Rh7CG000100

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0013265
Physical Location & Seq
Reverse (-)
44019 .. 53948
9930 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG000100.1

Sequence Viewer

Length: 2079 bp
ATGCGAGTGAAGAAGATGCACCCACTATGCTATATAACGATCGAGAATGGCGTTATAGGCTACCAGTCACCAGAGGCATCGTCACTGTCGAGGACTCGGAGCTTGCCGCCTCTTGATGGTTTGTTAGGGAGCCCAGCTGCAAGTTCAGCTGGACCTTCTTTGCCTCTATCACATACTGCGACAACACCTGCAACCAATGCTACTTTCAACTCAAGTAAACAAGCAGTCCCCTGTATCTTCTTTCAAAGGGGATTTTGTTCAAAAGCTGATAAATGCCCCTTCTCACATGGACCAAATCCTATTACTAGTAGTAAAGTTCCACAGGCCCCAGCAGCTACCCATGGTACAGAACCTTCAAGTCTTAAGAAGATTTTTGGTGGCATTCAGAAATGCACTCAAGAGATGAAGATTCCTCAGGTAAGTGCCTCAAAGATTGTTGGAGTGCCTCCTCAATCCAAACCTGCTCCAAAGGTTGAAACTGCACCACCACGAAATGGAGTTGGCATTGAGAGGAATGTACTAGTAACTAGAGACTTTGACGATGAGGCTCTTAGATACAAGGCAAGAAGTGTTTTGCCTGCTATGAATGGAGACTCTACAGGTCAGGCCAATCATTTTCTTCAGGCTCATGTATCAGAAAATCATGGTTTCCAAAATGGCAAGGATGTTGATGAGCATTTGAGGGAGTCTTCTCCTGGATTTGATGTTCTTGTAGATGATGAACTTGGAGATTCTGATTACTACCATGGTGAAGAACAATTTGGAATAAAAAGAGGTCATGACGGAAGGAACTTGAATTCTGTGAATGAGTATGATTTGGACTGTCCTACTGATTACAATTCAATTGCTGATGGTGATCGAGAAAGGTTTCGTGACCCACGAGGTTATGGCCCATATGATCAGATGCAAGGGAGATATGCTTGGGACCAGCACAGGGCTTCATCTGAGAGACTTCTAGTGGGCTCTGCTCATTCGGAGAGGAGGGGTTATCGTAAATCTGATAGTCCAGATAACATTGATGGGTCAGATCTGCGACATCGTTTGTCCAAACATAGGAGGGGAAATGGTCTGAGATCCATCATCAGCAATGACTACGATGGCCATGTTGAGGAGCGAAAAAGCCGTCCTCGTAGGGATTCACAGCAATTGCCCTCACATGAGGGCTCCCTCAGCAGTCGTCTTCGTGGTAGAATAAAGCTTCCAGGTGGATCTTCTCCAGTCAATAGTAGTGACTTGCACCAAGAGAGGGAAGCTGACAGAGGAAGGAGTCGTGACAGAAGTCGCGATGGATTATCACCCAGAAGGCCTCAAATTATGTCCCACCAAGGAAGGCTTCGAGACAGAATACAAGGAAGGGTCCAAGAGGACTATAATAATGAGGTTAGAAATTTCGGGGTTCCTCGTATGAGGAGAGAGATAGTGGATGAAAGAAGCACAGAGTTTTCTCATCCAAAACGTCTCTCAGAGCTGAAAGGTGGGGTAGATGCAGAAATTAGGGAGCATTCTTACCTTGGAAAACCAAATAATGTGAAGATGGATAATAATCAGCTATCTGAAGGTGATCTCTCATTTGAAGGGCCAAAGCCTCTTAGCGAGATTCTGAAGAGGAAGAGAGAAGCTGAAGCAGCTGCAGCTTCTGGGAGCAGGAAAAGATCTTCTGTTAATAAACAACGCAACAATGAGAAAGAAGGCCCGGTGAGAAATCCAGGTGGCTCCGAGACAGGAGCTATTACAATGATGCATAACAGTCAGTCCCCTGTGGCCAAAGAAGAGACAAAGTCTGCAACCACTGATGCAGTTGGAGCTGAAAATGAAAAAATTGATGTGGCTCCTGGCCAGTCTTCTGAAGGACATAATGATGGCGAGCTAGAGACTGAAGATGGTCTGATATATGATGAAACACTTGAGGACCACGAGCTTGACGGTGAAGATCAGAGGGAAGGGGAATATGATTATGAGCAAGGAGAGGATGGTGAATATACTTACGAAGAAGGTGAAAATGCAGATGCTGAAGAGGAATACCTGGAGGAGGAAGACGGGGATGACTTTGCTAAGAAGATTGGTGTCATGTTCTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CCCH_2 zf-CCCH_3

Protein Analysis

692

Amino Acids

76.79

Weight (kDa)

5.6

Isoelectric Point (pI)

57.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013265)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G02160
fragaria_vesca FvH4_5g18690 FvH4_5g18690
malus_domestica MD16G1008200.v1.1
prunus_persica Prupe.1G342700_v2.0.a1
pyrus_communis pycom13g00840 pycom16g00800 pycom16g00810
rosa_chinensis RchiOBHm_Chr7g0176801
rosa_laevigata RLG00000005584
rosa_multiflora Rmu_sc0005162.1_g000002
rosa_roxburghii Rroxscaffold_3G00276400
rosa_rugosa Rorug06G0401100
rosa_samantha Rh7AG000100 Rh7BG000300 Rh7CG000100 Rh7DG000400
rosa_wichuraiana Rw7G000010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 196
Acc36I ACCTGC 2 cut(s) 196, 469
AccB7I CCANNNNNTGG 1 cut(s) 494
AccII CGCG 1 cut(s) 1284
AciI CCGC 1 cut(s) 107
AclWI GGATC 2 cut(s) 1068, 1216
AcoI YGGCCR 3 cut(s) 1099, 1761, 1834
AcsI RAATTY 2 cut(s) 796, 1387
AcuI CTGAAG 7 cut(s) 605, 1575, 1622, 1641, 1866, 1896, 2031
AfaI GTAC 2 cut(s) 346, 519
AfiI CCNNNNNNNGG 7 cut(s) 116, 494, 934, 1053, 1108, 1246, 2029
AflII CTTAAG 1 cut(s) 362
AgsI TTSAA 8 cut(s) 208, 245, 261, 357, 476, 796, 843, 1574
AhlI ACTAGT 2 cut(s) 305, 520
AjnI CCWGG 5 cut(s) 694, 1201, 1705, 1831, 2022
AjuI GAANNNNNNNTTGG 6 cut(s) 188, 220, 744, 776, 1317, 1349
AloI GAACNNNNNNTCC 2 cut(s) 690, 722
Alw26I GTCTC 8 cut(s) 525, 585, 943, 1332, 1463, 1712, 1766, 1865
AlwI GGATC 2 cut(s) 1068, 1216
AlwNI CAGNNNCTG 2 cut(s) 1637, 2009
AoxI GGCC 9 cut(s) 324, 606, 889, 1099, 1304, 1577, 1690, 1761, 1834
ApeKI GCWGC 5 cut(s) 137, 332, 1625, 1628, 1631
ApoI RAATTY 2 cut(s) 796, 1387
ArsI GACNNNNNNTTYG 2 cut(s) 1108, 1140
Asp700I GAANNNNTTC 1 cut(s) 867
AspS9I GGNCC 9 cut(s) 152, 290, 325, 890, 925, 1357, 1577, 1691, 1909
AsuC2I CCSGG 1 cut(s) 1694
AsuHPI GGTGA 9 cut(s) 60, 761, 866, 1287, 1571, 1708, 1937, 1985, 2006
AvaII GGWCC 5 cut(s) 152, 290, 925, 1357, 1909
AxyI CCTNAGG 1 cut(s) 414
BalI TGGCCA 3 cut(s) 1101, 1763, 1836
BanII GRGCYC 3 cut(s) 134, 965, 1166
BarI GAAGNNNNNNTAC 2 cut(s) 337, 369
BauI CACGAG 2 cut(s) 879, 1913
BbsI GAAGAC 4 cut(s) 681, 1172, 1833, 2040
BbvCI CCTCAGC 1 cut(s) 1169
BbvI GCAGC 5 cut(s) 124, 344, 1615, 1637, 1643
BceAI ACGGC 1 cut(s) 1107
BciT130I CCWGG 5 cut(s) 696, 1203, 1707, 1833, 2024
BclI TGATCA 1 cut(s) 898
BcnI CCSGG 1 cut(s) 1694
BcoDI GTCTC 8 cut(s) 525, 585, 943, 1332, 1463, 1712, 1766, 1865
BcuI ACTAGT 2 cut(s) 305, 520
BfaI CTAG 5 cut(s) 306, 521, 528, 956, 1868
BfmI CTRYAG 2 cut(s) 597, 1629
BfrI CTTAAG 1 cut(s) 362
BfuAI ACCTGC 2 cut(s) 196, 469
BglII AGATCT 2 cut(s) 1027, 1652
BisI GCNGC 6 cut(s) 107, 138, 333, 1626, 1629, 1632
BlsI GCNGC 6 cut(s) 108, 139, 334, 1627, 1630, 1633
Bme1390I CCNGG 6 cut(s) 696, 1203, 1694, 1707, 1833, 2024
Bme18I GGWCC 5 cut(s) 152, 290, 925, 1357, 1909
BmgT120I GGNCC 9 cut(s) 152, 290, 325, 890, 925, 1357, 1577, 1691, 1909
BmiI GGNNCC 8 cut(s) 131, 327, 926, 1165, 1358, 1398, 1714, 1830
BmrFI CCNGG 6 cut(s) 696, 1203, 1694, 1707, 1833, 2024
BmsI GCATC 7 cut(s) 6, 86, 894, 1474, 1728, 1783, 1996
BoxI GACNNNNGTC 1 cut(s) 1278
BpiI GAAGAC 4 cut(s) 681, 1172, 1833, 2040
BpmI CTGGAG 2 cut(s) 1200, 2045
Bpu10I CCTNAGC 1 cut(s) 1169
BpuEI CTTGAG 3 cut(s) 196, 381, 1925
BpuMI CCSGG 1 cut(s) 1694
BsaBI GATNNNNATC 2 cut(s) 855, 1542
BsaJI CCNNGG 4 cut(s) 340, 745, 1324, 1510
Bsc4I CCNNNNNNNGG 7 cut(s) 116, 494, 934, 1053, 1108, 1246, 2029
Bse1I ACTGG 3 cut(s) 64, 1217, 1837
Bse21I CCTNAGG 1 cut(s) 414
Bse3DI GCAATG 1 cut(s) 1093
Bse8I GATNNNNATC 2 cut(s) 855, 1542
BseBI CCWGG 5 cut(s) 696, 1203, 1707, 1833, 2024
BseDI CCNNGG 4 cut(s) 340, 745, 1324, 1510
BseGI GGATG 5 cut(s) 670, 1429, 1447, 1975, 2047
BseJI GATNNNNATC 2 cut(s) 855, 1542
BseLI CCNNNNNNNGG 7 cut(s) 116, 494, 934, 1053, 1108, 1246, 2029
BseMI GCAATG 1 cut(s) 1093
BseMII CTCAG 5 cut(s) 428, 936, 1061, 1183, 1476
BseNI ACTGG 3 cut(s) 64, 1217, 1837
BseRI GAGGAG 5 cut(s) 438, 994, 1124, 1423, 2042
BseXI GCAGC 5 cut(s) 124, 344, 1615, 1637, 1643
BseYI CCCAGC 2 cut(s) 133, 328
BsgI GTGCAG 1 cut(s) 465
Bsh1236I CGCG 1 cut(s) 1284
Bsh1285I CGRYCG 1 cut(s) 42
BshFI GGCC 9 cut(s) 326, 608, 891, 1101, 1306, 1579, 1692, 1763, 1836
BsiEI CGRYCG 1 cut(s) 42
BsiSI CCGG 1 cut(s) 1694
BslFI GGGAC 4 cut(s) 212, 938, 1303, 1738
BslI CCNNNNNNNGG 7 cut(s) 116, 494, 934, 1053, 1108, 1246, 2029
BsmAI GTCTC 8 cut(s) 525, 585, 943, 1332, 1463, 1712, 1766, 1865
BsmBI CGTCTC 1 cut(s) 1463
BsmFI GGGAC 4 cut(s) 212, 938, 1303, 1738
BsmI GAATGC 2 cut(s) 381, 1501
BsnI GGCC 9 cut(s) 326, 608, 891, 1101, 1306, 1579, 1692, 1763, 1836
Bsp1286I GDGCHC 3 cut(s) 134, 965, 1166
Bsp143I GATC 9 cut(s) 39, 856, 898, 1027, 1073, 1208, 1561, 1652, 1930
Bsp19I CCATGG 2 cut(s) 340, 745
Bsp68I TCGCGA 1 cut(s) 1284
BspACI CCGC 1 cut(s) 107
BspANI GGCC 9 cut(s) 326, 608, 891, 1101, 1306, 1579, 1692, 1763, 1836
BspCNI CTCAG 5 cut(s) 427, 937, 1062, 1182, 1475
BspFNI CGCG 1 cut(s) 1284
BspHI TCATGA 1 cut(s) 778
BspLI GGNNCC 8 cut(s) 131, 327, 926, 1165, 1358, 1398, 1714, 1830
BspMAI CTGCAG 1 cut(s) 1633
BspMI ACCTGC 2 cut(s) 196, 469
BspPI GGATC 2 cut(s) 1068, 1216
BspTI CTTAAG 1 cut(s) 362
BsrDI GCAATG 1 cut(s) 1093
BsrI ACTGG 3 cut(s) 64, 1217, 1837
BssECI CCNNGG 4 cut(s) 340, 745, 1324, 1510
BssMI GATC 9 cut(s) 39, 856, 898, 1027, 1073, 1208, 1561, 1652, 1930
BssSI CACGAG 2 cut(s) 879, 1913
BssT1I CCWWGG 4 cut(s) 340, 745, 1324, 1510
Bst2BI CACGAG 2 cut(s) 879, 1913
Bst2UI CCWGG 5 cut(s) 696, 1203, 1707, 1833, 2024
Bst4CI ACNGT 4 cut(s) 87, 824, 1748, 1925
Bst6I CTCTTC 4 cut(s) 1598, 1604, 1764, 2007
BstAFI CTTAAG 1 cut(s) 362
BstAPI GCANNNNNTGC 1 cut(s) 197
BstC8I GCNNGC 3 cut(s) 104, 579, 1865
BstDEI CTNAG 8 cut(s) 414, 551, 945, 1070, 1169, 1462, 1589, 2052
BstDSI CCRYGG 2 cut(s) 340, 745
BstENI CCTNNNNNAGG 1 cut(s) 2027
BstF5I GGATG 5 cut(s) 670, 1429, 1447, 1975, 2047
BstFNI CGCG 1 cut(s) 1284
BstKTI GATC 9 cut(s) 42, 859, 901, 1030, 1076, 1211, 1564, 1655, 1933
BstMAI GTCTC 8 cut(s) 525, 585, 943, 1332, 1463, 1712, 1766, 1865
BstMBI GATC 9 cut(s) 39, 856, 898, 1027, 1073, 1208, 1561, 1652, 1930
BstMCI CGRYCG 1 cut(s) 42
BstMWI GCNNNNNNNGC 8 cut(s) 57, 146, 197, 332, 1170, 1625, 1631, 1802
BstNI CCWGG 5 cut(s) 696, 1203, 1707, 1833, 2024
BstPAI GACNNNNGTC 1 cut(s) 1278
BstSCI CCNGG 6 cut(s) 694, 1201, 1692, 1705, 1831, 2022
BstSFI CTRYAG 2 cut(s) 597, 1629
BstUI CGCG 1 cut(s) 1284
BstV1I GCAGC 5 cut(s) 124, 344, 1615, 1637, 1643
BstV2I GAAGAC 4 cut(s) 681, 1172, 1833, 2040
BstX2I RGATCY 4 cut(s) 1027, 1073, 1208, 1652
BstYI RGATCY 4 cut(s) 1027, 1073, 1208, 1652
Bsu36I CCTNAGG 1 cut(s) 414
BsuRI GGCC 9 cut(s) 326, 608, 891, 1101, 1306, 1579, 1692, 1763, 1836
BtgI CCRYGG 2 cut(s) 340, 745
BtgZI GCGATG 1 cut(s) 1299
BtsCI GGATG 5 cut(s) 670, 1429, 1447, 1975, 2047
BtsIMutI CAGTG 2 cut(s) 83, 1788
BtuMI TCGCGA 1 cut(s) 1284
BveI ACCTGC 2 cut(s) 196, 469
Cac8I GCNNGC 3 cut(s) 104, 579, 1865
CaiI CAGNNNCTG 2 cut(s) 1637, 2009
CciI TCATGA 1 cut(s) 778
Cfr13I GGNCC 9 cut(s) 152, 290, 325, 890, 925, 1357, 1577, 1691, 1909
Csp6I GTAC 2 cut(s) 345, 518
CviAII CATG 9 cut(s) 287, 341, 629, 644, 746, 779, 1103, 1157, 2068
CviQI GTAC 2 cut(s) 345, 518
DdeI CTNAG 8 cut(s) 414, 551, 945, 1070, 1169, 1462, 1589, 2052
DpnI GATC 9 cut(s) 41, 858, 900, 1029, 1075, 1210, 1563, 1654, 1932
DpnII GATC 9 cut(s) 39, 856, 898, 1027, 1073, 1208, 1561, 1652, 1930
EaeI YGGCCR 3 cut(s) 1099, 1761, 1834
Eam1104I CTCTTC 4 cut(s) 1598, 1604, 1764, 2007
EarI CTCTTC 4 cut(s) 1598, 1604, 1764, 2007
Eco130I CCWWGG 4 cut(s) 340, 745, 1324, 1510
Eco147I AGGCCT 1 cut(s) 1306
Eco24I GRGCYC 3 cut(s) 134, 965, 1166
Eco47I GGWCC 5 cut(s) 152, 290, 925, 1357, 1909
Eco57I CTGAAG 7 cut(s) 605, 1575, 1622, 1641, 1866, 1896, 2031
Eco81I CCTNAGG 1 cut(s) 414
EcoNI CCTNNNNNAGG 1 cut(s) 2027
EcoO109I RGGNCCY 1 cut(s) 325
EcoRI GAATTC 1 cut(s) 796
EcoRII CCWGG 5 cut(s) 694, 1201, 1705, 1831, 2022
EcoT14I CCWWGG 4 cut(s) 340, 745, 1324, 1510
EcoT22I ATGCAT 1 cut(s) 1743
EcoT38I GRGCYC 3 cut(s) 134, 965, 1166
ErhI CCWWGG 4 cut(s) 340, 745, 1324, 1510
Esp3I CGTCTC 1 cut(s) 1463
FaeI CATG 9 cut(s) 290, 344, 632, 647, 749, 782, 1106, 1160, 2071
FalI AAGNNNNNCTT 2 cut(s) 1317, 1349
FaqI GGGAC 4 cut(s) 212, 938, 1303, 1738
FatI CATG 9 cut(s) 286, 340, 628, 643, 745, 778, 1102, 1156, 2067
FauNDI CATATG 1 cut(s) 895
FbaI TGATCA 1 cut(s) 898
Fnu4HI GCNGC 6 cut(s) 107, 138, 333, 1626, 1629, 1632
FokI GGATG 5 cut(s) 677, 1434, 1436, 1982, 2054
FriOI GRGCYC 3 cut(s) 134, 965, 1166
Fsp4HI GCNGC 6 cut(s) 107, 138, 333, 1626, 1629, 1632
FspBI CTAG 5 cut(s) 306, 521, 528, 956, 1868
GluI GCNGC 6 cut(s) 107, 138, 333, 1626, 1629, 1632
GsaI CCCAGC 2 cut(s) 137, 332
GsuI CTGGAG 2 cut(s) 1200, 2045
HaeIII GGCC 9 cut(s) 326, 608, 891, 1101, 1306, 1579, 1692, 1763, 1836
HapII CCGG 1 cut(s) 1694
Hin1II CATG 9 cut(s) 290, 344, 632, 647, 749, 782, 1106, 1160, 2071
HindIII AAGCTT 1 cut(s) 1196
HinfI GANTC 8 cut(s) 94, 409, 593, 686, 731, 1136, 1267, 1597
HpaII CCGG 1 cut(s) 1694
HphI GGTGA 9 cut(s) 60, 761, 866, 1287, 1571, 1708, 1937, 1985, 2006
Hpy166II GTNNAC 1 cut(s) 218
Hpy8I GTNNAC 1 cut(s) 218
HpyCH4III ACNGT 4 cut(s) 87, 824, 1748, 1925
HpyCH4IV ACGT 1 cut(s) 1456
HpyF10VI GCNNNNNNNGC 8 cut(s) 57, 146, 197, 332, 1170, 1625, 1631, 1802
HpyF3I CTNAG 8 cut(s) 414, 551, 945, 1070, 1169, 1462, 1589, 2052
HpySE526I ACGT 1 cut(s) 1456
Hsp92II CATG 9 cut(s) 290, 344, 632, 647, 749, 782, 1106, 1160, 2071
Ksp22I TGATCA 1 cut(s) 898
Kzo9I GATC 9 cut(s) 39, 856, 898, 1027, 1073, 1208, 1561, 1652, 1930
Lsp1109I GCAGC 5 cut(s) 124, 344, 1615, 1637, 1643
LweI GCATC 7 cut(s) 6, 86, 894, 1474, 1728, 1783, 1996
MaeI CTAG 5 cut(s) 306, 521, 528, 956, 1868
MaeII ACGT 1 cut(s) 1456
MaeIII GTNAC 6 cut(s) 66, 81, 523, 872, 1229, 1271
MalI GATC 9 cut(s) 41, 858, 900, 1029, 1075, 1210, 1563, 1654, 1932
MboI GATC 9 cut(s) 39, 856, 898, 1027, 1073, 1208, 1561, 1652, 1930
MfeI CAATTG 2 cut(s) 843, 1145
MflI RGATCY 4 cut(s) 1027, 1073, 1208, 1652
MhlI GDGCHC 3 cut(s) 134, 965, 1166
MlsI TGGCCA 3 cut(s) 1101, 1763, 1836
MluCI AATT 9 cut(s) 758, 796, 838, 843, 1145, 1311, 1387, 1491, 1818
MluNI TGGCCA 3 cut(s) 1101, 1763, 1836
MlyI GAGTC 4 cut(s) 88, 587, 695, 1276
MmeI TCCRAC 2 cut(s) 418, 1780
Mox20I TGGCCA 3 cut(s) 1101, 1763, 1836
Mph1103I ATGCAT 1 cut(s) 1743
MroXI GAANNNNTTC 1 cut(s) 867
MscI TGGCCA 3 cut(s) 1101, 1763, 1836
MseI TTAA 2 cut(s) 363, 1662
MslI CAYNNNNRTG 1 cut(s) 1857
Msp20I TGGCCA 3 cut(s) 1101, 1763, 1836
MspA1I CMGCKG 3 cut(s) 137, 149, 1628
MspCI CTTAAG 1 cut(s) 362
MspI CCGG 1 cut(s) 1694
MspR9I CCNGG 6 cut(s) 696, 1203, 1694, 1707, 1833, 2024
MunI CAATTG 2 cut(s) 843, 1145
Mva1269I GAATGC 2 cut(s) 381, 1501
MvaI CCWGG 5 cut(s) 696, 1203, 1707, 1833, 2024
MvnI CGCG 1 cut(s) 1284
MwoI GCNNNNNNNGC 8 cut(s) 57, 146, 197, 332, 1170, 1625, 1631, 1802
NciI CCSGG 1 cut(s) 1694
NcoI CCATGG 2 cut(s) 340, 745
NdeI CATATG 1 cut(s) 895
NdeII GATC 9 cut(s) 39, 856, 898, 1027, 1073, 1208, 1561, 1652, 1930
NlaIII CATG 9 cut(s) 290, 344, 632, 647, 749, 782, 1106, 1160, 2071
NlaIV GGNNCC 8 cut(s) 131, 327, 926, 1165, 1358, 1398, 1714, 1830
NmuCI GTSAC 5 cut(s) 66, 81, 872, 1229, 1271
NruI TCGCGA 1 cut(s) 1284
NsiI ATGCAT 1 cut(s) 1743
PagI TCATGA 1 cut(s) 778
PaqCI CACCTGC 1 cut(s) 196
PceI AGGCCT 1 cut(s) 1306
PcsI WCGNNNNNNNCGW 3 cut(s) 48, 86, 877
PctI GAATGC 2 cut(s) 381, 1501
PdmI GAANNNNTTC 1 cut(s) 867
PfeI GAWTC 4 cut(s) 409, 731, 1136, 1597
PflFI GACNNNGTC 1 cut(s) 1777
PflMI CCANNNNNTGG 1 cut(s) 494
PfoI TCCNGGA 1 cut(s) 694
PkrI GCNGC 6 cut(s) 108, 139, 334, 1627, 1630, 1633
Ple19I CGATCG 1 cut(s) 42
PleI GAGTC 4 cut(s) 88, 587, 694, 1275
PpsI GAGTC 4 cut(s) 88, 587, 694, 1275
PshAI GACNNNNGTC 1 cut(s) 1278
Psp6I CCWGG 5 cut(s) 694, 1201, 1705, 1831, 2022
PspFI CCCAGC 2 cut(s) 133, 328
PspGI CCWGG 5 cut(s) 694, 1201, 1705, 1831, 2022
PspN4I GGNNCC 8 cut(s) 131, 327, 926, 1165, 1358, 1398, 1714, 1830
PspPI GGNCC 9 cut(s) 152, 290, 325, 890, 925, 1357, 1577, 1691, 1909
PstI CTGCAG 1 cut(s) 1633
PstNI CAGNNNCTG 2 cut(s) 1637, 2009
PsuI RGATCY 4 cut(s) 1027, 1073, 1208, 1652
PsyI GACNNNGTC 1 cut(s) 1777
PvuI CGATCG 1 cut(s) 42
PvuII CAGCTG 3 cut(s) 137, 149, 1628
RruI TCGCGA 1 cut(s) 1284
RsaI GTAC 2 cut(s) 346, 519
RsaNI GTAC 2 cut(s) 345, 518
RseI CAYNNNNRTG 1 cut(s) 1857
SaqAI TTAA 2 cut(s) 363, 1662
SatI GCNGC 6 cut(s) 107, 138, 333, 1626, 1629, 1632
Sau3AI GATC 9 cut(s) 39, 856, 898, 1027, 1073, 1208, 1561, 1652, 1930
Sau96I GGNCC 9 cut(s) 152, 290, 325, 890, 925, 1357, 1577, 1691, 1909
SchI GAGTC 4 cut(s) 88, 587, 695, 1276
ScrFI CCNGG 6 cut(s) 696, 1203, 1694, 1707, 1833, 2024
SduI GDGCHC 3 cut(s) 134, 965, 1166
SfaNI GCATC 7 cut(s) 6, 86, 894, 1474, 1728, 1783, 1996
SfcI CTRYAG 2 cut(s) 597, 1629
SinI GGWCC 5 cut(s) 152, 290, 925, 1357, 1909
SmiMI CAYNNNNRTG 1 cut(s) 1857
SmlI CTYRAG 4 cut(s) 211, 362, 396, 1904
SmoI CTYRAG 4 cut(s) 211, 362, 396, 1904
SpeI ACTAGT 2 cut(s) 305, 520
Sse9I AATT 9 cut(s) 758, 796, 838, 843, 1145, 1311, 1387, 1491, 1818
SseBI AGGCCT 1 cut(s) 1306
SsiI CCGC 1 cut(s) 107
SspMI CTAG 5 cut(s) 306, 521, 528, 956, 1868
StuI AGGCCT 1 cut(s) 1306
StyD4I CCNGG 6 cut(s) 694, 1201, 1692, 1705, 1831, 2022
StyI CCWWGG 4 cut(s) 340, 745, 1324, 1510
TaaI ACNGT 4 cut(s) 87, 824, 1748, 1925
TaiI ACGT 1 cut(s) 1459
TaqI TCGA 4 cut(s) 42, 89, 859, 1336
TasI AATT 9 cut(s) 758, 796, 838, 843, 1145, 1311, 1387, 1491, 1818
TatI WGTACW 1 cut(s) 517
TauI GCSGC 1 cut(s) 109
TfiI GAWTC 4 cut(s) 409, 731, 1136, 1597
Tru1I TTAA 2 cut(s) 363, 1662
Tru9I TTAA 2 cut(s) 363, 1662
TscAI CASTG 2 cut(s) 90, 1795
TseFI GTSAC 5 cut(s) 66, 81, 872, 1229, 1271
TseI GCWGC 5 cut(s) 137, 332, 1625, 1628, 1631
Tsp45I GTSAC 5 cut(s) 66, 81, 872, 1229, 1271
TspDTI ATGAA 7 cut(s) 419, 599, 735, 930, 1440, 1827, 1911
TspGWI ACGGA 1 cut(s) 798
TspRI CASTG 2 cut(s) 90, 1795
Tth111I GACNNNGTC 1 cut(s) 1777
Van91I CCANNNNNTGG 1 cut(s) 494
Vha464I CTTAAG 1 cut(s) 362
VpaK11BI GGWCC 5 cut(s) 152, 290, 925, 1357, 1909
XagI CCTNNNNNAGG 1 cut(s) 2027
XapI RAATTY 2 cut(s) 796, 1387
XmnI GAANNNNTTC 1 cut(s) 867
XspI CTAG 5 cut(s) 306, 521, 528, 956, 1868
Zsp2I ATGCAT 1 cut(s) 1743
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.