Polysaccharide biosynthesis
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g05560 |
| malus_domestica | MD05G1091700.v1.1 |
| prunus_persica | Prupe.8G131100_v2.0.a1 |
| pyrus_communis | pycom05g08580 pycom14g01040 |
| rosa_chinensis | RchiOBHm_Chr6g0255871 |
| rosa_laevigata | RLG00000014807 |
| rosa_multiflora | Rmu_sc0001738.1_g000001 Rmu_sc0001738.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00209580 |
| rosa_rugosa | Rorug05G0500200 Rorug05G0561900 |
| rosa_samantha | Rh6AG080200 Rh6CG005900 Rh6CG071000 Rh6DG006100 Rh6DG068300 |
| rosa_wichuraiana | Rw6G006920 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 193 |
| AciI | CCGC | 4 cut(s) | 74, 78, 149, 174 |
| AcyI | GRCGYC | 1 cut(s) | 266 |
| AfaI | GTAC | 1 cut(s) | 63 |
| AflIII | ACRYGT | 1 cut(s) | 141 |
| AjnI | CCWGG | 1 cut(s) | 84 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 191, 223 |
| AluBI | AGCT | 1 cut(s) | 279 |
| AluI | AGCT | 1 cut(s) | 279 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 239 |
| AoxI | GGCC | 1 cut(s) | 220 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 113, 145 |
| AspLEI | GCGC | 1 cut(s) | 194 |
| AspS9I | GGNCC | 1 cut(s) | 88 |
| AsuHPI | GGTGA | 5 cut(s) | 14, 40, 151, 172, 217 |
| AvaII | GGWCC | 1 cut(s) | 88 |
| BceAI | ACGGC | 1 cut(s) | 65 |
| BciT130I | CCWGG | 1 cut(s) | 86 |
| Bme1390I | CCNGG | 1 cut(s) | 86 |
| Bme18I | GGWCC | 1 cut(s) | 88 |
| BmgT120I | GGNCC | 1 cut(s) | 88 |
| BmiI | GGNNCC | 1 cut(s) | 90 |
| BmrFI | CCNGG | 1 cut(s) | 86 |
| BmsI | GCATC | 1 cut(s) | 143 |
| BsaHI | GRCGYC | 1 cut(s) | 266 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 54, 84 |
| Bse1I | ACTGG | 1 cut(s) | 228 |
| BseBI | CCWGG | 1 cut(s) | 86 |
| BseGI | GGATG | 1 cut(s) | 134 |
| BseNI | ACTGG | 1 cut(s) | 228 |
| BseRI | GAGGAG | 1 cut(s) | 31 |
| BshFI | GGCC | 1 cut(s) | 222 |
| BslFI | GGGAC | 1 cut(s) | 130 |
| BsmFI | GGGAC | 1 cut(s) | 130 |
| BsnI | GGCC | 1 cut(s) | 222 |
| BspACI | CCGC | 4 cut(s) | 74, 78, 149, 174 |
| BspANI | GGCC | 1 cut(s) | 222 |
| BspLI | GGNNCC | 1 cut(s) | 90 |
| BsrI | ACTGG | 1 cut(s) | 228 |
| BssNI | GRCGYC | 1 cut(s) | 266 |
| Bst2UI | CCWGG | 1 cut(s) | 86 |
| BstACI | GRCGYC | 1 cut(s) | 266 |
| BstC8I | GCNNGC | 1 cut(s) | 78 |
| BstF5I | GGATG | 1 cut(s) | 134 |
| BstHHI | GCGC | 1 cut(s) | 194 |
| BstNI | CCWGG | 1 cut(s) | 86 |
| BstNSI | RCATGY | 1 cut(s) | 145 |
| BstSCI | CCNGG | 1 cut(s) | 84 |
| BsuRI | GGCC | 1 cut(s) | 222 |
| BtsCI | GGATG | 1 cut(s) | 134 |
| Cac8I | GCNNGC | 1 cut(s) | 78 |
| CaiI | CAGNNNCTG | 1 cut(s) | 239 |
| CfoI | GCGC | 1 cut(s) | 194 |
| Cfr13I | GGNCC | 1 cut(s) | 88 |
| CseI | GACGC | 1 cut(s) | 255 |
| Csp6I | GTAC | 1 cut(s) | 62 |
| CviAII | CATG | 1 cut(s) | 142 |
| CviJI | RGCY | 2 cut(s) | 222, 279 |
| CviKI_1 | RGCY | 2 cut(s) | 222, 279 |
| CviQI | GTAC | 1 cut(s) | 62 |
| EciI | GGCGGA | 1 cut(s) | 163 |
| Eco47I | GGWCC | 1 cut(s) | 88 |
| EcoRII | CCWGG | 1 cut(s) | 84 |
| FaeI | CATG | 1 cut(s) | 145 |
| FaiI | YATR | 2 cut(s) | 143, 167 |
| FaqI | GGGAC | 1 cut(s) | 130 |
| FatI | CATG | 1 cut(s) | 141 |
| FauI | CCCGC | 3 cut(s) | 81, 85, 156 |
| FokI | GGATG | 1 cut(s) | 121 |
| FspI | TGCGCA | 1 cut(s) | 193 |
| GlaI | GCGC | 1 cut(s) | 193 |
| HaeIII | GGCC | 1 cut(s) | 222 |
| HgaI | GACGC | 1 cut(s) | 255 |
| HhaI | GCGC | 1 cut(s) | 194 |
| Hin1I | GRCGYC | 1 cut(s) | 266 |
| Hin1II | CATG | 1 cut(s) | 145 |
| Hin6I | GCGC | 1 cut(s) | 192 |
| HinP1I | GCGC | 1 cut(s) | 192 |
| HphI | GGTGA | 5 cut(s) | 14, 40, 151, 172, 217 |
| Hpy188III | TCNNGA | 1 cut(s) | 233 |
| HpyAV | CCTTC | 1 cut(s) | 67 |
| HpyCH4V | TGCA | 1 cut(s) | 204 |
| Hsp92I | GRCGYC | 1 cut(s) | 266 |
| Hsp92II | CATG | 1 cut(s) | 145 |
| HspAI | GCGC | 1 cut(s) | 192 |
| LpnPI | CCDG | 5 cut(s) | 71, 98, 241, 246, 252 |
| LweI | GCATC | 1 cut(s) | 143 |
| MboII | GAAGA | 1 cut(s) | 89 |
| MluCI | AATT | 2 cut(s) | 205, 254 |
| MseI | TTAA | 1 cut(s) | 257 |
| MspR9I | CCNGG | 1 cut(s) | 86 |
| MvaI | CCWGG | 1 cut(s) | 86 |
| NlaIII | CATG | 1 cut(s) | 145 |
| NlaIV | GGNNCC | 1 cut(s) | 90 |
| NsbI | TGCGCA | 1 cut(s) | 193 |
| NspI | RCATGY | 1 cut(s) | 145 |
| PciI | ACATGT | 1 cut(s) | 141 |
| PfoI | TCCNGGA | 1 cut(s) | 84 |
| PscI | ACATGT | 1 cut(s) | 141 |
| Psp6I | CCWGG | 1 cut(s) | 84 |
| PspGI | CCWGG | 1 cut(s) | 84 |
| PspN4I | GGNNCC | 1 cut(s) | 90 |
| PspPI | GGNCC | 1 cut(s) | 88 |
| PstNI | CAGNNNCTG | 1 cut(s) | 239 |
| RsaI | GTAC | 1 cut(s) | 63 |
| RsaNI | GTAC | 1 cut(s) | 62 |
| SaqAI | TTAA | 1 cut(s) | 257 |
| Sau96I | GGNCC | 1 cut(s) | 88 |
| ScrFI | CCNGG | 1 cut(s) | 86 |
| SetI | ASST | 7 cut(s) | 41, 59, 128, 164, 189, 241, 281 |
| SfaNI | GCATC | 1 cut(s) | 143 |
| SinI | GGWCC | 1 cut(s) | 88 |
| Sse9I | AATT | 2 cut(s) | 205, 254 |
| SsiI | CCGC | 4 cut(s) | 74, 78, 149, 174 |
| StyD4I | CCNGG | 1 cut(s) | 84 |
| TasI | AATT | 2 cut(s) | 205, 254 |
| Tru1I | TTAA | 1 cut(s) | 257 |
| Tru9I | TTAA | 1 cut(s) | 257 |
| TspDTI | ATGAA | 2 cut(s) | 17, 102 |
| VpaK11BI | GGWCC | 1 cut(s) | 88 |
| XceI | RCATGY | 1 cut(s) | 145 |