pycom14g01790

Monodehydroascorbate

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Forward (+)
1323050 .. 1326588
3539 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1398 bp
ATGTCATCGCATTCCTCTCACTTCTTCCCCAGCAACATCCAAAGCGAAGAAGAAGAATCGAAACGCGCGTTTTGCCTTATCGATCAGCTATCAATGGGGGCGAAGAACTTCAAGTACGTGATCCTCGGCGGCGGTGTCTCAGCTGGATATGCAGCTCGGCAGTTTGCCAAACAGGGCCTTAAGCCAGGCGAACTAGCGGTCATTTCCAAGGAGGCGGTTGCTCCCTATGAACGTCCTGCACTCAGCAAGGCTTATCTCTTCCCCGAGTCTCCTGCTAGACTTCCTGGGTTTCATGTCTGCGTTGGAAGTGGAGGAGAGAGATTGCTTCCTGACTGGTACAAGGAGAAAGGGATCGAATTGATTCTCAACACTGAAATAGTTAAAGCCGATCTTCCTGGGAAGACTCTTGTCAGTGGATCTGGGGAATCCTTCAAGTACCAGACTCTCGTCATTGCCACTGGCTCATCTGTTATAAGATTGACAGATTTTGGTGTCAAAGGAGCTGATGCCAAAAAAATCTTCTATTTGAGAGAAATTGATGATGCCGATAAACTCTACGAAGCAATTAAGTCAAAAAAGAATGGGAAGGCTGTGATTGTTGGAGGAGGGTACATTGGTCTCGAGCTTGGTGCAGTTTTGAAAATTAACAATTTAGATGTTAAAATGGTTTACCCTGAACCATGGTGCATGCCTCGACTTTTCACTTCTGGTATTGCTGCTTTTTATGAGGGCTATTATCAAAACAAGGGAGTTAAAATCATCAAGGGAACAGTTGCGACTGGATTTACTGCTGACTCAAATGGAGAGGTCAAGGAAGTGCACCTAAAGGATGGCACCGTGCTTGAAGCTGACATCGTTGTTGTCGGTGTTGGGGGCAGGCCCCTGACAACATTGTTCAAAGGACAAGTCGAAGAGGAGAAAGGTGGCATTAAGACGGATGCATTCTTCAAAACAAGTGTTCCGGATGTATATGCTGTGGGCGATGTCGCCACTTTTCCTTTGAAGTTGTACAATGAGATTAGAAGAGTTGAGCATGTCGATCATGCACGCAAATCTGCTGAGCAGGCTGTAAAGGCCATCAAGGCAAGCGAGGAGGGGAAGACAGTTGAGGAATACGACTACCTTCCATACTTCTATTCGCGCTCCTTCGATCTTTCATGGCAATTCTACGGTGACAATGTTGGTGAAACCGTGCTCTTTGGAGACAATAATCCCGCGACACCAAAGGCGAAGTTTGGAACATACTGGATTAAAGACGGGAAGGTGGTCGGAGCATTTCTGGAAGGCGGCACACCCGAGGAAAACCAGGCTATTGCCAAGGTTGCAAAGGCCCAACCTCCGGTTGCGAGTTTAGATCAGCTTGCTGCGGAAGGTCTCTCTTTCGCTTGTAAGATGTAA

Protein Analysis

466

Amino Acids

50.56

Weight (kDa)

6.38

Isoelectric Point (pI)

35.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pyr_redox_2 PF07992 37 - 353 3.3e-60 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox PF00070 196 - 278 2.2e-13 Pyridine nucleotide-disulphide oxidoreductase
MDHAR3-like_C PF21791 375 - 462 1.3e-42 Monodehydroascorbate reductase 3-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 473
AccB1I GGYRCC 1 cut(s) 833
AccII CGCG 4 cut(s) 66, 68, 1141, 1217
AccIII TCCGGA 1 cut(s) 961
AciI CCGC 7 cut(s) 129, 132, 197, 215, 1215, 1287, 1367
AclWI GGATC 3 cut(s) 115, 359, 424
AfaI GTAC 5 cut(s) 116, 338, 437, 611, 1010
AfiI CCNNNNNNNGG 1 cut(s) 1339
AflII CTTAAG 1 cut(s) 179
AgsI TTSAA 7 cut(s) 112, 433, 640, 845, 898, 949, 1003
AjnI CCWGG 4 cut(s) 184, 283, 394, 1305
AjuI GAANNNNNNNTTGG 2 cut(s) 503, 535
AluBI AGCT 7 cut(s) 88, 143, 155, 503, 625, 848, 1360
AluI AGCT 7 cut(s) 88, 143, 155, 503, 625, 848, 1360
Alw21I GWGCWC 2 cut(s) 822, 1197
Alw26I GTCTC 5 cut(s) 142, 273, 623, 1197, 1379
Alw44I GTGCAC 1 cut(s) 818
AlwI GGATC 3 cut(s) 115, 359, 424
Ama87I CYCGRG 3 cut(s) 263, 620, 1295
Aor13HI TCCGGA 1 cut(s) 961
AoxI GGCC 4 cut(s) 175, 878, 1074, 1329
ApaLI GTGCAC 1 cut(s) 818
ApeKI GCWGC 3 cut(s) 152, 716, 1364
ArsI GACNNNNNNTTYG 4 cut(s) 183, 215, 891, 923
Asp700I GAANNNNTTC 2 cut(s) 107, 360
AspLEI GCGC 2 cut(s) 68, 1143
AspS9I GGNCC 3 cut(s) 175, 879, 1330
AsuHPI GGTGA 2 cut(s) 1184, 1196
AvaI CYCGRG 3 cut(s) 263, 620, 1295
BaeGI GKGCMC 1 cut(s) 822
BaeI ACNNNNGTAYC 2 cut(s) 601, 634
BanI GGYRCC 1 cut(s) 833
BbsI GAAGAC 2 cut(s) 407, 1106
Bbv12I GWGCWC 2 cut(s) 822, 1197
BbvI GCAGC 3 cut(s) 164, 703, 1351
BccI CCATC 2 cut(s) 824, 1085
BcgI CGANNNNNNTGC 4 cut(s) 254, 288, 611, 645
BciT130I CCWGG 4 cut(s) 186, 285, 396, 1307
BcoDI GTCTC 5 cut(s) 142, 273, 623, 1197, 1379
BfaI CTAG 2 cut(s) 194, 276
BfrI CTTAAG 1 cut(s) 179
BglI GCCNNNNNGGC 1 cut(s) 1082
BisI GCNGC 5 cut(s) 130, 153, 717, 1288, 1365
BlpI GCTNAGC 1 cut(s) 1059
BlsI GCNGC 5 cut(s) 131, 154, 718, 1289, 1366
Bme1390I CCNGG 4 cut(s) 186, 285, 396, 1307
BmeT110I CYCGRG 3 cut(s) 263, 620, 1295
BmgT120I GGNCC 3 cut(s) 175, 879, 1330
BmiI GGNNCC 2 cut(s) 835, 881
BmrFI CCNGG 4 cut(s) 186, 285, 396, 1307
BmsI GCATC 3 cut(s) 496, 532, 928
BoxI GACNNNNGTC 2 cut(s) 407, 446
BpiI GAAGAC 2 cut(s) 407, 1106
Bpu1102I GCTNAGC 1 cut(s) 1059
Bsa29I ATCGAT 1 cut(s) 81
BsaAI YACGTR 1 cut(s) 118
BsaI GGTCTC 2 cut(s) 623, 1379
BsaJI CCNNGG 7 cut(s) 124, 207, 284, 395, 680, 1296, 1317
BsaWI WCCGGW 2 cut(s) 961, 1339
Bsc4I CCNNNNNNNGG 1 cut(s) 1339
Bse1I ACTGG 4 cut(s) 338, 463, 784, 1250
Bse3DI GCAATG 1 cut(s) 450
BseAI TCCGGA 1 cut(s) 961
BseBI CCWGG 4 cut(s) 186, 285, 396, 1307
BseCI ATCGAT 1 cut(s) 81
BseDI CCNNGG 7 cut(s) 124, 207, 284, 395, 680, 1296, 1317
BseGI GGATG 4 cut(s) 36, 835, 943, 970
BseLI CCNNNNNNNGG 1 cut(s) 1339
BseMI GCAATG 1 cut(s) 450
BseMII CTCAG 3 cut(s) 153, 256, 1050
BseNI ACTGG 4 cut(s) 338, 463, 784, 1250
BseRI GAGGAG 4 cut(s) 327, 618, 929, 1106
BseSI GKGCMC 1 cut(s) 822
BseXI GCAGC 3 cut(s) 164, 703, 1351
BseYI CCCAGC 1 cut(s) 29
BsgI GTGCAG 2 cut(s) 222, 651
Bsh1236I CGCG 4 cut(s) 66, 68, 1141, 1217
BshFI GGCC 4 cut(s) 177, 880, 1076, 1331
BshNI GGYRCC 1 cut(s) 833
BshVI ATCGAT 1 cut(s) 81
BsiHKAI GWGCWC 2 cut(s) 822, 1197
BsiHKCI CYCGRG 3 cut(s) 263, 620, 1295
BsiSI CCGG 2 cut(s) 962, 1340
BslI CCNNNNNNNGG 1 cut(s) 1339
BsmAI GTCTC 5 cut(s) 142, 273, 623, 1197, 1379
BsmI GAATGC 2 cut(s) 10, 941
BsnI GGCC 4 cut(s) 177, 880, 1076, 1331
Bso31I GGTCTC 2 cut(s) 623, 1379
BsoBI CYCGRG 3 cut(s) 263, 620, 1295
Bsp1286I GDGCHC 2 cut(s) 822, 1197
Bsp13I TCCGGA 1 cut(s) 961
Bsp1407I TGTACA 1 cut(s) 1008
Bsp143I GATC 8 cut(s) 82, 120, 351, 388, 416, 1039, 1150, 1354
Bsp1720I GCTNAGC 1 cut(s) 1059
Bsp19I CCATGG 1 cut(s) 680
BspACI CCGC 7 cut(s) 129, 132, 197, 215, 1215, 1287, 1367
BspANI GGCC 4 cut(s) 177, 880, 1076, 1331
BspCNI CTCAG 3 cut(s) 152, 255, 1051
BspDI ATCGAT 1 cut(s) 81
BspEI TCCGGA 1 cut(s) 961
BspFNI CGCG 4 cut(s) 66, 68, 1141, 1217
BspLI GGNNCC 2 cut(s) 835, 881
BspPI GGATC 3 cut(s) 115, 359, 424
BspT107I GGYRCC 1 cut(s) 833
BspTI CTTAAG 1 cut(s) 179
BspTNI GGTCTC 2 cut(s) 623, 1379
BsrDI GCAATG 1 cut(s) 450
BsrGI TGTACA 1 cut(s) 1008
BsrI ACTGG 4 cut(s) 338, 463, 784, 1250
BssECI CCNNGG 7 cut(s) 124, 207, 284, 395, 680, 1296, 1317
BssMI GATC 8 cut(s) 82, 120, 351, 388, 416, 1039, 1150, 1354
BssT1I CCWWGG 3 cut(s) 207, 680, 1317
Bst2UI CCWGG 4 cut(s) 186, 285, 396, 1307
Bst4CI ACNGT 5 cut(s) 772, 838, 1105, 1172, 1192
Bst6I CTCTTC 3 cut(s) 263, 906, 1018
BstAFI CTTAAG 1 cut(s) 179
BstAUI TGTACA 1 cut(s) 1008
BstBAI YACGTR 1 cut(s) 118
BstC8I GCNNGC 6 cut(s) 689, 878, 1048, 1065, 1087, 1362
BstDEI CTNAG 3 cut(s) 139, 242, 1059
BstDSI CCRYGG 1 cut(s) 680
BstF5I GGATG 4 cut(s) 36, 835, 943, 970
BstFNI CGCG 4 cut(s) 66, 68, 1141, 1217
BstHHI GCGC 2 cut(s) 68, 1143
BstKTI GATC 8 cut(s) 85, 123, 354, 391, 419, 1042, 1153, 1357
BstMAI GTCTC 5 cut(s) 142, 273, 623, 1197, 1379
BstMBI GATC 8 cut(s) 82, 120, 351, 388, 416, 1039, 1150, 1354
BstMWI GCNNNNNNNGC 6 cut(s) 72, 149, 1064, 1073, 1082, 1322
BstNI CCWGG 4 cut(s) 186, 285, 396, 1307
BstNSI RCATGY 2 cut(s) 691, 1037
BstPAI GACNNNNGTC 2 cut(s) 407, 446
BstSCI CCNGG 4 cut(s) 184, 283, 394, 1305
BstSLI GKGCMC 1 cut(s) 822
BstUI CGCG 4 cut(s) 66, 68, 1141, 1217
BstV1I GCAGC 3 cut(s) 164, 703, 1351
BstV2I GAAGAC 2 cut(s) 407, 1106
BstX2I RGATCY 1 cut(s) 416
BstYI RGATCY 1 cut(s) 416
Bsu15I ATCGAT 1 cut(s) 81
BsuRI GGCC 4 cut(s) 177, 880, 1076, 1331
BsuTUI ATCGAT 1 cut(s) 81
BtgI CCRYGG 1 cut(s) 680
BtgZI GCGATG 1 cut(s) 996
BtsCI GGATG 4 cut(s) 36, 835, 943, 970
BtsIMutI CAGTG 3 cut(s) 369, 418, 456
Cac8I GCNNGC 6 cut(s) 689, 878, 1048, 1065, 1087, 1362
CfoI GCGC 2 cut(s) 68, 1143
Cfr13I GGNCC 3 cut(s) 175, 879, 1330
ClaI ATCGAT 1 cut(s) 81
Csp6I GTAC 5 cut(s) 115, 337, 436, 610, 1009
CviAII CATG 6 cut(s) 293, 681, 688, 1034, 1043, 1158
CviQI GTAC 5 cut(s) 115, 337, 436, 610, 1009
DdeI CTNAG 3 cut(s) 139, 242, 1059
DpnI GATC 8 cut(s) 84, 122, 353, 390, 418, 1041, 1152, 1356
DpnII GATC 8 cut(s) 82, 120, 351, 388, 416, 1039, 1150, 1354
Eam1104I CTCTTC 3 cut(s) 263, 906, 1018
EarI CTCTTC 3 cut(s) 263, 906, 1018
Eco130I CCWWGG 3 cut(s) 207, 680, 1317
Eco31I GGTCTC 2 cut(s) 623, 1379
Eco88I CYCGRG 3 cut(s) 263, 620, 1295
EcoO109I RGGNCCY 2 cut(s) 175, 879
EcoRII CCWGG 4 cut(s) 184, 283, 394, 1305
EcoT14I CCWWGG 3 cut(s) 207, 680, 1317
EcoT22I ATGCAT 1 cut(s) 943
ErhI CCWWGG 3 cut(s) 207, 680, 1317
FaeI CATG 6 cut(s) 296, 684, 691, 1037, 1046, 1161
FalI AAGNNNNNCTT 2 cut(s) 375, 407
FatI CATG 6 cut(s) 292, 680, 687, 1033, 1042, 1157
FauI CCCGC 1 cut(s) 1222
Fnu4HI GCNGC 5 cut(s) 130, 153, 717, 1288, 1365
FokI GGATG 4 cut(s) 23, 842, 950, 977
Fsp4HI GCNGC 5 cut(s) 130, 153, 717, 1288, 1365
FspBI CTAG 2 cut(s) 194, 276
GlaI GCGC 2 cut(s) 67, 1142
GluI GCNGC 5 cut(s) 130, 153, 717, 1288, 1365
GsaI CCCAGC 1 cut(s) 33
HaeIII GGCC 4 cut(s) 177, 880, 1076, 1331
HapII CCGG 2 cut(s) 962, 1340
HhaI GCGC 2 cut(s) 68, 1143
Hin1II CATG 6 cut(s) 296, 684, 691, 1037, 1046, 1161
Hin6I GCGC 2 cut(s) 66, 1141
HinP1I GCGC 2 cut(s) 66, 1141
HinfI GANTC 7 cut(s) 56, 266, 361, 403, 425, 442, 794
HpaII CCGG 2 cut(s) 962, 1340
HphI GGTGA 2 cut(s) 1184, 1196
Hpy166II GTNNAC 2 cut(s) 670, 820
Hpy188I TCNGA 1 cut(s) 1271
Hpy188III TCNNGA 4 cut(s) 329, 620, 962, 1280
Hpy8I GTNNAC 2 cut(s) 670, 820
HpyAV CCTTC 7 cut(s) 439, 580, 1133, 1156, 1255, 1277, 1364
HpyCH4III ACNGT 5 cut(s) 772, 838, 1105, 1172, 1192
HpyCH4IV ACGT 2 cut(s) 117, 232
HpyCH4V TGCA 8 cut(s) 152, 239, 632, 687, 820, 941, 1046, 1325
HpyF10VI GCNNNNNNNGC 6 cut(s) 72, 149, 1064, 1073, 1082, 1322
HpyF3I CTNAG 3 cut(s) 139, 242, 1059
HpySE526I ACGT 2 cut(s) 117, 232
Hsp92II CATG 6 cut(s) 296, 684, 691, 1037, 1046, 1161
HspAI GCGC 2 cut(s) 66, 1141
Kpn2I TCCGGA 1 cut(s) 961
Kzo9I GATC 8 cut(s) 82, 120, 351, 388, 416, 1039, 1150, 1354
LmnI GCTCC 4 cut(s) 226, 500, 1148, 1271
Lsp1109I GCAGC 3 cut(s) 164, 703, 1351
LweI GCATC 3 cut(s) 496, 532, 928
MaeI CTAG 2 cut(s) 194, 276
MaeII ACGT 2 cut(s) 117, 232
MaeIII GTNAC 1 cut(s) 1172
MalI GATC 8 cut(s) 84, 122, 353, 390, 418, 1041, 1152, 1356
MboI GATC 8 cut(s) 82, 120, 351, 388, 416, 1039, 1150, 1354
MflI RGATCY 1 cut(s) 416
MhlI GDGCHC 2 cut(s) 822, 1197
MluCI AATT 6 cut(s) 356, 534, 564, 642, 649, 1163
MlyI GAGTC 4 cut(s) 275, 397, 436, 788
MmeI TCCRAC 3 cut(s) 283, 580, 1249
Mph1103I ATGCAT 1 cut(s) 943
MroI TCCGGA 1 cut(s) 961
MroXI GAANNNNTTC 2 cut(s) 107, 360
MseI TTAA 8 cut(s) 180, 381, 567, 645, 660, 753, 930, 1251
MspA1I CMGCKG 1 cut(s) 143
MspCI CTTAAG 1 cut(s) 179
MspI CCGG 2 cut(s) 962, 1340
MspR9I CCNGG 4 cut(s) 186, 285, 396, 1307
Mva1269I GAATGC 2 cut(s) 10, 941
MvaI CCWGG 4 cut(s) 186, 285, 396, 1307
MvnI CGCG 4 cut(s) 66, 68, 1141, 1217
MwoI GCNNNNNNNGC 6 cut(s) 72, 149, 1064, 1073, 1082, 1322
NcoI CCATGG 1 cut(s) 680
NdeII GATC 8 cut(s) 82, 120, 351, 388, 416, 1039, 1150, 1354
NlaIII CATG 6 cut(s) 296, 684, 691, 1037, 1046, 1161
NlaIV GGNNCC 2 cut(s) 835, 881
NmeAIII GCCGAG 2 cut(s) 105, 136
NmuCI GTSAC 1 cut(s) 1172
NsiI ATGCAT 1 cut(s) 943
NspI RCATGY 2 cut(s) 691, 1037
PaeI GCATGC 1 cut(s) 691
PaeR7I CTCGAG 1 cut(s) 620
PcsI WCGNNNNNNNCGW 1 cut(s) 65
PctI GAATGC 2 cut(s) 10, 941
PdmI GAANNNNTTC 2 cut(s) 107, 360
PfeI GAWTC 3 cut(s) 56, 361, 425
PkrI GCNGC 5 cut(s) 131, 154, 718, 1289, 1366
PleI GAGTC 4 cut(s) 274, 397, 436, 788
PpsI GAGTC 4 cut(s) 274, 397, 436, 788
Ppu21I YACGTR 1 cut(s) 118
PshAI GACNNNNGTC 2 cut(s) 407, 446
PsiI TTATAA 1 cut(s) 473
Psp6I CCWGG 4 cut(s) 184, 283, 394, 1305
PspFI CCCAGC 1 cut(s) 29
PspGI CCWGG 4 cut(s) 184, 283, 394, 1305
PspN4I GGNNCC 2 cut(s) 835, 881
PspPI GGNCC 3 cut(s) 175, 879, 1330
PsrI GAACNNNNNNTAC 2 cut(s) 98, 130
PsuI RGATCY 1 cut(s) 416
PvuII CAGCTG 1 cut(s) 143
RsaI GTAC 5 cut(s) 116, 338, 437, 611, 1010
RsaNI GTAC 5 cut(s) 115, 337, 436, 610, 1009
SaqAI TTAA 8 cut(s) 180, 381, 567, 645, 660, 753, 930, 1251
SatI GCNGC 5 cut(s) 130, 153, 717, 1288, 1365
Sau3AI GATC 8 cut(s) 82, 120, 351, 388, 416, 1039, 1150, 1354
Sau96I GGNCC 3 cut(s) 175, 879, 1330
SchI GAGTC 4 cut(s) 275, 397, 436, 788
ScrFI CCNGG 4 cut(s) 186, 285, 396, 1307
SduI GDGCHC 2 cut(s) 822, 1197
SfaNI GCATC 3 cut(s) 496, 532, 928
Sfr274I CTCGAG 1 cut(s) 620
SlaI CTCGAG 1 cut(s) 620
SmlI CTYRAG 2 cut(s) 179, 620
SmoI CTYRAG 2 cut(s) 179, 620
SphI GCATGC 1 cut(s) 691
Sse9I AATT 6 cut(s) 356, 534, 564, 642, 649, 1163
SsiI CCGC 7 cut(s) 129, 132, 197, 215, 1215, 1287, 1367
SspMI CTAG 2 cut(s) 194, 276
StyD4I CCNGG 4 cut(s) 184, 283, 394, 1305
StyI CCWWGG 3 cut(s) 207, 680, 1317
TaaI ACNGT 5 cut(s) 772, 838, 1105, 1172, 1192
TaiI ACGT 2 cut(s) 120, 235
TaqI TCGA 8 cut(s) 59, 81, 354, 621, 694, 909, 1038, 1149
TasI AATT 6 cut(s) 356, 534, 564, 642, 649, 1163
TatI WGTACW 1 cut(s) 1008
TauI GCSGC 2 cut(s) 132, 1290
TfiI GAWTC 3 cut(s) 56, 361, 425
Tru1I TTAA 8 cut(s) 180, 381, 567, 645, 660, 753, 930, 1251
Tru9I TTAA 8 cut(s) 180, 381, 567, 645, 660, 753, 930, 1251
TscAI CASTG 3 cut(s) 376, 418, 463
TseFI GTSAC 1 cut(s) 1172
TseI GCWGC 3 cut(s) 152, 716, 1364
Tsp45I GTSAC 1 cut(s) 1172
TspDTI ATGAA 3 cut(s) 243, 281, 1146
TspGWI ACGGA 1 cut(s) 950
TspRI CASTG 3 cut(s) 376, 418, 463
Vha464I CTTAAG 1 cut(s) 179
VneI GTGCAC 1 cut(s) 818
XceI RCATGY 2 cut(s) 691, 1037
XhoI CTCGAG 1 cut(s) 620
XmnI GAANNNNTTC 2 cut(s) 107, 360
XspI CTAG 2 cut(s) 194, 276
Zsp2I ATGCAT 1 cut(s) 943
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.