pycom14g08120

Microtubule-associated protein 70-2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
OG0003156
Physical Location & Seq
Reverse (-)
8583710 .. 8588892
5183 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1392 bp
ATGGCCAGCACTACTACTCACATTAGCAACGGCGAACACGAACCGCCGACGAAGCCCCCCGCATTCACCTCCTCCGCTTCCTTCAGGGCTCGCAAGAAGACCAATTATTCCGCCGGAATCTCCCGTGCCGCCTCCGATGTCGATGACATCGTCACTCTCATGCACGGCTCCGATCCAGTCCGTGTTGAGCTCAACCGCCTCGAAAATGACCTCCGAGATAAAGACAGGGAGTTGGGAGATGCTGTGGCGGAAATTAAGTCTTTAAGAAATTCAGAGCGCCTTAAAGAAAAGGCGGTTGAAGAGTTGACAGATGAACTTAACAAAGTGGATGAAAAGCTTAAAGCAACTGAAGCTCTTTTGGAAAGCAAGAATCTTGAGATTAAGAAAATAAATGATGAGAAAAAAGCAGCTTTGGCTGCACAATTTGCAGCAGAAGCCACACTTCGAAGAGTTCACGCTGCACAGAAAGATGATGAAATGCCACCCATTGAGGCCATCATTGCTCCACTGGAGGCAGAGCTTAAGCTTGCTAGGCAGGAGGTAACCAAGTTGCAGGATGACAACAGAGCACTTGATCGGCTTACTAAATCCAAAGAGGCTGCTCTGCTTGACACCGAGAGAACTGTTCAGATTGCTTTGGCAAAAGCATCCTTGGTTGACGATCTGCAAAACAAAAACCAAGATCTAATGAAACAGATTGAAATATGCCAGGAGGAGAACAAGATACTTGACAAAATGCACAGACAGAAGGTAGCTGAGGTTGAGAAGCTGACACAAACTGTTCGAGAACTTGAGGAGGCTGTTTTAGCCGGTGGAGCTGCTGCCAATGCTGTGCGTGATTACCAGCGGAAAGTGCAGGAGATGAATGAGGAGAAAAAACTATTGGAGCGGGAGGTGGCTCGTGCAAAGGTCTCTGCAAATCGGGTTGCCACTGTTGTTGCAAATGACTGGAAAGACTCCAGTGACAAAGTCATGCCCGTAAAGCAATGGCTTGAAGAAAGGAAATTTTTTCAGGGAGAAATGCAACAGCTTAGAGACAAACTGGCTGTAGCTGAGCGTACTGCAAAGGCAGAAGCACAATTGAAGGAAAAATACCAATTGAGATTTAAGGTTTTGGAGGATAAGTTAAAAGCATCTAATGGTAAATCGCGTGCGGCTCCAGATGCAAAAATCATAAGCAACAGGCCTTCAAGGCGTCAGTCTCTTGGTGGAGCTGAGAACATTTCTAAATCGTCCTCTAATGGCTATCTATCTAGGACAAAATCAAACTTACAATCTGGTTTCAACCGTGCCAACAGTGCCACTGCAATATTGAAACAAGCCACAGTTTCATCTAGATCGCAGCCGGGAAAGACTGCATGCCTAACAGTGCCAATGATCAGACTCGGATGA

Protein Analysis

464

Amino Acids

51.61

Weight (kDa)

9.17

Isoelectric Point (pI)

43.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MAP70 PF07058 48 - 451 2.8e-222 Microtubule-associated protein 70
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 889
AccII CGCG 1 cut(s) 1150
AclWI GGATC 1 cut(s) 167
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 2 cut(s) 268, 1004
AcuI CTGAAG 2 cut(s) 67, 369
AcyI GRCGYC 1 cut(s) 1195
AfaI GTAC 1 cut(s) 1060
AflII CTTAAG 1 cut(s) 521
AgsI TTSAA 7 cut(s) 299, 701, 995, 1084, 1191, 1285, 1315
AjnI CCWGG 1 cut(s) 708
AjuI GAANNNNNNNTTGG 2 cut(s) 866, 898
Alw21I GWGCWC 2 cut(s) 192, 571
Alw26I GTCTC 3 cut(s) 916, 1029, 1206
AlwI GGATC 1 cut(s) 167
AoxI GGCC 3 cut(s) 3, 492, 1184
ApeKI GCWGC 8 cut(s) 407, 416, 428, 458, 599, 818, 821, 1342
ApoI RAATTY 2 cut(s) 268, 1004
AspLEI GCGC 1 cut(s) 279
AsuC2I CCSGG 1 cut(s) 1347
AsuHPI GGTGA 1 cut(s) 58
AsuII TTCGAA 1 cut(s) 445
BalI TGGCCA 1 cut(s) 5
BanII GRGCYC 2 cut(s) 91, 192
BarI GAAGNNNNNNTAC 2 cut(s) 1076, 1108
BauI CACGAG 1 cut(s) 900
BbsI GAAGAC 1 cut(s) 104
Bbv12I GWGCWC 2 cut(s) 192, 571
BbvCI CCTCAGC 1 cut(s) 756
BbvI GCAGC 8 cut(s) 403, 419, 440, 445, 586, 805, 808, 1354
BccI CCATC 1 cut(s) 503
BceAI ACGGC 2 cut(s) 46, 181
BciT130I CCWGG 1 cut(s) 710
BclI TGATCA 1 cut(s) 1377
BcnI CCSGG 1 cut(s) 1347
BcoDI GTCTC 3 cut(s) 916, 1029, 1206
BfaI CTAG 3 cut(s) 531, 1254, 1335
BfmI CTRYAG 1 cut(s) 1047
BfoI RGCGCY 1 cut(s) 280
BfrI CTTAAG 1 cut(s) 521
BglI GCCNNNNNGGC 1 cut(s) 1192
BglII AGATCT 1 cut(s) 682
BlpI GCTNAGC 1 cut(s) 1053
Bme1390I CCNGG 2 cut(s) 710, 1347
BmiI GGNNCC 2 cut(s) 169, 1158
BmrFI CCNGG 2 cut(s) 710, 1347
BmsI GCATC 4 cut(s) 229, 656, 1142, 1153
BpiI GAAGAC 1 cut(s) 104
BpmI CTGGAG 3 cut(s) 530, 943, 1143
Bpu10I CCTNAGC 1 cut(s) 756
Bpu1102I GCTNAGC 1 cut(s) 1053
Bpu14I TTCGAA 1 cut(s) 445
BpuEI CTTGAG 2 cut(s) 395, 812
BpuMI CCSGG 1 cut(s) 1347
BsaHI GRCGYC 1 cut(s) 1195
BsaI GGTCTC 1 cut(s) 916
BsaJI CCNNGG 1 cut(s) 651
BsaXI ACNNNNNCTCC 4 cut(s) 228, 258, 1109, 1139
Bse118I RCCGGY 1 cut(s) 809
Bse1I ACTGG 5 cut(s) 176, 513, 953, 960, 1047
Bse3DI GCAATG 2 cut(s) 498, 992
BseBI CCWGG 1 cut(s) 710
BseDI CCNNGG 1 cut(s) 651
BseGI GGATG 3 cut(s) 334, 562, 647
BseMI GCAATG 2 cut(s) 498, 992
BseMII CTCAG 3 cut(s) 747, 1044, 1206
BseNI ACTGG 5 cut(s) 176, 513, 953, 960, 1047
BseRI GAGGAG 4 cut(s) 61, 728, 809, 884
BseXI GCAGC 8 cut(s) 403, 419, 440, 445, 586, 805, 808, 1354
BsgI GTGCAG 3 cut(s) 402, 444, 875
Bsh1236I CGCG 1 cut(s) 1150
BshFI GGCC 3 cut(s) 5, 494, 1186
BsiHKAI GWGCWC 2 cut(s) 192, 571
BsiSI CCGG 3 cut(s) 114, 810, 1346
BsmAI GTCTC 3 cut(s) 916, 1029, 1206
BsmI GAATGC 1 cut(s) 62
BsnI GGCC 3 cut(s) 5, 494, 1186
Bso31I GGTCTC 1 cut(s) 916
Bsp119I TTCGAA 1 cut(s) 445
Bsp1286I GDGCHC 3 cut(s) 91, 192, 571
Bsp143I GATC 6 cut(s) 172, 574, 661, 682, 1337, 1377
Bsp1720I GCTNAGC 1 cut(s) 1053
BspANI GGCC 3 cut(s) 5, 494, 1186
BspCNI CTCAG 3 cut(s) 748, 1045, 1207
BspFNI CGCG 1 cut(s) 1150
BspLI GGNNCC 2 cut(s) 169, 1158
BspPI GGATC 1 cut(s) 167
BspT104I TTCGAA 1 cut(s) 445
BspTI CTTAAG 1 cut(s) 521
BspTNI GGTCTC 1 cut(s) 916
BsrBI CCGCTC 1 cut(s) 889
BsrDI GCAATG 2 cut(s) 498, 992
BsrFI RCCGGY 1 cut(s) 809
BsrI ACTGG 5 cut(s) 176, 513, 953, 960, 1047
BssAI RCCGGY 1 cut(s) 809
BssECI CCNNGG 1 cut(s) 651
BssMI GATC 6 cut(s) 172, 574, 661, 682, 1337, 1377
BssNI GRCGYC 1 cut(s) 1195
BssSI CACGAG 1 cut(s) 900
BssT1I CCWWGG 1 cut(s) 651
Bst2BI CACGAG 1 cut(s) 900
Bst2UI CCWGG 1 cut(s) 710
Bst4CI ACNGT 7 cut(s) 625, 781, 934, 1289, 1298, 1327, 1369
Bst6I CTCTTC 2 cut(s) 294, 442
BstACI GRCGYC 1 cut(s) 1195
BstAFI CTTAAG 1 cut(s) 521
BstAPI GCANNNNNTGC 1 cut(s) 425
BstBI TTCGAA 1 cut(s) 445
BstC8I GCNNGC 5 cut(s) 7, 91, 528, 1152, 1360
BstDEI CTNAG 4 cut(s) 756, 1031, 1053, 1215
BstEII GGTNACC 1 cut(s) 541
BstF5I GGATG 3 cut(s) 334, 562, 647
BstFNI CGCG 1 cut(s) 1150
BstH2I RGCGCY 1 cut(s) 280
BstHHI GCGC 1 cut(s) 279
BstKTI GATC 6 cut(s) 175, 577, 664, 685, 1340, 1380
BstMAI GTCTC 3 cut(s) 916, 1029, 1206
BstMBI GATC 6 cut(s) 172, 574, 661, 682, 1337, 1377
BstNI CCWGG 1 cut(s) 710
BstNSI RCATGY 1 cut(s) 1362
BstPI GGTNACC 1 cut(s) 541
BstSCI CCNGG 2 cut(s) 708, 1345
BstSFI CTRYAG 1 cut(s) 1047
BstUI CGCG 1 cut(s) 1150
BstV1I GCAGC 8 cut(s) 403, 419, 440, 445, 586, 805, 808, 1354
BstV2I GAAGAC 1 cut(s) 104
BstX2I RGATCY 1 cut(s) 682
BstYI RGATCY 1 cut(s) 682
BsuRI GGCC 3 cut(s) 5, 494, 1186
BtsCI GGATG 3 cut(s) 334, 562, 647
BtsI GCAGTG 1 cut(s) 1302
BtsIMutI CAGTG 6 cut(s) 506, 930, 967, 1302, 1303, 1374
Cac8I GCNNGC 5 cut(s) 7, 91, 528, 1152, 1360
CfoI GCGC 1 cut(s) 279
Cfr10I RCCGGY 1 cut(s) 809
CseI GACGC 1 cut(s) 1184
Csp6I GTAC 1 cut(s) 1059
CspCI CAANNNNNGTGG 2 cut(s) 919, 954
CviAII CATG 3 cut(s) 160, 973, 1359
CviQI GTAC 1 cut(s) 1059
DdeI CTNAG 4 cut(s) 756, 1031, 1053, 1215
DpnI GATC 6 cut(s) 174, 576, 663, 684, 1339, 1379
DpnII GATC 6 cut(s) 172, 574, 661, 682, 1337, 1377
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 2 cut(s) 294, 442
EarI CTCTTC 2 cut(s) 294, 442
EciI GGCGGA 2 cut(s) 100, 263
Ecl136II GAGCTC 1 cut(s) 190
Eco130I CCWWGG 1 cut(s) 651
Eco147I AGGCCT 1 cut(s) 1186
Eco24I GRGCYC 2 cut(s) 91, 192
Eco31I GGTCTC 1 cut(s) 916
Eco53kI GAGCTC 1 cut(s) 190
Eco57I CTGAAG 2 cut(s) 67, 369
Eco91I GGTNACC 1 cut(s) 541
EcoICRI GAGCTC 1 cut(s) 190
EcoO65I GGTNACC 1 cut(s) 541
EcoRII CCWGG 1 cut(s) 708
EcoT14I CCWWGG 1 cut(s) 651
EcoT38I GRGCYC 2 cut(s) 91, 192
ErhI CCWWGG 1 cut(s) 651
FaeI CATG 3 cut(s) 163, 976, 1362
FaiI YATR 5 cut(s) 161, 706, 974, 1175, 1360
FalI AAGNNNNNCTT 2 cut(s) 426, 458
FatI CATG 3 cut(s) 159, 972, 1358
FauI CCCGC 2 cut(s) 67, 882
FbaI TGATCA 1 cut(s) 1377
FokI GGATG 3 cut(s) 341, 569, 634
FriOI GRGCYC 2 cut(s) 91, 192
FspBI CTAG 3 cut(s) 531, 1254, 1335
GlaI GCGC 1 cut(s) 278
GsuI CTGGAG 3 cut(s) 530, 943, 1143
HaeII RGCGCY 1 cut(s) 280
HaeIII GGCC 3 cut(s) 5, 494, 1186
HapII CCGG 3 cut(s) 114, 810, 1346
HgaI GACGC 1 cut(s) 1184
HhaI GCGC 1 cut(s) 279
Hin1I GRCGYC 1 cut(s) 1195
Hin1II CATG 3 cut(s) 163, 976, 1362
Hin6I GCGC 1 cut(s) 277
HinP1I GCGC 1 cut(s) 277
HincII GTYRAC 2 cut(s) 306, 658
HindII GTYRAC 2 cut(s) 306, 658
HindIII AAGCTT 2 cut(s) 335, 524
HinfI GANTC 4 cut(s) 117, 370, 956, 1383
HpaII CCGG 3 cut(s) 114, 810, 1346
HphI GGTGA 1 cut(s) 58
Hpy166II GTNNAC 3 cut(s) 306, 454, 658
Hpy188I TCNGA 7 cut(s) 136, 172, 215, 274, 630, 1382, 1388
Hpy188III TCNNGA 4 cut(s) 374, 785, 1160, 1335
Hpy8I GTNNAC 3 cut(s) 306, 454, 658
Hpy99I CGWCG 1 cut(s) 52
HpyAV CCTTC 4 cut(s) 91, 742, 1078, 1197
HpyCH4III ACNGT 7 cut(s) 625, 781, 934, 1289, 1298, 1327, 1369
HpyF3I CTNAG 4 cut(s) 756, 1031, 1053, 1215
Hsp92I GRCGYC 1 cut(s) 1195
Hsp92II CATG 3 cut(s) 163, 976, 1362
HspAI GCGC 1 cut(s) 277
Ksp22I TGATCA 1 cut(s) 1377
Kzo9I GATC 6 cut(s) 172, 574, 661, 682, 1337, 1377
LmnI GCTCC 6 cut(s) 173, 508, 815, 886, 1162, 1211
Lsp1109I GCAGC 8 cut(s) 403, 419, 440, 445, 586, 805, 808, 1354
LweI GCATC 4 cut(s) 229, 656, 1142, 1153
MaeI CTAG 3 cut(s) 531, 1254, 1335
MaeIII GTNAC 3 cut(s) 151, 541, 962
MalI GATC 6 cut(s) 174, 576, 663, 684, 1339, 1379
MbiI CCGCTC 1 cut(s) 889
MboI GATC 6 cut(s) 172, 574, 661, 682, 1337, 1377
MboII GAAGA 4 cut(s) 109, 311, 459, 1007
MfeI CAATTG 2 cut(s) 1079, 1097
MflI RGATCY 1 cut(s) 682
MhlI GDGCHC 3 cut(s) 91, 192, 571
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 7 cut(s) 103, 252, 268, 422, 1004, 1079, 1097
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 2 cut(s) 950, 1377
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 9 cut(s) 255, 263, 282, 318, 339, 381, 522, 1107, 1127
MslI CAYNNNNRTG 1 cut(s) 158
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 847
MspCI CTTAAG 1 cut(s) 521
MspI CCGG 3 cut(s) 114, 810, 1346
MspR9I CCNGG 2 cut(s) 710, 1347
MunI CAATTG 2 cut(s) 1079, 1097
Mva1269I GAATGC 1 cut(s) 62
MvaI CCWGG 1 cut(s) 710
MvnI CGCG 1 cut(s) 1150
NciI CCSGG 1 cut(s) 1347
NdeII GATC 6 cut(s) 172, 574, 661, 682, 1337, 1377
NlaIII CATG 3 cut(s) 163, 976, 1362
NlaIV GGNNCC 2 cut(s) 169, 1158
NmuCI GTSAC 2 cut(s) 151, 962
NspI RCATGY 1 cut(s) 1362
NspV TTCGAA 1 cut(s) 445
PaeI GCATGC 1 cut(s) 1362
PceI AGGCCT 1 cut(s) 1186
PcsI WCGNNNNNNNCGW 2 cut(s) 36, 147
PctI GAATGC 1 cut(s) 62
PfeI GAWTC 2 cut(s) 117, 370
PflFI GACNNNGTC 2 cut(s) 149, 968
PleI GAGTC 2 cut(s) 950, 1377
PpsI GAGTC 2 cut(s) 950, 1377
Psp124BI GAGCTC 1 cut(s) 192
Psp6I CCWGG 1 cut(s) 708
PspEI GGTNACC 1 cut(s) 541
PspGI CCWGG 1 cut(s) 708
PspN4I GGNNCC 2 cut(s) 169, 1158
PsuI RGATCY 1 cut(s) 682
PsyI GACNNNGTC 2 cut(s) 149, 968
RsaI GTAC 1 cut(s) 1060
RsaNI GTAC 1 cut(s) 1059
RseI CAYNNNNRTG 1 cut(s) 158
SacI GAGCTC 1 cut(s) 192
SaqAI TTAA 9 cut(s) 255, 263, 282, 318, 339, 381, 522, 1107, 1127
Sau3AI GATC 6 cut(s) 172, 574, 661, 682, 1337, 1377
SchI GAGTC 2 cut(s) 950, 1377
ScrFI CCNGG 2 cut(s) 710, 1347
SduI GDGCHC 3 cut(s) 91, 192, 571
SfaNI GCATC 4 cut(s) 229, 656, 1142, 1153
SfcI CTRYAG 1 cut(s) 1047
SfuI TTCGAA 1 cut(s) 445
SmiMI CAYNNNNRTG 1 cut(s) 158
SmlI CTYRAG 3 cut(s) 374, 521, 791
SmoI CTYRAG 3 cut(s) 374, 521, 791
SphI GCATGC 1 cut(s) 1362
Sse9I AATT 7 cut(s) 103, 252, 268, 422, 1004, 1079, 1097
SseBI AGGCCT 1 cut(s) 1186
SspI AATATT 1 cut(s) 1311
SspMI CTAG 3 cut(s) 531, 1254, 1335
SstI GAGCTC 1 cut(s) 192
StuI AGGCCT 1 cut(s) 1186
StyD4I CCNGG 2 cut(s) 708, 1345
StyI CCWWGG 1 cut(s) 651
TaaI ACNGT 7 cut(s) 625, 781, 934, 1289, 1298, 1327, 1369
TaqI TCGA 4 cut(s) 141, 201, 445, 784
TasI AATT 7 cut(s) 103, 252, 268, 422, 1004, 1079, 1097
TauI GCSGC 2 cut(s) 131, 1157
TfiI GAWTC 2 cut(s) 117, 370
Tru1I TTAA 9 cut(s) 255, 263, 282, 318, 339, 381, 522, 1107, 1127
Tru9I TTAA 9 cut(s) 255, 263, 282, 318, 339, 381, 522, 1107, 1127
TscAI CASTG 6 cut(s) 513, 937, 967, 1303, 1309, 1374
TseFI GTSAC 2 cut(s) 151, 962
TseI GCWGC 8 cut(s) 407, 416, 428, 458, 599, 818, 821, 1342
Tsp45I GTSAC 2 cut(s) 151, 962
TspDTI ATGAA 6 cut(s) 327, 345, 489, 704, 878, 1320
TspGWI ACGGA 1 cut(s) 170
TspRI CASTG 6 cut(s) 513, 937, 967, 1303, 1309, 1374
Tth111I GACNNNGTC 2 cut(s) 149, 968
Vha464I CTTAAG 1 cut(s) 521
XapI RAATTY 2 cut(s) 268, 1004
XbaI TCTAGA 1 cut(s) 1334
XceI RCATGY 1 cut(s) 1362
XspI CTAG 3 cut(s) 531, 1254, 1335
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.