transcription, DNA-templated
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G49330 |
| pyrus_communis | pycom15g04920 |
| rosa_chinensis | RchiOBHm_Chr3g0473591 |
| rosa_laevigata | RLG00000024002 |
| rosa_multiflora | Rmu_ssc0000322.1_g000028 |
| rosa_roxburghii | Rroxscaffold_2G00130480 Rroxscaffold_3G00255700 Rroxscaffold_6G00408040 Rroxscaffold_7G00194780 |
| rosa_samantha | Rh1DG328800 Rh2AG274100 Rh6AG192700 Rh7DG192700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 69 |
| AjnI | CCWGG | 1 cut(s) | 47 |
| AluBI | AGCT | 2 cut(s) | 80, 131 |
| AluI | AGCT | 2 cut(s) | 80, 131 |
| Alw26I | GTCTC | 1 cut(s) | 178 |
| ApoI | RAATTY | 1 cut(s) | 69 |
| BccI | CCATC | 2 cut(s) | 162, 209 |
| BciT130I | CCWGG | 1 cut(s) | 49 |
| BcoDI | GTCTC | 1 cut(s) | 178 |
| Bme1390I | CCNGG | 1 cut(s) | 49 |
| BmiI | GGNNCC | 1 cut(s) | 46 |
| BmrFI | CCNGG | 1 cut(s) | 49 |
| BsaI | GGTCTC | 1 cut(s) | 178 |
| BsaJI | CCNNGG | 3 cut(s) | 24, 57, 94 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 31 |
| BseBI | CCWGG | 1 cut(s) | 49 |
| BseDI | CCNNGG | 3 cut(s) | 24, 57, 94 |
| BseMII | CTCAG | 2 cut(s) | 155, 173 |
| BseRI | GAGGAG | 2 cut(s) | 22, 57 |
| BsmAI | GTCTC | 1 cut(s) | 178 |
| Bso31I | GGTCTC | 1 cut(s) | 178 |
| Bsp19I | CCATGG | 1 cut(s) | 94 |
| BspCNI | CTCAG | 2 cut(s) | 156, 174 |
| BspLI | GGNNCC | 1 cut(s) | 46 |
| BspTNI | GGTCTC | 1 cut(s) | 178 |
| BssECI | CCNNGG | 3 cut(s) | 24, 57, 94 |
| BssT1I | CCWWGG | 3 cut(s) | 24, 57, 94 |
| Bst2UI | CCWGG | 1 cut(s) | 49 |
| BstDEI | CTNAG | 2 cut(s) | 164, 182 |
| BstDSI | CCRYGG | 1 cut(s) | 94 |
| BstMAI | GTCTC | 1 cut(s) | 178 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 53 |
| BstNI | CCWGG | 1 cut(s) | 49 |
| BstSCI | CCNGG | 1 cut(s) | 47 |
| BtgI | CCRYGG | 1 cut(s) | 94 |
| CviAII | CATG | 2 cut(s) | 15, 95 |
| CviJI | RGCY | 5 cut(s) | 47, 80, 92, 117, 131 |
| CviKI_1 | RGCY | 5 cut(s) | 47, 80, 92, 117, 131 |
| DdeI | CTNAG | 2 cut(s) | 164, 182 |
| Eco130I | CCWWGG | 3 cut(s) | 24, 57, 94 |
| Eco31I | GGTCTC | 1 cut(s) | 178 |
| EcoRII | CCWGG | 1 cut(s) | 47 |
| EcoT14I | CCWWGG | 3 cut(s) | 24, 57, 94 |
| ErhI | CCWWGG | 3 cut(s) | 24, 57, 94 |
| FaeI | CATG | 2 cut(s) | 18, 98 |
| FaiI | YATR | 3 cut(s) | 16, 96, 194 |
| FatI | CATG | 2 cut(s) | 14, 94 |
| Hin1II | CATG | 2 cut(s) | 18, 98 |
| HinfI | GANTC | 2 cut(s) | 10, 33 |
| Hpy188I | TCNGA | 2 cut(s) | 183, 214 |
| HpyAV | CCTTC | 3 cut(s) | 23, 95, 128 |
| HpyCH4V | TGCA | 1 cut(s) | 159 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 53 |
| HpyF3I | CTNAG | 2 cut(s) | 164, 182 |
| Hsp92II | CATG | 2 cut(s) | 18, 98 |
| LmnI | GCTCC | 2 cut(s) | 26, 44 |
| LpnPI | CCDG | 4 cut(s) | 34, 61, 117, 201 |
| MboII | GAAGA | 1 cut(s) | 74 |
| MluCI | AATT | 1 cut(s) | 69 |
| MlyI | GAGTC | 2 cut(s) | 19, 27 |
| MnlI | CCTC | 2 cut(s) | 35, 194 |
| MseI | TTAA | 2 cut(s) | 87, 173 |
| MspR9I | CCNGG | 1 cut(s) | 49 |
| MvaI | CCWGG | 1 cut(s) | 49 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 53 |
| NcoI | CCATGG | 1 cut(s) | 94 |
| NlaIII | CATG | 2 cut(s) | 18, 98 |
| NlaIV | GGNNCC | 1 cut(s) | 46 |
| PleI | GAGTC | 2 cut(s) | 18, 27 |
| PpsI | GAGTC | 2 cut(s) | 18, 27 |
| Psp6I | CCWGG | 1 cut(s) | 47 |
| PspGI | CCWGG | 1 cut(s) | 47 |
| PspN4I | GGNNCC | 1 cut(s) | 46 |
| SaqAI | TTAA | 2 cut(s) | 87, 173 |
| SchI | GAGTC | 2 cut(s) | 19, 27 |
| ScrFI | CCNGG | 1 cut(s) | 49 |
| SetI | ASST | 2 cut(s) | 82, 133 |
| SgeI | CNNG | 8 cut(s) | 27, 37, 60, 61, 70, 107, 144, 200 |
| Sse9I | AATT | 1 cut(s) | 69 |
| StyD4I | CCNGG | 1 cut(s) | 47 |
| StyI | CCWWGG | 3 cut(s) | 24, 57, 94 |
| TasI | AATT | 1 cut(s) | 69 |
| Tru1I | TTAA | 2 cut(s) | 87, 173 |
| Tru9I | TTAA | 2 cut(s) | 87, 173 |
| XapI | RAATTY | 1 cut(s) | 69 |