pycom15g03750

Chorismate mutase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
2284003 .. 2286682
2680 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g03750.3

Sequence Viewer

Length: 1365 bp
ATGACTAGTATATGGGCACACACAAAGTGTGTGAGAAAATTTATTACTTTTGTTTTTGAAGTAGAAGGAGAGAGGAAGAGAGTGATAGAGAATGTAAAGCTTGAAAAAAAAAACAAAATTTGGTTATGTGAAATTACATTTTTGCCCCATATTTCTTATTCATGTTCTGTTTTAATTAGAGGATTAAACTGTAATAGAGATAAGAATTCTTTTTATTTTGTTATAATTGAATATCCGACTTCTTTCGGTGAACCCGCGTGTGACCCTTGCAGCTGGGCCCCACTAACCGTGAAAGCCGCTGTGCAATCACGTCGCGACACGTTATGGCTAGATTCCCACGCTGAGCAATCACGTCACCGCGTGTACGCAAGTGGTCCCCCACCCCCTCCCGCTCTGTTTTTCCGTCCGCTTAAAAAACCCACCACGACCACCTCCTCCCTCTCATTCCCACTAAGCAAAGATTCCAAATTTTCCTTACTTTCCTTACTTTCCGCTCTTTCTAACTTTCTGTTTGTTTCCCGAGAAAAAAAAAGTGCGCTGTCCACAGTTTCCCTACATTTTATGCACATTGAAATGGCCGCTGAATCGAACTCCAAGAGTGATATTTTGACGCTTGAGCAAGTGAGAGAGGCGTTGATTAAACAAGAAGACACCATAATTTCCCGGCTGATTCAGAGAGCAAACTTCCCTTTGAATTCTCCGGCGTACGACGAGGGAAAGTTTCCATCTTTTCCTGGTTCTCTCCTTCAATTCGTTGTCAAGGAGACAGAAGCCCTCCAATCCAAGGTTGGTCGGTATGAAAGTCCAGAAGAACATCCGTTTTTCCCGGAAAGTTTACCCCCTTCGTTGCTGCCCCTTCCGGCAAATCCACCGGTATTGCATCCTGCTGCAGGTTCGATTAACATAAACGAAAAGATTTGGGAGTTCTATTTCGACGAATTGCTTCCTCTGTTTGCTGCCCCCGGCGACGATGGAAGCTATGCATCAACTGCTTCTAGTGATCTTGATTGCTTACAGGCCATCTCTAGCCGAATTCATTACGGATACTATGTAGCCGAGGTTAAATTCAAGGGTTCCCCTCAAGACTACGAACCAGCGATTCGCGATCAGGATAGGGACGGTCTGATGAAATTGTTGACATTTGTGGATGTGGAAGAGATGGTGAAGAAACGAGTTGAGAAGAAGGCAAAGGTGTTGGGGCAAGAAGTAAGTGTAGTTGACAATGCCAACGCTAAAACCGACAAACACAACGCAAGTGAAAAATACAAGGTTGATCCGTCGGTAGTTTCTCGCCTCTACGAAGAATGGATAATGCCGCTCACGAAGCTTGTTCAAGTCGAGTATCTCCTTCGCCGGCTAGACTAG

Protein Analysis

455

Amino Acids

51.48

Weight (kDa)

6.81

Isoelectric Point (pI)

58.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 224
Acc36I ACCTGC 1 cut(s) 881
AccBSI CCGCTC 3 cut(s) 392, 494, 1318
AccII CGCG 4 cut(s) 257, 315, 360, 1104
AciI CCGC 8 cut(s) 255, 297, 358, 390, 407, 492, 579, 1316
AclWI GGATC 1 cut(s) 1268
AcoI YGGCCR 1 cut(s) 576
AcsI RAATTY 7 cut(s) 38, 117, 205, 467, 694, 1032, 1064
AdeI CACNNNGTG 2 cut(s) 27, 361
AfaI GTAC 2 cut(s) 365, 707
AfiI CCNNNNNNNGG 2 cut(s) 784, 890
AflIII ACRYGT 1 cut(s) 318
AgeI ACCGGT 1 cut(s) 871
AgsI TTSAA 8 cut(s) 59, 104, 230, 572, 694, 749, 1069, 1334
AhlI ACTAGT 1 cut(s) 5
AjiI CACGTC 2 cut(s) 311, 353
AjnI CCWGG 1 cut(s) 733
AluBI AGCT 4 cut(s) 100, 273, 978, 1327
AluI AGCT 4 cut(s) 100, 273, 978, 1327
Alw26I GTCTC 1 cut(s) 758
AlwI GGATC 1 cut(s) 1268
Ama87I CYCGRG 1 cut(s) 519
AoxI GGCC 3 cut(s) 276, 576, 1017
ApaI GGGCCC 1 cut(s) 280
ApeKI GCWGC 4 cut(s) 270, 850, 887, 956
ApoI RAATTY 7 cut(s) 38, 117, 205, 467, 694, 1032, 1064
AsiGI ACCGGT 1 cut(s) 871
Asp700I GAANNNNTTC 1 cut(s) 942
AspLEI GCGC 1 cut(s) 538
AspS9I GGNCC 3 cut(s) 276, 277, 374
AsuC2I CCSGG 3 cut(s) 664, 827, 963
AsuHPI GGTGA 3 cut(s) 260, 347, 1174
AvaI CYCGRG 1 cut(s) 519
AvaII GGWCC 1 cut(s) 374
BaeGI GKGCMC 2 cut(s) 19, 280
BanII GRGCYC 1 cut(s) 280
BbsI GAAGAC 1 cut(s) 654
BbvI GCAGC 4 cut(s) 282, 837, 874, 943
BccI CCATC 4 cut(s) 733, 965, 1028, 1153
BcgI CGANNNNNNTGC 2 cut(s) 293, 327
BciT130I CCWGG 1 cut(s) 735
BciVI GTATCC 1 cut(s) 1037
BcnI CCSGG 3 cut(s) 664, 827, 963
BcoDI GTCTC 1 cut(s) 758
BcuI ACTAGT 1 cut(s) 5
BfaI CTAG 6 cut(s) 6, 329, 996, 1026, 1358, 1363
BfmI CTRYAG 1 cut(s) 888
BfuAI ACCTGC 1 cut(s) 881
BfuI GTATCC 1 cut(s) 1037
BisI GCNGC 7 cut(s) 271, 297, 579, 851, 888, 957, 1316
BlpI GCTNAGC 1 cut(s) 342
BlsI GCNGC 7 cut(s) 272, 298, 580, 852, 889, 958, 1317
Bme1390I CCNGG 4 cut(s) 664, 735, 827, 963
Bme18I GGWCC 1 cut(s) 374
BmeT110I CYCGRG 1 cut(s) 519
BmgBI CACGTC 2 cut(s) 311, 353
BmgT120I GGNCC 3 cut(s) 276, 277, 374
BmiI GGNNCC 4 cut(s) 278, 279, 376, 1075
BmrFI CCNGG 4 cut(s) 664, 735, 827, 963
BmsI GCATC 2 cut(s) 889, 992
BpiI GAAGAC 1 cut(s) 654
Bpu1102I GCTNAGC 1 cut(s) 342
BpuEI CTTGAG 2 cut(s) 635, 1065
BpuMI CCSGG 3 cut(s) 664, 827, 963
BsaJI CCNNGG 3 cut(s) 783, 961, 1056
BsaWI WCCGGW 1 cut(s) 871
Bsc4I CCNNNNNNNGG 2 cut(s) 784, 890
Bse118I RCCGGY 2 cut(s) 871, 1353
BseBI CCWGG 1 cut(s) 735
BseDI CCNNGG 3 cut(s) 783, 961, 1056
BseGI GGATG 3 cut(s) 814, 880, 1153
BseLI CCNNNNNNNGG 2 cut(s) 784, 890
BseMII CTCAG 1 cut(s) 333
BseRI GAGGAG 1 cut(s) 424
BseSI GKGCMC 2 cut(s) 19, 280
BseXI GCAGC 4 cut(s) 282, 837, 874, 943
BseYI CCCAGC 1 cut(s) 273
Bsh1236I CGCG 4 cut(s) 257, 315, 360, 1104
BshFI GGCC 3 cut(s) 278, 578, 1019
BshTI ACCGGT 1 cut(s) 871
BsiHKCI CYCGRG 1 cut(s) 519
BsiSI CCGG 7 cut(s) 664, 701, 827, 860, 872, 963, 1354
BsiWI CGTACG 1 cut(s) 705
BslFI GGGAC 2 cut(s) 360, 1130
BslI CCNNNNNNNGG 2 cut(s) 784, 890
BsmAI GTCTC 1 cut(s) 758
BsmFI GGGAC 2 cut(s) 360, 1130
BsnI GGCC 3 cut(s) 278, 578, 1019
BsoBI CYCGRG 1 cut(s) 519
Bsp120I GGGCCC 1 cut(s) 276
Bsp1286I GDGCHC 2 cut(s) 19, 280
Bsp143I GATC 3 cut(s) 1000, 1105, 1273
Bsp1720I GCTNAGC 1 cut(s) 342
Bsp68I TCGCGA 2 cut(s) 315, 1104
BspACI CCGC 8 cut(s) 255, 297, 358, 390, 407, 492, 579, 1316
BspANI GGCC 3 cut(s) 278, 578, 1019
BspCNI CTCAG 1 cut(s) 334
BspFNI CGCG 4 cut(s) 257, 315, 360, 1104
BspLI GGNNCC 4 cut(s) 278, 279, 376, 1075
BspMAI CTGCAG 1 cut(s) 892
BspMI ACCTGC 1 cut(s) 881
BspPI GGATC 1 cut(s) 1268
BsrBI CCGCTC 3 cut(s) 392, 494, 1318
BsrFI RCCGGY 2 cut(s) 871, 1353
BssAI RCCGGY 2 cut(s) 871, 1353
BssECI CCNNGG 3 cut(s) 783, 961, 1056
BssMI GATC 3 cut(s) 1000, 1105, 1273
BssT1I CCWWGG 1 cut(s) 783
Bst2UI CCWGG 1 cut(s) 735
Bst4CI ACNGT 4 cut(s) 191, 289, 547, 1121
Bst6I CTCTTC 2 cut(s) 71, 1149
BstAPI GCANNNNNTGC 1 cut(s) 989
BstC8I GCNNGC 1 cut(s) 1355
BstDEI CTNAG 2 cut(s) 342, 452
BstENI CCTNNNNNAGG 1 cut(s) 888
BstF5I GGATG 3 cut(s) 814, 880, 1153
BstFNI CGCG 4 cut(s) 257, 315, 360, 1104
BstHHI GCGC 1 cut(s) 538
BstKTI GATC 3 cut(s) 1003, 1108, 1276
BstMAI GTCTC 1 cut(s) 758
BstMBI GATC 3 cut(s) 1000, 1105, 1273
BstMWI GCNNNNNNNGC 2 cut(s) 989, 1324
BstNI CCWGG 1 cut(s) 735
BstSCI CCNGG 4 cut(s) 662, 733, 825, 961
BstSFI CTRYAG 1 cut(s) 888
BstSLI GKGCMC 2 cut(s) 19, 280
BstUI CGCG 4 cut(s) 257, 315, 360, 1104
BstV1I GCAGC 4 cut(s) 282, 837, 874, 943
BstV2I GAAGAC 1 cut(s) 654
BsuI GTATCC 1 cut(s) 1037
BsuRI GGCC 3 cut(s) 278, 578, 1019
BtrI CACGTC 2 cut(s) 311, 353
BtsCI GGATG 3 cut(s) 814, 880, 1153
BtuMI TCGCGA 2 cut(s) 315, 1104
BveI ACCTGC 1 cut(s) 881
Cac8I GCNNGC 1 cut(s) 1355
CfoI GCGC 1 cut(s) 538
Cfr10I RCCGGY 2 cut(s) 871, 1353
Cfr13I GGNCC 3 cut(s) 276, 277, 374
CseI GACGC 1 cut(s) 619
Csp6I GTAC 2 cut(s) 364, 706
CspAI ACCGGT 1 cut(s) 871
CspCI CAANNNNNGTGG 2 cut(s) 858, 893
CviAII CATG 1 cut(s) 162
CviQI GTAC 2 cut(s) 364, 706
DdeI CTNAG 2 cut(s) 342, 452
DpnI GATC 3 cut(s) 1002, 1107, 1275
DpnII GATC 3 cut(s) 1000, 1105, 1273
DraIII CACNNNGTG 2 cut(s) 27, 361
EaeI YGGCCR 1 cut(s) 576
Eam1104I CTCTTC 2 cut(s) 71, 1149
EarI CTCTTC 2 cut(s) 71, 1149
Eco130I CCWWGG 1 cut(s) 783
Eco24I GRGCYC 1 cut(s) 280
Eco47I GGWCC 1 cut(s) 374
Eco88I CYCGRG 1 cut(s) 519
EcoNI CCTNNNNNAGG 1 cut(s) 888
EcoO109I RGGNCCY 1 cut(s) 277
EcoRI GAATTC 3 cut(s) 205, 694, 1032
EcoRII CCWGG 1 cut(s) 733
EcoT14I CCWWGG 1 cut(s) 783
EcoT22I ATGCAT 1 cut(s) 985
EcoT38I GRGCYC 1 cut(s) 280
ErhI CCWWGG 1 cut(s) 783
FaeI CATG 1 cut(s) 165
FaqI GGGAC 2 cut(s) 360, 1130
FatI CATG 1 cut(s) 161
FauI CCCGC 2 cut(s) 262, 397
Fnu4HI GCNGC 7 cut(s) 271, 297, 579, 851, 888, 957, 1316
FokI GGATG 3 cut(s) 801, 867, 1160
FriOI GRGCYC 1 cut(s) 280
Fsp4HI GCNGC 7 cut(s) 271, 297, 579, 851, 888, 957, 1316
FspBI CTAG 6 cut(s) 6, 329, 996, 1026, 1358, 1363
GlaI GCGC 1 cut(s) 537
GluI GCNGC 7 cut(s) 271, 297, 579, 851, 888, 957, 1316
GsaI CCCAGC 1 cut(s) 277
HaeIII GGCC 3 cut(s) 278, 578, 1019
HapII CCGG 7 cut(s) 664, 701, 827, 860, 872, 963, 1354
HgaI GACGC 1 cut(s) 619
HhaI GCGC 1 cut(s) 538
Hin1II CATG 1 cut(s) 165
Hin6I GCGC 1 cut(s) 536
HinP1I GCGC 1 cut(s) 536
HincII GTYRAC 2 cut(s) 1137, 1219
HindII GTYRAC 2 cut(s) 1137, 1219
HindIII AAGCTT 2 cut(s) 98, 1325
HinfI GANTC 5 cut(s) 332, 461, 584, 670, 1099
HpaII CCGG 7 cut(s) 664, 701, 827, 860, 872, 963, 1354
HphI GGTGA 3 cut(s) 260, 347, 1174
Hpy166II GTNNAC 6 cut(s) 251, 364, 543, 836, 1137, 1219
Hpy188I TCNGA 3 cut(s) 237, 675, 1125
Hpy188III TCNNGA 8 cut(s) 314, 519, 806, 1004, 1082, 1103, 1109, 1321
Hpy8I GTNNAC 6 cut(s) 251, 364, 543, 836, 1137, 1219
Hpy99I CGWCG 5 cut(s) 315, 713, 938, 971, 1282
HpyAV CCTTC 6 cut(s) 59, 755, 852, 866, 1177, 1358
HpyCH4III ACNGT 4 cut(s) 191, 289, 547, 1121
HpyCH4IV ACGT 3 cut(s) 310, 320, 352
HpyCH4V TGCA 6 cut(s) 270, 304, 565, 880, 890, 983
HpyF10VI GCNNNNNNNGC 2 cut(s) 989, 1324
HpyF3I CTNAG 2 cut(s) 342, 452
HpySE526I ACGT 3 cut(s) 310, 320, 352
Hsp92II CATG 1 cut(s) 165
HspAI GCGC 1 cut(s) 536
KroI GCCGGC 1 cut(s) 1353
KroNI GCCGGC 1 cut(s) 1355
Kzo9I GATC 3 cut(s) 1000, 1105, 1273
Lsp1109I GCAGC 4 cut(s) 282, 837, 874, 943
LweI GCATC 2 cut(s) 889, 992
MaeI CTAG 6 cut(s) 6, 329, 996, 1026, 1358, 1363
MaeII ACGT 3 cut(s) 310, 320, 352
MaeIII GTNAC 2 cut(s) 260, 353
MalI GATC 3 cut(s) 1002, 1107, 1275
MbiI CCGCTC 3 cut(s) 392, 494, 1318
MboI GATC 3 cut(s) 1000, 1105, 1273
MboII GAAGA 7 cut(s) 88, 659, 821, 1166, 1177, 1192, 1313
MhlI GDGCHC 2 cut(s) 19, 280
MmeI TCCRAC 1 cut(s) 260
Mph1103I ATGCAT 1 cut(s) 985
MroNI GCCGGC 1 cut(s) 1353
MroXI GAANNNNTTC 1 cut(s) 942
MseI TTAA 6 cut(s) 173, 185, 411, 639, 900, 1062
MslI CAYNNNNRTG 1 cut(s) 572
MspA1I CMGCKG 3 cut(s) 273, 299, 581
MspI CCGG 7 cut(s) 664, 701, 827, 860, 872, 963, 1354
MspR9I CCNGG 4 cut(s) 664, 735, 827, 963
MvaI CCWGG 1 cut(s) 735
MvnI CGCG 4 cut(s) 257, 315, 360, 1104
MwoI GCNNNNNNNGC 2 cut(s) 989, 1324
NaeI GCCGGC 1 cut(s) 1355
NciI CCSGG 3 cut(s) 664, 827, 963
NdeII GATC 3 cut(s) 1000, 1105, 1273
NgoMIV GCCGGC 1 cut(s) 1353
NlaIII CATG 1 cut(s) 165
NlaIV GGNNCC 4 cut(s) 278, 279, 376, 1075
NmeAIII GCCGAG 1 cut(s) 1081
NmuCI GTSAC 2 cut(s) 260, 353
NruI TCGCGA 2 cut(s) 315, 1104
NsiI ATGCAT 1 cut(s) 985
PcsI WCGNNNNNNNCGW 1 cut(s) 1236
PdiI GCCGGC 1 cut(s) 1355
PdmI GAANNNNTTC 1 cut(s) 942
PfeI GAWTC 5 cut(s) 332, 461, 584, 670, 1099
Pfl23II CGTACG 1 cut(s) 705
PfoI TCCNGGA 1 cut(s) 825
PinAI ACCGGT 1 cut(s) 871
PkrI GCNGC 7 cut(s) 272, 298, 580, 852, 889, 958, 1317
PsiI TTATAA 1 cut(s) 224
Psp6I CCWGG 1 cut(s) 733
PspFI CCCAGC 1 cut(s) 273
PspGI CCWGG 1 cut(s) 733
PspLI CGTACG 1 cut(s) 705
PspN4I GGNNCC 4 cut(s) 278, 279, 376, 1075
PspOMI GGGCCC 1 cut(s) 276
PspPI GGNCC 3 cut(s) 276, 277, 374
PstI CTGCAG 1 cut(s) 892
PvuII CAGCTG 1 cut(s) 273
RruI TCGCGA 2 cut(s) 315, 1104
RsaI GTAC 2 cut(s) 365, 707
RsaNI GTAC 2 cut(s) 364, 706
RseI CAYNNNNRTG 1 cut(s) 572
SaqAI TTAA 6 cut(s) 173, 185, 411, 639, 900, 1062
SatI GCNGC 7 cut(s) 271, 297, 579, 851, 888, 957, 1316
Sau3AI GATC 3 cut(s) 1000, 1105, 1273
Sau96I GGNCC 3 cut(s) 276, 277, 374
ScrFI CCNGG 4 cut(s) 664, 735, 827, 963
SduI GDGCHC 2 cut(s) 19, 280
SfaNI GCATC 2 cut(s) 889, 992
SfcI CTRYAG 1 cut(s) 888
SinI GGWCC 1 cut(s) 374
SmiMI CAYNNNNRTG 1 cut(s) 572
SmlI CTYRAG 2 cut(s) 614, 1080
SmoI CTYRAG 2 cut(s) 614, 1080
SpeI ACTAGT 1 cut(s) 5
SsiI CCGC 8 cut(s) 255, 297, 358, 390, 407, 492, 579, 1316
SspMI CTAG 6 cut(s) 6, 329, 996, 1026, 1358, 1363
StyD4I CCNGG 4 cut(s) 662, 733, 825, 961
StyI CCWWGG 1 cut(s) 783
TaaI ACNGT 4 cut(s) 191, 289, 547, 1121
TaiI ACGT 3 cut(s) 313, 323, 355
TaqI TCGA 4 cut(s) 587, 896, 933, 1338
TauI GCSGC 3 cut(s) 299, 581, 1318
TfiI GAWTC 5 cut(s) 332, 461, 584, 670, 1099
Tru1I TTAA 6 cut(s) 173, 185, 411, 639, 900, 1062
Tru9I TTAA 6 cut(s) 173, 185, 411, 639, 900, 1062
TseFI GTSAC 2 cut(s) 260, 353
TseI GCWGC 4 cut(s) 270, 850, 887, 956
Tsp45I GTSAC 2 cut(s) 260, 353
TspDTI ATGAA 4 cut(s) 150, 813, 1025, 1142
TspGWI ACGGA 4 cut(s) 392, 807, 1056, 1266
VpaK11BI GGWCC 1 cut(s) 374
XagI CCTNNNNNAGG 1 cut(s) 888
XapI RAATTY 7 cut(s) 38, 117, 205, 467, 694, 1032, 1064
XcmI CCANNNNNNNNNTGG 1 cut(s) 785
XmnI GAANNNNTTC 1 cut(s) 942
XspI CTAG 6 cut(s) 6, 329, 996, 1026, 1358, 1363
Zsp2I ATGCAT 1 cut(s) 985
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.