTCAGAGCTGAAAGGTGGGGTAGATGCAGAAATTAGGGAGCATTCTTACCTTGGAAAACCAAATAATGTGAAGATGGATAATAATCAGCTATCTGAAGGTGATCTCTCATTTGAAGGGCCAAAGCCTCTTAGCGAGATTCTGAAGAGGAAGAGAGAAGCTGAAGCAGCTGCAGCTTCTGGGAGCAGGAAAAGATCTTCTGTTAATAAACAACGCAACAATGAGAAAGAAGGCCCGGTGAGAAATCCAGGTGGCTCTGAGACAGGAGCTATTACAATGATGCATAACAGTCAGTCCCCTGTGGCCAAAGAAGAGACAAAGTCTGCAACCACTGATGCAGTTGGAGCTGAAAATGAAAAAATTGATGTGGCCCCTGGCCAGTCTTCCGAAGGACATAATGATGGCGAGCTAGAGACTGAAGATGGTCTGATATATGATGAAACACTTGAGGACCACGAGCTTGACGGTGAAGATCAGAGGGAAGGGGAATATGATTATGAGCAAGGAGAGGATGGTGAATATACTTACGAAGAAGGTGAAAATGCAGATGCTGAAGAGGAATACCTGGAGGAGGAAGACGGGGATGACTTTGCTAAGAAGATTGGTGTCATGTTCTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CCCH_2 zf-CCCH_3

Protein Analysis

745

Amino Acids

83.1

Weight (kDa)

5.63

Isoelectric Point (pI)

58.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCCH_3 PF15663 35 - 89 5.7e-11 Zinc-finger containing family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013265)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G02160
fragaria_vesca FvH4_5g18690 FvH4_5g18690
malus_domestica MD16G1008200.v1.1
prunus_persica Prupe.1G342700_v2.0.a1
pyrus_communis pycom13g00840 pycom16g00800 pycom16g00810
rosa_chinensis RchiOBHm_Chr7g0176801
rosa_laevigata RLG00000005584
rosa_multiflora Rmu_sc0005162.1_g000002
rosa_roxburghii Rroxscaffold_3G00276400
rosa_rugosa Rorug06G0401100
rosa_samantha Rh7AG000100 Rh7BG000300 Rh7CG000100 Rh7DG000400
rosa_wichuraiana Rw7G000010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 355
Acc36I ACCTGC 2 cut(s) 355, 628
AccB7I CCANNNNNTGG 1 cut(s) 653
AccI GTMKAC 1 cut(s) 123
AccII CGCG 1 cut(s) 1443
AciI CCGC 2 cut(s) 26, 32
AclWI GGATC 2 cut(s) 1227, 1375
AcoI YGGCCR 3 cut(s) 1258, 1920, 1993
AcsI RAATTY 3 cut(s) 241, 955, 1546
AcuI CTGAAG 7 cut(s) 108, 764, 1734, 1781, 1800, 2055, 2190
AfaI GTAC 3 cut(s) 197, 505, 678
AfiI CCNNNNNNNGG 9 cut(s) 76, 105, 275, 653, 1093, 1212, 1267, 1405, 2188
AflII CTTAAG 1 cut(s) 521
AgsI TTSAA 9 cut(s) 103, 226, 367, 404, 516, 635, 955, 1002, 1733
AhlI ACTAGT 2 cut(s) 464, 679
AjnI CCWGG 6 cut(s) 762, 853, 1360, 1864, 1990, 2181
AjuI GAANNNNNNNTTGG 6 cut(s) 347, 379, 903, 935, 1476, 1508
AloI GAACNNNNNNTCC 4 cut(s) 200, 232, 849, 881
Alw21I GWGCWC 1 cut(s) 554
Alw26I GTCTC 9 cut(s) 148, 684, 744, 1102, 1491, 1622, 1871, 1925, 2024
Alw44I GTGCAC 1 cut(s) 550
AlwI GGATC 2 cut(s) 1227, 1375
AlwNI CAGNNNCTG 2 cut(s) 1796, 2168
ApaLI GTGCAC 1 cut(s) 550
ApeKI GCWGC 9 cut(s) 52, 55, 58, 61, 296, 491, 1784, 1787, 1790
ApoI RAATTY 3 cut(s) 241, 955, 1546
ArsI GACNNNNNNTTYG 2 cut(s) 1267, 1299
Asp700I GAANNNNTTC 1 cut(s) 1026
AspA2I CCTAGG 1 cut(s) 203
AspLEI GCGC 2 cut(s) 14, 1398
AsuC2I CCSGG 1 cut(s) 1853
AsuHPI GGTGA 8 cut(s) 920, 1025, 1446, 1730, 1867, 2096, 2144, 2165
AvaII GGWCC 5 cut(s) 311, 449, 1084, 1516, 2068
AvrII CCTAGG 1 cut(s) 203
AxyI CCTNAGG 2 cut(s) 75, 573
BaeGI GKGCMC 1 cut(s) 554
BalI TGGCCA 3 cut(s) 1260, 1922, 1995
BanII GRGCYC 3 cut(s) 293, 1124, 1325
BarI GAAGNNNNNNTAC 2 cut(s) 496, 528
BauI CACGAG 2 cut(s) 1038, 2072
BbsI GAAGAC 4 cut(s) 840, 1331, 1992, 2199
Bbv12I GWGCWC 1 cut(s) 554
BbvCI CCTCAGC 1 cut(s) 1328
BbvI GCAGC 9 cut(s) 39, 67, 70, 73, 283, 503, 1774, 1796, 1802
BceAI ACGGC 1 cut(s) 1266
BciT130I CCWGG 6 cut(s) 764, 855, 1362, 1866, 1992, 2183
BclI TGATCA 1 cut(s) 1057
BcnI CCSGG 1 cut(s) 1853
BcoDI GTCTC 9 cut(s) 148, 684, 744, 1102, 1491, 1622, 1871, 1925, 2024
BcuI ACTAGT 2 cut(s) 464, 679
BfaI CTAG 6 cut(s) 204, 465, 680, 687, 1115, 2027
BfmI CTRYAG 3 cut(s) 53, 756, 1788
BfrI CTTAAG 1 cut(s) 521
BfuAI ACCTGC 2 cut(s) 355, 628
BglII AGATCT 2 cut(s) 1186, 1811
BlnI CCTAGG 1 cut(s) 203
Bme1390I CCNGG 7 cut(s) 764, 855, 1362, 1853, 1866, 1992, 2183
Bme18I GGWCC 5 cut(s) 311, 449, 1084, 1516, 2068
BmiI GGNNCC 7 cut(s) 290, 486, 1085, 1324, 1517, 1557, 1989
BmrFI CCNGG 7 cut(s) 764, 855, 1362, 1853, 1866, 1992, 2183
BmsI GCATC 6 cut(s) 271, 1053, 1633, 1887, 1942, 2155
BoxI GACNNNNGTC 1 cut(s) 1437
BpiI GAAGAC 4 cut(s) 840, 1331, 1992, 2199
BpmI CTGGAG 2 cut(s) 1359, 2204
Bpu10I CCTNAGC 1 cut(s) 1328
BpuEI CTTGAG 3 cut(s) 355, 540, 2084
BpuMI CCSGG 1 cut(s) 1853
BsaBI GATNNNNATC 2 cut(s) 1014, 1701
BsaJI CCNNGG 6 cut(s) 203, 499, 904, 1483, 1669, 1990
Bsc4I CCNNNNNNNGG 9 cut(s) 76, 105, 275, 653, 1093, 1212, 1267, 1405, 2188
Bse1I ACTGG 2 cut(s) 1376, 1996
Bse21I CCTNAGG 2 cut(s) 75, 573
Bse3DI GCAATG 1 cut(s) 1252
Bse8I GATNNNNATC 2 cut(s) 1014, 1701
BseBI CCWGG 6 cut(s) 764, 855, 1362, 1866, 1992, 2183
BseDI CCNNGG 6 cut(s) 203, 499, 904, 1483, 1669, 1990
BseGI GGATG 6 cut(s) 262, 829, 1588, 1606, 2134, 2206
BseJI GATNNNNATC 2 cut(s) 1014, 1701
BseLI CCNNNNNNNGG 9 cut(s) 76, 105, 275, 653, 1093, 1212, 1267, 1405, 2188
BseMI GCAATG 1 cut(s) 1252
BseMII CTCAG 7 cut(s) 66, 587, 1095, 1220, 1342, 1635, 1866
BseNI ACTGG 2 cut(s) 1376, 1996
BseRI GAGGAG 6 cut(s) 107, 597, 1153, 1283, 1582, 2201
BseSI GKGCMC 1 cut(s) 554
BseXI GCAGC 9 cut(s) 39, 67, 70, 73, 283, 503, 1774, 1796, 1802
BseYI CCCAGC 2 cut(s) 292, 487
BsgI GTGCAG 1 cut(s) 624
Bsh1236I CGCG 1 cut(s) 1443
BsiHKAI GWGCWC 1 cut(s) 554
BsiSI CCGG 1 cut(s) 1853
BslFI GGGAC 4 cut(s) 371, 1097, 1462, 1897
BslI CCNNNNNNNGG 9 cut(s) 76, 105, 275, 653, 1093, 1212, 1267, 1405, 2188
BsmAI GTCTC 9 cut(s) 148, 684, 744, 1102, 1491, 1622, 1871, 1925, 2024
BsmBI CGTCTC 2 cut(s) 148, 1622
BsmFI GGGAC 4 cut(s) 371, 1097, 1462, 1897
BsmI GAATGC 2 cut(s) 540, 1660
Bsp1286I GDGCHC 4 cut(s) 293, 554, 1124, 1325
Bsp1407I TGTACA 1 cut(s) 195
Bsp143I GATC 9 cut(s) 1015, 1057, 1168, 1186, 1232, 1367, 1720, 1811, 2089
Bsp19I CCATGG 2 cut(s) 499, 904
Bsp68I TCGCGA 1 cut(s) 1443
BspACI CCGC 2 cut(s) 26, 32
BspCNI CTCAG 7 cut(s) 67, 586, 1096, 1221, 1341, 1634, 1867
BspFNI CGCG 1 cut(s) 1443
BspHI TCATGA 1 cut(s) 937
BspLI GGNNCC 7 cut(s) 290, 486, 1085, 1324, 1517, 1557, 1989
BspMAI CTGCAG 2 cut(s) 57, 1792
BspMI ACCTGC 2 cut(s) 355, 628
BspPI GGATC 2 cut(s) 1227, 1375
BspTI CTTAAG 1 cut(s) 521
BsrDI GCAATG 1 cut(s) 1252
BsrGI TGTACA 1 cut(s) 195
BsrI ACTGG 2 cut(s) 1376, 1996
BssECI CCNNGG 6 cut(s) 203, 499, 904, 1483, 1669, 1990
BssMI GATC 9 cut(s) 1015, 1057, 1168, 1186, 1232, 1367, 1720, 1811, 2089
BssSI CACGAG 2 cut(s) 1038, 2072
BssT1I CCWWGG 5 cut(s) 203, 499, 904, 1483, 1669
Bst2BI CACGAG 2 cut(s) 1038, 2072
Bst2UI CCWGG 6 cut(s) 764, 855, 1362, 1866, 1992, 2183
Bst4CI ACNGT 4 cut(s) 182, 983, 1907, 2084
Bst6I CTCTTC 6 cut(s) 84, 98, 1757, 1763, 1923, 2166
BstAFI CTTAAG 1 cut(s) 521
BstAPI GCANNNNNTGC 1 cut(s) 356
BstAUI TGTACA 1 cut(s) 195
BstC8I GCNNGC 2 cut(s) 738, 2024
BstDSI CCRYGG 2 cut(s) 499, 904
BstENI CCTNNNNNAGG 2 cut(s) 103, 2186
BstF5I GGATG 6 cut(s) 262, 829, 1588, 1606, 2134, 2206
BstFNI CGCG 1 cut(s) 1443
BstHHI GCGC 2 cut(s) 14, 1398
BstKTI GATC 9 cut(s) 1018, 1060, 1171, 1189, 1235, 1370, 1723, 1814, 2092
BstMAI GTCTC 9 cut(s) 148, 684, 744, 1102, 1491, 1622, 1871, 1925, 2024
BstMBI GATC 9 cut(s) 1015, 1057, 1168, 1186, 1232, 1367, 1720, 1811, 2089
BstNI CCWGG 6 cut(s) 764, 855, 1362, 1866, 1992, 2183
BstNSI RCATGY 1 cut(s) 191
BstPAI GACNNNNGTC 1 cut(s) 1437
BstSCI CCNGG 7 cut(s) 762, 853, 1360, 1851, 1864, 1990, 2181
BstSFI CTRYAG 3 cut(s) 53, 756, 1788
BstSLI GKGCMC 1 cut(s) 554
BstUI CGCG 1 cut(s) 1443
BstV1I GCAGC 9 cut(s) 39, 67, 70, 73, 283, 503, 1774, 1796, 1802
BstV2I GAAGAC 4 cut(s) 840, 1331, 1992, 2199
BstX2I RGATCY 4 cut(s) 1186, 1232, 1367, 1811
BstYI RGATCY 4 cut(s) 1186, 1232, 1367, 1811
Bsu36I CCTNAGG 2 cut(s) 75, 573
BtgI CCRYGG 2 cut(s) 499, 904
BtsCI GGATG 6 cut(s) 262, 829, 1588, 1606, 2134, 2206
BtsIMutI CAGTG 2 cut(s) 187, 1947
BtuMI TCGCGA 1 cut(s) 1443
BveI ACCTGC 2 cut(s) 355, 628
Cac8I GCNNGC 2 cut(s) 738, 2024
CaiI CAGNNNCTG 2 cut(s) 1796, 2168
CciI TCATGA 1 cut(s) 937
CfoI GCGC 2 cut(s) 14, 1398
Csp6I GTAC 3 cut(s) 196, 504, 677
CviQI GTAC 3 cut(s) 196, 504, 677
DpnI GATC 9 cut(s) 1017, 1059, 1170, 1188, 1234, 1369, 1722, 1813, 2091
DpnII GATC 9 cut(s) 1015, 1057, 1168, 1186, 1232, 1367, 1720, 1811, 2089
DraI TTTAAA 1 cut(s) 246
EaeI YGGCCR 3 cut(s) 1258, 1920, 1993
Eam1104I CTCTTC 6 cut(s) 84, 98, 1757, 1763, 1923, 2166
EarI CTCTTC 6 cut(s) 84, 98, 1757, 1763, 1923, 2166
Eco130I CCWWGG 5 cut(s) 203, 499, 904, 1483, 1669
Eco147I AGGCCT 2 cut(s) 98, 1465
Eco24I GRGCYC 3 cut(s) 293, 1124, 1325
Eco47I GGWCC 5 cut(s) 311, 449, 1084, 1516, 2068
Eco57I CTGAAG 7 cut(s) 108, 764, 1734, 1781, 1800, 2055, 2190
Eco81I CCTNAGG 2 cut(s) 75, 573
EcoNI CCTNNNNNAGG 2 cut(s) 103, 2186
EcoO109I RGGNCCY 1 cut(s) 484
EcoRI GAATTC 1 cut(s) 955
EcoRII CCWGG 6 cut(s) 762, 853, 1360, 1864, 1990, 2181
EcoT14I CCWWGG 5 cut(s) 203, 499, 904, 1483, 1669
EcoT22I ATGCAT 1 cut(s) 1902
EcoT38I GRGCYC 3 cut(s) 293, 1124, 1325
ErhI CCWWGG 5 cut(s) 203, 499, 904, 1483, 1669
Esp3I CGTCTC 2 cut(s) 148, 1622
FalI AAGNNNNNCTT 2 cut(s) 1476, 1508
FaqI GGGAC 4 cut(s) 371, 1097, 1462, 1897
FbaI TGATCA 1 cut(s) 1057
FblI GTMKAC 1 cut(s) 123
FokI GGATG 6 cut(s) 249, 836, 1593, 1595, 2141, 2213
FriOI GRGCYC 3 cut(s) 293, 1124, 1325
FspBI CTAG 6 cut(s) 204, 465, 680, 687, 1115, 2027
GlaI GCGC 2 cut(s) 13, 1397
GsaI CCCAGC 2 cut(s) 296, 491
GsuI CTGGAG 2 cut(s) 1359, 2204
HapII CCGG 1 cut(s) 1853
HhaI GCGC 2 cut(s) 14, 1398
Hin6I GCGC 2 cut(s) 12, 1396
HinP1I GCGC 2 cut(s) 12, 1396
HindIII AAGCTT 1 cut(s) 1355
HinfI GANTC 7 cut(s) 568, 752, 845, 890, 1295, 1426, 1756
HpaII CCGG 1 cut(s) 1853
HphI GGTGA 8 cut(s) 920, 1025, 1446, 1730, 1867, 2096, 2144, 2165
Hpy166II GTNNAC 4 cut(s) 124, 185, 377, 552
Hpy8I GTNNAC 4 cut(s) 124, 185, 377, 552
HpyCH4III ACNGT 4 cut(s) 182, 983, 1907, 2084
HpyCH4IV ACGT 1 cut(s) 1615
HpySE526I ACGT 1 cut(s) 1615
HspAI GCGC 2 cut(s) 12, 1396
Ksp22I TGATCA 1 cut(s) 1057
Kzo9I GATC 9 cut(s) 1015, 1057, 1168, 1186, 1232, 1367, 1720, 1811, 2089
LmnI GCTCC 8 cut(s) 288, 628, 1270, 1328, 1657, 1800, 1883, 1961
Lsp1109I GCAGC 9 cut(s) 39, 67, 70, 73, 283, 503, 1774, 1796, 1802
LweI GCATC 6 cut(s) 271, 1053, 1633, 1887, 1942, 2155
MaeI CTAG 6 cut(s) 204, 465, 680, 687, 1115, 2027
MaeII ACGT 1 cut(s) 1615
MaeIII GTNAC 5 cut(s) 682, 1031, 1388, 1430, 1452
MalI GATC 9 cut(s) 1017, 1059, 1170, 1188, 1234, 1369, 1722, 1813, 2091
MboI GATC 9 cut(s) 1015, 1057, 1168, 1186, 1232, 1367, 1720, 1811, 2089
MfeI CAATTG 2 cut(s) 1002, 1304
MflI RGATCY 4 cut(s) 1186, 1232, 1367, 1811
MhlI GDGCHC 4 cut(s) 293, 554, 1124, 1325
MlsI TGGCCA 3 cut(s) 1260, 1922, 1995
MluNI TGGCCA 3 cut(s) 1260, 1922, 1995
MlyI GAGTC 3 cut(s) 746, 854, 1435
MmeI TCCRAC 2 cut(s) 577, 1939
Mox20I TGGCCA 3 cut(s) 1260, 1922, 1995
Mph1103I ATGCAT 1 cut(s) 1902
MroXI GAANNNNTTC 1 cut(s) 1026
MscI TGGCCA 3 cut(s) 1260, 1922, 1995
MseI TTAA 4 cut(s) 239, 245, 522, 1821
MslI CAYNNNNRTG 2 cut(s) 1176, 2016
Msp20I TGGCCA 3 cut(s) 1260, 1922, 1995
MspA1I CMGCKG 4 cut(s) 52, 296, 308, 1787
MspCI CTTAAG 1 cut(s) 521
MspI CCGG 1 cut(s) 1853
MspR9I CCNGG 7 cut(s) 764, 855, 1362, 1853, 1866, 1992, 2183
MunI CAATTG 2 cut(s) 1002, 1304
Mva1269I GAATGC 2 cut(s) 540, 1660
MvaI CCWGG 6 cut(s) 764, 855, 1362, 1866, 1992, 2183
MvnI CGCG 1 cut(s) 1443
NciI CCSGG 1 cut(s) 1853
NcoI CCATGG 2 cut(s) 499, 904
NdeII GATC 9 cut(s) 1015, 1057, 1168, 1186, 1232, 1367, 1720, 1811, 2089
NlaIV GGNNCC 7 cut(s) 290, 486, 1085, 1324, 1517, 1557, 1989
NmuCI GTSAC 4 cut(s) 1031, 1388, 1430, 1452
NruI TCGCGA 1 cut(s) 1443
NsiI ATGCAT 1 cut(s) 1902
NspI RCATGY 1 cut(s) 191
PagI TCATGA 1 cut(s) 937
PaqCI CACCTGC 1 cut(s) 355
PceI AGGCCT 2 cut(s) 98, 1465
PcsI WCGNNNNNNNCGW 2 cut(s) 138, 1036
PctI GAATGC 2 cut(s) 540, 1660
PdmI GAANNNNTTC 1 cut(s) 1026
PfeI GAWTC 4 cut(s) 568, 890, 1295, 1756
PflFI GACNNNGTC 1 cut(s) 1936
PflMI CCANNNNNTGG 1 cut(s) 653
PfoI TCCNGGA 1 cut(s) 853
PleI GAGTC 3 cut(s) 746, 853, 1434
PpsI GAGTC 3 cut(s) 746, 853, 1434
PshAI GACNNNNGTC 1 cut(s) 1437
Psp6I CCWGG 6 cut(s) 762, 853, 1360, 1864, 1990, 2181
PspFI CCCAGC 2 cut(s) 292, 487
PspGI CCWGG 6 cut(s) 762, 853, 1360, 1864, 1990, 2181
PspN4I GGNNCC 7 cut(s) 290, 486, 1085, 1324, 1517, 1557, 1989
PstI CTGCAG 2 cut(s) 57, 1792
PstNI CAGNNNCTG 2 cut(s) 1796, 2168
PsuI RGATCY 4 cut(s) 1186, 1232, 1367, 1811
PsyI GACNNNGTC 1 cut(s) 1936
PvuII CAGCTG 4 cut(s) 52, 296, 308, 1787
RruI TCGCGA 1 cut(s) 1443
RsaI GTAC 3 cut(s) 197, 505, 678
RsaNI GTAC 3 cut(s) 196, 504, 677
RseI CAYNNNNRTG 2 cut(s) 1176, 2016
SaqAI TTAA 4 cut(s) 239, 245, 522, 1821
Sau3AI GATC 9 cut(s) 1015, 1057, 1168, 1186, 1232, 1367, 1720, 1811, 2089
SchI GAGTC 3 cut(s) 746, 854, 1435
ScrFI CCNGG 7 cut(s) 764, 855, 1362, 1853, 1866, 1992, 2183
SduI GDGCHC 4 cut(s) 293, 554, 1124, 1325
SfaNI GCATC 6 cut(s) 271, 1053, 1633, 1887, 1942, 2155
SfcI CTRYAG 3 cut(s) 53, 756, 1788
SinI GGWCC 5 cut(s) 311, 449, 1084, 1516, 2068
SmiMI CAYNNNNRTG 2 cut(s) 1176, 2016
SmlI CTYRAG 4 cut(s) 370, 521, 555, 2063
SmoI CTYRAG 4 cut(s) 370, 521, 555, 2063
SpeI ACTAGT 2 cut(s) 464, 679
SseBI AGGCCT 2 cut(s) 98, 1465
SsiI CCGC 2 cut(s) 26, 32
SspMI CTAG 6 cut(s) 204, 465, 680, 687, 1115, 2027
StuI AGGCCT 2 cut(s) 98, 1465
StyD4I CCNGG 7 cut(s) 762, 853, 1360, 1851, 1864, 1990, 2181
StyI CCWWGG 5 cut(s) 203, 499, 904, 1483, 1669
TaaI ACNGT 4 cut(s) 182, 983, 1907, 2084
TaiI ACGT 1 cut(s) 1618
TaqI TCGA 2 cut(s) 1018, 1495
TatI WGTACW 2 cut(s) 195, 676
TauI GCSGC 1 cut(s) 28
TfiI GAWTC 4 cut(s) 568, 890, 1295, 1756
Tru1I TTAA 4 cut(s) 239, 245, 522, 1821
Tru9I TTAA 4 cut(s) 239, 245, 522, 1821
TscAI CASTG 2 cut(s) 187, 1954
TseFI GTSAC 4 cut(s) 1031, 1388, 1430, 1452
TseI GCWGC 9 cut(s) 52, 55, 58, 61, 296, 491, 1784, 1787, 1790
Tsp45I GTSAC 4 cut(s) 1031, 1388, 1430, 1452
TspDTI ATGAA 7 cut(s) 578, 758, 894, 1089, 1599, 1986, 2070
TspRI CASTG 2 cut(s) 187, 1954
Tth111I GACNNNGTC 1 cut(s) 1936
Van91I CCANNNNNTGG 1 cut(s) 653
Vha464I CTTAAG 1 cut(s) 521
VneI GTGCAC 1 cut(s) 550
VpaK11BI GGWCC 5 cut(s) 311, 449, 1084, 1516, 2068
XagI CCTNNNNNAGG 2 cut(s) 103, 2186
XapI RAATTY 3 cut(s) 241, 955, 1546
XceI RCATGY 1 cut(s) 191
XmaJI CCTAGG 1 cut(s) 203
XmiI GTMKAC 1 cut(s) 123
XmnI GAANNNNTTC 1 cut(s) 1026
XspI CTAG 6 cut(s) 204, 465, 680, 687, 1115, 2027
Zsp2I ATGCAT 1 cut(s) 1902
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.