pycom13g24720

chaperone protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0013028
Physical Location & Seq
Reverse (-)
21749949 .. 21753702
3754 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3105 bp
ATGAGAGCGGGGCTGAGAACGATCCAGCAAACGTTAACCCCAGAGGCGGCGAGCGTCTTGAACCACTCGATTGCCGAAGCGGGTCGACGGAACCACGGCCAGACGACGCCGCTACACGTGGCAGCAACCCTTTTGTCCTCCCCCACCGGCTTCCTCCGCCAAGCATGCATCAAATCTCACCCGAATTCCTCCCACCCTCTGCAGTGCCGAGCTCTGGAGCTCTGCTTCAGTGTGGCTCTGGAGCGGTTGCCCACTGCCCAAAACATGAGTCCCGGTATGGAGCCCCCCATCTCTAATGCTCTCATGGCCGCCTTGAAGCGAGCTCAGGCTCACCAGCGCCGCGGCTGCCCCGAACAGCAGCAGCAACCTCTATTAGCCGTCAAAGTCGAGCTCGAGCAGCTCATCATCTCAATTCTCGATGACCCGAGTGTTAGTCGGGTCATGCGGGAGGCTAGTTTCTCTAGTCCCGCAGTCAAAGCCACGATTGAACAGACGCTGAACTCTTCTGCCGCCGCCGCTGCTCACGCCGCCGTCAATTCATCCCCAATCGGATTGCAATTCCGCCCCACTGGCCCCACGGTGCCACCCGTGAGCCGGAATTTATATTTGAATCCGAGGCTGCAGCAGCCGCTGGGAGCTGCAACACAATCGGGACAACATAGAGGGGAAGAGGTTAAGAGGGTTGCTGATATTTTGTTGAGAACGAAGAAGAGGAACCCAGTTTTGGTTGGCGATTCGGAGCCTGAGGCCATGACCAAAGAGCTCTTGAGGAGGATTCAGAGCAAGGAGTTGGCTGAAGGGCCGCTGAAGAATGTTGATGTCCTTCATTTGGAGGAGGTTGTTTCTTTGGATAGGAATCAGATAGTGTCAAAAATGAAGGAATTAGGGGGTTTGATTGAGACCCGGTTGTTGAATTTGACCGGGGGAGGGGTCATTCTTGATTTGGGTGACTTGAAATGGCTTGTGGAGCAGCCTGCGAGCTTTGGAGGAGTTCCAGGTCCAGGTCTAGTTTCGTCTCCCGTCCAACAGCAGGTGGTTTCGGAGGCAGGGCGGGCAGCAGTGGGGGAAATGGGGAAGCTATTGGCGAGGTATGGAGAGGGTAGTGAAACTGGCGGCCGGCTTTGGTTAATTGGGACTGCTACTTGTGAGACATATTTGAGGTGCCAAGTCTATCACCCTTCAATGGAAACTGATTGGGATCTACAGGCAGTGCCAATTGCTAGCAGAACGCCACTTTCAGGATTGTTTCCGAGGATTGGGGCGACCAACGGGATCCTTAGTAGCTCAGTGGAATCTTTGTCACCAATGAAAGGTTTTCCATCGACTTCAATTCCTCAACCAAGACTTTTGTCAGAGAACTCGGATCCTGCTCGAAGAGAAACATGTTGCCCGCAATGTACAGAGAGTTATGAGCAAGAGCTTGCAAAACTGGTTGCCAAGGAATCTGAGAAATCATCTTCTGAATCAGAGGCAGCTCAACCACCGCTACCTCAGTGGTTGCAGAATGCTAAACCCCGTGATGTTCATGCCAGTACATTAGATCAGACGCAGCCCAGTTTCAGCTCGAAGAGAATTATTCCAACAACCCTCTCAATGACGAGCTTGTACAATCCAAACTTGCTTGGTCGCCAACCATTCCAAACCAGATCACATGTGAATAAGAATCTTGGGACTCTGCAACTGAGCACAAATCCGCTGACCAGCCAACCATCTGAACGGGCAATTTCCCAACCAGAAAGCCCTGTAAGGACAGAGCTGGTTCTTGGCCAAACAGAAGTCACTGAATTCACCTCCGAGCAAATGCATAAAGAGCGCATCAGAGACTTTATGGGCTGCATGCCTTCTGAACCACAGAACAAGTTACATGAAATGCAAACAGAGGATAAACAATTGTGTCAAATAGACACTGATTCATTCAAAAAGCTTTACAAAGGTTTAATGGAGGTGTGGTGGCAGCAAGAAGCAGCAGCCTCTGTGGCTGAAACTGTGACACAATGCAAGTTGGGCAATGGAAAGAGACATCGTGCTGGGTCAAGGGGAGACATGTGGCTGCTGTTTATGGGCCTGGACTGTGTTGGCAAGAAGAAGATGGCATCAGCACTTTCAGAACTGGTATGTGGGTCCAACCCAGTGATGATCGATCTTAGCTCCCAACGTGGTAATTTGCAATCAGATATGAGTTTCCGTGGTAAAACAGTGGTGGATCGAATAGCAGAAACAGTTAAGAGAAACCCTTTTTCAGTAGTTGTGCTTGAGGACATTAATGAAGCTGATCTGATAGTTCGCGGTAGCATAAAACGGGCAATTGAGAGAGGTCGTCTTGCTGACTCTTATGGCCGTGAAATCAGTCTTGGAAATGTTATTTTCATCCTTACCGCAAATTGGTTGCCGGAAAATCTTAGGCCCTTGTCAAACGACAATTCACTTGAAGAAAAACTTGCCAGTATAGCGAAGAGCAGCTGGCAGTTAAAGCTATCTGTCTGTGCTAGGGCTGCAAAACGCCGTGCCAATTGGTTAACAGATGAAGACAGGGCCACAAGGCCTAGGACAGATACTGGTTCAGCATTAGGATTCGATCTGAATGAAGCTGCGGATGCTGAGGGTGACAGAACAGACGGCTCGCTTAATTCAAGTGATCTTACGGTTGATAATGAAGATGACAATCGTCTCAATAACAGAACCTTACTCAAAGTCACAACCACATCAGTACCCCGGGAATTACTGGATAGTGTTGATGATGCCATTGTGTTCAAGCCAGTGGATTTCAACCCCATTCGGCAAAACATCACAAACTCCATCAGAAAAAGATTCTCAAAAATAATGGGTGAGGGGATTTCATTTGAATTACCAGAGGATGCTGTTGAAAAGATCCTGACCGGGATATGGCTAGGCCGGACTGGCTTAGAGGAATGGGCAGAAAAGGTTCTCGCCCCGAGCATCCAGCAACTCAAGTCCTACCTTGGTGGCAGCACTGGTGTGATAGCCGACGAGTCATTGGTGGTGAGGCTTGAATCTGATGGTGCTTCGGACGATCGGAGCCGGGGAGATAGGCTCCCTAGTAGCATCAATGTGGGTGTGGTGCCTGATGGGTTGAGACAAAAATGA

Protein Analysis

1035

Amino Acids

113.17

Weight (kDa)

6.63

Isoelectric Point (pI)

49.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Clp_N PF02861 12 - 113 1.1e-06 Clp repeat (R) N-terminal domain
NBD_SMAX1 PF23569 221 - 409 2.9e-32 SMAX1 nucleotide binding domain
AAA_2 PF07724 737 - 802 1.8e-07 AAA domain (Cdc48 subfamily)
AAA_lid_SMAX1 PF26587 921 - 1007 4.9e-23 SMAX1-like, AAA+ ATPase lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013028)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G57710
fragaria_vesca FvH4_4g09820
malus_domestica MD13G1261900.v1.1 MD16G1264200.v1.1
prunus_persica Prupe.1G095200_v2.0.a1 Prupe.1G095200_v2.0.a1
pyrus_communis pycom13g24720 pycom16g23290
rosa_chinensis RchiOBHm_Chr4g0404601
rosa_laevigata RLG00000008920
rosa_multiflora Rmu_sc0002699.1_g000006
rosa_roxburghii Rroxscaffold_5G00348750
rosa_rugosa Rorug04G0047700
rosa_samantha Rh4AG123800 Rh4BG117200 Rh4CG131900 Rh4DG116700
rosa_wichuraiana Rw4G010030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1021
Acc36I ACCTGC 1 cut(s) 1021
AccB1I GGYRCC 3 cut(s) 580, 1161, 3079
AccBSI CCGCTC 2 cut(s) 8, 244
AccI GTMKAC 1 cut(s) 85
AccII CGCG 2 cut(s) 342, 2286
AclI AACGTT 1 cut(s) 32
AclWI GGATC 8 cut(s) 16, 1206, 1267, 1280, 1358, 1371, 2211, 2863
AcoI YGGCCR 5 cut(s) 97, 306, 1114, 1765, 2335
AcsI RAATTY 4 cut(s) 184, 598, 913, 1784
AcuI CTGAAG 3 cut(s) 211, 816, 827
AcvI CACGTG 1 cut(s) 118
AcyI GRCGYC 1 cut(s) 107
AfaI GTAC 4 cut(s) 1399, 1534, 1607, 2709
AflIII ACRYGT 4 cut(s) 115, 1382, 1651, 2043
AjnI CCWGG 3 cut(s) 994, 1000, 2064
AjuI GAANNNNNNNTTGG 4 cut(s) 707, 739, 2334, 2366
AleI CACNNNNGTG 1 cut(s) 2975
Alw21I GWGCWC 6 cut(s) 214, 222, 325, 393, 765, 1688
Alw26I GTCTC 8 cut(s) 893, 1020, 1142, 1815, 2011, 2034, 2672, 3088
AlwI GGATC 8 cut(s) 16, 1206, 1267, 1280, 1358, 1371, 2211, 2863
AlwNI CAGNNNCTG 4 cut(s) 496, 631, 1973, 2555
Ama87I CYCGRG 4 cut(s) 392, 424, 2712, 2932
ApoI RAATTY 4 cut(s) 184, 598, 913, 1784
ArsI GACNNNNNNTTYG 2 cut(s) 253, 285
AseI ATTAAT 1 cut(s) 2262
Asp700I GAANNNNTTC 1 cut(s) 2922
AspA2I CCTAGG 1 cut(s) 2543
AspLEI GCGC 2 cut(s) 339, 1815
AspS9I GGNCC 7 cut(s) 572, 800, 998, 2062, 2121, 2403, 2532
AsuC2I CCSGG 7 cut(s) 273, 904, 922, 2713, 2714, 2878, 3041
AsuHPI GGTGA 9 cut(s) 170, 323, 959, 1166, 1293, 1780, 2615, 2837, 3013
AsuNHI GCTAGC 1 cut(s) 1220
AvaI CYCGRG 4 cut(s) 392, 424, 2712, 2932
AvaII GGWCC 2 cut(s) 998, 2121
AvrII CCTAGG 1 cut(s) 2543
AxyI CCTNAGG 1 cut(s) 744
BaeI ACNNNNGTAYC 2 cut(s) 2691, 2724
BalI TGGCCA 1 cut(s) 1767
BamHI GGATCC 2 cut(s) 1272, 1363
BanI GGYRCC 3 cut(s) 580, 1161, 3079
BanII GRGCYC 6 cut(s) 214, 222, 285, 325, 393, 765
BbrPI CACGTG 1 cut(s) 118
BbsI GAAGAC 1 cut(s) 2532
Bbv12I GWGCWC 6 cut(s) 214, 222, 325, 393, 765, 1688
BbvCI CCTCAGC 1 cut(s) 2598
BccI CCATC 7 cut(s) 296, 1327, 1717, 2083, 2804, 3011, 3080
BceAI ACGGC 6 cut(s) 112, 362, 515, 2322, 2487, 2632
BcgI CGANNNNNNTGC 2 cut(s) 630, 664
BciT130I CCWGG 3 cut(s) 996, 1002, 2066
BcnI CCSGG 7 cut(s) 273, 904, 922, 2713, 2714, 2878, 3041
BcoDI GTCTC 8 cut(s) 893, 1020, 1142, 1815, 2011, 2034, 2672, 3088
BfaI CTAG 8 cut(s) 453, 462, 1007, 1221, 2487, 2544, 2888, 3057
BfmI CTRYAG 3 cut(s) 200, 620, 1202
BfoI RGCGCY 1 cut(s) 340
BfuAI ACCTGC 1 cut(s) 1021
BglI GCCNNNNNGGC 3 cut(s) 570, 1976, 2898
BlnI CCTAGG 1 cut(s) 2543
Bme18I GGWCC 2 cut(s) 998, 2121
BmeT110I CYCGRG 4 cut(s) 392, 424, 2712, 2932
BmgT120I GGNCC 7 cut(s) 572, 800, 998, 2062, 2121, 2403, 2532
BmrI ACTGGG 3 cut(s) 713, 1548, 2123
BmsI GCATC 8 cut(s) 177, 1824, 2102, 2584, 2728, 2845, 2946, 3072
BmtI GCTAGC 1 cut(s) 1224
BmuI ACTGGG 3 cut(s) 713, 1548, 2123
BoxI GACNNNNGTC 2 cut(s) 1348, 2664
BpiI GAAGAC 1 cut(s) 2532
BplI GAGNNNNNCTC 2 cut(s) 3036, 3068
BpmI CTGGAG 2 cut(s) 236, 260
Bpu10I CCTNAGC 2 cut(s) 324, 2598
BpuEI CTTGAG 3 cut(s) 787, 2273, 2933
BpuMI CCSGG 7 cut(s) 273, 904, 922, 2713, 2714, 2878, 3041
Bsa29I ATCGAT 1 cut(s) 2139
BsaAI YACGTR 1 cut(s) 118
BsaBI GATNNNNATC 3 cut(s) 855, 1197, 2661
BsaHI GRCGYC 1 cut(s) 107
BsaI GGTCTC 1 cut(s) 893
BsaXI ACNNNNNCTCC 2 cut(s) 1934, 1964
Bse118I RCCGGY 2 cut(s) 146, 1116
Bse21I CCTNAGG 1 cut(s) 744
Bse3DI GCAATG 2 cut(s) 1400, 2014
Bse8I GATNNNNATC 3 cut(s) 855, 1197, 2661
BseBI CCWGG 3 cut(s) 996, 1002, 2066
BseCI ATCGAT 1 cut(s) 2139
BseGI GGATG 5 cut(s) 539, 2367, 2599, 2860, 2937
BseJI GATNNNNATC 3 cut(s) 855, 1197, 2661
BseMI GCAATG 2 cut(s) 1400, 2014
BseMII CTCAG 8 cut(s) 5, 338, 735, 1299, 1437, 1505, 1673, 2589
BseRI GAGGAG 3 cut(s) 784, 848, 1002
BseX3I CGGCCG 1 cut(s) 1114
BseYI CCCAGC 2 cut(s) 631, 2027
Bsh1236I CGCG 2 cut(s) 342, 2286
Bsh1285I CGRYCG 2 cut(s) 1117, 3034
BshNI GGYRCC 3 cut(s) 580, 1161, 3079
BshVI ATCGAT 1 cut(s) 2139
BsiEI CGRYCG 2 cut(s) 1117, 3034
BsiHKAI GWGCWC 6 cut(s) 214, 222, 325, 393, 765, 1688
BsiHKCI CYCGRG 4 cut(s) 392, 424, 2712, 2932
BslFI GGGAC 5 cut(s) 255, 450, 666, 1147, 1684
BsmAI GTCTC 8 cut(s) 893, 1020, 1142, 1815, 2011, 2034, 2672, 3088
BsmBI CGTCTC 2 cut(s) 1020, 2672
BsmFI GGGAC 5 cut(s) 255, 450, 666, 1147, 1684
BsmI GAATGC 1 cut(s) 1510
Bso31I GGTCTC 1 cut(s) 893
BsoBI CYCGRG 4 cut(s) 392, 424, 2712, 2932
Bsp1286I GDGCHC 7 cut(s) 214, 222, 285, 325, 393, 765, 1688
Bsp1407I TGTACA 2 cut(s) 1397, 1605
BspCNI CTCAG 8 cut(s) 6, 337, 736, 1298, 1438, 1504, 1674, 2590
BspDI ATCGAT 1 cut(s) 2139
BspFNI CGCG 2 cut(s) 342, 2286
BspMAI CTGCAG 2 cut(s) 204, 624
BspMI ACCTGC 1 cut(s) 1021
BspOI GCTAGC 1 cut(s) 1224
BspPI GGATC 8 cut(s) 16, 1206, 1267, 1280, 1358, 1371, 2211, 2863
BspQI GCTCTTC 1 cut(s) 2447
BspT107I GGYRCC 3 cut(s) 580, 1161, 3079
BspTNI GGTCTC 1 cut(s) 893
BsrBI CCGCTC 2 cut(s) 8, 244
BsrDI GCAATG 2 cut(s) 1400, 2014
BsrFI RCCGGY 2 cut(s) 146, 1116
BsrGI TGTACA 2 cut(s) 1397, 1605
BssAI RCCGGY 2 cut(s) 146, 1116
BssNI GRCGYC 1 cut(s) 107
BssT1I CCWWGG 3 cut(s) 1437, 2543, 2959
Bst2UI CCWGG 3 cut(s) 996, 1002, 2066
Bst4CI ACNGT 6 cut(s) 580, 1987, 2072, 2197, 2221, 2644
Bst6I CTCTTC 6 cut(s) 508, 663, 704, 1369, 1562, 2447
BstACI GRCGYC 1 cut(s) 107
BstAUI TGTACA 2 cut(s) 1397, 1605
BstBAI YACGTR 1 cut(s) 118
BstDSI CCRYGG 4 cut(s) 94, 340, 576, 2185
BstF5I GGATG 5 cut(s) 539, 2367, 2599, 2860, 2937
BstFNI CGCG 2 cut(s) 342, 2286
BstH2I RGCGCY 1 cut(s) 340
BstHHI GCGC 2 cut(s) 339, 1815
BstMAI GTCTC 8 cut(s) 893, 1020, 1142, 1815, 2011, 2034, 2672, 3088
BstMCI CGRYCG 2 cut(s) 1117, 3034
BstNI CCWGG 3 cut(s) 996, 1002, 2066
BstNSI RCATGY 5 cut(s) 168, 1386, 1655, 1840, 2047
BstPAI GACNNNNGTC 2 cut(s) 1348, 2664
BstSFI CTRYAG 3 cut(s) 200, 620, 1202
BstUI CGCG 2 cut(s) 342, 2286
BstV2I GAAGAC 1 cut(s) 2532
BstX2I RGATCY 4 cut(s) 1198, 1272, 1363, 2868
BstYI RGATCY 4 cut(s) 1198, 1272, 1363, 2868
BstZI CGGCCG 1 cut(s) 1114
Bsu15I ATCGAT 1 cut(s) 2139
Bsu36I CCTNAGG 1 cut(s) 744
BsuTUI ATCGAT 1 cut(s) 2139
BtgI CCRYGG 4 cut(s) 94, 340, 576, 2185
BtsCI GGATG 5 cut(s) 539, 2367, 2599, 2860, 2937
BtsI GCAGTG 4 cut(s) 209, 252, 1065, 1215
BveI ACCTGC 1 cut(s) 1021
CaiI CAGNNNCTG 4 cut(s) 496, 631, 1973, 2555
CfoI GCGC 2 cut(s) 339, 1815
Cfr10I RCCGGY 2 cut(s) 146, 1116
Cfr13I GGNCC 7 cut(s) 572, 800, 998, 2062, 2121, 2403, 2532
Cfr42I CCGCGG 1 cut(s) 343
Cfr9I CCCGGG 1 cut(s) 2712
ClaI ATCGAT 1 cut(s) 2139
CseI GACGC 4 cut(s) 43, 115, 502, 1555
Csp6I GTAC 4 cut(s) 1398, 1533, 1606, 2708
CviQI GTAC 4 cut(s) 1398, 1533, 1606, 2708
EaeI YGGCCR 5 cut(s) 97, 306, 1114, 1765, 2335
EagI CGGCCG 1 cut(s) 1114
Eam1104I CTCTTC 6 cut(s) 508, 663, 704, 1369, 1562, 2447
EarI CTCTTC 6 cut(s) 508, 663, 704, 1369, 1562, 2447
EciI GGCGGA 2 cut(s) 146, 551
Ecl136II GAGCTC 5 cut(s) 212, 220, 323, 391, 763
EclXI CGGCCG 1 cut(s) 1114
Eco130I CCWWGG 3 cut(s) 1437, 2543, 2959
Eco147I AGGCCT 1 cut(s) 2542
Eco24I GRGCYC 6 cut(s) 214, 222, 285, 325, 393, 765
Eco31I GGTCTC 1 cut(s) 893
Eco47I GGWCC 2 cut(s) 998, 2121
Eco52I CGGCCG 1 cut(s) 1114
Eco53kI GAGCTC 5 cut(s) 212, 220, 323, 391, 763
Eco57I CTGAAG 3 cut(s) 211, 816, 827
Eco72I CACGTG 1 cut(s) 118
Eco81I CCTNAGG 1 cut(s) 744
Eco88I CYCGRG 4 cut(s) 392, 424, 2712, 2932
EcoICRI GAGCTC 5 cut(s) 212, 220, 323, 391, 763
EcoO109I RGGNCCY 1 cut(s) 2403
EcoRI GAATTC 2 cut(s) 184, 1784
EcoRII CCWGG 3 cut(s) 994, 1000, 2064
EcoT14I CCWWGG 3 cut(s) 1437, 2543, 2959
EcoT22I ATGCAT 2 cut(s) 170, 1806
EcoT38I GRGCYC 6 cut(s) 214, 222, 285, 325, 393, 765
ErhI CCWWGG 3 cut(s) 1437, 2543, 2959
Esp3I CGTCTC 2 cut(s) 1020, 2672
FalI AAGNNNNNCTT 2 cut(s) 2421, 2453
FaqI GGGAC 5 cut(s) 255, 450, 666, 1147, 1684
FauI CCCGC 5 cut(s) 73, 438, 475, 1044, 1398
FblI GTMKAC 1 cut(s) 85
FokI GGATG 5 cut(s) 526, 2354, 2606, 2867, 2924
FriOI GRGCYC 6 cut(s) 214, 222, 285, 325, 393, 765
FspBI CTAG 8 cut(s) 453, 462, 1007, 1221, 2487, 2544, 2888, 3057
GlaI GCGC 2 cut(s) 338, 1814
GsaI CCCAGC 2 cut(s) 635, 2031
GsuI CTGGAG 2 cut(s) 236, 260
HaeII RGCGCY 1 cut(s) 340
HgaI GACGC 4 cut(s) 43, 115, 502, 1555
HhaI GCGC 2 cut(s) 339, 1815
Hin1I GRCGYC 1 cut(s) 107
Hin6I GCGC 2 cut(s) 337, 1813
HinP1I GCGC 2 cut(s) 337, 1813
HincII GTYRAC 3 cut(s) 36, 86, 2517
HindII GTYRAC 3 cut(s) 36, 86, 2517
HindIII AAGCTT 1 cut(s) 1922
HpaI GTTAAC 2 cut(s) 36, 2517
HphI GGTGA 9 cut(s) 170, 323, 959, 1166, 1293, 1780, 2615, 2837, 3013
Hpy166II GTNNAC 3 cut(s) 36, 86, 2517
Hpy188III TCNNGA 9 cut(s) 58, 215, 239, 416, 651, 766, 938, 1239, 2872
Hpy8I GTNNAC 3 cut(s) 36, 86, 2517
Hpy99I CGWCG 3 cut(s) 90, 109, 2990
HpyAV CCTTC 5 cut(s) 791, 833, 871, 1188, 1851
HpyCH4III ACNGT 6 cut(s) 580, 1987, 2072, 2197, 2221, 2644
HpyCH4IV ACGT 3 cut(s) 32, 117, 2155
HpySE526I ACGT 3 cut(s) 32, 117, 2155
Hsp92I GRCGYC 1 cut(s) 107
HspAI GCGC 2 cut(s) 337, 1813
KroI GCCGGC 1 cut(s) 1116
KroNI GCCGGC 1 cut(s) 1118
KspAI GTTAAC 2 cut(s) 36, 2517
KspI CCGCGG 1 cut(s) 343
LguI GCTCTTC 1 cut(s) 2447
LmnI GCTCC 9 cut(s) 217, 241, 280, 635, 739, 967, 2153, 3036, 3057
LweI GCATC 8 cut(s) 177, 1824, 2102, 2584, 2728, 2845, 2946, 3072
MaeI CTAG 8 cut(s) 453, 462, 1007, 1221, 2487, 2544, 2888, 3057
MaeII ACGT 3 cut(s) 32, 117, 2155
MaeIII GTNAC 7 cut(s) 947, 1299, 1777, 1860, 1987, 2603, 2692
MbiI CCGCTC 2 cut(s) 8, 244
MfeI CAATTG 4 cut(s) 1215, 1889, 2304, 2509
MflI RGATCY 4 cut(s) 1198, 1272, 1363, 2868
MhlI GDGCHC 7 cut(s) 214, 222, 285, 325, 393, 765, 1688
MlsI TGGCCA 1 cut(s) 1767
MluNI TGGCCA 1 cut(s) 1767
MlyI GAGTC 4 cut(s) 277, 1666, 2321, 2999
MmeI TCCRAC 3 cut(s) 1048, 1604, 2148
Mox20I TGGCCA 1 cut(s) 1767
Mph1103I ATGCAT 2 cut(s) 170, 1806
MroNI GCCGGC 1 cut(s) 1116
MroXI GAANNNNTTC 1 cut(s) 2922
MscI TGGCCA 1 cut(s) 1767
MseI TTAA 9 cut(s) 35, 675, 1127, 1937, 2223, 2262, 2468, 2516, 2625
MslI CAYNNNNRTG 2 cut(s) 2975, 3068
Msp20I TGGCCA 1 cut(s) 1767
MspA1I CMGCKG 6 cut(s) 342, 518, 631, 805, 1696, 2460
MunI CAATTG 4 cut(s) 1215, 1889, 2304, 2509
Mva1269I GAATGC 1 cut(s) 1510
MvaI CCWGG 3 cut(s) 996, 1002, 2066
MvnI CGCG 2 cut(s) 342, 2286
NaeI GCCGGC 1 cut(s) 1118
NciI CCSGG 7 cut(s) 273, 904, 922, 2713, 2714, 2878, 3041
NgoMIV GCCGGC 1 cut(s) 1116
NheI GCTAGC 1 cut(s) 1220
NmeAIII GCCGAG 1 cut(s) 233
NmuCI GTSAC 6 cut(s) 947, 1299, 1777, 1987, 2603, 2692
NsiI ATGCAT 2 cut(s) 170, 1806
NspI RCATGY 5 cut(s) 168, 1386, 1655, 1840, 2047
OliI CACNNNNGTG 1 cut(s) 2975
PaeI GCATGC 2 cut(s) 168, 1840
PaeR7I CTCGAG 1 cut(s) 392
PaqCI CACCTGC 1 cut(s) 1021
PceI AGGCCT 1 cut(s) 2542
PciI ACATGT 3 cut(s) 1382, 1651, 2043
PciSI GCTCTTC 1 cut(s) 2447
PctI GAATGC 1 cut(s) 1510
PdiI GCCGGC 1 cut(s) 1118
PdmI GAANNNNTTC 1 cut(s) 2922
Ple19I CGATCG 1 cut(s) 3034
PleI GAGTC 4 cut(s) 276, 1666, 2321, 2998
PmaCI CACGTG 1 cut(s) 118
PmlI CACGTG 1 cut(s) 118
PpsI GAGTC 4 cut(s) 276, 1666, 2321, 2998
Ppu21I YACGTR 1 cut(s) 118
PscI ACATGT 3 cut(s) 1382, 1651, 2043
PshAI GACNNNNGTC 2 cut(s) 1348, 2664
PshBI ATTAAT 1 cut(s) 2262
Psp124BI GAGCTC 5 cut(s) 214, 222, 325, 393, 765
Psp1406I AACGTT 1 cut(s) 32
Psp6I CCWGG 3 cut(s) 994, 1000, 2064
PspCI CACGTG 1 cut(s) 118
PspFI CCCAGC 2 cut(s) 631, 2027
PspGI CCWGG 3 cut(s) 994, 1000, 2064
PspPI GGNCC 7 cut(s) 572, 800, 998, 2062, 2121, 2403, 2532
PspXI VCTCGAGB 1 cut(s) 392
PstI CTGCAG 2 cut(s) 204, 624
PstNI CAGNNNCTG 4 cut(s) 496, 631, 1973, 2555
PsuI RGATCY 4 cut(s) 1198, 1272, 1363, 2868
PvuI CGATCG 1 cut(s) 3034
PvuII CAGCTG 1 cut(s) 2460
RsaI GTAC 4 cut(s) 1399, 1534, 1607, 2709
RsaNI GTAC 4 cut(s) 1398, 1533, 1606, 2708
RseI CAYNNNNRTG 2 cut(s) 2975, 3068
SacI GAGCTC 5 cut(s) 214, 222, 325, 393, 765
SacII CCGCGG 1 cut(s) 343
SalI GTCGAC 1 cut(s) 84
SapI GCTCTTC 1 cut(s) 2447
SaqAI TTAA 9 cut(s) 35, 675, 1127, 1937, 2223, 2262, 2468, 2516, 2625
Sau96I GGNCC 7 cut(s) 572, 800, 998, 2062, 2121, 2403, 2532
SchI GAGTC 4 cut(s) 277, 1666, 2321, 2999
SduI GDGCHC 7 cut(s) 214, 222, 285, 325, 393, 765, 1688
SfaNI GCATC 8 cut(s) 177, 1824, 2102, 2584, 2728, 2845, 2946, 3072
SfcI CTRYAG 3 cut(s) 200, 620, 1202
Sfr274I CTCGAG 1 cut(s) 392
Sfr303I CCGCGG 1 cut(s) 343
SgrBI CCGCGG 1 cut(s) 343
SinI GGWCC 2 cut(s) 998, 2121
SlaI CTCGAG 1 cut(s) 392
SmaI CCCGGG 1 cut(s) 2714
SmiMI CAYNNNNRTG 2 cut(s) 2975, 3068
SmlI CTYRAG 4 cut(s) 392, 766, 2252, 2948
SmoI CTYRAG 4 cut(s) 392, 766, 2252, 2948
SphI GCATGC 2 cut(s) 168, 1840
SseBI AGGCCT 1 cut(s) 2542
SspMI CTAG 8 cut(s) 453, 462, 1007, 1221, 2487, 2544, 2888, 3057
SstI GAGCTC 5 cut(s) 214, 222, 325, 393, 765
StuI AGGCCT 1 cut(s) 2542
StyI CCWWGG 3 cut(s) 1437, 2543, 2959
TaaI ACNGT 6 cut(s) 580, 1987, 2072, 2197, 2221, 2644
TaiI ACGT 3 cut(s) 35, 120, 2158
TatI WGTACW 3 cut(s) 1397, 1532, 1605
Tru1I TTAA 9 cut(s) 35, 675, 1127, 1937, 2223, 2262, 2468, 2516, 2625
Tru9I TTAA 9 cut(s) 35, 675, 1127, 1937, 2223, 2262, 2468, 2516, 2625
TseFI GTSAC 6 cut(s) 947, 1299, 1777, 1987, 2603, 2692
Tsp45I GTSAC 6 cut(s) 947, 1299, 1777, 1987, 2603, 2692
TspGWI ACGGA 2 cut(s) 103, 2174
TspMI CCCGGG 1 cut(s) 2712
VpaK11BI GGWCC 2 cut(s) 998, 2121
VspI ATTAAT 1 cut(s) 2262
XapI RAATTY 4 cut(s) 184, 598, 913, 1784
XceI RCATGY 5 cut(s) 168, 1386, 1655, 1840, 2047
XhoI CTCGAG 1 cut(s) 392
XmaI CCCGGG 1 cut(s) 2712
XmaJI CCTAGG 1 cut(s) 2543
XmiI GTMKAC 1 cut(s) 85
XmnI GAANNNNTTC 1 cut(s) 2922
XspI CTAG 8 cut(s) 453, 462, 1007, 1221, 2487, 2544, 2888, 3057
Zsp2I ATGCAT 2 cut(s) 170, 1806
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.