Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0011531

Physical Location & Seq

Genomic Coordinates Forward (+)

2259657 .. 2262582

Gene Structure 2926 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2223 bp

ATGGTAAAGGAAGAGGGAAGAGAGTCGCGCGGTAAAGTGGGTGGTACCGTGGTGGGGAAGTTTCGTACATGGACTGGTCCCTGGCTAGCTTCTCCTTTATGTGAAAAAAGAAACGACTTTTGGGTTTCTCTGAGGTGGCATGCTGCAACCTTACCATGTTCCCATTGCCACTTAGCAAATATTACTTTTCTTCCAATTCCATTTTTAATTACCACAATGATTAGCTATAGGGGATTAGAGAAGACTCGTTTAAAATTAATGAAAACTATTTTCCAAGATGTTTTATGTAGTGTTAAGTTGAAATATATACAGTCAAAGACGTTCATGAATGGAAAAGCTCTTTGCCTTTTGCCATTAACATCAAAAAAAGAAACCATAGATGATAGGTTCTTGTTTCAAGCCTATTGCGAGGAAGAAAACTTTGATGCCTACATGTTATATGTATATTTTTTTTCTCTTTTAATTGGTAAAATACAACCAAAACTCTTAAGGAAATTAAATTCCAAATATAACATCATCAATTCACCAAAATTTGGGTTTGTAACTGTTGCTTTTGAATCTTCATTTCTGTTGATAAAAAGATGCGTTTTTAAAAGTCTTCGAAAAAAGTTATTAGAAGATGAATATATATACAAAATACGTTTACACCCTGAAAGCAAATCTAAACAAGCCACGTTTCTTTTTCTTTCCTTGTTTTATAAGCAAAGCGTCAAGATCCTCGAACAAACATATTGGACCCCATCGCCAGGCCAAAAAGAAACATTCACAGCACTACTTACGTACGACGTCAATGTGCTGACGTTGCAGGTTACATGTTTTATCAGAACGTCACTCGTGATCATTTCATACATATTTTTCCAACACACGGATTTGATTTCAATATTATTCAATTTAAATTCTGCTCATATCAATTGTGAAATTTCCTTTAATTTAACGGATAAGATTCAAGACCTCAACCCCTACCCTAAATCTATATATATATATGTGTGTGTGTGTGTGTGTAGGTTAAGGACCTTTGGTTATATACACCCGTCTGCAGATAGCATATTGTTTTCCTTCCCAGCTTTTGAATCTTTACATCAACTTATCTGTATCTATAAACATGGATGCTCGTACTGTTTTTCATTTCTGGGTAATAACCGAGCGAATAAAACCTTGAACCCCAGACATAGTGATTTTCACACATTTTTTTACAAGCAAAATCAACAATCAGAATTAAAAGAGTGTGAAAATCATGTATCTGTATATAGGAGTTTTTTATTTTGTAAGCCTAACAAGCATAATCTTAACTCATTTACCCACGGACTTTCTTCCATGCTTCGCACGACTTGGGATCATGATCAGGTTGTGGATAGTGTTCAAGAAGACTTACAACGTTTGAGGAATGAGAATGCAACCCTAAGATTCCTGCTTCAAGCTATGACCACCAGATGCTCTATACTTGAGCAGAAGCACCACCACCACCACCAAATGCATATCCAACAACAACCGTGTGATCATCAGCAAATGCTCAACAGTGCGATTACGAGCAAGAGACCGAGAACTGATGATCATTGCGATCAGTTTCCGGCATCCCACCATAAGACATCACAGTTCCTAGTAAAAACCGACTCTAAAGACAACAGCCTTGTAAGTCAAGTCCTCCCTTTATATATAATATTGAAAATTATATATAAACCTAAAAGCATTAGGATTGTGAAAGATGGATATCAATGGAGGAAATATGGACAGAAGGTCACCAAAGACAACCCTTCATCCCCTCGAGCTTATTTCAGGTGTTCCTTCGCTCCTCGATGCCCTGTCAAAAAGAAGGTACAGAGATCCATGGAGGATAACTCCTTCCTCATGGTGACATACGAAGGAGAGCACAACCACGACACCATTAATGATTCACTACTATTTGGACAATTTGCATGTTCAGTAGCTGCAGGTGCTGATCTTCAGAACATTATTATGCCCATTAGTGTTCCTTCAAGTAGTATCGAGCCTAATAATGACGTGATTAATATAAGTTCCTCTCCACCGGAGACTGTAACCCTTGATCTTAATCTCTCGGGCTCGACTAATCAAGAAAATGGAGCATTAGGAAGCCCTCAAAGCATGAATTGCGACAGAAGAGTTGAGGATTTCATTGCTTCGTTAACCAAGGATCCCAATTTCACACAGGCTTTAGCTGCGGCAGTTGCACGCTCGATTACAGGACCTGCAGACAGACCAAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002237 GO:0003674 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009719 GO:0009725 GO:0009751 GO:0009889 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0014070 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031347 GO:0042221 GO:0042493 GO:0042742 GO:0042802 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046677 GO:0048583 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0080090 GO:0080134 GO:0098542 GO:0140110 GO:1901698 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WRKY

Protein Analysis

741

Amino Acids

85.16

Weight (kDa)

9.09

Isoelectric Point (pI)

45.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WRKY	PF03106	567 - 626	1.8e-23	WRKY DNA -binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0011531)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g41070 FvH4_2g41070 FvH4_2g41070
malus_domestica	MD00G1143600.v1.1 MD15G1039600.v1.1
prunus_persica	Prupe.1G393100_v2.0.a1
pyrus_communis	pycom08g04720 pycom08g04730 pycom08g04740 pycom15g03700
rosa_chinensis	RchiOBHm_Chr6g0299481
rosa_laevigata	RLG00000011428
rosa_multiflora	Rmu_sc0001184.1_g000007
rosa_roxburghii	Rroxscaffold_7G00168640
rosa_rugosa	Rorug06G0289100
rosa_samantha	Rh6AG400400 Rh6BG409100 Rh6CG414600 Rh6DG401500
rosa_wichuraiana	Rw6G035050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	699
AarI	CACCTGC	1 cut(s)	1919
AatII	GACGTC	1 cut(s)	789
Acc36I	ACCTGC	3 cut(s)	796, 1919, 2212
Acc65I	GGTACC	1 cut(s)	44
AccB1I	GGYRCC	1 cut(s)	44
AccB7I	CCANNNNNTGG	1 cut(s)	533
AccII	CGCG	2 cut(s)	28, 30
AciI	CCGC	2 cut(s)	30, 2177
AclI	AACGTT	1 cut(s)	1375
AclWI	GGATC	5 cut(s)	709, 1341, 1815, 2144, 2157
AcsI	RAATTY	4 cut(s)	499, 530, 895, 918
AcuI	CTGAAG	1 cut(s)	1925
AcyI	GRCGYC	1 cut(s)	786
AfaI	GTAC	5 cut(s)	46, 67, 782, 1115, 1815
AfiI	CCNNNNNNNGG	4 cut(s)	54, 533, 746, 865
AflII	CTTAAG	1 cut(s)	487
AflIII	ACRYGT	2 cut(s)	432, 812
AhdI	GACNNNNNGTC	1 cut(s)	1733
AjiI	CACGTC	1 cut(s)	1999
AjnI	CCWGG	2 cut(s)	80, 745
AjuI	GAANNNNNNNTTGG	2 cut(s)	103, 135
AluBI	AGCT	8 cut(s)	89, 225, 338, 1064, 1418, 1766, 1925, 2174
AluI	AGCT	8 cut(s)	89, 225, 338, 1064, 1418, 1766, 1925, 2174
Alw21I	GWGCWC	1 cut(s)	1869
Alw26I	GTCTC	2 cut(s)	1528, 2021
AlwI	GGATC	5 cut(s)	709, 1341, 1815, 2144, 2157
AlwNI	CAGNNNCTG	3 cut(s)	1925, 1934, 2204
Ama87I	CYCGRG	2 cut(s)	1761, 2053
AoxI	GGCC	1 cut(s)	748
ApeKI	GCWGC	3 cut(s)	143, 1925, 2174
ApoI	RAATTY	4 cut(s)	499, 530, 895, 918
AseI	ATTAAT	3 cut(s)	257, 1884, 2004
Asp718I	GGTACC	1 cut(s)	44
AspLEI	GCGC	1 cut(s)	30
AspS9I	GGNCC	4 cut(s)	77, 735, 1011, 2201
AsuHPI	GGTGA	3 cut(s)	516, 1729, 1861
AsuII	TTCGAA	1 cut(s)	601
AsuNHI	GCTAGC	1 cut(s)	85
AvaI	CYCGRG	2 cut(s)	1761, 2053
AvaII	GGWCC	4 cut(s)	77, 735, 1011, 2201
BaeI	ACNNNNGTAYC	2 cut(s)	36, 69
BamHI	GGATCC	1 cut(s)	2149
BanI	GGYRCC	1 cut(s)	44
BanII	GRGCYC	1 cut(s)	2060
BauI	CACGAG	1 cut(s)	833
BbsI	GAAGAC	3 cut(s)	248, 590, 1371
Bbv12I	GWGCWC	1 cut(s)	1869
BbvI	GCAGC	3 cut(s)	130, 1912, 2161
BccI	CCATC	2 cut(s)	748, 1697
BciT130I	CCWGG	2 cut(s)	82, 747
BclI	TGATCA	4 cut(s)	837, 1339, 1495, 1549
BcoDI	GTCTC	2 cut(s)	1528, 2021
BfaI	CTAG	2 cut(s)	86, 1598
BfmI	CTRYAG	4 cut(s)	226, 1035, 1926, 2205
BfrI	CTTAAG	1 cut(s)	487
BfuAI	ACCTGC	3 cut(s)	796, 1919, 2212
BisI	GCNGC	4 cut(s)	144, 1926, 2175, 2178
BlsI	GCNGC	4 cut(s)	145, 1927, 2176, 2179
Bme1390I	CCNGG	2 cut(s)	82, 747
Bme18I	GGWCC	4 cut(s)	77, 735, 1011, 2201
BmeRI	GACNNNNNGTC	1 cut(s)	1733
BmeT110I	CYCGRG	2 cut(s)	1761, 2053
BmgBI	CACGTC	1 cut(s)	1999
BmgT120I	GGNCC	4 cut(s)	77, 735, 1011, 2201
BmiI	GGNNCC	4 cut(s)	46, 79, 737, 2151
BmrFI	CCNGG	2 cut(s)	82, 747
BmsI	GCATC	6 cut(s)	415, 572, 1097, 1421, 1580, 1784
BmtI	GCTAGC	1 cut(s)	89
BpiI	GAAGAC	3 cut(s)	248, 590, 1371
BplI	GAGNNNNNCTC	2 cut(s)	1820, 1852
Bpu14I	TTCGAA	1 cut(s)	601
BpuEI	CTTGAG	1 cut(s)	1463
BsaAI	YACGTR	1 cut(s)	780
BsaBI	GATNNNNATC	3 cut(s)	1338, 1707, 2046
BsaHI	GRCGYC	1 cut(s)	786
BsaI	GGTCTC	1 cut(s)	1528
BsaJI	CCNNGG	5 cut(s)	48, 80, 1300, 1824, 2145
BsaWI	WCCGGW	1 cut(s)	2023
Bsc4I	CCNNNNNNNGG	4 cut(s)	54, 533, 746, 865
Bse1I	ACTGG	1 cut(s)	79
Bse3DI	GCAATG	3 cut(s)	163, 1552, 2130
Bse8I	GATNNNNATC	3 cut(s)	1338, 1707, 2046
BseBI	CCWGG	2 cut(s)	82, 747
BseDI	CCNNGG	5 cut(s)	48, 80, 1300, 1824, 2145
BseGI	GGATG	3 cut(s)	1112, 1571, 1754
BseJI	GATNNNNATC	3 cut(s)	1338, 1707, 2046
BseLI	CCNNNNNNNGG	4 cut(s)	54, 533, 746, 865
BseMI	GCAATG	3 cut(s)	163, 1552, 2130
BseMII	CTCAG	1 cut(s)	122
BseNI	ACTGG	1 cut(s)	79
BseRI	GAGGAG	1 cut(s)	1779
BseXI	GCAGC	3 cut(s)	130, 1912, 2161
BseYI	CCCAGC	1 cut(s)	1060
Bsh1236I	CGCG	2 cut(s)	28, 30
BshFI	GGCC	1 cut(s)	750
BshNI	GGYRCC	1 cut(s)	44
BsiHKAI	GWGCWC	1 cut(s)	1869
BsiHKCI	CYCGRG	2 cut(s)	1761, 2053
BsiSI	CCGG	2 cut(s)	1568, 2024
BsiWI	CGTACG	1 cut(s)	780
BslFI	GGGAC	1 cut(s)	63
BslI	CCNNNNNNNGG	4 cut(s)	54, 533, 746, 865
BsmAI	GTCTC	2 cut(s)	1528, 2021
BsmFI	GGGAC	1 cut(s)	63
BsmI	GAATGC	1 cut(s)	1396
BsnI	GGCC	1 cut(s)	750
Bso31I	GGTCTC	1 cut(s)	1528
BsoBI	CYCGRG	2 cut(s)	1761, 2053
Bsp119I	TTCGAA	1 cut(s)	601
Bsp1286I	GDGCHC	2 cut(s)	1869, 2060
Bsp19I	CCATGG	1 cut(s)	1824
BspACI	CCGC	2 cut(s)	30, 2177
BspANI	GGCC	1 cut(s)	750
BspCNI	CTCAG	1 cut(s)	123
BspFNI	CGCG	2 cut(s)	28, 30
BspHI	TCATGA	2 cut(s)	324, 1336
BspLI	GGNNCC	4 cut(s)	46, 79, 737, 2151
BspMAI	CTGCAG	3 cut(s)	1039, 1930, 2209
BspMI	ACCTGC	3 cut(s)	796, 1919, 2212
BspOI	GCTAGC	1 cut(s)	89
BspPI	GGATC	5 cut(s)	709, 1341, 1815, 2144, 2157
BspT104I	TTCGAA	1 cut(s)	601
BspT107I	GGYRCC	1 cut(s)	44
BspTI	CTTAAG	1 cut(s)	487
BspTNI	GGTCTC	1 cut(s)	1528
BsrDI	GCAATG	3 cut(s)	163, 1552, 2130
BsrI	ACTGG	1 cut(s)	79
BssECI	CCNNGG	5 cut(s)	48, 80, 1300, 1824, 2145
BssNI	GRCGYC	1 cut(s)	786
BssSI	CACGAG	1 cut(s)	833
BssT1I	CCWWGG	2 cut(s)	1824, 2145
Bst2BI	CACGAG	1 cut(s)	833
Bst2UI	CCWGG	2 cut(s)	82, 747
Bst4CI	ACNGT	8 cut(s)	49, 312, 547, 1118, 1491, 1517, 1593, 2032
Bst6I	CTCTTC	3 cut(s)	6, 13, 2110
BstACI	GRCGYC	1 cut(s)	786
BstAFI	CTTAAG	1 cut(s)	487
BstAPI	GCANNNNNTGC	1 cut(s)	2106
BstBAI	YACGTR	1 cut(s)	780
BstBI	TTCGAA	1 cut(s)	601
BstC8I	GCNNGC	3 cut(s)	87, 141, 2188
BstDEI	CTNAG	3 cut(s)	131, 172, 1400
BstDSI	CCRYGG	3 cut(s)	48, 1300, 1824
BstEII	GGTNACC	1 cut(s)	1735
BstF5I	GGATG	3 cut(s)	1112, 1571, 1754
BstFNI	CGCG	2 cut(s)	28, 30
BstHHI	GCGC	1 cut(s)	30
BstMAI	GTCTC	2 cut(s)	1528, 2021
BstMWI	GCNNNNNNNGC	7 cut(s)	802, 1276, 1931, 2097, 2106, 2174, 2183
BstNI	CCWGG	2 cut(s)	82, 747
BstNSI	RCATGY	4 cut(s)	143, 436, 816, 1917
BstPI	GGTNACC	1 cut(s)	1735
BstSCI	CCNGG	2 cut(s)	80, 745
BstSFI	CTRYAG	4 cut(s)	226, 1035, 1926, 2205
BstSNI	TACGTA	1 cut(s)	780
BstUI	CGCG	2 cut(s)	28, 30
BstV1I	GCAGC	3 cut(s)	130, 1912, 2161
BstV2I	GAAGAC	3 cut(s)	248, 590, 1371
BstX2I	RGATCY	3 cut(s)	714, 1820, 2149
BstYI	RGATCY	3 cut(s)	714, 1820, 2149
BsuRI	GGCC	1 cut(s)	750
BtgI	CCRYGG	3 cut(s)	48, 1300, 1824
BtgZI	GCGATG	1 cut(s)	726
BtrI	CACGTC	1 cut(s)	1999
BtsCI	GGATG	3 cut(s)	1112, 1571, 1754
BtsIMutI	CAGTG	1 cut(s)	1522
BveI	ACCTGC	3 cut(s)	796, 1919, 2212
Cac8I	GCNNGC	3 cut(s)	87, 141, 2188
CaiI	CAGNNNCTG	3 cut(s)	1925, 1934, 2204
CciI	TCATGA	2 cut(s)	324, 1336
CfoI	GCGC	1 cut(s)	30
Cfr13I	GGNCC	4 cut(s)	77, 735, 1011, 2201
CseI	GACGC	1 cut(s)	697
Csp6I	GTAC	5 cut(s)	45, 66, 781, 1114, 1814
CviQI	GTAC	5 cut(s)	45, 66, 781, 1114, 1814
DdeI	CTNAG	3 cut(s)	131, 172, 1400
DraI	TTTAAA	3 cut(s)	252, 592, 894
DriI	GACNNNNNGTC	1 cut(s)	1733
Eam1104I	CTCTTC	3 cut(s)	6, 13, 2110
Eam1105I	GACNNNNNGTC	1 cut(s)	1733
EarI	CTCTTC	3 cut(s)	6, 13, 2110
Eco105I	TACGTA	1 cut(s)	780
Eco130I	CCWWGG	2 cut(s)	1824, 2145
Eco24I	GRGCYC	1 cut(s)	2060
Eco31I	GGTCTC	1 cut(s)	1528
Eco32I	GATATC	1 cut(s)	1709
Eco47I	GGWCC	4 cut(s)	77, 735, 1011, 2201
Eco57I	CTGAAG	1 cut(s)	1925
Eco88I	CYCGRG	2 cut(s)	1761, 2053
Eco91I	GGTNACC	1 cut(s)	1735
EcoO109I	RGGNCCY	2 cut(s)	1011, 2201
EcoO65I	GGTNACC	1 cut(s)	1735
EcoRII	CCWGG	2 cut(s)	80, 745
EcoRV	GATATC	1 cut(s)	1709
EcoT14I	CCWWGG	2 cut(s)	1824, 2145
EcoT22I	ATGCAT	1 cut(s)	1476
EcoT38I	GRGCYC	1 cut(s)	2060
ErhI	CCWWGG	2 cut(s)	1824, 2145
FaqI	GGGAC	1 cut(s)	63
FbaI	TGATCA	4 cut(s)	837, 1339, 1495, 1549
Fnu4HI	GCNGC	4 cut(s)	144, 1926, 2175, 2178
FokI	GGATG	3 cut(s)	1119, 1558, 1741
FriOI	GRGCYC	1 cut(s)	2060
Fsp4HI	GCNGC	4 cut(s)	144, 1926, 2175, 2178
FspBI	CTAG	2 cut(s)	86, 1598
GlaI	GCGC	1 cut(s)	29
GluI	GCNGC	4 cut(s)	144, 1926, 2175, 2178
GsaI	CCCAGC	1 cut(s)	1064
HaeIII	GGCC	1 cut(s)	750
HapII	CCGG	2 cut(s)	1568, 2024
HgaI	GACGC	1 cut(s)	697
HhaI	GCGC	1 cut(s)	30
Hin1I	GRCGYC	1 cut(s)	786
Hin6I	GCGC	1 cut(s)	28
HinP1I	GCGC	1 cut(s)	28
HincII	GTYRAC	1 cut(s)	2142
HindII	GTYRAC	1 cut(s)	2142
HinfI	GANTC	8 cut(s)	23, 244, 557, 943, 1070, 1404, 1610, 1889
HpaI	GTTAAC	1 cut(s)	2142
HpaII	CCGG	2 cut(s)	1568, 2024
HphI	GGTGA	3 cut(s)	516, 1729, 1861
Hpy166II	GTNNAC	2 cut(s)	644, 2142
Hpy188I	TCNGA	4 cut(s)	132, 824, 1213, 1944
Hpy188III	TCNNGA	7 cut(s)	325, 712, 835, 947, 1337, 1361, 2069
Hpy8I	GTNNAC	2 cut(s)	644, 2142
Hpy99I	CGWCG	1 cut(s)	788
HpyAV	CCTTC	8 cut(s)	1066, 1726, 1761, 1792, 1804, 1849, 1853, 1980
HpyCH4III	ACNGT	8 cut(s)	49, 312, 547, 1118, 1491, 1517, 1593, 2032
HpyCH4IV	ACGT	9 cut(s)	320, 640, 674, 779, 786, 800, 827, 1375, 1998
HpyCH4V	TGCA	9 cut(s)	146, 805, 1037, 1394, 1474, 1913, 1928, 2186, 2207
HpyF10VI	GCNNNNNNNGC	7 cut(s)	802, 1276, 1931, 2097, 2106, 2174, 2183
HpyF3I	CTNAG	3 cut(s)	131, 172, 1400
HpySE526I	ACGT	9 cut(s)	320, 640, 674, 779, 786, 800, 827, 1375, 1998
Hsp92I	GRCGYC	1 cut(s)	786
HspAI	GCGC	1 cut(s)	28
KpnI	GGTACC	1 cut(s)	48
Ksp22I	TGATCA	4 cut(s)	837, 1339, 1495, 1549
KspAI	GTTAAC	1 cut(s)	2142
LmnI	GCTCC	2 cut(s)	1792, 2078
Lsp1109I	GCAGC	3 cut(s)	130, 1912, 2161
LweI	GCATC	6 cut(s)	415, 572, 1097, 1421, 1580, 1784
MaeI	CTAG	2 cut(s)	86, 1598
MaeII	ACGT	9 cut(s)	320, 640, 674, 779, 786, 800, 827, 1375, 1998
MaeIII	GTNAC	6 cut(s)	541, 808, 828, 1735, 1849, 2032
MfeI	CAATTG	1 cut(s)	910
MflI	RGATCY	3 cut(s)	714, 1820, 2149
MhlI	GDGCHC	2 cut(s)	1869, 2060
MlyI	GAGTC	3 cut(s)	32, 238, 1604
MmeI	TCCRAC	2 cut(s)	883, 1504
Mph1103I	ATGCAT	1 cut(s)	1476
MslI	CAYNNNNRTG	1 cut(s)	1952
MspCI	CTTAAG	1 cut(s)	487
MspI	CCGG	2 cut(s)	1568, 2024
MspR9I	CCNGG	2 cut(s)	82, 747
MunI	CAATTG	1 cut(s)	910
Mva1269I	GAATGC	1 cut(s)	1396
MvaI	CCWGG	2 cut(s)	82, 747
MvnI	CGCG	2 cut(s)	28, 30
MwoI	GCNNNNNNNGC	7 cut(s)	802, 1276, 1931, 2097, 2106, 2174, 2183
NcoI	CCATGG	1 cut(s)	1824
NheI	GCTAGC	1 cut(s)	85
NlaIV	GGNNCC	4 cut(s)	46, 79, 737, 2151
NmuCI	GTSAC	3 cut(s)	828, 1735, 1849
NsiI	ATGCAT	1 cut(s)	1476
NspI	RCATGY	4 cut(s)	143, 436, 816, 1917
NspV	TTCGAA	1 cut(s)	601
PaeI	GCATGC	1 cut(s)	143
PaeR7I	CTCGAG	1 cut(s)	1761
PagI	TCATGA	2 cut(s)	324, 1336
PaqCI	CACCTGC	1 cut(s)	1919
PciI	ACATGT	2 cut(s)	432, 812
PctI	GAATGC	1 cut(s)	1396
PfeI	GAWTC	5 cut(s)	557, 943, 1070, 1404, 1889
Pfl23II	CGTACG	1 cut(s)	780
PflMI	CCANNNNNTGG	1 cut(s)	533
PkrI	GCNGC	4 cut(s)	145, 1927, 2176, 2179
PleI	GAGTC	3 cut(s)	31, 238, 1604
PpsI	GAGTC	3 cut(s)	31, 238, 1604
Ppu21I	YACGTR	1 cut(s)	780
PpuMI	RGGWCCY	2 cut(s)	1011, 2201
PscI	ACATGT	2 cut(s)	432, 812
PshBI	ATTAAT	3 cut(s)	257, 1884, 2004
PsiI	TTATAA	1 cut(s)	699
Psp1406I	AACGTT	1 cut(s)	1375
Psp5II	RGGWCCY	2 cut(s)	1011, 2201
Psp6I	CCWGG	2 cut(s)	80, 745
PspEI	GGTNACC	1 cut(s)	1735
PspFI	CCCAGC	1 cut(s)	1060
PspGI	CCWGG	2 cut(s)	80, 745
PspLI	CGTACG	1 cut(s)	780
PspN4I	GGNNCC	4 cut(s)	46, 79, 737, 2151
PspPI	GGNCC	4 cut(s)	77, 735, 1011, 2201
PspPPI	RGGWCCY	2 cut(s)	1011, 2201
PspXI	VCTCGAGB	1 cut(s)	1761
PstI	CTGCAG	3 cut(s)	1039, 1930, 2209
PstNI	CAGNNNCTG	3 cut(s)	1925, 1934, 2204
PsuI	RGATCY	3 cut(s)	714, 1820, 2149
RsaI	GTAC	5 cut(s)	46, 67, 782, 1115, 1815
RsaNI	GTAC	5 cut(s)	45, 66, 781, 1114, 1814
RseI	CAYNNNNRTG	1 cut(s)	1952
SatI	GCNGC	4 cut(s)	144, 1926, 2175, 2178
Sau96I	GGNCC	4 cut(s)	77, 735, 1011, 2201
SchI	GAGTC	3 cut(s)	32, 238, 1604
ScrFI	CCNGG	2 cut(s)	82, 747
SduI	GDGCHC	2 cut(s)	1869, 2060
SfaNI	GCATC	6 cut(s)	415, 572, 1097, 1421, 1580, 1784
SfcI	CTRYAG	4 cut(s)	226, 1035, 1926, 2205
Sfr274I	CTCGAG	1 cut(s)	1761
SfuI	TTCGAA	1 cut(s)	601
SinI	GGWCC	4 cut(s)	77, 735, 1011, 2201
SlaI	CTCGAG	1 cut(s)	1761
SmiI	ATTTAAAT	1 cut(s)	894
SmiMI	CAYNNNNRTG	1 cut(s)	1952
SmlI	CTYRAG	3 cut(s)	487, 1442, 1761
SmoI	CTYRAG	3 cut(s)	487, 1442, 1761
SnaBI	TACGTA	1 cut(s)	780
SphI	GCATGC	1 cut(s)	143
SsiI	CCGC	2 cut(s)	30, 2177
SspI	AATATT	3 cut(s)	181, 882, 1659
SspMI	CTAG	2 cut(s)	86, 1598
StyD4I	CCNGG	2 cut(s)	80, 745
StyI	CCWWGG	2 cut(s)	1824, 2145
SwaI	ATTTAAAT	1 cut(s)	894
TaaI	ACNGT	8 cut(s)	49, 312, 547, 1118, 1491, 1517, 1593, 2032
TaiI	ACGT	9 cut(s)	323, 643, 677, 782, 789, 803, 830, 1378, 2001
TaqI	TCGA	7 cut(s)	601, 720, 1762, 1792, 1983, 2060, 2192
TaqII	GACCGA	1 cut(s)	1552
TauI	GCSGC	1 cut(s)	2180
TfiI	GAWTC	5 cut(s)	557, 943, 1070, 1404, 1889
TscAI	CASTG	1 cut(s)	1522
TseFI	GTSAC	3 cut(s)	828, 1735, 1849
TseI	GCWGC	3 cut(s)	143, 1925, 2174
Tsp45I	GTSAC	3 cut(s)	828, 1735, 1849
TspGWI	ACGGA	3 cut(s)	881, 950, 1317
TspRI	CASTG	1 cut(s)	1522
Van91I	CCANNNNNTGG	1 cut(s)	533
Vha464I	CTTAAG	1 cut(s)	487
VpaK11BI	GGWCC	4 cut(s)	77, 735, 1011, 2201
VspI	ATTAAT	3 cut(s)	257, 1884, 2004
XapI	RAATTY	4 cut(s)	499, 530, 895, 918
XceI	RCATGY	4 cut(s)	143, 436, 816, 1917
XhoI	CTCGAG	1 cut(s)	1761
XspI	CTAG	2 cut(s)	86, 1598
ZraI	GACGTC	1 cut(s)	787
Zsp2I	ATGCAT	1 cut(s)	1476

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.