Protein SHOOT GRAVITROPISM
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G25250 AT1G25250 AT1G25250 AT1G68130 AT1G68130 |
| fragaria_vesca | FvH4_5g17840 |
| malus_domestica | MD06G1234600.v1.1 MD13G1015000.v1.1 MD14G1241600.v1.1 MD16G1012300.v1.1 |
| prunus_persica | Prupe.1G338700_v2.0.a1 Prupe.5G239100_v2.0.a1 |
| pyrus_communis | pycom06g20930 pycom13g01270 pycom14g20290 pycom16g01170 |
| rosa_chinensis | RchiOBHm_Chr7g0177741 |
| rosa_laevigata | RLG00000005509 |
| rosa_multiflora | Rmu_sc0004786.1_g000006 |
| rosa_roxburghii | Rroxscaffold_3G00275600 |
| rosa_rugosa | Rorug06G0409000 Rorug06G0409100 |
| rosa_samantha | Rh7AG008500 Rh7BG008500 Rh7CG008900 Rh7DG008600 |
| rosa_wichuraiana | Rw7G000710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 263 |
| AccB1I | GGYRCC | 2 cut(s) | 22, 260 |
| AccII | CGCG | 3 cut(s) | 400, 629, 893 |
| AclWI | GGATC | 1 cut(s) | 971 |
| AcoI | YGGCCR | 3 cut(s) | 286, 831, 870 |
| AcsI | RAATTY | 1 cut(s) | 649 |
| AcuI | CTGAAG | 5 cut(s) | 59, 145, 590, 698, 884 |
| AcvI | CACGTG | 1 cut(s) | 349 |
| AcyI | GRCGYC | 1 cut(s) | 900 |
| AdeI | CACNNNGTG | 1 cut(s) | 22 |
| AfaI | GTAC | 1 cut(s) | 415 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 349 |
| AflIII | ACRYGT | 2 cut(s) | 346, 1170 |
| AgsI | TTSAA | 2 cut(s) | 300, 841 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 350 |
| AjnI | CCWGG | 3 cut(s) | 778, 833, 1155 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 786, 818 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 594, 626 |
| Alw21I | GWGCWC | 3 cut(s) | 209, 324, 1123 |
| Alw26I | GTCTC | 1 cut(s) | 1142 |
| AlwI | GGATC | 1 cut(s) | 971 |
| AoxI | GGCC | 5 cut(s) | 286, 387, 815, 831, 870 |
| ApaI | GGGCCC | 1 cut(s) | 819 |
| ApeKI | GCWGC | 9 cut(s) | 34, 102, 371, 461, 562, 565, 568, 970, 1094 |
| ApoI | RAATTY | 1 cut(s) | 649 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1042, 1074 |
| AspLEI | GCGC | 1 cut(s) | 631 |
| AspS9I | GGNCC | 5 cut(s) | 352, 693, 815, 816, 1136 |
| AsuC2I | CCSGG | 4 cut(s) | 92, 290, 488, 904 |
| AsuHPI | GGTGA | 2 cut(s) | 76, 794 |
| AsuNHI | GCTAGC | 1 cut(s) | 49 |
| AvaII | GGWCC | 3 cut(s) | 352, 693, 1136 |
| BaeGI | GKGCMC | 2 cut(s) | 92, 819 |
| BalI | TGGCCA | 1 cut(s) | 833 |
| BanI | GGYRCC | 2 cut(s) | 22, 260 |
| BanII | GRGCYC | 2 cut(s) | 99, 819 |
| BbrPI | CACGTG | 1 cut(s) | 349 |
| BbsI | GAAGAC | 1 cut(s) | 903 |
| Bbv12I | GWGCWC | 3 cut(s) | 209, 324, 1123 |
| BbvCI | CCTCAGC | 1 cut(s) | 984 |
| BbvI | GCAGC | 9 cut(s) | 21, 89, 383, 473, 574, 577, 580, 982, 1081 |
| BccI | CCATC | 2 cut(s) | 519, 925 |
| BceAI | ACGGC | 4 cut(s) | 10, 206, 857, 935 |
| BciT130I | CCWGG | 3 cut(s) | 780, 835, 1157 |
| BclI | TGATCA | 3 cut(s) | 66, 706, 1207 |
| BcnI | CCSGG | 4 cut(s) | 92, 290, 488, 904 |
| BcoDI | GTCTC | 1 cut(s) | 1142 |
| BfaI | CTAG | 1 cut(s) | 50 |
| BfuAI | ACCTGC | 1 cut(s) | 263 |
| Bme1390I | CCNGG | 7 cut(s) | 92, 290, 488, 780, 835, 904, 1157 |
| Bme18I | GGWCC | 3 cut(s) | 352, 693, 1136 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 350 |
| BmgT120I | GGNCC | 5 cut(s) | 352, 693, 815, 816, 1136 |
| BmiI | GGNNCC | 8 cut(s) | 24, 96, 262, 694, 695, 817, 1137, 1138 |
| BmrFI | CCNGG | 7 cut(s) | 92, 290, 488, 780, 835, 904, 1157 |
| BmrI | ACTGGG | 1 cut(s) | 1133 |
| BmsI | GCATC | 2 cut(s) | 416, 830 |
| BmtI | GCTAGC | 1 cut(s) | 53 |
| BmuI | ACTGGG | 1 cut(s) | 1133 |
| BpiI | GAAGAC | 1 cut(s) | 903 |
| BpmI | CTGGAG | 3 cut(s) | 409, 450, 762 |
| Bpu10I | CCTNAGC | 1 cut(s) | 984 |
| BpuMI | CCSGG | 4 cut(s) | 92, 290, 488, 904 |
| BsaAI | YACGTR | 1 cut(s) | 349 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1206 |
| BsaHI | GRCGYC | 1 cut(s) | 900 |
| BsaJI | CCNNGG | 4 cut(s) | 26, 130, 873, 1155 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 349 |
| Bse118I | RCCGGY | 1 cut(s) | 382 |
| Bse1I | ACTGG | 3 cut(s) | 426, 467, 1128 |
| Bse3DI | GCAATG | 1 cut(s) | 1083 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1206 |
| BseBI | CCWGG | 3 cut(s) | 780, 835, 1157 |
| BseDI | CCNNGG | 4 cut(s) | 26, 130, 873, 1155 |
| BseGI | GGATG | 2 cut(s) | 832, 1151 |
| BseJI | GATNNNNATC | 1 cut(s) | 1206 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 349 |
| BseMI | GCAATG | 1 cut(s) | 1083 |
| BseMII | CTCAG | 2 cut(s) | 975, 1013 |
| BseNI | ACTGG | 3 cut(s) | 426, 467, 1128 |
| BseRI | GAGGAG | 5 cut(s) | 822, 872, 1128, 1131, 1143 |
| BseSI | GKGCMC | 2 cut(s) | 92, 819 |
| BseX3I | CGGCCG | 1 cut(s) | 286 |
| BseXI | GCAGC | 9 cut(s) | 21, 89, 383, 473, 574, 577, 580, 982, 1081 |
| BseYI | CCCAGC | 1 cut(s) | 98 |
| Bsh1236I | CGCG | 3 cut(s) | 400, 629, 893 |
| Bsh1285I | CGRYCG | 1 cut(s) | 289 |
| BshFI | GGCC | 5 cut(s) | 288, 389, 817, 833, 872 |
| BshNI | GGYRCC | 2 cut(s) | 22, 260 |
| BsiEI | CGRYCG | 1 cut(s) | 289 |
| BsiHKAI | GWGCWC | 3 cut(s) | 209, 324, 1123 |
| BsiSI | CCGG | 5 cut(s) | 92, 289, 383, 488, 904 |
| BslFI | GGGAC | 2 cut(s) | 679, 1149 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 349 |
| BsmAI | GTCTC | 1 cut(s) | 1142 |
| BsmFI | GGGAC | 2 cut(s) | 679, 1149 |
| BsmI | GAATGC | 1 cut(s) | 541 |
| BsnI | GGCC | 5 cut(s) | 288, 389, 817, 833, 872 |
| Bsp120I | GGGCCC | 1 cut(s) | 815 |
| Bsp1286I | GDGCHC | 6 cut(s) | 92, 99, 209, 324, 819, 1123 |
| Bsp143I | GATC | 9 cut(s) | 58, 66, 136, 517, 706, 939, 963, 1201, 1207 |
| Bsp68I | TCGCGA | 1 cut(s) | 400 |
| BspANI | GGCC | 5 cut(s) | 288, 389, 817, 833, 872 |
| BspCNI | CTCAG | 2 cut(s) | 976, 1012 |
| BspFNI | CGCG | 3 cut(s) | 400, 629, 893 |
| BspHI | TCATGA | 1 cut(s) | 1204 |
| BspLI | GGNNCC | 8 cut(s) | 24, 96, 262, 694, 695, 817, 1137, 1138 |
| BspMI | ACCTGC | 1 cut(s) | 263 |
| BspOI | GCTAGC | 1 cut(s) | 53 |
| BspPI | GGATC | 1 cut(s) | 971 |
| BspT107I | GGYRCC | 2 cut(s) | 22, 260 |
| BsrDI | GCAATG | 1 cut(s) | 1083 |
| BsrFI | RCCGGY | 1 cut(s) | 382 |
| BsrI | ACTGG | 3 cut(s) | 426, 467, 1128 |
| BssAI | RCCGGY | 1 cut(s) | 382 |
| BssECI | CCNNGG | 4 cut(s) | 26, 130, 873, 1155 |
| BssMI | GATC | 9 cut(s) | 58, 66, 136, 517, 706, 939, 963, 1201, 1207 |
| BssNI | GRCGYC | 1 cut(s) | 900 |
| Bst2UI | CCWGG | 3 cut(s) | 780, 835, 1157 |
| Bst4CI | ACNGT | 2 cut(s) | 340, 530 |
| BstACI | GRCGYC | 1 cut(s) | 900 |
| BstBAI | YACGTR | 1 cut(s) | 349 |
| BstC8I | GCNNGC | 9 cut(s) | 51, 384, 391, 560, 819, 975, 1017, 1066, 1070 |
| BstDEI | CTNAG | 3 cut(s) | 984, 999, 1023 |
| BstDSI | CCRYGG | 2 cut(s) | 26, 873 |
| BstF5I | GGATG | 2 cut(s) | 832, 1151 |
| BstFNI | CGCG | 3 cut(s) | 400, 629, 893 |
| BstHHI | GCGC | 1 cut(s) | 631 |
| BstKTI | GATC | 9 cut(s) | 61, 69, 139, 520, 709, 942, 966, 1204, 1210 |
| BstMAI | GTCTC | 1 cut(s) | 1142 |
| BstMBI | GATC | 9 cut(s) | 58, 66, 136, 517, 706, 939, 963, 1201, 1207 |
| BstMCI | CGRYCG | 1 cut(s) | 289 |
| BstNI | CCWGG | 3 cut(s) | 780, 835, 1157 |
| BstNSI | RCATGY | 1 cut(s) | 1174 |
| BstSCI | CCNGG | 7 cut(s) | 90, 288, 486, 778, 833, 902, 1155 |
| BstSLI | GKGCMC | 2 cut(s) | 92, 819 |
| BstUI | CGCG | 3 cut(s) | 400, 629, 893 |
| BstV1I | GCAGC | 9 cut(s) | 21, 89, 383, 473, 574, 577, 580, 982, 1081 |
| BstV2I | GAAGAC | 1 cut(s) | 903 |
| BstZI | CGGCCG | 1 cut(s) | 286 |
| BsuRI | GGCC | 5 cut(s) | 288, 389, 817, 833, 872 |
| BtgI | CCRYGG | 2 cut(s) | 26, 873 |
| BtsCI | GGATG | 2 cut(s) | 832, 1151 |
| BtsI | GCAGTG | 1 cut(s) | 194 |
| BtsIMutI | CAGTG | 3 cut(s) | 194, 433, 1121 |
| BtuMI | TCGCGA | 1 cut(s) | 400 |
| BveI | ACCTGC | 1 cut(s) | 263 |
| Cac8I | GCNNGC | 9 cut(s) | 51, 384, 391, 560, 819, 975, 1017, 1066, 1070 |
| CciI | TCATGA | 1 cut(s) | 1204 |
| CfoI | GCGC | 1 cut(s) | 631 |
| Cfr10I | RCCGGY | 1 cut(s) | 382 |
| Cfr13I | GGNCC | 5 cut(s) | 352, 693, 815, 816, 1136 |
| CseI | GACGC | 1 cut(s) | 908 |
| Csp6I | GTAC | 1 cut(s) | 414 |
| CviAII | CATG | 2 cut(s) | 1171, 1205 |
| CviQI | GTAC | 1 cut(s) | 414 |
| DdeI | CTNAG | 3 cut(s) | 984, 999, 1023 |
| DpnI | GATC | 9 cut(s) | 60, 68, 138, 519, 708, 941, 965, 1203, 1209 |
| DpnII | GATC | 9 cut(s) | 58, 66, 136, 517, 706, 939, 963, 1201, 1207 |
| DraIII | CACNNNGTG | 1 cut(s) | 22 |
| DriI | GACNNNNNGTC | 1 cut(s) | 350 |
| EaeI | YGGCCR | 3 cut(s) | 286, 831, 870 |
| EagI | CGGCCG | 1 cut(s) | 286 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 350 |
| EciI | GGCGGA | 4 cut(s) | 950, 1027, 1090, 1168 |
| EclXI | CGGCCG | 1 cut(s) | 286 |
| Eco24I | GRGCYC | 2 cut(s) | 99, 819 |
| Eco47I | GGWCC | 3 cut(s) | 352, 693, 1136 |
| Eco52I | CGGCCG | 1 cut(s) | 286 |
| Eco57I | CTGAAG | 5 cut(s) | 59, 145, 590, 698, 884 |
| Eco72I | CACGTG | 1 cut(s) | 349 |
| EcoO109I | RGGNCCY | 2 cut(s) | 693, 1136 |
| EcoRII | CCWGG | 3 cut(s) | 778, 833, 1155 |
| EcoT38I | GRGCYC | 2 cut(s) | 99, 819 |
| FaeI | CATG | 2 cut(s) | 1174, 1208 |
| FaqI | GGGAC | 2 cut(s) | 679, 1149 |
| FatI | CATG | 2 cut(s) | 1170, 1204 |
| FauI | CCCGC | 3 cut(s) | 69, 651, 826 |
| FbaI | TGATCA | 3 cut(s) | 66, 706, 1207 |
| FokI | GGATG | 2 cut(s) | 839, 1138 |
| FriOI | GRGCYC | 2 cut(s) | 99, 819 |
| FspBI | CTAG | 1 cut(s) | 50 |
| GlaI | GCGC | 1 cut(s) | 630 |
| GsaI | CCCAGC | 1 cut(s) | 102 |
| GsuI | CTGGAG | 3 cut(s) | 409, 450, 762 |
| HaeIII | GGCC | 5 cut(s) | 288, 389, 817, 833, 872 |
| HapII | CCGG | 5 cut(s) | 92, 289, 383, 488, 904 |
| HgaI | GACGC | 1 cut(s) | 908 |
| HhaI | GCGC | 1 cut(s) | 631 |
| Hin1I | GRCGYC | 1 cut(s) | 900 |
| Hin1II | CATG | 2 cut(s) | 1174, 1208 |
| Hin6I | GCGC | 1 cut(s) | 629 |
| HinP1I | GCGC | 1 cut(s) | 629 |
| HindIII | AAGCTT | 1 cut(s) | 1062 |
| HinfI | GANTC | 5 cut(s) | 147, 483, 731, 794, 1029 |
| HpaII | CCGG | 5 cut(s) | 92, 289, 383, 488, 904 |
| HphI | GGTGA | 2 cut(s) | 76, 794 |
| Hpy188I | TCNGA | 7 cut(s) | 146, 164, 232, 344, 678, 826, 1144 |
| Hpy188III | TCNNGA | 6 cut(s) | 70, 300, 399, 515, 685, 1205 |
| Hpy99I | CGWCG | 3 cut(s) | 146, 400, 622 |
| HpyAV | CCTTC | 4 cut(s) | 623, 988, 1184, 1190 |
| HpyCH4III | ACNGT | 2 cut(s) | 340, 530 |
| HpyCH4IV | ACGT | 1 cut(s) | 348 |
| HpyCH4V | TGCA | 7 cut(s) | 4, 336, 552, 586, 851, 1048, 1068 |
| HpyF3I | CTNAG | 3 cut(s) | 984, 999, 1023 |
| HpySE526I | ACGT | 1 cut(s) | 348 |
| Hsp92I | GRCGYC | 1 cut(s) | 900 |
| Hsp92II | CATG | 2 cut(s) | 1174, 1208 |
| HspAI | GCGC | 1 cut(s) | 629 |
| KflI | GGGWCCC | 2 cut(s) | 693, 1136 |
| KroI | GCCGGC | 1 cut(s) | 382 |
| KroNI | GCCGGC | 1 cut(s) | 384 |
| Ksp22I | TGATCA | 3 cut(s) | 66, 706, 1207 |
| Kzo9I | GATC | 9 cut(s) | 58, 66, 136, 517, 706, 939, 963, 1201, 1207 |
| LmnI | GCTCC | 7 cut(s) | 94, 212, 469, 615, 859, 1040, 1118 |
| Lsp1109I | GCAGC | 9 cut(s) | 21, 89, 383, 473, 574, 577, 580, 982, 1081 |
| LweI | GCATC | 2 cut(s) | 416, 830 |
| MaeI | CTAG | 1 cut(s) | 50 |
| MaeII | ACGT | 1 cut(s) | 348 |
| MaeIII | GTNAC | 7 cut(s) | 278, 363, 428, 449, 524, 662, 1166 |
| MalI | GATC | 9 cut(s) | 60, 68, 138, 519, 708, 941, 965, 1203, 1209 |
| MboI | GATC | 9 cut(s) | 58, 66, 136, 517, 706, 939, 963, 1201, 1207 |
| MboII | GAAGA | 6 cut(s) | 68, 177, 630, 777, 780, 908 |
| MhlI | GDGCHC | 6 cut(s) | 92, 99, 209, 324, 819, 1123 |
| MlsI | TGGCCA | 1 cut(s) | 833 |
| MluCI | AATT | 3 cut(s) | 436, 649, 745 |
| MluNI | TGGCCA | 1 cut(s) | 833 |
| MlyI | GAGTC | 1 cut(s) | 477 |
| MmeI | TCCRAC | 2 cut(s) | 124, 367 |
| Mox20I | TGGCCA | 1 cut(s) | 833 |
| MroNI | GCCGGC | 1 cut(s) | 382 |
| MscI | TGGCCA | 1 cut(s) | 833 |
| MslI | CAYNNNNRTG | 1 cut(s) | 276 |
| Msp20I | TGGCCA | 1 cut(s) | 833 |
| MspA1I | CMGCKG | 1 cut(s) | 102 |
| MspI | CCGG | 5 cut(s) | 92, 289, 383, 488, 904 |
| MspR9I | CCNGG | 7 cut(s) | 92, 290, 488, 780, 835, 904, 1157 |
| Mva1269I | GAATGC | 1 cut(s) | 541 |
| MvaI | CCWGG | 3 cut(s) | 780, 835, 1157 |
| MvnI | CGCG | 3 cut(s) | 400, 629, 893 |
| NaeI | GCCGGC | 1 cut(s) | 384 |
| NciI | CCSGG | 4 cut(s) | 92, 290, 488, 904 |
| NdeII | GATC | 9 cut(s) | 58, 66, 136, 517, 706, 939, 963, 1201, 1207 |
| NgoMIV | GCCGGC | 1 cut(s) | 382 |
| NheI | GCTAGC | 1 cut(s) | 49 |
| NlaIII | CATG | 2 cut(s) | 1174, 1208 |
| NlaIV | GGNNCC | 8 cut(s) | 24, 96, 262, 694, 695, 817, 1137, 1138 |
| NmeAIII | GCCGAG | 1 cut(s) | 111 |
| NmuCI | GTSAC | 3 cut(s) | 278, 428, 524 |
| NruI | TCGCGA | 1 cut(s) | 400 |
| NspI | RCATGY | 1 cut(s) | 1174 |
| PagI | TCATGA | 1 cut(s) | 1204 |
| PciI | ACATGT | 1 cut(s) | 1170 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 132, 138 |
| PctI | GAATGC | 1 cut(s) | 541 |
| PdiI | GCCGGC | 1 cut(s) | 384 |
| PfeI | GAWTC | 4 cut(s) | 147, 731, 794, 1029 |
| PleI | GAGTC | 1 cut(s) | 477 |
| PmaCI | CACGTG | 1 cut(s) | 349 |
| PmlI | CACGTG | 1 cut(s) | 349 |
| PpsI | GAGTC | 1 cut(s) | 477 |
| Ppu21I | YACGTR | 1 cut(s) | 349 |
| PpuMI | RGGWCCY | 2 cut(s) | 693, 1136 |
| PscI | ACATGT | 1 cut(s) | 1170 |
| Psp5II | RGGWCCY | 2 cut(s) | 693, 1136 |
| Psp6I | CCWGG | 3 cut(s) | 778, 833, 1155 |
| PspCI | CACGTG | 1 cut(s) | 349 |
| PspFI | CCCAGC | 1 cut(s) | 98 |
| PspGI | CCWGG | 3 cut(s) | 778, 833, 1155 |
| PspN4I | GGNNCC | 8 cut(s) | 24, 96, 262, 694, 695, 817, 1137, 1138 |
| PspOMI | GGGCCC | 1 cut(s) | 815 |
| PspPI | GGNCC | 5 cut(s) | 352, 693, 815, 816, 1136 |
| PspPPI | RGGWCCY | 2 cut(s) | 693, 1136 |
| PvuII | CAGCTG | 1 cut(s) | 102 |
| RruI | TCGCGA | 1 cut(s) | 400 |
| RsaI | GTAC | 1 cut(s) | 415 |
| RsaNI | GTAC | 1 cut(s) | 414 |
| RseI | CAYNNNNRTG | 1 cut(s) | 276 |
| Sau3AI | GATC | 9 cut(s) | 58, 66, 136, 517, 706, 939, 963, 1201, 1207 |
| Sau96I | GGNCC | 5 cut(s) | 352, 693, 815, 816, 1136 |
| SchI | GAGTC | 1 cut(s) | 477 |
| ScrFI | CCNGG | 7 cut(s) | 92, 290, 488, 780, 835, 904, 1157 |
| SduI | GDGCHC | 6 cut(s) | 92, 99, 209, 324, 819, 1123 |
| SfaNI | GCATC | 2 cut(s) | 416, 830 |
| SinI | GGWCC | 3 cut(s) | 352, 693, 1136 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 276 |
| Sse9I | AATT | 3 cut(s) | 436, 649, 745 |
| SspMI | CTAG | 1 cut(s) | 50 |
| StyD4I | CCNGG | 7 cut(s) | 90, 288, 486, 778, 833, 902, 1155 |
| TaaI | ACNGT | 2 cut(s) | 340, 530 |
| TaiI | ACGT | 1 cut(s) | 351 |
| TaqI | TCGA | 3 cut(s) | 410, 686, 942 |
| TasI | AATT | 3 cut(s) | 436, 649, 745 |
| TatI | WGTACW | 1 cut(s) | 413 |
| TauI | GCSGC | 5 cut(s) | 261, 288, 389, 1106, 1109 |
| TfiI | GAWTC | 4 cut(s) | 147, 731, 794, 1029 |
| TscAI | CASTG | 3 cut(s) | 194, 433, 1128 |
| TseFI | GTSAC | 3 cut(s) | 278, 428, 524 |
| TseI | GCWGC | 9 cut(s) | 34, 102, 371, 461, 562, 565, 568, 970, 1094 |
| Tsp45I | GTSAC | 3 cut(s) | 278, 428, 524 |
| TspDTI | ATGAA | 5 cut(s) | 304, 548, 738, 744, 807 |
| TspGWI | ACGGA | 1 cut(s) | 606 |
| TspRI | CASTG | 3 cut(s) | 194, 433, 1128 |
| VpaK11BI | GGWCC | 3 cut(s) | 352, 693, 1136 |
| XapI | RAATTY | 1 cut(s) | 649 |
| XceI | RCATGY | 1 cut(s) | 1174 |
| XspI | CTAG | 1 cut(s) | 50 |