JmjC domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G63080 |
| fragaria_vesca | FvH4_5g05750 FvH4_5g05750 FvH4_5g05750 FvH4_5g05750 FvH4_5g05750 FvH4_5g05750 FvH4_5g05750 FvH4_5g05750 |
| malus_domestica | MD14G1175900.v1.1 |
| prunus_persica | Prupe.5G169900_v2.0.a1 |
| pyrus_communis | pycom14g08050 pycom14g14700 |
| rosa_chinensis | RchiOBHm_Chr7g0193061 |
| rosa_laevigata | RLG00000004298 |
| rosa_multiflora | Rmu_ssc0000002.1_g000011 |
| rosa_roxburghii | Rroxscaffold_3G00262410 |
| rosa_rugosa | Rorug07G0007400 |
| rosa_samantha | Rh7AG132500 Rh7BG133400 Rh7CG136500 Rh7DG134400 |
| rosa_wichuraiana | Rw7G011320 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 295 |
| AcsI | RAATTY | 3 cut(s) | 110, 278, 300 |
| AfaI | GTAC | 2 cut(s) | 103, 324 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 181 |
| AgsI | TTSAA | 5 cut(s) | 57, 201, 238, 278, 283 |
| AluBI | AGCT | 2 cut(s) | 212, 273 |
| AluI | AGCT | 2 cut(s) | 212, 273 |
| Alw21I | GWGCWC | 1 cut(s) | 358 |
| Ama87I | CYCGRG | 1 cut(s) | 167 |
| ApoI | RAATTY | 3 cut(s) | 110, 278, 300 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 233, 265 |
| AspS9I | GGNCC | 1 cut(s) | 172 |
| AsuHPI | GGTGA | 1 cut(s) | 23 |
| AvaI | CYCGRG | 1 cut(s) | 167 |
| AvaII | GGWCC | 1 cut(s) | 172 |
| Bbv12I | GWGCWC | 1 cut(s) | 358 |
| BfaI | CTAG | 2 cut(s) | 105, 263 |
| BfmI | CTRYAG | 1 cut(s) | 19 |
| Bme18I | GGWCC | 1 cut(s) | 172 |
| BmeT110I | CYCGRG | 1 cut(s) | 167 |
| BmgT120I | GGNCC | 1 cut(s) | 172 |
| BmiI | GGNNCC | 3 cut(s) | 16, 173, 174 |
| BsaJI | CCNNGG | 1 cut(s) | 166 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 215, 245 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 181 |
| Bse1I | ACTGG | 1 cut(s) | 248 |
| Bse3DI | GCAATG | 1 cut(s) | 167 |
| BseDI | CCNNGG | 1 cut(s) | 166 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 181 |
| BseMI | GCAATG | 1 cut(s) | 167 |
| BseNI | ACTGG | 1 cut(s) | 248 |
| BseYI | CCCAGC | 1 cut(s) | 43 |
| BsiHKAI | GWGCWC | 1 cut(s) | 358 |
| BsiHKCI | CYCGRG | 1 cut(s) | 167 |
| BslFI | GGGAC | 1 cut(s) | 185 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 181 |
| BsmFI | GGGAC | 1 cut(s) | 185 |
| BsoBI | CYCGRG | 1 cut(s) | 167 |
| Bsp1286I | GDGCHC | 1 cut(s) | 358 |
| BspACI | CCGC | 1 cut(s) | 295 |
| BspHI | TCATGA | 1 cut(s) | 205 |
| BspLI | GGNNCC | 3 cut(s) | 16, 173, 174 |
| BspMAI | CTGCAG | 1 cut(s) | 23 |
| BsrDI | GCAATG | 1 cut(s) | 167 |
| BsrI | ACTGG | 1 cut(s) | 248 |
| BssECI | CCNNGG | 1 cut(s) | 166 |
| Bst4CI | ACNGT | 1 cut(s) | 142 |
| Bst6I | CTCTTC | 1 cut(s) | 119 |
| BstC8I | GCNNGC | 1 cut(s) | 19 |
| BstEII | GGTNACC | 1 cut(s) | 29 |
| BstPI | GGTNACC | 1 cut(s) | 29 |
| BstSFI | CTRYAG | 1 cut(s) | 19 |
| Cac8I | GCNNGC | 1 cut(s) | 19 |
| CciI | TCATGA | 1 cut(s) | 205 |
| Cfr13I | GGNCC | 1 cut(s) | 172 |
| Csp6I | GTAC | 2 cut(s) | 102, 323 |
| CviAII | CATG | 1 cut(s) | 206 |
| CviJI | RGCY | 4 cut(s) | 17, 47, 212, 273 |
| CviKI_1 | RGCY | 4 cut(s) | 17, 47, 212, 273 |
| CviQI | GTAC | 2 cut(s) | 102, 323 |
| Eam1104I | CTCTTC | 1 cut(s) | 119 |
| EarI | CTCTTC | 1 cut(s) | 119 |
| Eco47I | GGWCC | 1 cut(s) | 172 |
| Eco88I | CYCGRG | 1 cut(s) | 167 |
| Eco91I | GGTNACC | 1 cut(s) | 29 |
| EcoO109I | RGGNCCY | 1 cut(s) | 172 |
| EcoO65I | GGTNACC | 1 cut(s) | 29 |
| EcoRI | GAATTC | 2 cut(s) | 110, 278 |
| FaeI | CATG | 1 cut(s) | 209 |
| FaiI | YATR | 4 cut(s) | 189, 195, 207, 341 |
| FaqI | GGGAC | 1 cut(s) | 185 |
| FatI | CATG | 1 cut(s) | 205 |
| FauI | CCCGC | 1 cut(s) | 288 |
| FspBI | CTAG | 2 cut(s) | 105, 263 |
| GsaI | CCCAGC | 1 cut(s) | 47 |
| Hin1II | CATG | 1 cut(s) | 209 |
| HindIII | AAGCTT | 1 cut(s) | 271 |
| HphI | GGTGA | 1 cut(s) | 23 |
| Hpy188I | TCNGA | 3 cut(s) | 78, 94, 123 |
| Hpy188III | TCNNGA | 2 cut(s) | 182, 206 |
| HpyAV | CCTTC | 1 cut(s) | 232 |
| HpyCH4III | ACNGT | 1 cut(s) | 142 |
| HpyCH4V | TGCA | 2 cut(s) | 21, 146 |
| Hsp92II | CATG | 1 cut(s) | 209 |
| KflI | GGGWCCC | 1 cut(s) | 172 |
| LmnI | GCTCC | 2 cut(s) | 14, 184 |
| LpnPI | CCDG | 6 cut(s) | 31, 57, 167, 229, 336, 340 |
| MaeI | CTAG | 2 cut(s) | 105, 263 |
| MaeIII | GTNAC | 1 cut(s) | 29 |
| MboII | GAAGA | 2 cut(s) | 45, 136 |
| MhlI | GDGCHC | 1 cut(s) | 358 |
| MluCI | AATT | 4 cut(s) | 57, 110, 278, 300 |
| MnlI | CCTC | 2 cut(s) | 176, 309 |
| MseI | TTAA | 1 cut(s) | 255 |
| MslI | CAYNNNNRTG | 1 cut(s) | 192 |
| NlaIII | CATG | 1 cut(s) | 209 |
| NlaIV | GGNNCC | 3 cut(s) | 16, 173, 174 |
| NmuCI | GTSAC | 1 cut(s) | 29 |
| PagI | TCATGA | 1 cut(s) | 205 |
| PpuMI | RGGWCCY | 1 cut(s) | 172 |
| Psp5II | RGGWCCY | 1 cut(s) | 172 |
| PspEI | GGTNACC | 1 cut(s) | 29 |
| PspFI | CCCAGC | 1 cut(s) | 43 |
| PspN4I | GGNNCC | 3 cut(s) | 16, 173, 174 |
| PspPI | GGNCC | 1 cut(s) | 172 |
| PspPPI | RGGWCCY | 1 cut(s) | 172 |
| PstI | CTGCAG | 1 cut(s) | 23 |
| RsaI | GTAC | 2 cut(s) | 103, 324 |
| RsaNI | GTAC | 2 cut(s) | 102, 323 |
| RseI | CAYNNNNRTG | 1 cut(s) | 192 |
| SaqAI | TTAA | 1 cut(s) | 255 |
| Sau96I | GGNCC | 1 cut(s) | 172 |
| SduI | GDGCHC | 1 cut(s) | 358 |
| SetI | ASST | 4 cut(s) | 214, 261, 275, 288 |
| SfcI | CTRYAG | 1 cut(s) | 19 |
| SinI | GGWCC | 1 cut(s) | 172 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 192 |
| Sse9I | AATT | 4 cut(s) | 57, 110, 278, 300 |
| SsiI | CCGC | 1 cut(s) | 295 |
| SspMI | CTAG | 2 cut(s) | 105, 263 |
| TaaI | ACNGT | 1 cut(s) | 142 |
| TasI | AATT | 4 cut(s) | 57, 110, 278, 300 |
| Tru1I | TTAA | 1 cut(s) | 255 |
| Tru9I | TTAA | 1 cut(s) | 255 |
| TseFI | GTSAC | 1 cut(s) | 29 |
| Tsp45I | GTSAC | 1 cut(s) | 29 |
| TspDTI | ATGAA | 1 cut(s) | 222 |
| VpaK11BI | GGWCC | 1 cut(s) | 172 |
| XapI | RAATTY | 3 cut(s) | 110, 278, 300 |
| XspI | CTAG | 2 cut(s) | 105, 263 |