Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0005853

Physical Location & Seq

Genomic Coordinates Reverse (-)

20651596 .. 20654982

Gene Structure 3387 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1956 bp

ATGCTGTCTGAGATGTCTGAAGTGACAGAGTTGCATCCTGTTCCTGATGCTCACGTTCCAGTAATGAAATTCAAGTTCAGTGGGGTTTCAATAGATCTTCTGTATGCACAACTAGCACTTTGGGTTGTTCCTGAAGACTTGGATATATCACAAGACTCAATACTACAGAATGCAGATGAACAGACAGTTCGTAGTCTCAATGGCTGTAGAGTTACAGACCAAATTCTGCGTTTGGTCCCTAACATTCAGAGTTTCCGTACAACGTTAAGATGCATGAGGTTATGGGCAAAGCGTCGTGGTGTTTATTCAAATGTTACAGGGTTTCTCGGTGGTATAAACTGGGCATTGCTTGTTGCTCGCATATGCCAACTTTACCCGAATGCACTGCCTAATATGCTAGTTTCTCGGTTCTTCAGGGTATATACTCAGTGGCGTTGGCCAAATCCAGTCATGCTTTGTGCTATTGAAGATGGGTCTCTTGGACTTCAGGTTTGGGATCCTAGAAGATATATAAAGGACACATATCATTTGATGCCTATAATTACTCCGGCTTATCCCAGTATGAACTCTAGCTACAATGTGTCCGCAAGTACTTTGCGTATCATGTTAGAGGAGTTTCAGAGGGGTAATGAAATTTGTGAGGCTATGGAAGCAAATAAGGCTGATTGGGATACCCTTTTTGAGTCTTATGCTTTCTTTGAAGCATATAAGAATTATTTACAGATAGACATCAGTGCAGAAAATGCTGATGACTTTAGAAAATGGAAGGGCTGGGTTGAGTCTCGTCTCCGTAAACTAACCCTGAAGATTGAGTGGCACAGGCTGCAGTGTCACCCACATCCAGGTGATTTTTCAGACAGATCGAGACCATTTCATAGTTCGTTCTTTATGGGCCTACAACGAAAACAAGGAGTTCCAGTCGCTGAAGGCGAGCAGTTTGACATAAGGGGAACTGTTGAGGAATTTAAGAATGCTGTCAACCTTTACATGTTACGGAAGCCTGGAATGGAGATCCGTGTATCCCATGTAAAACGCAGGAACATTCCCGATTTTGTGTTTCCTGGTGGTGTTCGACCATTGCGCCCATCTAAAGTTACTTGGGACAGCAGGCGTAGTTCAGAAGTGAAGGCTTCTAGTGATGCTCAAGCAGAGAAATCGTCCGAAGGAAATGGATCAGATGGTGGACAGAAGAGAAAGCGGGCGGATGATAATGTAGAGTCTGACTCAAGGGATGCCAAGTCTTTATGTCTCTGTAGCGGGGAAGGTAAAACTGATTTAGATGGATCAGACAGTGGACAGAAGAGAAAGCGGGTGGATGATAATGTAGAAACTGACTCAAGGCATGCCAAGTCTTTACATCTCTGCAGTGATGAAGTTCGTGAGGCTAGCCCTCCTATCAGCAATGTCAGTTCATTTTCCACAATATGTGATGGTATCGATGCAAACAAAAATCACAATAATAACGTGAAAATTAGCTTAGGGAAGATAGAAAACCCGGTAGACATTCCTTATCAGAATGGTCAGACTGAAGTATCGTCAAGGTGCAATCCACCAGTCGATAGTCTGTTTTCTGTTGTGAATACATCAAGTTCTAAGGAAGAGGTACTGGAGAAGATTATGGGCGGTCCATGTGTTTCCCACCAAGCTTTGCCAGAAGTGGATGAGCTTGAAGATGATTTGGAATATAGACATCAAGTCAAAGACTCTTCAGGAAATATGAAAGGCAGTCAAATGGAGGCTTCAGAGGAGAGTGCGTCAGTTGCAACGCTAGTAAATTATAGCAACGGAGCTGGTACTTCCACCGATTTATATAATGGGGGATCAGAGGAACTTGAGCCTGCTGAACTTATGGCGCCATTCTCAAACGGAACCCCTTCTCCGCCTGTGGCTCAGAGAAAGCCGATCATCAGGTTGAATTTCACTTCATTGGCCAAAGCTGCTGGTAAAAGCTCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002682 GO:0002683 GO:0003006 GO:0003674 GO:0003824 GO:0004652 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005847 GO:0005849 GO:0006139 GO:0006378 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008285 GO:0009653 GO:0009791 GO:0009908 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016740 GO:0016772 GO:0016779 GO:0022414 GO:0031123 GO:0031124 GO:0031347 GO:0031348 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034641 GO:0042127 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045088 GO:0045824 GO:0046483 GO:0048366 GO:0048367 GO:0048437 GO:0048438 GO:0048441 GO:0048444 GO:0048446 GO:0048449 GO:0048451 GO:0048465 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0050776 GO:0050777 GO:0050789 GO:0050794 GO:0061458 GO:0065007 GO:0070013 GO:0070566 GO:0071704 GO:0080134 GO:0090304 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:1901360 GO:1905392 GO:1905393

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

NTP_transf_2 PAP_RNA-bind PAP_central

Protein Analysis

652

Amino Acids

72.94

Weight (kDa)

5.83

Isoelectric Point (pI)

52.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PAP_NTPase	PF20750	1 - 79	9.9e-34	Poly(A) polymerase nucleotidyltransferase domain
PAP_central	PF04928	84 - 228	5.9e-69	Poly(A) polymerase central domain
PAP_RNA-bind	PF04926	232 - 274	1.5e-11	Poly(A) polymerase predicted RNA binding domain
PAP_RNA-bind	PF04926	288 - 358	2.8e-06	Poly(A) polymerase predicted RNA binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005853)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17980 AT1G17980
fragaria_vesca	FvH4_5g16820 FvH4_5g16820 FvH4_5g16820 FvH4_5g16820
malus_domestica	MD06G1222200.v1.1 MD09G1233900.v1.1 MD14G1231300.v1.1 MD17G1263100.v1.1
prunus_persica	Prupe.5G226600_v2.0.a1 Prupe.5G226600_v2.0.a1 Prupe.5G226600_v2.0.a1
pyrus_communis	pycom06g19770 pycom14g19250 pycom17g26340
rosa_chinensis	RchiOBHm_Chr7g0179251
rosa_laevigata	RLG00000005369
rosa_multiflora	Rmu_sc0006939.1_g000005
rosa_roxburghii	Rroxscaffold_3G00274180
rosa_rugosa	Rorug06G0422700 Rorug06G0422800 Rorug06G0422800
rosa_samantha	Rh7AG022000 Rh7BG021900 Rh7CG023200 Rh7DG022500
rosa_wichuraiana	Rw7G001810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1852
AccI	GTMKAC	1 cut(s)	1500
AciI	CCGC	7 cut(s)	585, 1198, 1202, 1257, 1309, 1623, 1880
AclI	AACGTT	1 cut(s)	263
AclWI	GGATC	6 cut(s)	491, 504, 1006, 1180, 1291, 1828
AcoI	YGGCCR	2 cut(s)	437, 1929
AcsI	RAATTY	5 cut(s)	68, 222, 633, 962, 1915
AcuI	CTGAAG	9 cut(s)	39, 153, 397, 470, 824, 945, 1548, 1692, 1725
AcyI	GRCGYC	1 cut(s)	1853
AfaI	GTAC	4 cut(s)	259, 592, 1605, 1795
AfiI	CCNNNNNNNGG	1 cut(s)	842
AflIII	ACRYGT	1 cut(s)	987
AgsI	TTSAA	7 cut(s)	73, 90, 309, 467, 701, 1670, 1915
AhdI	GACNNNNNGTC	1 cut(s)	1694
AjnI	CCWGG	3 cut(s)	841, 1000, 1060
AloI	GAACNNNNNNTCC	2 cut(s)	1861, 1893
AluBI	AGCT	7 cut(s)	573, 1476, 1646, 1666, 1790, 1937, 1950
AluI	AGCT	7 cut(s)	573, 1476, 1646, 1666, 1790, 1937, 1950
Alw26I	GTCTC	6 cut(s)	200, 480, 786, 791, 859, 1253
AlwI	GGATC	6 cut(s)	491, 504, 1006, 1180, 1291, 1828
AlwNI	CAGNNNCTG	1 cut(s)	923
AoxI	GGCC	3 cut(s)	437, 892, 1929
ApeKI	GCWGC	2 cut(s)	823, 1937
ApoI	RAATTY	5 cut(s)	68, 222, 633, 962, 1915
ArsI	GACNNNNNNTTYG	2 cut(s)	474, 506
Asp700I	GAANNNNTTC	1 cut(s)	1873
AspLEI	GCGC	2 cut(s)	1083, 1855
AspS9I	GGNCC	3 cut(s)	235, 892, 1625
AsuC2I	CCSGG	1 cut(s)	1496
AsuHPI	GGTGA	2 cut(s)	824, 857
AsuNHI	GCTAGC	1 cut(s)	1385
AvaII	GGWCC	2 cut(s)	235, 1625
BaeI	ACNNNNGTAYC	2 cut(s)	1515, 1548
BalI	TGGCCA	2 cut(s)	439, 1931
BamHI	GGATCC	1 cut(s)	496
BanI	GGYRCC	1 cut(s)	1852
BbsI	GAAGAC	1 cut(s)	141
BbvI	GCAGC	2 cut(s)	810, 1924
BccI	CCATC	5 cut(s)	464, 1093, 1172, 1274, 1424
BcgI	CGANNNNNNTGC	4 cut(s)	367, 401, 1137, 1171
BciT130I	CCWGG	3 cut(s)	843, 1002, 1062
BciVI	GTATCC	2 cut(s)	664, 1030
BcnI	CCSGG	1 cut(s)	1496
BcoDI	GTCTC	6 cut(s)	200, 480, 786, 791, 859, 1253
BfaI	CTAG	7 cut(s)	113, 398, 501, 570, 1134, 1386, 1769
BfmI	CTRYAG	5 cut(s)	164, 205, 824, 1252, 1363
BfoI	RGCGCY	1 cut(s)	1856
BfuI	GTATCC	2 cut(s)	664, 1030
BglII	AGATCT	1 cut(s)	94
BisI	GCNGC	2 cut(s)	824, 1938
BlsI	GCNGC	2 cut(s)	825, 1939
BmcAI	AGTACT	1 cut(s)	592
Bme1390I	CCNGG	4 cut(s)	843, 1002, 1062, 1496
Bme18I	GGWCC	2 cut(s)	235, 1625
BmeRI	GACNNNNNGTC	1 cut(s)	1694
BmgT120I	GGNCC	3 cut(s)	235, 892, 1625
BmiI	GGNNCC	4 cut(s)	237, 498, 1854, 1870
BmrFI	CCNGG	4 cut(s)	843, 1002, 1062, 1496
BmrI	ACTGGG	2 cut(s)	349, 552
BmsI	GCATC	7 cut(s)	37, 43, 260, 522, 1129, 1222, 1429
BmtI	GCTAGC	1 cut(s)	1389
BmuI	ACTGGG	2 cut(s)	349, 552
BpiI	GAAGAC	1 cut(s)	141
BplI	GAGNNNNNCTC	2 cut(s)	1208, 1240
BpmI	CTGGAG	1 cut(s)	1628
Bpu10I	CCTNAGC	1 cut(s)	1477
BpuEI	CTTGAG	4 cut(s)	1128, 1210, 1321, 1853
BpuMI	CCSGG	1 cut(s)	1496
Bsa29I	ATCGAT	1 cut(s)	1437
BsaBI	GATNNNNATC	1 cut(s)	728
BsaHI	GRCGYC	1 cut(s)	1853
BsaI	GGTCTC	2 cut(s)	480, 859
BsaXI	ACNNNNNCTCC	6 cut(s)	903, 933, 1739, 1769, 1861, 1891
Bsc4I	CCNNNNNNNGG	1 cut(s)	842
Bse1I	ACTGG	7 cut(s)	59, 344, 446, 558, 917, 1553, 1611
Bse3DI	GCAATG	3 cut(s)	344, 1076, 1408
Bse8I	GATNNNNATC	1 cut(s)	728
BseBI	CCWGG	3 cut(s)	843, 1002, 1062
BseCI	ATCGAT	1 cut(s)	1437
BseGI	GGATG	6 cut(s)	34, 838, 1210, 1237, 1321, 1666
BseJI	GATNNNNATC	1 cut(s)	728
BseLI	CCNNNNNNNGG	1 cut(s)	842
BseMI	GCAATG	3 cut(s)	344, 1076, 1408
BseMII	CTCAG	2 cut(s)	440, 1904
BseNI	ACTGG	7 cut(s)	59, 344, 446, 558, 917, 1553, 1611
BseRI	GAGGAG	2 cut(s)	626, 1760
BseXI	GCAGC	2 cut(s)	810, 1924
BseYI	CCCAGC	1 cut(s)	771
BsgI	GTGCAG	1 cut(s)	756
BshFI	GGCC	3 cut(s)	439, 894, 1931
BshNI	GGYRCC	1 cut(s)	1852
BshVI	ATCGAT	1 cut(s)	1437
BsiSI	CCGG	2 cut(s)	548, 1496
BslFI	GGGAC	2 cut(s)	221, 1115
BslI	CCNNNNNNNGG	1 cut(s)	842
BsmAI	GTCTC	6 cut(s)	200, 480, 786, 791, 859, 1253
BsmBI	CGTCTC	1 cut(s)	791
BsmFI	GGGAC	2 cut(s)	221, 1115
BsmI	GAATGC	3 cut(s)	175, 385, 976
BsnI	GGCC	3 cut(s)	439, 894, 1931
Bso31I	GGTCTC	2 cut(s)	480, 859
Bsp143I	GATC	8 cut(s)	94, 496, 860, 1011, 1172, 1283, 1820, 1902
BspACI	CCGC	7 cut(s)	585, 1198, 1202, 1257, 1309, 1623, 1880
BspANI	GGCC	3 cut(s)	439, 894, 1931
BspCNI	CTCAG	2 cut(s)	439, 1903
BspDI	ATCGAT	1 cut(s)	1437
BspLI	GGNNCC	4 cut(s)	237, 498, 1854, 1870
BspMAI	CTGCAG	2 cut(s)	828, 1367
BspOI	GCTAGC	1 cut(s)	1389
BspPI	GGATC	6 cut(s)	491, 504, 1006, 1180, 1291, 1828
BspT107I	GGYRCC	1 cut(s)	1852
BspTNI	GGTCTC	2 cut(s)	480, 859
BsrDI	GCAATG	3 cut(s)	344, 1076, 1408
BsrI	ACTGG	7 cut(s)	59, 344, 446, 558, 917, 1553, 1611
BssMI	GATC	8 cut(s)	94, 496, 860, 1011, 1172, 1283, 1820, 1902
BssNI	GRCGYC	1 cut(s)	1853
Bst2UI	CCWGG	3 cut(s)	843, 1002, 1062
Bst4CI	ACNGT	3 cut(s)	187, 955, 1292
Bst6I	CTCTTC	4 cut(s)	1184, 1295, 1593, 1711
BstACI	GRCGYC	1 cut(s)	1853
BstAPI	GCANNNNNTGC	2 cut(s)	743, 823
BstC8I	GCNNGC	7 cut(s)	358, 932, 1109, 1200, 1344, 1387, 1839
BstDEI	CTNAG	5 cut(s)	9, 426, 1477, 1593, 1890
BstF5I	GGATG	6 cut(s)	34, 838, 1210, 1237, 1321, 1666
BstH2I	RGCGCY	1 cut(s)	1856
BstHHI	GCGC	2 cut(s)	1083, 1855
BstKTI	GATC	8 cut(s)	97, 499, 863, 1014, 1175, 1286, 1823, 1905
BstMAI	GTCTC	6 cut(s)	200, 480, 786, 791, 859, 1253
BstMBI	GATC	8 cut(s)	94, 496, 860, 1011, 1172, 1283, 1820, 1902
BstMWI	GCNNNNNNNGC	8 cut(s)	113, 394, 650, 659, 743, 823, 1760, 1937
BstNI	CCWGG	3 cut(s)	843, 1002, 1062
BstNSI	RCATGY	2 cut(s)	991, 1346
BstSCI	CCNGG	4 cut(s)	841, 1000, 1060, 1494
BstSFI	CTRYAG	5 cut(s)	164, 205, 824, 1252, 1363
BstV1I	GCAGC	2 cut(s)	810, 1924
BstV2I	GAAGAC	1 cut(s)	141
BstX2I	RGATCY	3 cut(s)	94, 496, 1011
BstYI	RGATCY	3 cut(s)	94, 496, 1011
Bsu15I	ATCGAT	1 cut(s)	1437
BsuI	GTATCC	2 cut(s)	664, 1030
BsuRI	GGCC	3 cut(s)	439, 894, 1931
BsuTUI	ATCGAT	1 cut(s)	1437
BtsCI	GGATG	6 cut(s)	34, 838, 1210, 1237, 1321, 1666
BtsI	GCAGTG	3 cut(s)	383, 833, 1372
BtsIMutI	CAGTG	7 cut(s)	85, 383, 434, 739, 833, 1297, 1372
Cac8I	GCNNGC	7 cut(s)	358, 932, 1109, 1200, 1344, 1387, 1839
CaiI	CAGNNNCTG	1 cut(s)	923
CfoI	GCGC	2 cut(s)	1083, 1855
Cfr13I	GGNCC	3 cut(s)	235, 892, 1625
ClaI	ATCGAT	1 cut(s)	1437
CseI	GACGC	2 cut(s)	281, 1743
Csp6I	GTAC	4 cut(s)	258, 591, 1604, 1794
CspCI	CAANNNNNGTGG	2 cut(s)	61, 96
CviAII	CATG	7 cut(s)	274, 451, 604, 988, 1025, 1343, 1629
CviQI	GTAC	4 cut(s)	258, 591, 1604, 1794
DdeI	CTNAG	5 cut(s)	9, 426, 1477, 1593, 1890
DinI	GGCGCC	1 cut(s)	1854
DpnI	GATC	8 cut(s)	96, 498, 862, 1013, 1174, 1285, 1822, 1904
DpnII	GATC	8 cut(s)	94, 496, 860, 1011, 1172, 1283, 1820, 1902
DriI	GACNNNNNGTC	1 cut(s)	1694
EaeI	YGGCCR	2 cut(s)	437, 1929
Eam1104I	CTCTTC	4 cut(s)	1184, 1295, 1593, 1711
Eam1105I	GACNNNNNGTC	1 cut(s)	1694
EarI	CTCTTC	4 cut(s)	1184, 1295, 1593, 1711
EciI	GGCGGA	2 cut(s)	1217, 1869
Eco31I	GGTCTC	2 cut(s)	480, 859
Eco47I	GGWCC	2 cut(s)	235, 1625
Eco57I	CTGAAG	9 cut(s)	39, 153, 397, 470, 824, 945, 1548, 1692, 1725
EcoRII	CCWGG	3 cut(s)	841, 1000, 1060
EcoT22I	ATGCAT	1 cut(s)	275
EgeI	GGCGCC	1 cut(s)	1854
EheI	GGCGCC	1 cut(s)	1854
Esp3I	CGTCTC	1 cut(s)	791
FaeI	CATG	7 cut(s)	277, 454, 607, 991, 1028, 1346, 1632
FaqI	GGGAC	2 cut(s)	221, 1115
FatI	CATG	7 cut(s)	273, 450, 603, 987, 1024, 1342, 1628
FauI	CCCGC	3 cut(s)	1191, 1250, 1302
FauNDI	CATATG	1 cut(s)	362
FblI	GTMKAC	1 cut(s)	1500
Fnu4HI	GCNGC	2 cut(s)	824, 1938
FokI	GGATG	6 cut(s)	21, 825, 1217, 1244, 1328, 1673
Fsp4HI	GCNGC	2 cut(s)	824, 1938
FspBI	CTAG	7 cut(s)	113, 398, 501, 570, 1134, 1386, 1769
GlaI	GCGC	2 cut(s)	1082, 1854
GluI	GCNGC	2 cut(s)	824, 1938
GsaI	CCCAGC	1 cut(s)	775
GsuI	CTGGAG	1 cut(s)	1628
HaeII	RGCGCY	1 cut(s)	1856
HaeIII	GGCC	3 cut(s)	439, 894, 1931
HapII	CCGG	2 cut(s)	548, 1496
HgaI	GACGC	2 cut(s)	281, 1743
HhaI	GCGC	2 cut(s)	1083, 1855
Hin1I	GRCGYC	1 cut(s)	1853
Hin1II	CATG	7 cut(s)	277, 454, 607, 991, 1028, 1346, 1632
Hin6I	GCGC	2 cut(s)	1081, 1853
HinP1I	GCGC	2 cut(s)	1081, 1853
HincII	GTYRAC	1 cut(s)	979
HindII	GTYRAC	1 cut(s)	979
HindIII	AAGCTT	1 cut(s)	1644
HinfI	GANTC	7 cut(s)	155, 683, 779, 1217, 1223, 1334, 1703
HpaII	CCGG	2 cut(s)	548, 1496
HphI	GGTGA	2 cut(s)	824, 857
Hpy166II	GTNNAC	5 cut(s)	794, 979, 1184, 1295, 1501
Hpy188III	TCNNGA	6 cut(s)	44, 131, 864, 1046, 1379, 1710
Hpy8I	GTNNAC	5 cut(s)	794, 979, 1184, 1295, 1501
Hpy99I	CGWCG	1 cut(s)	297
HpyAV	CCTTC	6 cut(s)	760, 920, 1120, 1157, 1256, 1884
HpyCH4III	ACNGT	3 cut(s)	187, 955, 1292
HpyCH4IV	ACGT	3 cut(s)	54, 263, 1464
HpyF10VI	GCNNNNNNNGC	8 cut(s)	113, 394, 650, 659, 743, 823, 1760, 1937
HpyF3I	CTNAG	5 cut(s)	9, 426, 1477, 1593, 1890
HpySE526I	ACGT	3 cut(s)	54, 263, 1464
Hsp92I	GRCGYC	1 cut(s)	1853
Hsp92II	CATG	7 cut(s)	277, 454, 607, 991, 1028, 1346, 1632
HspAI	GCGC	2 cut(s)	1081, 1853
KasI	GGCGCC	1 cut(s)	1852
Kzo9I	GATC	8 cut(s)	94, 496, 860, 1011, 1172, 1283, 1820, 1902
LmnI	GCTCC	1 cut(s)	1787
Lsp1109I	GCAGC	2 cut(s)	810, 1924
LweI	GCATC	7 cut(s)	37, 43, 260, 522, 1129, 1222, 1429
MaeI	CTAG	7 cut(s)	113, 398, 501, 570, 1134, 1386, 1769
MaeII	ACGT	3 cut(s)	54, 263, 1464
MaeIII	GTNAC	6 cut(s)	22, 211, 313, 830, 990, 1093
MalI	GATC	8 cut(s)	96, 498, 862, 1013, 1174, 1285, 1822, 1904
MboI	GATC	8 cut(s)	94, 496, 860, 1011, 1172, 1283, 1820, 1902
MflI	RGATCY	3 cut(s)	94, 496, 1011
MlsI	TGGCCA	2 cut(s)	439, 1931
MluCI	AATT	9 cut(s)	68, 222, 540, 633, 712, 962, 1470, 1774, 1915
MluNI	TGGCCA	2 cut(s)	439, 1931
Mly113I	GGCGCC	1 cut(s)	1853
MlyI	GAGTC	7 cut(s)	149, 692, 788, 1217, 1226, 1328, 1697
Mox20I	TGGCCA	2 cut(s)	439, 1931
Mph1103I	ATGCAT	1 cut(s)	275
MroXI	GAANNNNTTC	1 cut(s)	1873
MscI	TGGCCA	2 cut(s)	439, 1931
MseI	TTAA	2 cut(s)	266, 966
MslI	CAYNNNNRTG	1 cut(s)	843
Msp20I	TGGCCA	2 cut(s)	439, 1931
MspI	CCGG	2 cut(s)	548, 1496
MspR9I	CCNGG	4 cut(s)	843, 1002, 1062, 1496
Mva1269I	GAATGC	3 cut(s)	175, 385, 976
MvaI	CCWGG	3 cut(s)	843, 1002, 1062
MwoI	GCNNNNNNNGC	8 cut(s)	113, 394, 650, 659, 743, 823, 1760, 1937
NarI	GGCGCC	1 cut(s)	1853
NciI	CCSGG	1 cut(s)	1496
NdeI	CATATG	1 cut(s)	362
NdeII	GATC	8 cut(s)	94, 496, 860, 1011, 1172, 1283, 1820, 1902
NheI	GCTAGC	1 cut(s)	1385
NlaIII	CATG	7 cut(s)	277, 454, 607, 991, 1028, 1346, 1632
NlaIV	GGNNCC	4 cut(s)	237, 498, 1854, 1870
NmuCI	GTSAC	2 cut(s)	22, 830
NsiI	ATGCAT	1 cut(s)	275
NspI	RCATGY	2 cut(s)	991, 1346
PaeI	GCATGC	1 cut(s)	1346
PciI	ACATGT	1 cut(s)	987
PcsI	WCGNNNNNNNCGW	1 cut(s)	927
PctI	GAATGC	3 cut(s)	175, 385, 976
PdmI	GAANNNNTTC	1 cut(s)	1873
PkrI	GCNGC	2 cut(s)	825, 1939
PleI	GAGTC	7 cut(s)	149, 691, 787, 1217, 1225, 1328, 1697
PluTI	GGCGCC	1 cut(s)	1856
PpsI	GAGTC	7 cut(s)	149, 691, 787, 1217, 1225, 1328, 1697
PscI	ACATGT	1 cut(s)	987
Psp1406I	AACGTT	1 cut(s)	263
Psp6I	CCWGG	3 cut(s)	841, 1000, 1060
PspFI	CCCAGC	1 cut(s)	771
PspGI	CCWGG	3 cut(s)	841, 1000, 1060
PspN4I	GGNNCC	4 cut(s)	237, 498, 1854, 1870
PspPI	GGNCC	3 cut(s)	235, 892, 1625
PsrI	GAACNNNNNNTAC	2 cut(s)	557, 589
PstI	CTGCAG	2 cut(s)	828, 1367
PstNI	CAGNNNCTG	1 cut(s)	923
PsuI	RGATCY	3 cut(s)	94, 496, 1011
RsaI	GTAC	4 cut(s)	259, 592, 1605, 1795
RsaNI	GTAC	4 cut(s)	258, 591, 1604, 1794
RseI	CAYNNNNRTG	1 cut(s)	843
SaqAI	TTAA	2 cut(s)	266, 966
SatI	GCNGC	2 cut(s)	824, 1938
Sau3AI	GATC	8 cut(s)	94, 496, 860, 1011, 1172, 1283, 1820, 1902
Sau96I	GGNCC	3 cut(s)	235, 892, 1625
ScaI	AGTACT	1 cut(s)	592
SchI	GAGTC	7 cut(s)	149, 692, 788, 1217, 1226, 1328, 1697
ScrFI	CCNGG	4 cut(s)	843, 1002, 1062, 1496
SfaNI	GCATC	7 cut(s)	37, 43, 260, 522, 1129, 1222, 1429
SfcI	CTRYAG	5 cut(s)	164, 205, 824, 1252, 1363
SfoI	GGCGCC	1 cut(s)	1854
SinI	GGWCC	2 cut(s)	235, 1625
SmiMI	CAYNNNNRTG	1 cut(s)	843
SmlI	CTYRAG	4 cut(s)	1143, 1225, 1336, 1832
SmoI	CTYRAG	4 cut(s)	1143, 1225, 1336, 1832
SphI	GCATGC	1 cut(s)	1346
Sse9I	AATT	9 cut(s)	68, 222, 540, 633, 712, 962, 1470, 1774, 1915
SsiI	CCGC	7 cut(s)	585, 1198, 1202, 1257, 1309, 1623, 1880
SspDI	GGCGCC	1 cut(s)	1852
SspMI	CTAG	7 cut(s)	113, 398, 501, 570, 1134, 1386, 1769
StyD4I	CCNGG	4 cut(s)	841, 1000, 1060, 1494
TaaI	ACNGT	3 cut(s)	187, 955, 1292
TaiI	ACGT	3 cut(s)	57, 266, 1467
TaqI	TCGA	4 cut(s)	863, 1072, 1437, 1557
TasI	AATT	9 cut(s)	68, 222, 540, 633, 712, 962, 1470, 1774, 1915
TatI	WGTACW	1 cut(s)	590
Tru1I	TTAA	2 cut(s)	266, 966
Tru9I	TTAA	2 cut(s)	266, 966
TscAI	CASTG	7 cut(s)	85, 390, 434, 739, 833, 1297, 1372
TseFI	GTSAC	2 cut(s)	22, 830
TseI	GCWGC	2 cut(s)	823, 1937
Tsp45I	GTSAC	2 cut(s)	22, 830
TspDTI	ATGAA	9 cut(s)	80, 192, 578, 645, 863, 1386, 1401, 1733, 1914
TspGWI	ACGGA	6 cut(s)	245, 779, 1004, 1009, 1800, 1881
TspRI	CASTG	7 cut(s)	85, 390, 434, 739, 833, 1297, 1372
VpaK11BI	GGWCC	2 cut(s)	235, 1625
XapI	RAATTY	5 cut(s)	68, 222, 633, 962, 1915
XceI	RCATGY	2 cut(s)	991, 1346
XmiI	GTMKAC	1 cut(s)	1500
XmnI	GAANNNNTTC	1 cut(s)	1873
XspI	CTAG	7 cut(s)	113, 398, 501, 570, 1134, 1386, 1769
ZrmI	AGTACT	1 cut(s)	592
Zsp2I	ATGCAT	1 cut(s)	275

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.