Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0012277

Physical Location & Seq

Genomic Coordinates Reverse (-)

18767559 .. 18770043

Gene Structure 2485 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2328 bp

ATGAATTCTCTCCTCAATCAAAAACTCACCTTCAGAATCTCACTCTCAACTCTCAAGTTTCTATCTTCGGTTACCGTAGCGGAAAACTCATCTTTTTTCCCCATCGAAAACGACCGAATTCCCAGTCGATTTGACCCGGTTCAGTTCTTCAATGATTATGCAAAATCACGACAGTGTACTGCTAAAGTCACTAAAATCTTCCACACCCATTTGATCACAACCGGTTTACTTCAATCCGATATCTCGCTCGCAAATTCATTGCTCGATTTGTATTGTAAGTCTGCTGCCATGGTAGATGCACTCAAGCTGTTTGATTTAATTGCTGACCGAAATGTTTTTTCATGGAATATCATGATTTCCGGTTATAACCACATTTCGTTATTTGAGAAGGCATGGGAAATGTTTTGTAGGATGCATGCTTCGGGTTTTGGGCCCGATGAGTTTGCCTTTGGGAGTGTTCTTTCGGCTTGCATTGCCTTGCAAGCTCCTATTTTTGGGAAGCAGGTCTATTCGCTTGCAATGAAAAATGGGTTCTTTTCGAATGGTTATGTTCAGTCTGGAATGATAGACTTGTTTGCGAAAAATTGCAGCTTTGAAGATGCTTTGAGGGTTTTTCATGATGTTTCATGTCAGAATGTTGTGACTTGGAATGCTATTATCTCTGGGGAGTGTGAGAAATGGAGAAAACAGGGTTGCATTGCATCTTTTTTGGAAAATGTTGTTTTAACCGCTTGTGCTGCACTTGAAGAAATTGAAGTTGGGAAGGAAGTTCAAGGGTTGGTGATTAAACGCGGTGCAAAAGATGTCTTTGTTGGGACTACTATTGTAGATTTATATGCCAAATGTGGAGAAATGAATGAAGCTGTCAAGGAATTCTCACGTATGCCAACTCGTAATGTGGTTTCTTGGACCGCCATCATTTCTGGTTTTGTGCATAAGGACGATTCTATTTCTGCCATCAAATTTTTCAGAGAAATGAGAAAAATCGGAGAGCAAATGAATAAGTACACTGTTACGAGTGTACTTACTGCATGTGCTAAACCATCCATGACTGAAGAGGCAACCCAAATTCACTCATTGATTTTGAAATCTGGATTGTATTCAGCTTCAGTTGTGGGGTCAGCAGAGATGGAAAATATAAAGGATCTCGGCACATGGGCAGCAATAATATCTTCTTTTGCCCAGAATCATAATTCTGGAAGGGCAATTGAATTGTTCCGGCGAATGTTACAGGAAAGCGTGAGACCCGATAAGTTTTGTACTTCCAGCGTCTTGAGCATTGTAGACTGTTTAAATCTAGGGAGACAGATCCACAGCTACATTCTTAAGAGTGGGTTGGTATTTAATGTCTCTGTTGGTAGTTCTCTTTTCACAATGTACTCGAAGTGTGATAGTCTAGAGGAATCTTACAAAGTTTTTCAGCAAATTTCCGACAAAGACAATGTTTCATGGGCCTCGATGATTACCGGTTTTGTCGAACATGGCTTTGCAGATCAAGCCCTTCAGCTATATAGAGAGATACTATTAGAAGAAATTGTACCCGACCAGATGACTTTAACAGCAATTCTAACTGCATGTTCTGCTTTGTGTTCCCTACGGACTGGTATGGAAATTCATTGTCATGCTCTTCGCAGAGGAGTTGAACAAGATGTACTTGGTGGGGCAATTGTGACCATGTACTCAAAATGCGGTGCTCTAGAATTGGCGAGGAGGGTGTTTGATATGCTTCCCCAAAAGGATGATGTTGCGTGCTCCTCCTTGGTTTCAGGGTATGCCCAAAATGGGTATGTCGAAGAGGTGCTTCTGCTATTCCATGATATTTTGATGTCGGGTTTGACTATTGACTCCTACACAATCTCATCCATTCTTGGGGCCATTGCACTTTTGAATGGACTAAGTATCGGGACTCAACTGCATGCTCACATCGCGAAAGTTGGCTTCAATTCACATGTTTCTGTTGGCAGTTCACTAGTGACAATGTACTCAAAATGTGGAAGCATTGAAGATTGCCTCAAAGCATTTGATCAAATTGAGAAGCCAGATTTAGTTTGTTGGACAGCTATGATTGTGAGCTGTGCTCAACACGGGAAAGGCGCAGAGGCTTTAAGAGCATACGAGCTTTTGAGGGAACAAGGAATCAGAAGCTTGTTTCTACTACTTAATTCAATGGTTAAAGACTTTGGACTAAAGCCTGGTGACCGTCACTATGCCTGTCTGGTGGATCTTCTTAGTCGATCGGGCAGACTGAACGAGGCTGCAACATTCATTGAAAATATGCCTATTAAACCCGATGCTTTAATATACGGAGCTTGGAAAGCTAGTTGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

776

Amino Acids

85.66

Weight (kDa)

6.17

Isoelectric Point (pI)

40.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	110 - 157	1.1e-08	PPR repeat family
PPR	PF01535	113 - 143	7.4e-06	PPR repeat
PPR_2	PF13041	298 - 347	4.1e-10	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0012277)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74600
fragaria_vesca	FvH4_5g15030
malus_domestica	MD06G1192600.v1.1 MD14G1199400.v1.1
prunus_persica	Prupe.5G192400_v2.0.a1 Prupe.5G192400_v2.0.a1 Prupe.5G192400_v2.0.a1
pyrus_communis	pycom06g17070 pycom14g16530
rosa_chinensis	RchiOBHm_Chr7g0181221
rosa_laevigata	RLG00000005205
rosa_multiflora	Rmu_sc0001147.1_g000014
rosa_roxburghii	Rroxscaffold_3G00272190
rosa_rugosa	Rorug06G0439600
rosa_samantha	Rh7AG041400 Rh7BG040700 Rh7CG042900 Rh7DG041200
rosa_wichuraiana	Rw7G003410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	366
Acc36I	ACCTGC	1 cut(s)	493
AccI	GTMKAC	1 cut(s)	1284
AccII	CGCG	2 cut(s)	792, 1928
AciI	CCGC	5 cut(s)	80, 729, 792, 912, 1689
AclWI	GGATC	3 cut(s)	1152, 1303, 2229
AcsI	RAATTY	8 cut(s)	4, 117, 253, 872, 962, 1068, 1425, 1611
AcuI	CTGAAG	4 cut(s)	16, 1074, 1092, 1487
AfaI	GTAC	9 cut(s)	178, 1007, 1023, 1261, 1379, 1539, 1653, 1679, 1982
AfiI	CCNNNNNNNGG	3 cut(s)	494, 1782, 1869
AflII	CTTAAG	1 cut(s)	1325
AflIII	ACRYGT	1 cut(s)	1948
AgeI	ACCGGT	2 cut(s)	221, 1466
AhlI	ACTAGT	1 cut(s)	1969
AjnI	CCWGG	1 cut(s)	2191
AjuI	GAANNNNNNNTTGG	2 cut(s)	741, 773
AleI	CACNNNNGTG	1 cut(s)	172
Alw21I	GWGCWC	3 cut(s)	1696, 1754, 2080
Alw26I	GTCTC	3 cut(s)	1237, 1297, 1354
AlwI	GGATC	3 cut(s)	1152, 1303, 2229
AoxI	GGCC	3 cut(s)	431, 1452, 1872
ApaI	GGGCCC	1 cut(s)	435
ApeKI	GCWGC	5 cut(s)	284, 588, 737, 1160, 2255
ApoI	RAATTY	8 cut(s)	4, 117, 253, 872, 962, 1068, 1425, 1611
ArsI	GACNNNNNNTTYG	2 cut(s)	109, 141
AsiGI	ACCGGT	2 cut(s)	221, 1466
AspLEI	GCGC	1 cut(s)	2096
AspS9I	GGNCC	5 cut(s)	431, 432, 909, 1452, 1872
AsuC2I	CCSGG	1 cut(s)	137
AsuHPI	GGTGA	3 cut(s)	19, 793, 2207
AsuII	TTCGAA	1 cut(s)	539
AvaII	GGWCC	1 cut(s)	909
BaeGI	GKGCMC	1 cut(s)	435
BanII	GRGCYC	1 cut(s)	435
BarI	GAAGNNNNNNTAC	2 cut(s)	1521, 1553
Bbv12I	GWGCWC	3 cut(s)	1696, 1754, 2080
BbvI	GCAGC	5 cut(s)	271, 600, 724, 1172, 2242
BccI	CCATC	5 cut(s)	110, 923, 965, 1051, 1123
BcgI	CGANNNNNNTGC	2 cut(s)	425, 459
BciT130I	CCWGG	1 cut(s)	2193
BclI	TGATCA	2 cut(s)	213, 2023
BcnI	CCSGG	1 cut(s)	137
BcoDI	GTCTC	3 cut(s)	1237, 1297, 1354
BcuI	ACTAGT	1 cut(s)	1969
BfaI	CTAG	5 cut(s)	1298, 1397, 1697, 1970, 2319
BfrI	CTTAAG	1 cut(s)	1325
BfuAI	ACCTGC	1 cut(s)	493
BisI	GCNGC	5 cut(s)	285, 589, 738, 1161, 2256
BlsI	GCNGC	5 cut(s)	286, 590, 739, 1162, 2257
Bme1390I	CCNGG	2 cut(s)	137, 2193
Bme18I	GGWCC	1 cut(s)	909
BmgT120I	GGNCC	5 cut(s)	431, 432, 909, 1452, 1872
BmiI	GGNNCC	2 cut(s)	433, 1873
BmrFI	CCNGG	2 cut(s)	137, 2193
BmrI	ACTGGG	1 cut(s)	117
BmsI	GCATC	5 cut(s)	286, 402, 589, 710, 2281
BmuI	ACTGGG	1 cut(s)	117
BplI	GAGNNNNNCTC	2 cut(s)	2062, 2094
Bpu14I	TTCGAA	1 cut(s)	539
BpuEI	CTTGAG	3 cut(s)	38, 287, 1294
BpuMI	CCSGG	1 cut(s)	137
BsaAI	YACGTR	1 cut(s)	881
BsaI	GGTCTC	1 cut(s)	1237
BsaJI	CCNNGG	2 cut(s)	288, 1758
BsaWI	WCCGGW	3 cut(s)	221, 359, 1466
Bsc4I	CCNNNNNNNGG	3 cut(s)	494, 1782, 1869
Bse118I	RCCGGY	2 cut(s)	221, 1466
Bse1I	ACTGG	2 cut(s)	123, 1606
Bse3DI	GCAATG	5 cut(s)	257, 471, 525, 696, 1875
BseBI	CCWGG	1 cut(s)	2193
BseDI	CCNNGG	2 cut(s)	288, 1758
BseGI	GGATG	4 cut(s)	417, 1043, 1744, 1859
BseLI	CCNNNNNNNGG	3 cut(s)	494, 1782, 1869
BseMI	GCAATG	5 cut(s)	257, 471, 525, 696, 1875
BseNI	ACTGG	2 cut(s)	123, 1606
BseRI	GAGGAG	3 cut(s)	1650, 1723, 1744
BseSI	GKGCMC	1 cut(s)	435
BseXI	GCAGC	5 cut(s)	271, 600, 724, 1172, 2242
BsgI	GTGCAG	1 cut(s)	723
Bsh1236I	CGCG	2 cut(s)	792, 1928
Bsh1285I	CGRYCG	2 cut(s)	115, 2237
BshFI	GGCC	3 cut(s)	433, 1454, 1874
BshTI	ACCGGT	2 cut(s)	221, 1466
BsiEI	CGRYCG	2 cut(s)	115, 2237
BsiHKAI	GWGCWC	3 cut(s)	1696, 1754, 2080
BsiSI	CCGG	5 cut(s)	137, 222, 360, 1219, 1467
BslFI	GGGAC	2 cut(s)	829, 1918
BslI	CCNNNNNNNGG	3 cut(s)	494, 1782, 1869
BsmAI	GTCTC	3 cut(s)	1237, 1297, 1354
BsmFI	GGGAC	2 cut(s)	829, 1918
BsmI	GAATGC	1 cut(s)	655
BsnI	GGCC	3 cut(s)	433, 1454, 1874
Bso31I	GGTCTC	1 cut(s)	1237
Bsp119I	TTCGAA	1 cut(s)	539
Bsp120I	GGGCCC	1 cut(s)	431
Bsp1286I	GDGCHC	4 cut(s)	435, 1696, 1754, 2080
Bsp143I	GATC	7 cut(s)	213, 1144, 1308, 1492, 2023, 2221, 2234
Bsp19I	CCATGG	1 cut(s)	288
Bsp68I	TCGCGA	1 cut(s)	1928
BspACI	CCGC	5 cut(s)	80, 729, 792, 912, 1689
BspANI	GGCC	3 cut(s)	433, 1454, 1874
BspFNI	CGCG	2 cut(s)	792, 1928
BspHI	TCATGA	2 cut(s)	351, 616
BspLI	GGNNCC	2 cut(s)	433, 1873
BspMI	ACCTGC	1 cut(s)	493
BspPI	GGATC	3 cut(s)	1152, 1303, 2229
BspQI	GCTCTTC	1 cut(s)	1632
BspT104I	TTCGAA	1 cut(s)	539
BspTI	CTTAAG	1 cut(s)	1325
BspTNI	GGTCTC	1 cut(s)	1237
BsrDI	GCAATG	5 cut(s)	257, 471, 525, 696, 1875
BsrFI	RCCGGY	2 cut(s)	221, 1466
BsrI	ACTGG	2 cut(s)	123, 1606
BssAI	RCCGGY	2 cut(s)	221, 1466
BssECI	CCNNGG	2 cut(s)	288, 1758
BssMI	GATC	7 cut(s)	213, 1144, 1308, 1492, 2023, 2221, 2234
BssT1I	CCWWGG	2 cut(s)	288, 1758
Bst2UI	CCWGG	1 cut(s)	2193
Bst4CI	ACNGT	5 cut(s)	76, 174, 1012, 1289, 2201
Bst6I	CTCTTC	3 cut(s)	1050, 1632, 1788
BstAFI	CTTAAG	1 cut(s)	1325
BstAPI	GCANNNNNTGC	1 cut(s)	1580
BstBAI	YACGTR	1 cut(s)	881
BstBI	TTCGAA	1 cut(s)	539
BstC8I	GCNNGC	7 cut(s)	249, 417, 469, 483, 516, 1750, 1917
BstDEI	CTNAG	2 cut(s)	1895, 2228
BstDSI	CCRYGG	1 cut(s)	288
BstEII	GGTNACC	2 cut(s)	70, 2195
BstF5I	GGATG	4 cut(s)	417, 1043, 1744, 1859
BstFNI	CGCG	2 cut(s)	792, 1928
BstHHI	GCGC	1 cut(s)	2096
BstKTI	GATC	7 cut(s)	216, 1147, 1311, 1495, 2026, 2224, 2237
BstMAI	GTCTC	3 cut(s)	1237, 1297, 1354
BstMBI	GATC	7 cut(s)	213, 1144, 1308, 1492, 2023, 2221, 2234
BstMCI	CGRYCG	2 cut(s)	115, 2237
BstMWI	GCNNNNNNNGC	9 cut(s)	473, 482, 737, 1275, 1496, 1580, 1925, 2108, 2315
BstNI	CCWGG	1 cut(s)	2193
BstNSI	RCATGY	5 cut(s)	419, 1035, 1578, 1919, 1952
BstPI	GGTNACC	2 cut(s)	70, 2195
BstSCI	CCNGG	2 cut(s)	135, 2191
BstSLI	GKGCMC	1 cut(s)	435
BstUI	CGCG	2 cut(s)	792, 1928
BstV1I	GCAGC	5 cut(s)	271, 600, 724, 1172, 2242
BstX2I	RGATCY	3 cut(s)	1144, 1308, 2221
BstYI	RGATCY	3 cut(s)	1144, 1308, 2221
BsuRI	GGCC	3 cut(s)	433, 1454, 1874
BtgI	CCRYGG	1 cut(s)	288
BtgZI	GCGATG	1 cut(s)	1909
BtsCI	GGATG	4 cut(s)	417, 1043, 1744, 1859
BtsIMutI	CAGTG	2 cut(s)	179, 1008
BtuMI	TCGCGA	1 cut(s)	1928
BveI	ACCTGC	1 cut(s)	493
Cac8I	GCNNGC	7 cut(s)	249, 417, 469, 483, 516, 1750, 1917
CciI	TCATGA	2 cut(s)	351, 616
CfoI	GCGC	1 cut(s)	2096
Cfr10I	RCCGGY	2 cut(s)	221, 1466
Cfr13I	GGNCC	5 cut(s)	431, 432, 909, 1452, 1872
CseI	GACGC	1 cut(s)	1258
Csp6I	GTAC	9 cut(s)	177, 1006, 1022, 1260, 1378, 1538, 1652, 1678, 1981
CspAI	ACCGGT	2 cut(s)	221, 1466
CviQI	GTAC	9 cut(s)	177, 1006, 1022, 1260, 1378, 1538, 1652, 1678, 1981
DdeI	CTNAG	2 cut(s)	1895, 2228
DpnI	GATC	7 cut(s)	215, 1146, 1310, 1494, 2025, 2223, 2236
DpnII	GATC	7 cut(s)	213, 1144, 1308, 1492, 2023, 2221, 2234
DraI	TTTAAA	1 cut(s)	1293
Eam1104I	CTCTTC	3 cut(s)	1050, 1632, 1788
EarI	CTCTTC	3 cut(s)	1050, 1632, 1788
Eco130I	CCWWGG	2 cut(s)	288, 1758
Eco24I	GRGCYC	1 cut(s)	435
Eco31I	GGTCTC	1 cut(s)	1237
Eco32I	GATATC	1 cut(s)	241
Eco47I	GGWCC	1 cut(s)	909
Eco57I	CTGAAG	4 cut(s)	16, 1074, 1092, 1487
Eco91I	GGTNACC	2 cut(s)	70, 2195
EcoO65I	GGTNACC	2 cut(s)	70, 2195
EcoRI	GAATTC	3 cut(s)	4, 117, 872
EcoRII	CCWGG	1 cut(s)	2191
EcoRV	GATATC	1 cut(s)	241
EcoT14I	CCWWGG	2 cut(s)	288, 1758
EcoT22I	ATGCAT	1 cut(s)	417
EcoT38I	GRGCYC	1 cut(s)	435
ErhI	CCWWGG	2 cut(s)	288, 1758
FalI	AAGNNNNNCTT	4 cut(s)	1638, 1670, 1785, 1817
FaqI	GGGAC	2 cut(s)	829, 1918
FbaI	TGATCA	2 cut(s)	213, 2023
FblI	GTMKAC	1 cut(s)	1284
Fnu4HI	GCNGC	5 cut(s)	285, 589, 738, 1161, 2256
FokI	GGATG	4 cut(s)	424, 1030, 1751, 1846
FriOI	GRGCYC	1 cut(s)	435
Fsp4HI	GCNGC	5 cut(s)	285, 589, 738, 1161, 2256
FspBI	CTAG	5 cut(s)	1298, 1397, 1697, 1970, 2319
GlaI	GCGC	1 cut(s)	2095
GluI	GCNGC	5 cut(s)	285, 589, 738, 1161, 2256
HaeIII	GGCC	3 cut(s)	433, 1454, 1874
HapII	CCGG	5 cut(s)	137, 222, 360, 1219, 1467
HgaI	GACGC	1 cut(s)	1258
HhaI	GCGC	1 cut(s)	2096
Hin6I	GCGC	1 cut(s)	2094
HinP1I	GCGC	1 cut(s)	2094
HindIII	AAGCTT	1 cut(s)	2143
HinfI	GANTC	7 cut(s)	36, 944, 1186, 1403, 1844, 1906, 2136
HpaII	CCGG	5 cut(s)	137, 222, 360, 1219, 1467
HphI	GGTGA	3 cut(s)	19, 793, 2207
Hpy166II	GTNNAC	6 cut(s)	177, 227, 1008, 1022, 1285, 1967
Hpy188I	TCNGA	7 cut(s)	35, 238, 633, 971, 989, 1432, 2141
Hpy8I	GTNNAC	6 cut(s)	177, 227, 1008, 1022, 1285, 1967
HpyAV	CCTTC	5 cut(s)	40, 382, 757, 1194, 1511
HpyCH4III	ACNGT	5 cut(s)	76, 174, 1012, 1289, 2201
HpyCH4IV	ACGT	1 cut(s)	880
HpyF10VI	GCNNNNNNNGC	9 cut(s)	473, 482, 737, 1275, 1496, 1580, 1925, 2108, 2315
HpyF3I	CTNAG	2 cut(s)	1895, 2228
HpySE526I	ACGT	1 cut(s)	880
HspAI	GCGC	1 cut(s)	2094
Ksp22I	TGATCA	2 cut(s)	213, 2023
Kzo9I	GATC	7 cut(s)	213, 1144, 1308, 1492, 2023, 2221, 2234
LguI	GCTCTTC	1 cut(s)	1632
LmnI	GCTCC	3 cut(s)	490, 1757, 2306
Lsp1109I	GCAGC	5 cut(s)	271, 600, 724, 1172, 2242
LweI	GCATC	5 cut(s)	286, 402, 589, 710, 2281
MaeI	CTAG	5 cut(s)	1298, 1397, 1697, 1970, 2319
MaeII	ACGT	1 cut(s)	880
MaeIII	GTNAC	9 cut(s)	70, 187, 640, 1012, 1227, 1669, 1972, 2195, 2201
MalI	GATC	7 cut(s)	215, 1146, 1310, 1494, 2025, 2223, 2236
MboI	GATC	7 cut(s)	213, 1144, 1308, 1492, 2023, 2221, 2234
MfeI	CAATTG	2 cut(s)	1206, 1665
MflI	RGATCY	3 cut(s)	1144, 1308, 2221
MhlI	GDGCHC	4 cut(s)	435, 1696, 1754, 2080
MlyI	GAGTC	2 cut(s)	1838, 1900
MmeI	TCCRAC	2 cut(s)	1455, 2033
Mph1103I	ATGCAT	1 cut(s)	417
MslI	CAYNNNNRTG	2 cut(s)	172, 1620
MspCI	CTTAAG	1 cut(s)	1325
MspI	CCGG	5 cut(s)	137, 222, 360, 1219, 1467
MspR9I	CCNGG	2 cut(s)	137, 2193
MunI	CAATTG	2 cut(s)	1206, 1665
Mva1269I	GAATGC	1 cut(s)	655
MvaI	CCWGG	1 cut(s)	2193
MvnI	CGCG	2 cut(s)	792, 1928
MwoI	GCNNNNNNNGC	9 cut(s)	473, 482, 737, 1275, 1496, 1580, 1925, 2108, 2315
NciI	CCSGG	1 cut(s)	137
NcoI	CCATGG	1 cut(s)	288
NdeII	GATC	7 cut(s)	213, 1144, 1308, 1492, 2023, 2221, 2234
NlaIV	GGNNCC	2 cut(s)	433, 1873
NmeAIII	GCCGAG	1 cut(s)	1128
NmuCI	GTSAC	6 cut(s)	187, 640, 1669, 1972, 2195, 2201
NruI	TCGCGA	1 cut(s)	1928
NsiI	ATGCAT	1 cut(s)	417
NspI	RCATGY	5 cut(s)	419, 1035, 1578, 1919, 1952
NspV	TTCGAA	1 cut(s)	539
OliI	CACNNNNGTG	1 cut(s)	172
PaeI	GCATGC	2 cut(s)	419, 1919
PagI	TCATGA	2 cut(s)	351, 616
PciI	ACATGT	1 cut(s)	1948
PciSI	GCTCTTC	1 cut(s)	1632
PctI	GAATGC	1 cut(s)	655
PfeI	GAWTC	5 cut(s)	36, 944, 1186, 1403, 2136
PinAI	ACCGGT	2 cut(s)	221, 1466
PkrI	GCNGC	5 cut(s)	286, 590, 739, 1162, 2257
Ple19I	CGATCG	1 cut(s)	2237
PleI	GAGTC	2 cut(s)	1838, 1900
PpsI	GAGTC	2 cut(s)	1838, 1900
Ppu21I	YACGTR	1 cut(s)	881
PscI	ACATGT	1 cut(s)	1948
PsiI	TTATAA	1 cut(s)	366
Psp6I	CCWGG	1 cut(s)	2191
PspEI	GGTNACC	2 cut(s)	70, 2195
PspGI	CCWGG	1 cut(s)	2191
PspN4I	GGNNCC	2 cut(s)	433, 1873
PspOMI	GGGCCC	1 cut(s)	431
PspPI	GGNCC	5 cut(s)	431, 432, 909, 1452, 1872
PsrI	GAACNNNNNNTAC	2 cut(s)	1635, 1667
PsuI	RGATCY	3 cut(s)	1144, 1308, 2221
PvuI	CGATCG	1 cut(s)	2237
RruI	TCGCGA	1 cut(s)	1928
RsaI	GTAC	9 cut(s)	178, 1007, 1023, 1261, 1379, 1539, 1653, 1679, 1982
RsaNI	GTAC	9 cut(s)	177, 1006, 1022, 1260, 1378, 1538, 1652, 1678, 1981
RseI	CAYNNNNRTG	2 cut(s)	172, 1620
SapI	GCTCTTC	1 cut(s)	1632
SatI	GCNGC	5 cut(s)	285, 589, 738, 1161, 2256
Sau3AI	GATC	7 cut(s)	213, 1144, 1308, 1492, 2023, 2221, 2234
Sau96I	GGNCC	5 cut(s)	431, 432, 909, 1452, 1872
SchI	GAGTC	2 cut(s)	1838, 1900
ScrFI	CCNGG	2 cut(s)	137, 2193
SduI	GDGCHC	4 cut(s)	435, 1696, 1754, 2080
SfaNI	GCATC	5 cut(s)	286, 402, 589, 710, 2281
SfuI	TTCGAA	1 cut(s)	539
SinI	GGWCC	1 cut(s)	909
SmiMI	CAYNNNNRTG	2 cut(s)	172, 1620
SmlI	CTYRAG	4 cut(s)	53, 302, 1273, 1325
SmoI	CTYRAG	4 cut(s)	53, 302, 1273, 1325
SpeI	ACTAGT	1 cut(s)	1969
SphI	GCATGC	2 cut(s)	419, 1919
SsiI	CCGC	5 cut(s)	80, 729, 792, 912, 1689
SspMI	CTAG	5 cut(s)	1298, 1397, 1697, 1970, 2319
StyD4I	CCNGG	2 cut(s)	135, 2191
StyI	CCWWGG	2 cut(s)	288, 1758
TaaI	ACNGT	5 cut(s)	76, 174, 1012, 1289, 2201
TaiI	ACGT	1 cut(s)	883
TaqI	TCGA	9 cut(s)	105, 127, 264, 539, 1382, 1457, 1476, 1791, 2233
TaqII	GACCGA	2 cut(s)	129, 342
TatI	WGTACW	8 cut(s)	176, 1005, 1021, 1259, 1377, 1651, 1677, 1980
TfiI	GAWTC	5 cut(s)	36, 944, 1186, 1403, 2136
TscAI	CASTG	2 cut(s)	179, 1015
TseFI	GTSAC	6 cut(s)	187, 640, 1669, 1972, 2195, 2201
TseI	GCWGC	5 cut(s)	284, 588, 737, 1160, 2255
Tsp45I	GTSAC	6 cut(s)	187, 640, 1669, 1972, 2195, 2201
TspGWI	ACGGA	2 cut(s)	1612, 2319
TspRI	CASTG	2 cut(s)	179, 1015
Vha464I	CTTAAG	1 cut(s)	1325
VpaK11BI	GGWCC	1 cut(s)	909
XapI	RAATTY	8 cut(s)	4, 117, 253, 872, 962, 1068, 1425, 1611
XbaI	TCTAGA	2 cut(s)	1396, 1696
XceI	RCATGY	5 cut(s)	419, 1035, 1578, 1919, 1952
XmiI	GTMKAC	1 cut(s)	1284
XspI	CTAG	5 cut(s)	1298, 1397, 1697, 1970, 2319
Zsp2I	ATGCAT	1 cut(s)	417

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.