Rorug05G0561900

Polysaccharide biosynthesis

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0013606
Physical Location & Seq
Forward (+)
75320807 .. 75324644
3838 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0561900.1

Sequence Viewer

Length: 1647 bp
ATGGCAGACTCCCCCTACCAAGAGCTCCGATTCGGCTTCGAATCGGCTCGGCTCCGTCTCGGCTCGGCGTCTCTAAGCCCCCTCCTATCCTCCCCCTCCACGCGGCGCCTCTCCATTGGAAGCGCCGAGCGGCCGAGTCGCCGATGGCGTAACAATGCGCCCGCGGCGGCGGCTCGACAGCTGTCCTGGATGTCCCTCCAGGGGTGGCTGGCAGACGCGGACGAGGCCACGTCGGCTCGAGCCATAAAGGGGGGCTTGGAGCCGGAGCAAGCCGTGGCTTGGGAGCTCTTTACCCCCATCCAGAGGATTCTCTTCGTCGCCGTTATAAGCGTCGCCGCCGCGGAGTCGAAGAAGAACCGCCTCATTTCGCAGCTGAAGAAATCTGTGGAGTTTAGGGATCAGGTGTTATCGAACATGCAGCAGAAGCTTGACAGTCTATGCGCGCAGATAAGTAACATAAAGGACCACTCTGGAACAGTGACTCCGGTCATGTCCCCAATGAAGAACATAGAATTGCAATCCAATGAAGAGTTTGGTTGTGCTAAAATCAAATTTGTTGATTGCGGTTGTTGGCTTTGTGATCAACATCGTGATCTTTCTGATGGTCTGGTGGGTAATAATGATATGAAAGGATCCAATGGGTATGAGATGCTACAATATAAAATGTCTCTCGAGCATGTTGTAGCAGAGCAAGAGGAGCGCCGCATGTCTGATTTATCAGACATGGCATCAAGTGTCACATCTGCTGCTGACTTCCAGCTGAACAGCTTAGCTATTGAACAAGACATGCACAATCTCAGAAGGGATTGTCAAGAGAAAGATGGGACCATAAGGGAGCTAACCTCTTTGCTCCACTCATCTGAAACTGCTGGTTCAAAGAGGATTGCAGAGTTGGAGGACGTAATACGTAGGAAAAACTCTATAATTACAAGACTAAAGAGGGACATGGCGGTTTTAGAGCAGAAGGTAGTACACCATGCAAGGCTTCGGAGATCCTCTTACTCTTCTTCCTCAGATGATGCAGACTTCGCAGACCCTCTTCCAAAAGTTCCACAAATGGCAGACAATCTTCTTTATGATATGGATAGTACTACTAGCCCTTCGTCTTCCGATTCAGATAGTTCCTCTCCTGTGAACCGAGCATGTGCTCCTGTTTCTAGAACTCCAGAGATTGCTAAAACTCTAGAGACTTCTTCTCAGACTTTTGAGTCTGCTTCAGCAAGCCAGAAATCAGTGCCAGAAAAGGCCTCAATTTCTATGGTGGAACAACCATCTAGCCGGCGCACATCAGTGTCTCCTTTGAAAGAGATAACTATGAATTCAAGGCATTTACGATCAGTGAGCACAAAATCTCGACCAGTGAGTCCAAGATGGCAACCATTGAGTCCAAGGTCCCAATCAGCAAGTCCCTTATCCCCCTTTTCAAAAAGACCTCAACCAGCAAGTCCAAGTTCCCGACCAGCAAGTCCCTTATCCCCCCTACCAAAAAAATCTCAGCCAGCCAGTTCTATAAAAAAATCCAGTACATCACAAACTTCAAGGCCAAGGCAGTTATCAGCTAGTGGGGATTCAAAAATGAGTAAAAGGCGTTCTCTGCCTCAACGAAAGGAATCAAAGGATGCTACTCCACATAAGAGATGGGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Polysacc_synt_4

Protein Analysis

548

Amino Acids

60.5

Weight (kDa)

9.57

Isoelectric Point (pI)

86.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013606)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g05560
malus_domestica MD05G1091700.v1.1
prunus_persica Prupe.8G131100_v2.0.a1
pyrus_communis pycom05g08580 pycom14g01040
rosa_chinensis RchiOBHm_Chr6g0255871
rosa_laevigata RLG00000014807
rosa_multiflora Rmu_sc0001738.1_g000001 Rmu_sc0001738.1_g000002
rosa_roxburghii Rroxscaffold_7G00209580
rosa_rugosa Rorug05G0500200 Rorug05G0561900
rosa_samantha Rh6AG080200 Rh6CG005900 Rh6CG071000 Rh6DG006100 Rh6DG068300
rosa_wichuraiana Rw6G006920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 326
AasI GACNNNNNNGTC 3 cut(s) 1207, 1362, 1464
AccB1I GGYRCC 1 cut(s) 105
AccBSI CCGCTC 1 cut(s) 130
AccII CGCG 5 cut(s) 103, 164, 218, 341, 443
AclWI GGATC 4 cut(s) 405, 627, 640, 987
AcoI YGGCCR 1 cut(s) 131
AcsI RAATTY 2 cut(s) 551, 1318
AcuI CTGAAG 2 cut(s) 395, 1200
AcyI GRCGYC 2 cut(s) 68, 106
AfaI GTAC 3 cut(s) 972, 1090, 1525
AfiI CCNNNNNNNGG 5 cut(s) 102, 201, 249, 279, 303
AgsI TTSAA 7 cut(s) 779, 876, 1303, 1323, 1425, 1539, 1572
AjiI CACGTC 1 cut(s) 231
AjnI CCWGG 2 cut(s) 185, 198
AleI CACNNNNGTG 1 cut(s) 1289
AloI GAACNNNNNNTCC 2 cut(s) 466, 498
Alw21I GWGCWC 4 cut(s) 27, 288, 1150, 1346
Alw26I GTCTC 5 cut(s) 62, 75, 672, 1181, 1299
AlwI GGATC 4 cut(s) 405, 627, 640, 987
Ama87I CYCGRG 2 cut(s) 237, 671
AoxI GGCC 4 cut(s) 131, 225, 1245, 1541
ApeKI GCWGC 3 cut(s) 370, 418, 746
ApoI RAATTY 2 cut(s) 551, 1318
AspLEI GCGC 7 cut(s) 108, 125, 160, 443, 445, 702, 1284
AspS9I GGNCC 3 cut(s) 463, 825, 1392
AsuII TTCGAA 1 cut(s) 39
AvaI CYCGRG 2 cut(s) 237, 671
AvaII GGWCC 3 cut(s) 463, 825, 1392
BamHI GGATCC 1 cut(s) 632
BanI GGYRCC 1 cut(s) 105
BanII GRGCYC 2 cut(s) 27, 288
BbsI GAAGAC 1 cut(s) 1098
Bbv12I GWGCWC 4 cut(s) 27, 288, 1150, 1346
BbvI GCAGC 3 cut(s) 382, 430, 733
BccI CCATC 7 cut(s) 138, 305, 596, 815, 1279, 1365, 1632
BceAI ACGGC 2 cut(s) 257, 305
BciT130I CCWGG 2 cut(s) 187, 200
BclI TGATCA 1 cut(s) 580
BcoDI GTCTC 5 cut(s) 62, 75, 672, 1181, 1299
BfaI CTAG 5 cut(s) 1095, 1158, 1184, 1275, 1560
BfoI RGCGCY 3 cut(s) 109, 126, 703
BglI GCCNNNNNGGC 1 cut(s) 233
BlpI GCTNAGC 1 cut(s) 769
BmcAI AGTACT 1 cut(s) 1090
Bme1390I CCNGG 2 cut(s) 187, 200
Bme18I GGWCC 3 cut(s) 463, 825, 1392
BmeT110I CYCGRG 2 cut(s) 237, 671
BmgBI CACGTC 1 cut(s) 231
BmgT120I GGNCC 3 cut(s) 463, 825, 1392
BmiI GGNNCC 6 cut(s) 53, 107, 261, 634, 826, 1394
BmrFI CCNGG 2 cut(s) 187, 200
BmsI GCATC 4 cut(s) 639, 737, 1009, 1609
BoxI GACNNNNGTC 2 cut(s) 181, 485
BpiI GAAGAC 1 cut(s) 1098
BplI GAGNNNNNCTC 2 cut(s) 827, 859
BpmI CTGGAG 2 cut(s) 182, 1149
Bpu1102I GCTNAGC 1 cut(s) 769
Bpu14I TTCGAA 1 cut(s) 39
BsaAI YACGTR 1 cut(s) 908
BsaBI GATNNNNATC 1 cut(s) 585
BsaHI GRCGYC 2 cut(s) 68, 106
BsaJI CCNNGG 6 cut(s) 162, 199, 273, 339, 1388, 1544
BsaWI WCCGGW 1 cut(s) 484
BsaXI ACNNNNNCTCC 2 cut(s) 466, 496
Bsc4I CCNNNNNNNGG 5 cut(s) 102, 201, 249, 279, 303
Bse118I RCCGGY 1 cut(s) 1278
Bse1I ACTGG 3 cut(s) 1358, 1503, 1521
Bse8I GATNNNNATC 1 cut(s) 585
BseBI CCWGG 2 cut(s) 187, 200
BseDI CCNNGG 6 cut(s) 162, 199, 273, 339, 1388, 1544
BseGI GGATG 3 cut(s) 195, 297, 1624
BseJI GATNNNNATC 1 cut(s) 585
BseLI CCNNNNNNNGG 5 cut(s) 102, 201, 249, 279, 303
BseMII CTCAG 4 cut(s) 811, 1026, 1211, 1508
BseNI ACTGG 3 cut(s) 1358, 1503, 1521
BsePI GCGCGC 1 cut(s) 441
BseRI GAGGAG 1 cut(s) 710
BseX3I CGGCCG 1 cut(s) 131
BseXI GCAGC 3 cut(s) 382, 430, 733
Bsh1236I CGCG 5 cut(s) 103, 164, 218, 341, 443
Bsh1285I CGRYCG 1 cut(s) 134
BshFI GGCC 4 cut(s) 133, 227, 1247, 1543
BshNI GGYRCC 1 cut(s) 105
BsiEI CGRYCG 1 cut(s) 134
BsiHKAI GWGCWC 4 cut(s) 27, 288, 1150, 1346
BsiHKCI CYCGRG 2 cut(s) 237, 671
BsiSI CCGG 3 cut(s) 263, 485, 1279
BslFI GGGAC 7 cut(s) 178, 478, 838, 956, 1378, 1392, 1452
BslI CCNNNNNNNGG 5 cut(s) 102, 201, 249, 279, 303
BsmAI GTCTC 5 cut(s) 62, 75, 672, 1181, 1299
BsmBI CGTCTC 2 cut(s) 62, 75
BsmFI GGGAC 7 cut(s) 178, 478, 838, 956, 1378, 1392, 1452
BsnI GGCC 4 cut(s) 133, 227, 1247, 1543
BsoBI CYCGRG 2 cut(s) 237, 671
Bsp119I TTCGAA 1 cut(s) 39
Bsp1286I GDGCHC 4 cut(s) 27, 288, 1150, 1346
Bsp143I GATC 6 cut(s) 397, 580, 592, 632, 992, 1334
Bsp1720I GCTNAGC 1 cut(s) 769
BspANI GGCC 4 cut(s) 133, 227, 1247, 1543
BspCNI CTCAG 4 cut(s) 810, 1025, 1210, 1507
BspFNI CGCG 5 cut(s) 103, 164, 218, 341, 443
BspLI GGNNCC 6 cut(s) 53, 107, 261, 634, 826, 1394
BspPI GGATC 4 cut(s) 405, 627, 640, 987
BspT104I TTCGAA 1 cut(s) 39
BspT107I GGYRCC 1 cut(s) 105
BsrBI CCGCTC 1 cut(s) 130
BsrFI RCCGGY 1 cut(s) 1278
BsrI ACTGG 3 cut(s) 1358, 1503, 1521
BssAI RCCGGY 1 cut(s) 1278
BssECI CCNNGG 6 cut(s) 162, 199, 273, 339, 1388, 1544
BssHII GCGCGC 1 cut(s) 441
BssMI GATC 6 cut(s) 397, 580, 592, 632, 992, 1334
BssNI GRCGYC 2 cut(s) 68, 106
BssT1I CCWWGG 2 cut(s) 1388, 1544
Bst2UI CCWGG 2 cut(s) 187, 200
Bst4CI ACNGT 2 cut(s) 434, 478
Bst6I CTCTTC 4 cut(s) 317, 522, 1009, 1044
BstACI GRCGYC 2 cut(s) 68, 106
BstBAI YACGTR 1 cut(s) 908
BstBI TTCGAA 1 cut(s) 39
BstC8I GCNNGC 7 cut(s) 162, 210, 270, 443, 1222, 1280, 1500
BstDEI CTNAG 7 cut(s) 74, 769, 797, 1012, 1197, 1494, 1644
BstDSI CCRYGG 3 cut(s) 162, 273, 339
BstF5I GGATG 3 cut(s) 195, 297, 1624
BstFNI CGCG 5 cut(s) 103, 164, 218, 341, 443
BstH2I RGCGCY 3 cut(s) 109, 126, 703
BstHHI GCGC 7 cut(s) 108, 125, 160, 443, 445, 702, 1284
BstKTI GATC 6 cut(s) 400, 583, 595, 635, 995, 1337
BstMAI GTCTC 5 cut(s) 62, 75, 672, 1181, 1299
BstMBI GATC 6 cut(s) 397, 580, 592, 632, 992, 1334
BstMCI CGRYCG 1 cut(s) 134
BstMWI GCNNNNNNNGC 8 cut(s) 164, 170, 224, 233, 424, 697, 1028, 1594
BstNI CCWGG 2 cut(s) 187, 200
BstNSI RCATGY 5 cut(s) 418, 680, 709, 790, 1146
BstPAI GACNNNNGTC 2 cut(s) 181, 485
BstSCI CCNGG 2 cut(s) 185, 198
BstSNI TACGTA 1 cut(s) 908
BstUI CGCG 5 cut(s) 103, 164, 218, 341, 443
BstV1I GCAGC 3 cut(s) 382, 430, 733
BstV2I GAAGAC 1 cut(s) 1098
BstX2I RGATCY 2 cut(s) 632, 992
BstYI RGATCY 2 cut(s) 632, 992
BstZI CGGCCG 1 cut(s) 131
BsuRI GGCC 4 cut(s) 133, 227, 1247, 1543
BtgI CCRYGG 3 cut(s) 162, 273, 339
BtrI CACGTC 1 cut(s) 231
BtsCI GGATG 3 cut(s) 195, 297, 1624
BtsIMutI CAGTG 5 cut(s) 483, 1239, 1296, 1344, 1365
Cac8I GCNNGC 7 cut(s) 162, 210, 270, 443, 1222, 1280, 1500
CfoI GCGC 7 cut(s) 108, 125, 160, 443, 445, 702, 1284
Cfr10I RCCGGY 1 cut(s) 1278
Cfr13I GGNCC 3 cut(s) 463, 825, 1392
Cfr42I CCGCGG 2 cut(s) 165, 342
CseI GACGC 3 cut(s) 57, 224, 319
Csp6I GTAC 3 cut(s) 971, 1089, 1524
CviAII CATG 9 cut(s) 415, 490, 677, 706, 724, 787, 946, 977, 1143
CviQI GTAC 3 cut(s) 971, 1089, 1524
DdeI CTNAG 7 cut(s) 74, 769, 797, 1012, 1197, 1494, 1644
DinI GGCGCC 1 cut(s) 107
DpnI GATC 6 cut(s) 399, 582, 594, 634, 994, 1336
DpnII GATC 6 cut(s) 397, 580, 592, 632, 992, 1334
DrdI GACNNNNNNGTC 3 cut(s) 1207, 1362, 1464
DseDI GACNNNNNNGTC 3 cut(s) 1207, 1362, 1464
EaeI YGGCCR 1 cut(s) 131
EagI CGGCCG 1 cut(s) 131
Eam1104I CTCTTC 4 cut(s) 317, 522, 1009, 1044
EarI CTCTTC 4 cut(s) 317, 522, 1009, 1044
Ecl136II GAGCTC 2 cut(s) 25, 286
EclXI CGGCCG 1 cut(s) 131
Eco105I TACGTA 1 cut(s) 908
Eco130I CCWWGG 2 cut(s) 1388, 1544
Eco147I AGGCCT 1 cut(s) 1247
Eco24I GRGCYC 2 cut(s) 27, 288
Eco47I GGWCC 3 cut(s) 463, 825, 1392
Eco52I CGGCCG 1 cut(s) 131
Eco53kI GAGCTC 2 cut(s) 25, 286
Eco57I CTGAAG 2 cut(s) 395, 1200
Eco88I CYCGRG 2 cut(s) 237, 671
EcoICRI GAGCTC 2 cut(s) 25, 286
EcoO109I RGGNCCY 1 cut(s) 1392
EcoRI GAATTC 1 cut(s) 1318
EcoRII CCWGG 2 cut(s) 185, 198
EcoT14I CCWWGG 2 cut(s) 1388, 1544
EcoT38I GRGCYC 2 cut(s) 27, 288
EgeI GGCGCC 1 cut(s) 107
EheI GGCGCC 1 cut(s) 107
ErhI CCWWGG 2 cut(s) 1388, 1544
Esp3I CGTCTC 2 cut(s) 62, 75
FaeI CATG 9 cut(s) 418, 493, 680, 709, 727, 790, 949, 980, 1146
FalI AAGNNNNNCTT 2 cut(s) 239, 271
FaqI GGGAC 7 cut(s) 178, 478, 838, 956, 1378, 1392, 1452
FatI CATG 9 cut(s) 414, 489, 676, 705, 723, 786, 945, 976, 1142
FauI CCCGC 1 cut(s) 169
FbaI TGATCA 1 cut(s) 580
FokI GGATG 3 cut(s) 202, 284, 1631
FriOI GRGCYC 2 cut(s) 27, 288
FspBI CTAG 5 cut(s) 1095, 1158, 1184, 1275, 1560
GlaI GCGC 7 cut(s) 107, 124, 159, 442, 444, 701, 1283
GsuI CTGGAG 2 cut(s) 182, 1149
HaeII RGCGCY 3 cut(s) 109, 126, 703
HaeIII GGCC 4 cut(s) 133, 227, 1247, 1543
HapII CCGG 3 cut(s) 263, 485, 1279
HgaI GACGC 3 cut(s) 57, 224, 319
HhaI GCGC 7 cut(s) 108, 125, 160, 443, 445, 702, 1284
Hin1I GRCGYC 2 cut(s) 68, 106
Hin1II CATG 9 cut(s) 418, 493, 680, 709, 727, 790, 949, 980, 1146
Hin6I GCGC 7 cut(s) 106, 123, 158, 441, 443, 700, 1282
HinP1I GCGC 7 cut(s) 106, 123, 158, 441, 443, 700, 1282
HindIII AAGCTT 1 cut(s) 425
HpaII CCGG 3 cut(s) 263, 485, 1279
Hpy166II GTNNAC 2 cut(s) 973, 1135
Hpy8I GTNNAC 2 cut(s) 973, 1135
Hpy99I CGWCG 3 cut(s) 235, 320, 335
HpyAV CCTTC 3 cut(s) 795, 958, 1110
HpyCH4III ACNGT 2 cut(s) 434, 478
HpyCH4IV ACGT 3 cut(s) 230, 900, 907
HpyCH4V TGCA 6 cut(s) 418, 517, 790, 887, 980, 1022
HpyF10VI GCNNNNNNNGC 8 cut(s) 164, 170, 224, 233, 424, 697, 1028, 1594
HpyF3I CTNAG 7 cut(s) 74, 769, 797, 1012, 1197, 1494, 1644
HpySE526I ACGT 3 cut(s) 230, 900, 907
Hsp92I GRCGYC 2 cut(s) 68, 106
Hsp92II CATG 9 cut(s) 418, 493, 680, 709, 727, 790, 949, 980, 1146
HspAI GCGC 7 cut(s) 106, 123, 158, 441, 443, 700, 1282
KasI GGCGCC 1 cut(s) 105
KroI GCCGGC 1 cut(s) 1278
KroNI GCCGGC 1 cut(s) 1280
Ksp22I TGATCA 1 cut(s) 580
KspI CCGCGG 2 cut(s) 165, 342
Kzo9I GATC 6 cut(s) 397, 580, 592, 632, 992, 1334
LmnI GCTCC 9 cut(s) 30, 57, 259, 265, 283, 697, 835, 855, 1153
Lsp1109I GCAGC 3 cut(s) 382, 430, 733
LweI GCATC 4 cut(s) 639, 737, 1009, 1609
MaeI CTAG 5 cut(s) 1095, 1158, 1184, 1275, 1560
MaeII ACGT 3 cut(s) 230, 900, 907
MaeIII GTNAC 4 cut(s) 149, 452, 478, 736
MalI GATC 6 cut(s) 399, 582, 594, 634, 994, 1336
MbiI CCGCTC 1 cut(s) 130
MboI GATC 6 cut(s) 397, 580, 592, 632, 992, 1334
MflI RGATCY 2 cut(s) 632, 992
MhlI GDGCHC 4 cut(s) 27, 288, 1150, 1346
MluCI AATT 5 cut(s) 512, 551, 924, 1251, 1318
Mly113I GGCGCC 1 cut(s) 106
MlyI GAGTC 7 cut(s) 2, 145, 353, 475, 1217, 1372, 1393
MmeI TCCRAC 1 cut(s) 873
MroNI GCCGGC 1 cut(s) 1278
MslI CAYNNNNRTG 1 cut(s) 1289
MspA1I CMGCKG 5 cut(s) 164, 181, 341, 373, 760
MspI CCGG 3 cut(s) 263, 485, 1279
MspR9I CCNGG 2 cut(s) 187, 200
MvaI CCWGG 2 cut(s) 187, 200
MvnI CGCG 5 cut(s) 103, 164, 218, 341, 443
MwoI GCNNNNNNNGC 8 cut(s) 164, 170, 224, 233, 424, 697, 1028, 1594
NaeI GCCGGC 1 cut(s) 1280
NarI GGCGCC 1 cut(s) 106
NdeII GATC 6 cut(s) 397, 580, 592, 632, 992, 1334
NgoMIV GCCGGC 1 cut(s) 1278
NlaIII CATG 9 cut(s) 418, 493, 680, 709, 727, 790, 949, 980, 1146
NlaIV GGNNCC 6 cut(s) 53, 107, 261, 634, 826, 1394
NmeAIII GCCGAG 5 cut(s) 28, 39, 44, 151, 159
NmuCI GTSAC 2 cut(s) 478, 736
NspI RCATGY 5 cut(s) 418, 680, 709, 790, 1146
NspV TTCGAA 1 cut(s) 39
OliI CACNNNNGTG 1 cut(s) 1289
PaeR7I CTCGAG 2 cut(s) 237, 671
PauI GCGCGC 1 cut(s) 441
PceI AGGCCT 1 cut(s) 1247
PcsI WCGNNNNNNNCGW 1 cut(s) 145
PdiI GCCGGC 1 cut(s) 1280
PfeI GAWTC 6 cut(s) 30, 41, 307, 1112, 1568, 1610
PfoI TCCNGGA 1 cut(s) 185
PleI GAGTC 7 cut(s) 2, 144, 352, 475, 1216, 1371, 1392
PluTI GGCGCC 1 cut(s) 109
PpsI GAGTC 7 cut(s) 2, 144, 352, 475, 1216, 1371, 1392
Ppu21I YACGTR 1 cut(s) 908
PpuMI RGGWCCY 1 cut(s) 1392
PshAI GACNNNNGTC 2 cut(s) 181, 485
PsiI TTATAA 1 cut(s) 326
Psp124BI GAGCTC 2 cut(s) 27, 288
Psp5II RGGWCCY 1 cut(s) 1392
Psp6I CCWGG 2 cut(s) 185, 198
PspGI CCWGG 2 cut(s) 185, 198
PspN4I GGNNCC 6 cut(s) 53, 107, 261, 634, 826, 1394
PspPI GGNCC 3 cut(s) 463, 825, 1392
PspPPI RGGWCCY 1 cut(s) 1392
PspXI VCTCGAGB 1 cut(s) 237
PsrI GAACNNNNNNTAC 2 cut(s) 1573, 1605
PsuI RGATCY 2 cut(s) 632, 992
PteI GCGCGC 1 cut(s) 441
PvuII CAGCTG 3 cut(s) 181, 373, 760
RsaI GTAC 3 cut(s) 972, 1090, 1525
RsaNI GTAC 3 cut(s) 971, 1089, 1524
RseI CAYNNNNRTG 1 cut(s) 1289
SacI GAGCTC 2 cut(s) 27, 288
SacII CCGCGG 2 cut(s) 165, 342
Sau3AI GATC 6 cut(s) 397, 580, 592, 632, 992, 1334
Sau96I GGNCC 3 cut(s) 463, 825, 1392
ScaI AGTACT 1 cut(s) 1090
SchI GAGTC 7 cut(s) 2, 145, 353, 475, 1217, 1372, 1393
ScrFI CCNGG 2 cut(s) 187, 200
SduI GDGCHC 4 cut(s) 27, 288, 1150, 1346
SfaNI GCATC 4 cut(s) 639, 737, 1009, 1609
SfoI GGCGCC 1 cut(s) 107
Sfr274I CTCGAG 2 cut(s) 237, 671
Sfr303I CCGCGG 2 cut(s) 165, 342
SfuI TTCGAA 1 cut(s) 39
SgrBI CCGCGG 2 cut(s) 165, 342
SinI GGWCC 3 cut(s) 463, 825, 1392
SlaI CTCGAG 2 cut(s) 237, 671
SmiMI CAYNNNNRTG 1 cut(s) 1289
SmlI CTYRAG 2 cut(s) 237, 671
SmoI CTYRAG 2 cut(s) 237, 671
SnaBI TACGTA 1 cut(s) 908
Sse9I AATT 5 cut(s) 512, 551, 924, 1251, 1318
SseBI AGGCCT 1 cut(s) 1247
SspDI GGCGCC 1 cut(s) 105
SspMI CTAG 5 cut(s) 1095, 1158, 1184, 1275, 1560
SstI GAGCTC 2 cut(s) 27, 288
StuI AGGCCT 1 cut(s) 1247
StyD4I CCNGG 2 cut(s) 185, 198
StyI CCWWGG 2 cut(s) 1388, 1544
TaaI ACNGT 2 cut(s) 434, 478
TaiI ACGT 3 cut(s) 233, 903, 910
TaqI TCGA 7 cut(s) 39, 175, 238, 347, 410, 672, 1354
TasI AATT 5 cut(s) 512, 551, 924, 1251, 1318
TatI WGTACW 3 cut(s) 970, 1088, 1523
TauI GCSGC 8 cut(s) 106, 133, 167, 170, 173, 338, 341, 705
TfiI GAWTC 6 cut(s) 30, 41, 307, 1112, 1568, 1610
TscAI CASTG 5 cut(s) 483, 1239, 1296, 1344, 1365
TseFI GTSAC 2 cut(s) 478, 736
TseI GCWGC 3 cut(s) 370, 418, 746
Tsp45I GTSAC 2 cut(s) 478, 736
TspDTI ATGAA 4 cut(s) 515, 540, 641, 1331
TspGWI ACGGA 1 cut(s) 44
TspRI CASTG 5 cut(s) 483, 1239, 1296, 1344, 1365
VpaK11BI GGWCC 3 cut(s) 463, 825, 1392
XapI RAATTY 2 cut(s) 551, 1318
XbaI TCTAGA 2 cut(s) 1157, 1183
XceI RCATGY 5 cut(s) 418, 680, 709, 790, 1146
XcmI CCANNNNNNNNNTGG 1 cut(s) 1635
XhoI CTCGAG 2 cut(s) 237, 671
XspI CTAG 5 cut(s) 1095, 1158, 1184, 1275, 1560
ZrmI AGTACT 1 cut(s) 1090
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.