pycom15g01440

Abhydrolase domain-containing protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
833536 .. 836775
3240 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1245 bp
ATGAACCTGCGTAGAATTTCGTCGAGAATGGCCGGCGAAGTCAGCAGGTCCGCCGAGCAACGAACCTCCCCTGCCGCCGTTGCTGCAGCCTACGAATCCGATGCTGTTGCTGCTGCGGTTAATCCCAAGTCCAAATCGTTTTGGCCCTCTGTCCTCCGTTGGATCCCTACATCCACCGATAAGATCATCGCCGCCGAGAAGCGCCTGCTCTCTCTTGTCAAGACTCCTTATGTTCAAGAACTGGTGAATATAGGATCTGGACCACCGGGCTCTAAAGTCAGGTGGTTTCGATCCGAAAGCAATGAAGAAAGGCTAATCAACACGGTTTCATTTGACAGCAAAGAGAATTCTCCTACTATTGTTATGCTTCACGGATACGGTGCTTCTCAAGGTTTCTTCTTTAGAAATTTCGATGCCCTTGCCAGTCGGTTCAGGGTCATTGCCATTGATCAAATAGGTTGGGGCGGATCAAGCAGGCCTGATTTTACATGTAAAAGCACTGAAGAAACTGAGGCATGGTTCATTGATTCCTTTGAGGAATGGCGAAAAGCCAAAAACCTCAGCAACTTTATATTACTTGGACATTCAGTTGGTGGGTATGTTGCATCAAAGTACACTCTGAAGCATCCAGAGCACGTTAAGCATTTGATTTTAGTGGGACCTGTCGGGTTTTCATCGGAGTCAGATGCATCGTATGAGAGGCTTAACCAATTCAAAGCAACATGGAAAGGAGCAATTTTCAACTATTTGTGGGAGTCTAATTTTACTCCACAGAAGTTAGTCAGAGGGCTAGGGCCTTTGGGTCCAAATCTCGTTCAGAGTTACACTACTGCCAGATTTGGTTCTTATTCAACAGGGACCGCACTAACTGAAGAGGAATCCCGACTTCTAACAGATTATGTGTACCATACTTTAGCAGCCAAAGCTAGTGGGGAGCTGTGCTTAAAGTACATATTTTCTTTCGGAGCATTTGCTAGGAGTCCCCTTATACAGAGTGCATCGGAGTGGAAAGTGCCGACTACTTTTATTTACGGATATCAAGACTGGGTGAACTACCAAGGGGCTCAAGAAGCTGGCAAAAAAATGAAGGTCCCATGTGAGATCATTAGGATTCCGGAAGCTGGGCACTTTGTATTCATAGACCAACCCGAACGATTCCATTCAGCTGTTTTTTACGCTTGCCGTAGATTTCTTTCGCAGGACCCTGAGGTTGAATCCTTTCCCGAAGGTTTGACAGCTGCCTGA

Protein Analysis

415

Amino Acids

46.33

Weight (kDa)

8.68

Isoelectric Point (pI)

47.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hydrolase_4 PF12146 117 - 252 5.4e-17 Serine aminopeptidase, S33
Abhydrolase_1 PF00561 118 - 383 1.9e-27 alpha/beta hydrolase fold
Abhydrolase_6 PF12697 120 - 387 3.6e-19 Alpha/beta hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 15, 36
AccIII TCCGGA 1 cut(s) 1114
AciI CCGC 6 cut(s) 51, 75, 116, 192, 465, 861
AclWI GGATC 5 cut(s) 157, 170, 262, 285, 475
AcoI YGGCCR 1 cut(s) 30
AcsI RAATTY 3 cut(s) 15, 346, 406
AcuI CTGAAG 3 cut(s) 522, 641, 891
AfaI GTAC 3 cut(s) 614, 905, 950
AfiI CCNNNNNNNGG 1 cut(s) 1121
AflIII ACRYGT 1 cut(s) 488
AgsI TTSAA 5 cut(s) 236, 715, 742, 852, 1214
AluBI AGCT 6 cut(s) 926, 937, 1073, 1121, 1166, 1238
AluI AGCT 6 cut(s) 926, 937, 1073, 1121, 1166, 1238
Alw21I GWGCWC 1 cut(s) 636
AlwI GGATC 5 cut(s) 157, 170, 262, 285, 475
Aor13HI TCCGGA 1 cut(s) 1114
AoxI GGCC 4 cut(s) 30, 143, 476, 794
ApeKI GCWGC 6 cut(s) 83, 86, 110, 113, 917, 1238
ApoI RAATTY 3 cut(s) 15, 346, 406
Asp700I GAANNNNTTC 1 cut(s) 1218
AspLEI GCGC 1 cut(s) 204
AspS9I GGNCC 9 cut(s) 48, 144, 260, 659, 794, 803, 858, 1090, 1201
AsuC2I CCSGG 1 cut(s) 267
AsuHPI GGTGA 2 cut(s) 256, 1060
AvaII GGWCC 7 cut(s) 48, 260, 659, 803, 858, 1090, 1201
AxyI CCTNAGG 1 cut(s) 1206
BaeGI GKGCMC 1 cut(s) 1128
BamHI GGATCC 1 cut(s) 162
BanII GRGCYC 2 cut(s) 272, 1066
Bbv12I GWGCWC 1 cut(s) 636
BbvCI CCTCAGC 1 cut(s) 560
BbvI GCAGC 6 cut(s) 70, 97, 98, 100, 929, 1225
BceAI ACGGC 2 cut(s) 62, 1167
BcgI CGANNNNNNTGC 6 cut(s) 83, 89, 117, 123, 401, 435
BciVI GTATCC 1 cut(s) 368
BclI TGATCA 1 cut(s) 448
BcnI CCSGG 1 cut(s) 267
BfaI CTAG 3 cut(s) 791, 927, 975
BfmI CTRYAG 1 cut(s) 84
BfoI RGCGCY 1 cut(s) 205
BfuAI ACCTGC 2 cut(s) 15, 36
BfuI GTATCC 1 cut(s) 368
BisI GCNGC 8 cut(s) 75, 84, 87, 111, 114, 192, 918, 1239
BlsI GCNGC 8 cut(s) 76, 85, 88, 112, 115, 193, 919, 1240
Bme1390I CCNGG 1 cut(s) 267
Bme18I GGWCC 7 cut(s) 48, 260, 659, 803, 858, 1090, 1201
BmgT120I GGNCC 9 cut(s) 48, 144, 260, 659, 794, 803, 858, 1090, 1201
BmiI GGNNCC 6 cut(s) 164, 660, 804, 859, 1092, 1203
BmrFI CCNGG 1 cut(s) 267
BmrI ACTGGG 1 cut(s) 1054
BmsI GCATC 7 cut(s) 91, 403, 614, 634, 676, 698, 1007
BmuI ACTGGG 1 cut(s) 1054
Bpu10I CCTNAGC 1 cut(s) 560
BpuEI CTTGAG 2 cut(s) 372, 1050
BpuMI CCSGG 1 cut(s) 267
BsaJI CCNNGG 1 cut(s) 1057
BsaWI WCCGGW 1 cut(s) 1114
Bsc4I CCNNNNNNNGG 1 cut(s) 1121
Bse118I RCCGGY 1 cut(s) 32
Bse1I ACTGG 3 cut(s) 246, 423, 1049
Bse21I CCTNAGG 1 cut(s) 1206
Bse3DI GCAATG 2 cut(s) 307, 438
BseAI TCCGGA 1 cut(s) 1114
BseDI CCNNGG 1 cut(s) 1057
BseGI GGATG 2 cut(s) 170, 625
BseLI CCNNNNNNNGG 1 cut(s) 1121
BseMI GCAATG 2 cut(s) 307, 438
BseMII CTCAG 3 cut(s) 501, 574, 1197
BseNI ACTGG 3 cut(s) 246, 423, 1049
BseSI GKGCMC 1 cut(s) 1128
BseXI GCAGC 6 cut(s) 70, 97, 98, 100, 929, 1225
BseYI CCCAGC 1 cut(s) 1121
BshFI GGCC 4 cut(s) 32, 145, 478, 796
BsiHKAI GWGCWC 1 cut(s) 636
BsiSI CCGG 3 cut(s) 33, 266, 1115
BslFI GGGAC 4 cut(s) 672, 871, 966, 1076
BslI CCNNNNNNNGG 1 cut(s) 1121
BsmFI GGGAC 4 cut(s) 672, 871, 966, 1076
BsnI GGCC 4 cut(s) 32, 145, 478, 796
Bsp1286I GDGCHC 4 cut(s) 272, 636, 1066, 1128
Bsp13I TCCGGA 1 cut(s) 1114
Bsp143I GATC 7 cut(s) 162, 183, 254, 290, 448, 467, 1101
BspACI CCGC 6 cut(s) 51, 75, 116, 192, 465, 861
BspANI GGCC 4 cut(s) 32, 145, 478, 796
BspCNI CTCAG 3 cut(s) 502, 573, 1198
BspEI TCCGGA 1 cut(s) 1114
BspLI GGNNCC 6 cut(s) 164, 660, 804, 859, 1092, 1203
BspMAI CTGCAG 1 cut(s) 88
BspMI ACCTGC 2 cut(s) 15, 36
BspPI GGATC 5 cut(s) 157, 170, 262, 285, 475
BsrDI GCAATG 2 cut(s) 307, 438
BsrFI RCCGGY 1 cut(s) 32
BsrI ACTGG 3 cut(s) 246, 423, 1049
BssAI RCCGGY 1 cut(s) 32
BssECI CCNNGG 1 cut(s) 1057
BssMI GATC 7 cut(s) 162, 183, 254, 290, 448, 467, 1101
BssT1I CCWWGG 1 cut(s) 1057
Bst4CI ACNGT 2 cut(s) 325, 380
Bst6I CTCTTC 1 cut(s) 867
BstC8I GCNNGC 5 cut(s) 34, 206, 476, 1075, 1180
BstDEI CTNAG 3 cut(s) 510, 560, 1206
BstF5I GGATG 2 cut(s) 170, 625
BstH2I RGCGCY 1 cut(s) 205
BstHHI GCGC 1 cut(s) 204
BstKTI GATC 7 cut(s) 165, 186, 257, 293, 451, 470, 1104
BstMBI GATC 7 cut(s) 162, 183, 254, 290, 448, 467, 1101
BstMWI GCNNNNNNNGC 9 cut(s) 42, 80, 83, 110, 471, 631, 640, 923, 1070
BstNSI RCATGY 1 cut(s) 492
BstSCI CCNGG 1 cut(s) 265
BstSFI CTRYAG 1 cut(s) 84
BstSLI GKGCMC 1 cut(s) 1128
BstV1I GCAGC 6 cut(s) 70, 97, 98, 100, 929, 1225
BstX2I RGATCY 2 cut(s) 162, 254
BstYI RGATCY 2 cut(s) 162, 254
Bsu36I CCTNAGG 1 cut(s) 1206
BsuI GTATCC 1 cut(s) 368
BsuRI GGCC 4 cut(s) 32, 145, 478, 796
BtgZI GCGATG 1 cut(s) 172
BtsCI GGATG 2 cut(s) 170, 625
BtsIMutI CAGTG 1 cut(s) 498
BveI ACCTGC 2 cut(s) 15, 36
Cac8I GCNNGC 5 cut(s) 34, 206, 476, 1075, 1180
CfoI GCGC 1 cut(s) 204
Cfr10I RCCGGY 1 cut(s) 32
Cfr13I GGNCC 9 cut(s) 48, 144, 260, 659, 794, 803, 858, 1090, 1201
Csp6I GTAC 3 cut(s) 613, 904, 949
CspCI CAANNNNNGTGG 2 cut(s) 910, 945
CviAII CATG 4 cut(s) 489, 516, 723, 1095
CviQI GTAC 3 cut(s) 613, 904, 949
DdeI CTNAG 3 cut(s) 510, 560, 1206
DpnI GATC 7 cut(s) 164, 185, 256, 292, 450, 469, 1103
DpnII GATC 7 cut(s) 162, 183, 254, 290, 448, 467, 1101
EaeI YGGCCR 1 cut(s) 30
Eam1104I CTCTTC 1 cut(s) 867
EarI CTCTTC 1 cut(s) 867
EciI GGCGGA 2 cut(s) 40, 480
Eco130I CCWWGG 1 cut(s) 1057
Eco147I AGGCCT 1 cut(s) 478
Eco24I GRGCYC 2 cut(s) 272, 1066
Eco32I GATATC 1 cut(s) 1037
Eco47I GGWCC 7 cut(s) 48, 260, 659, 803, 858, 1090, 1201
Eco57I CTGAAG 3 cut(s) 522, 641, 891
Eco81I CCTNAGG 1 cut(s) 1206
EcoO109I RGGNCCY 4 cut(s) 659, 794, 1090, 1201
EcoRI GAATTC 1 cut(s) 346
EcoRV GATATC 1 cut(s) 1037
EcoT14I CCWWGG 1 cut(s) 1057
EcoT22I ATGCAT 1 cut(s) 691
EcoT38I GRGCYC 2 cut(s) 272, 1066
ErhI CCWWGG 1 cut(s) 1057
FaeI CATG 4 cut(s) 492, 519, 726, 1098
FaqI GGGAC 4 cut(s) 672, 871, 966, 1076
FatI CATG 4 cut(s) 488, 515, 722, 1094
FbaI TGATCA 1 cut(s) 448
Fnu4HI GCNGC 8 cut(s) 75, 84, 87, 111, 114, 192, 918, 1239
FokI GGATG 2 cut(s) 157, 612
FriOI GRGCYC 2 cut(s) 272, 1066
Fsp4HI GCNGC 8 cut(s) 75, 84, 87, 111, 114, 192, 918, 1239
FspBI CTAG 3 cut(s) 791, 927, 975
GlaI GCGC 1 cut(s) 203
GluI GCNGC 8 cut(s) 75, 84, 87, 111, 114, 192, 918, 1239
GsaI CCCAGC 1 cut(s) 1125
HaeII RGCGCY 1 cut(s) 205
HaeIII GGCC 4 cut(s) 32, 145, 478, 796
HapII CCGG 3 cut(s) 33, 266, 1115
HhaI GCGC 1 cut(s) 204
Hin1II CATG 4 cut(s) 492, 519, 726, 1098
Hin6I GCGC 1 cut(s) 202
HinP1I GCGC 1 cut(s) 202
HpaII CCGG 3 cut(s) 33, 266, 1115
HphI GGTGA 2 cut(s) 256, 1060
Hpy166II GTNNAC 3 cut(s) 615, 904, 1051
Hpy188I TCNGA 9 cut(s) 100, 295, 621, 679, 685, 785, 819, 965, 1003
Hpy8I GTNNAC 3 cut(s) 615, 904, 1051
Hpy99I CGWCG 1 cut(s) 25
HpyAV CCTTC 2 cut(s) 1081, 1220
HpyCH4III ACNGT 2 cut(s) 325, 380
HpyCH4IV ACGT 1 cut(s) 636
HpyCH4V TGCA 4 cut(s) 86, 605, 689, 998
HpyF10VI GCNNNNNNNGC 9 cut(s) 42, 80, 83, 110, 471, 631, 640, 923, 1070
HpyF3I CTNAG 3 cut(s) 510, 560, 1206
HpySE526I ACGT 1 cut(s) 636
Hsp92II CATG 4 cut(s) 492, 519, 726, 1098
HspAI GCGC 1 cut(s) 202
Kpn2I TCCGGA 1 cut(s) 1114
KroI GCCGGC 1 cut(s) 32
KroNI GCCGGC 1 cut(s) 34
Ksp22I TGATCA 1 cut(s) 448
Kzo9I GATC 7 cut(s) 162, 183, 254, 290, 448, 467, 1101
LmnI GCTCC 3 cut(s) 731, 934, 965
Lsp1109I GCAGC 6 cut(s) 70, 97, 98, 100, 929, 1225
LweI GCATC 7 cut(s) 91, 403, 614, 634, 676, 698, 1007
MaeI CTAG 3 cut(s) 791, 927, 975
MaeII ACGT 1 cut(s) 636
MaeIII GTNAC 1 cut(s) 821
MalI GATC 7 cut(s) 164, 185, 256, 292, 450, 469, 1103
MboI GATC 7 cut(s) 162, 183, 254, 290, 448, 467, 1101
MboII GAAGA 4 cut(s) 317, 388, 515, 884
MflI RGATCY 2 cut(s) 162, 254
MhlI GDGCHC 4 cut(s) 272, 636, 1066, 1128
MluCI AATT 6 cut(s) 15, 346, 406, 710, 735, 760
MlyI GAGTC 4 cut(s) 217, 689, 764, 988
MmeI TCCRAC 1 cut(s) 140
Mph1103I ATGCAT 1 cut(s) 691
MroI TCCGGA 1 cut(s) 1114
MroNI GCCGGC 1 cut(s) 32
MroXI GAANNNNTTC 1 cut(s) 1218
MseI TTAA 4 cut(s) 120, 639, 705, 944
MslI CAYNNNNRTG 1 cut(s) 1003
MspA1I CMGCKG 2 cut(s) 1166, 1238
MspI CCGG 3 cut(s) 33, 266, 1115
MspR9I CCNGG 1 cut(s) 267
MwoI GCNNNNNNNGC 9 cut(s) 42, 80, 83, 110, 471, 631, 640, 923, 1070
NaeI GCCGGC 1 cut(s) 34
NciI CCSGG 1 cut(s) 267
NdeII GATC 7 cut(s) 162, 183, 254, 290, 448, 467, 1101
NgoMIV GCCGGC 1 cut(s) 32
NlaIII CATG 4 cut(s) 492, 519, 726, 1098
NlaIV GGNNCC 6 cut(s) 164, 660, 804, 859, 1092, 1203
NmeAIII GCCGAG 2 cut(s) 79, 220
NsiI ATGCAT 1 cut(s) 691
NspI RCATGY 1 cut(s) 492
PceI AGGCCT 1 cut(s) 478
PciI ACATGT 1 cut(s) 488
PdiI GCCGGC 1 cut(s) 34
PdmI GAANNNNTTC 1 cut(s) 1218
PfeI GAWTC 6 cut(s) 95, 527, 878, 1111, 1155, 1214
PkrI GCNGC 8 cut(s) 76, 85, 88, 112, 115, 193, 919, 1240
PleI GAGTC 4 cut(s) 217, 688, 763, 987
PpsI GAGTC 4 cut(s) 217, 688, 763, 987
PpuMI RGGWCCY 3 cut(s) 659, 1090, 1201
PscI ACATGT 1 cut(s) 488
Psp5II RGGWCCY 3 cut(s) 659, 1090, 1201
PspFI CCCAGC 1 cut(s) 1121
PspN4I GGNNCC 6 cut(s) 164, 660, 804, 859, 1092, 1203
PspPI GGNCC 9 cut(s) 48, 144, 260, 659, 794, 803, 858, 1090, 1201
PspPPI RGGWCCY 3 cut(s) 659, 1090, 1201
PstI CTGCAG 1 cut(s) 88
PsuI RGATCY 2 cut(s) 162, 254
PvuII CAGCTG 2 cut(s) 1166, 1238
RsaI GTAC 3 cut(s) 614, 905, 950
RsaNI GTAC 3 cut(s) 613, 904, 949
RseI CAYNNNNRTG 1 cut(s) 1003
SaqAI TTAA 4 cut(s) 120, 639, 705, 944
SatI GCNGC 8 cut(s) 75, 84, 87, 111, 114, 192, 918, 1239
Sau3AI GATC 7 cut(s) 162, 183, 254, 290, 448, 467, 1101
Sau96I GGNCC 9 cut(s) 48, 144, 260, 659, 794, 803, 858, 1090, 1201
SchI GAGTC 4 cut(s) 217, 689, 764, 988
ScrFI CCNGG 1 cut(s) 267
SduI GDGCHC 4 cut(s) 272, 636, 1066, 1128
SfaNI GCATC 7 cut(s) 91, 403, 614, 634, 676, 698, 1007
SfcI CTRYAG 1 cut(s) 84
SinI GGWCC 7 cut(s) 48, 260, 659, 803, 858, 1090, 1201
SmiMI CAYNNNNRTG 1 cut(s) 1003
SmlI CTYRAG 2 cut(s) 387, 1065
SmoI CTYRAG 2 cut(s) 387, 1065
Sse9I AATT 6 cut(s) 15, 346, 406, 710, 735, 760
SseBI AGGCCT 1 cut(s) 478
SsiI CCGC 6 cut(s) 51, 75, 116, 192, 465, 861
SspMI CTAG 3 cut(s) 791, 927, 975
StuI AGGCCT 1 cut(s) 478
StyD4I CCNGG 1 cut(s) 265
StyI CCWWGG 1 cut(s) 1057
TaaI ACNGT 2 cut(s) 325, 380
TaiI ACGT 1 cut(s) 639
TaqI TCGA 3 cut(s) 23, 289, 411
TasI AATT 6 cut(s) 15, 346, 406, 710, 735, 760
TatI WGTACW 2 cut(s) 612, 948
TauI GCSGC 2 cut(s) 77, 194
TfiI GAWTC 6 cut(s) 95, 527, 878, 1111, 1155, 1214
Tru1I TTAA 4 cut(s) 120, 639, 705, 944
Tru9I TTAA 4 cut(s) 120, 639, 705, 944
TscAI CASTG 1 cut(s) 505
TseI GCWGC 6 cut(s) 83, 86, 110, 113, 917, 1238
TspDTI ATGAA 7 cut(s) 17, 318, 318, 511, 663, 1100, 1126
TspGWI ACGGA 3 cut(s) 146, 387, 1047
TspRI CASTG 1 cut(s) 505
VpaK11BI GGWCC 7 cut(s) 48, 260, 659, 803, 858, 1090, 1201
XapI RAATTY 3 cut(s) 15, 346, 406
XceI RCATGY 1 cut(s) 492
XmnI GAANNNNTTC 1 cut(s) 1218
XspI CTAG 3 cut(s) 791, 927, 975
Zsp2I ATGCAT 1 cut(s) 691
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.