Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0003631

Physical Location & Seq

Genomic Coordinates Reverse (-)

3859738 .. 3861099

Gene Structure 1362 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g06330.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1362 bp

ATGTACCATCCATCTGGGTGGAAAAGAAGTTGTGGGGGGATGAAGTTTGATGCAGGCAGTGGTGGGCAGGTTCTAGATCTGGAAACCGCGGTGAAAGATGGGATTTTTGGCGGCGGAGGCGGGTTAATTTGCGGTGGCGGAGTCGGTGTTGTGGCGGAGAAGTTGGATCTGAAGAAGATGATTGAGGAGCTGGAGTCCATTGAGATTCCTTCAGTGTTCATCTGCCCGATTTCGTTGGAGCCAATGCAGGATCCGGTGACCCTTTGCACGGGTCAGACCTACGAGAGATCGAACATTCTCAGATGGTTCTCTTTGGGGCACTACACTTGCCCCACAACAATGCAGGAGCTTTGGGATGATTCAGTCACGCCAAATAACACCCTTCACCAGTTGATTTGCAGCTGGTTTTCGCAGAAGTACGTCGTGATGAAGAAGCGGTCAGAGGACGTGCAGGGGAGGGTTCTGGAGATTTTGGAGACATTGAAGAAGGTTAAGGGCCAAGCCAGAGTTCAAGGTCTCAAGGAGCTCAGAAGGGTAGTGGCAGCTCATGCTTCCGCACAGAACACAGTGGTGGACAACGGGGGTGTTGCTTTGATCTCCTCTCTGTTGGGTCCTTTCACTTCGCACGCCGTTGGGTCGGAAGCAATTGGGACTCTTGTGAATTTGGAGCTCAGTTCAGAGTCTAGGACGAGTCTGATGCAACCTGCAAAGGTTTCGTTGATGGTTGATATGTTGAACGAGGGATCGATTGAGACGACGATCAATTGCACGAAATTGATTGAGGTTTTGATGGAGGGCAAGGATTTGGAGGCGGAAAATGTCTCAAGCTTACGTCTTGTGGTTGGATTGTTGAGATTGGTCAAGGATAAAAGGAACCCTAATGGGGTTTTGCCTGGTCTCAGTTTGCTCAAGACAATTTGTTCCCACGAATCGGTCAGGAACTCGGTTGTGAGCGTTGGGGCAGTTCCTCAATTGATTGAGCTCTTGCCCGGTTTGAATCACGAGTGTTTGGAGATAGCCCTTCATGTCCTAGAAGTTTTGTCAACACTTCCCGAGGGAAGGCAGGCTTTGAAAGATTGTCCCAAAACAATCCCCAGTGTAGTTAGACTACTGATGAAGGTTTCAGAAAGCTGCACTCAGCTCGCATTATCGATCTTGTGGGCGGTCTGCAAGCTCGCGCCAGACGAATGCGCTTCGCTTGCGGTAGAGGCGGGTTTGGCAGCCAAGCTGCTGCTTGTAATTCAAAGTGGTTGCAATCCTGTATTGAAGCAAAGAGCTGCTGAGCTCTTGAAGTTGTGTAGTCTAAATTACACCGCTACACTATTCATTTCGAAATGTAAGCTTACTAGAACAATACAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009966 GO:0009987 GO:0010646 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0023051 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048583 GO:0050789 GO:0050794 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0071944 GO:0140096 GO:1900457 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KAP U-box

Protein Analysis

454

Amino Acids

48.95

Weight (kDa)

6.72

Isoelectric Point (pI)

48.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
U-box	PF04564	69 - 139	1.9e-15	U-box domain
ARM_PUB	PF25598	154 - 453	9.8e-84	Plant U-box protein ARM repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003631)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49810 AT5G65920 AT5G65920
fragaria_vesca	FvH4_1g18010 FvH4_1g18010 FvH4_1g18010 FvH4_2g32810
malus_domestica	MD08G1079800.v1.1 MD15G1066700.v1.1
prunus_persica	Prupe.1G420500_v2.0.a1 Prupe.6G218400_v2.0.a1
pyrus_communis	pycom08g06590 pycom15g06330
rosa_chinensis	RchiOBHm_Chr2g0108501 RchiOBHm_Chr6g0309891
rosa_laevigata	RLG00000010526 RLG00000017673
rosa_multiflora	Rmu_co8433595.1_g000001 Rmu_sc0000294.1_g000001 Rmu_sc0002372.1_g000052 Rmu_sc0009846.1_g000001
rosa_roxburghii	Rroxscaffold_2G00135090 Rroxscaffold_7G00159070
rosa_rugosa	Rorug02G0153700 Rorug06G0375700.1
rosa_samantha	Rh2AG202600 Rh2BG215500 Rh2CG206700 Rh2DG209800 Rh6AG489500 Rh6BG498900 Rh6CG503700 Rh6DG489900
rosa_wichuraiana	Rw2G016190 Rw6G042600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	58, 712
AccII	CGCG	2 cut(s)	89, 1178
AclWI	GGATC	4 cut(s)	174, 245, 258, 751
AcsI	RAATTY	1 cut(s)	661
AcuI	CTGAAG	2 cut(s)	191, 195
AfaI	GTAC	2 cut(s)	5, 419
AfiI	CCNNNNNNNGG	4 cut(s)	268, 883, 931, 1059
AgsI	TTSAA	8 cut(s)	484, 512, 736, 997, 1072, 1244, 1267, 1291
AjiI	CACGTC	1 cut(s)	448
AjnI	CCWGG	1 cut(s)	892
AjuI	GAANNNNNNNTTGG	2 cut(s)	492, 524
AleI	CACNNNNGTG	1 cut(s)	569
Alw21I	GWGCWC	4 cut(s)	528, 672, 984, 1287
Alw26I	GTCTC	5 cut(s)	470, 521, 746, 826, 902
AlwI	GGATC	4 cut(s)	174, 245, 258, 751
Ama87I	CYCGRG	1 cut(s)	1052
AoxI	GGCC	1 cut(s)	496
ApeKI	GCWGC	7 cut(s)	399, 542, 1131, 1220, 1228, 1231, 1277
ApoI	RAATTY	1 cut(s)	661
AspLEI	GCGC	2 cut(s)	1180, 1193
AspS9I	GGNCC	2 cut(s)	496, 611
AsuC2I	CCSGG	1 cut(s)	990
AsuHPI	GGTGA	3 cut(s)	103, 268, 377
AsuII	TTCGAA	1 cut(s)	1331
AvaI	CYCGRG	1 cut(s)	1052
AvaII	GGWCC	1 cut(s)	611
BaeGI	GKGCMC	1 cut(s)	321
BamHI	GGATCC	1 cut(s)	250
BanII	GRGCYC	4 cut(s)	528, 672, 984, 1287
BauI	CACGAG	1 cut(s)	1001
Bbv12I	GWGCWC	4 cut(s)	528, 672, 984, 1287
BbvI	GCAGC	7 cut(s)	411, 554, 1118, 1215, 1218, 1232, 1264
BccI	CCATC	6 cut(s)	15, 19, 92, 297, 715, 784
BceAI	ACGGC	1 cut(s)	614
BcgI	CGANNNNNNTGC	6 cut(s)	679, 696, 713, 730, 1123, 1157
BciT130I	CCWGG	1 cut(s)	894
BcnI	CCSGG	1 cut(s)	990
BcoDI	GTCTC	5 cut(s)	470, 521, 746, 826, 902
BfaI	CTAG	4 cut(s)	74, 684, 1031, 1347
BfuAI	ACCTGC	2 cut(s)	58, 712
BglII	AGATCT	1 cut(s)	76
BisI	GCNGC	8 cut(s)	112, 400, 543, 1132, 1221, 1229, 1232, 1278
BlpI	GCTNAGC	1 cut(s)	1281
BlsI	GCNGC	8 cut(s)	113, 401, 544, 1133, 1222, 1230, 1233, 1279
Bme1390I	CCNGG	2 cut(s)	894, 990
Bme18I	GGWCC	1 cut(s)	611
BmeT110I	CYCGRG	1 cut(s)	1052
BmgBI	CACGTC	1 cut(s)	448
BmgT120I	GGNCC	2 cut(s)	496, 611
BmiI	GGNNCC	4 cut(s)	240, 252, 612, 875
BmrFI	CCNGG	2 cut(s)	894, 990
BmrI	ACTGGG	1 cut(s)	1089
BmsI	GCATC	2 cut(s)	40, 687
BmuI	ACTGGG	1 cut(s)	1089
BpmI	CTGGAG	2 cut(s)	212, 485
Bpu1102I	GCTNAGC	1 cut(s)	1281
Bpu14I	TTCGAA	1 cut(s)	1331
BpuEI	CTTGAG	3 cut(s)	503, 808, 893
BpuMI	CCSGG	1 cut(s)	990
Bsa29I	ATCGAT	2 cut(s)	746, 1151
BsaI	GGTCTC	2 cut(s)	521, 902
BsaJI	CCNNGG	2 cut(s)	87, 1053
BsaWI	WCCGGW	1 cut(s)	253
BsaXI	ACNNNNNCTCC	4 cut(s)	132, 162, 179, 209
Bsc4I	CCNNNNNNNGG	4 cut(s)	268, 883, 931, 1059
Bse1I	ACTGG	2 cut(s)	388, 1095
BseBI	CCWGG	1 cut(s)	894
BseCI	ATCGAT	2 cut(s)	746, 1151
BseDI	CCNNGG	2 cut(s)	87, 1053
BseGI	GGATG	3 cut(s)	7, 45, 361
BseLI	CCNNNNNNNGG	4 cut(s)	268, 883, 931, 1059
BseMII	CTCAG	6 cut(s)	313, 541, 685, 913, 1151, 1272
BseNI	ACTGG	2 cut(s)	388, 1095
BseRI	GAGGAG	2 cut(s)	200, 589
BseSI	GKGCMC	1 cut(s)	321
BseXI	GCAGC	7 cut(s)	411, 554, 1118, 1215, 1218, 1232, 1264
BsgI	GTGCAG	2 cut(s)	470, 1117
Bsh1236I	CGCG	2 cut(s)	89, 1178
BshFI	GGCC	1 cut(s)	498
BshVI	ATCGAT	2 cut(s)	746, 1151
BsiHKAI	GWGCWC	4 cut(s)	528, 672, 984, 1287
BsiHKCI	CYCGRG	1 cut(s)	1052
BsiSI	CCGG	2 cut(s)	254, 990
BslFI	GGGAC	2 cut(s)	664, 1065
BslI	CCNNNNNNNGG	4 cut(s)	268, 883, 931, 1059
BsmAI	GTCTC	5 cut(s)	470, 521, 746, 826, 902
BsmBI	CGTCTC	1 cut(s)	746
BsmFI	GGGAC	2 cut(s)	664, 1065
BsmI	GAATGC	1 cut(s)	1193
BsnI	GGCC	1 cut(s)	498
Bso31I	GGTCTC	2 cut(s)	521, 902
BsoBI	CYCGRG	1 cut(s)	1052
Bsp119I	TTCGAA	1 cut(s)	1331
Bsp1286I	GDGCHC	5 cut(s)	321, 528, 672, 984, 1287
Bsp143I	GATC	8 cut(s)	76, 166, 250, 287, 594, 743, 759, 1152
Bsp1720I	GCTNAGC	1 cut(s)	1281
BspANI	GGCC	1 cut(s)	498
BspCNI	CTCAG	6 cut(s)	312, 540, 684, 912, 1150, 1273
BspDI	ATCGAT	2 cut(s)	746, 1151
BspFNI	CGCG	2 cut(s)	89, 1178
BspLI	GGNNCC	4 cut(s)	240, 252, 612, 875
BspMI	ACCTGC	2 cut(s)	58, 712
BspPI	GGATC	4 cut(s)	174, 245, 258, 751
BspT104I	TTCGAA	1 cut(s)	1331
BspTNI	GGTCTC	2 cut(s)	521, 902
BsrI	ACTGG	2 cut(s)	388, 1095
BssECI	CCNNGG	2 cut(s)	87, 1053
BssMI	GATC	8 cut(s)	76, 166, 250, 287, 594, 743, 759, 1152
BssSI	CACGAG	1 cut(s)	1001
Bst2BI	CACGAG	1 cut(s)	1001
Bst2UI	CCWGG	1 cut(s)	894
Bst4CI	ACNGT	2 cut(s)	568, 1359
BstAPI	GCANNNNNTGC	1 cut(s)	548
BstBI	TTCGAA	1 cut(s)	1331
BstC8I	GCNNGC	7 cut(s)	55, 627, 1065, 1143, 1172, 1176, 1200
BstDEI	CTNAG	6 cut(s)	299, 527, 671, 899, 1137, 1281
BstDSI	CCRYGG	1 cut(s)	87
BstEII	GGTNACC	1 cut(s)	256
BstF5I	GGATG	3 cut(s)	7, 45, 361
BstFNI	CGCG	2 cut(s)	89, 1178
BstHHI	GCGC	2 cut(s)	1180, 1193
BstKTI	GATC	8 cut(s)	79, 169, 253, 290, 597, 746, 762, 1155
BstMAI	GTCTC	5 cut(s)	470, 521, 746, 826, 902
BstMBI	GATC	8 cut(s)	76, 166, 250, 287, 594, 743, 759, 1152
BstMWI	GCNNNNNNNGC	5 cut(s)	117, 548, 1199, 1208, 1217
BstNI	CCWGG	1 cut(s)	894
BstPI	GGTNACC	1 cut(s)	256
BstSCI	CCNGG	2 cut(s)	892, 988
BstSLI	GKGCMC	1 cut(s)	321
BstUI	CGCG	2 cut(s)	89, 1178
BstV1I	GCAGC	7 cut(s)	411, 554, 1118, 1215, 1218, 1232, 1264
BstX2I	RGATCY	3 cut(s)	76, 166, 250
BstXI	CCANNNNNNTGG	2 cut(s)	14, 18
BstYI	RGATCY	3 cut(s)	76, 166, 250
Bsu15I	ATCGAT	2 cut(s)	746, 1151
BsuRI	GGCC	1 cut(s)	498
BsuTUI	ATCGAT	2 cut(s)	746, 1151
BtgI	CCRYGG	1 cut(s)	87
BtrI	CACGTC	1 cut(s)	448
BtsCI	GGATG	3 cut(s)	7, 45, 361
BtsI	GCAGTG	1 cut(s)	64
BtsIMutI	CAGTG	4 cut(s)	64, 219, 573, 1102
BveI	ACCTGC	2 cut(s)	58, 712
Cac8I	GCNNGC	7 cut(s)	55, 627, 1065, 1143, 1172, 1176, 1200
CfoI	GCGC	2 cut(s)	1180, 1193
Cfr13I	GGNCC	2 cut(s)	496, 611
Cfr42I	CCGCGG	1 cut(s)	90
ClaI	ATCGAT	2 cut(s)	746, 1151
Csp6I	GTAC	2 cut(s)	4, 418
CviAII	CATG	2 cut(s)	548, 1025
CviQI	GTAC	2 cut(s)	4, 418
DdeI	CTNAG	6 cut(s)	299, 527, 671, 899, 1137, 1281
DpnI	GATC	8 cut(s)	78, 168, 252, 289, 596, 745, 761, 1154
DpnII	GATC	8 cut(s)	76, 166, 250, 287, 594, 743, 759, 1152
EciI	GGCGGA	4 cut(s)	129, 153, 170, 827
Ecl136II	GAGCTC	4 cut(s)	526, 670, 982, 1285
Eco24I	GRGCYC	4 cut(s)	528, 672, 984, 1287
Eco31I	GGTCTC	2 cut(s)	521, 902
Eco47I	GGWCC	1 cut(s)	611
Eco53kI	GAGCTC	4 cut(s)	526, 670, 982, 1285
Eco57I	CTGAAG	2 cut(s)	191, 195
Eco88I	CYCGRG	1 cut(s)	1052
Eco91I	GGTNACC	1 cut(s)	256
EcoICRI	GAGCTC	4 cut(s)	526, 670, 982, 1285
EcoO109I	RGGNCCY	1 cut(s)	611
EcoO65I	GGTNACC	1 cut(s)	256
EcoRII	CCWGG	1 cut(s)	892
EcoT38I	GRGCYC	4 cut(s)	528, 672, 984, 1287
Esp3I	CGTCTC	1 cut(s)	746
FaeI	CATG	2 cut(s)	551, 1028
FaiI	YATR	3 cut(s)	549, 731, 1026
FalI	AAGNNNNNCTT	2 cut(s)	1051, 1083
FaqI	GGGAC	2 cut(s)	664, 1065
FatI	CATG	2 cut(s)	547, 1024
FauI	CCCGC	2 cut(s)	113, 1204
Fnu4HI	GCNGC	8 cut(s)	112, 400, 543, 1132, 1221, 1229, 1232, 1278
FokI	GGATG	2 cut(s)	52, 368
FriOI	GRGCYC	4 cut(s)	528, 672, 984, 1287
Fsp4HI	GCNGC	8 cut(s)	112, 400, 543, 1132, 1221, 1229, 1232, 1278
FspBI	CTAG	4 cut(s)	74, 684, 1031, 1347
GlaI	GCGC	2 cut(s)	1179, 1192
GluI	GCNGC	8 cut(s)	112, 400, 543, 1132, 1221, 1229, 1232, 1278
GsuI	CTGGAG	2 cut(s)	212, 485
HaeIII	GGCC	1 cut(s)	498
HapII	CCGG	2 cut(s)	254, 990
HhaI	GCGC	2 cut(s)	1180, 1193
Hin1II	CATG	2 cut(s)	551, 1028
Hin6I	GCGC	2 cut(s)	1178, 1191
HinP1I	GCGC	2 cut(s)	1178, 1191
HincII	GTYRAC	1 cut(s)	1044
HindII	GTYRAC	1 cut(s)	1044
HindIII	AAGCTT	2 cut(s)	826, 1340
HinfI	GANTC	9 cut(s)	141, 194, 205, 359, 652, 680, 691, 929, 997
HpaII	CCGG	2 cut(s)	254, 990
HphI	GGTGA	3 cut(s)	103, 268, 377
Hpy166II	GTNNAC	2 cut(s)	574, 1044
Hpy188I	TCNGA	9 cut(s)	171, 276, 302, 442, 530, 640, 679, 696, 1126
Hpy188III	TCNNGA	9 cut(s)	74, 80, 424, 464, 910, 937, 1001, 1052, 1288
Hpy8I	GTNNAC	2 cut(s)	574, 1044
Hpy99I	CGWCG	2 cut(s)	425, 760
HpyAV	CCTTC	7 cut(s)	219, 392, 481, 525, 1031, 1053, 1111
HpyCH4III	ACNGT	2 cut(s)	568, 1359
HpyCH4IV	ACGT	3 cut(s)	420, 447, 832
HpyF10VI	GCNNNNNNNGC	5 cut(s)	117, 548, 1199, 1208, 1217
HpyF3I	CTNAG	6 cut(s)	299, 527, 671, 899, 1137, 1281
HpySE526I	ACGT	3 cut(s)	420, 447, 832
Hsp92II	CATG	2 cut(s)	551, 1028
HspAI	GCGC	2 cut(s)	1178, 1191
KspI	CCGCGG	1 cut(s)	90
Kzo9I	GATC	8 cut(s)	76, 166, 250, 287, 594, 743, 759, 1152
LmnI	GCTCC	5 cut(s)	187, 238, 346, 523, 667
Lsp1109I	GCAGC	7 cut(s)	411, 554, 1118, 1215, 1218, 1232, 1264
LweI	GCATC	2 cut(s)	40, 687
MaeI	CTAG	4 cut(s)	74, 684, 1031, 1347
MaeII	ACGT	3 cut(s)	420, 447, 832
MaeIII	GTNAC	2 cut(s)	256, 364
MalI	GATC	8 cut(s)	78, 168, 252, 289, 596, 745, 761, 1154
MboI	GATC	8 cut(s)	76, 166, 250, 287, 594, 743, 759, 1152
MboII	GAAGA	4 cut(s)	184, 187, 442, 496
MfeI	CAATTG	3 cut(s)	645, 763, 971
MflI	RGATCY	3 cut(s)	76, 166, 250
MhlI	GDGCHC	5 cut(s)	321, 528, 672, 984, 1287
MluCI	AATT	9 cut(s)	126, 645, 661, 763, 773, 915, 971, 1239, 1306
MlyI	GAGTC	5 cut(s)	150, 203, 646, 689, 700
MmeI	TCCRAC	4 cut(s)	144, 216, 618, 823
MseI	TTAA	2 cut(s)	125, 492
MslI	CAYNNNNRTG	3 cut(s)	16, 338, 569
MspA1I	CMGCKG	2 cut(s)	89, 402
MspI	CCGG	2 cut(s)	254, 990
MspR9I	CCNGG	2 cut(s)	894, 990
MunI	CAATTG	3 cut(s)	645, 763, 971
Mva1269I	GAATGC	1 cut(s)	1193
MvaI	CCWGG	1 cut(s)	894
MvnI	CGCG	2 cut(s)	89, 1178
MwoI	GCNNNNNNNGC	5 cut(s)	117, 548, 1199, 1208, 1217
NciI	CCSGG	1 cut(s)	990
NdeII	GATC	8 cut(s)	76, 166, 250, 287, 594, 743, 759, 1152
NlaIII	CATG	2 cut(s)	551, 1028
NlaIV	GGNNCC	4 cut(s)	240, 252, 612, 875
NmuCI	GTSAC	2 cut(s)	256, 364
NspV	TTCGAA	1 cut(s)	1331
OliI	CACNNNNGTG	1 cut(s)	569
PcsI	WCGNNNNNNNCGW	2 cut(s)	752, 1182
PctI	GAATGC	1 cut(s)	1193
PfeI	GAWTC	4 cut(s)	205, 359, 929, 997
PkrI	GCNGC	8 cut(s)	113, 401, 544, 1133, 1222, 1230, 1233, 1279
PleI	GAGTC	5 cut(s)	149, 202, 646, 688, 699
PpsI	GAGTC	5 cut(s)	149, 202, 646, 688, 699
PpuMI	RGGWCCY	1 cut(s)	611
Psp124BI	GAGCTC	4 cut(s)	528, 672, 984, 1287
Psp5II	RGGWCCY	1 cut(s)	611
Psp6I	CCWGG	1 cut(s)	892
PspEI	GGTNACC	1 cut(s)	256
PspGI	CCWGG	1 cut(s)	892
PspN4I	GGNNCC	4 cut(s)	240, 252, 612, 875
PspPI	GGNCC	2 cut(s)	496, 611
PspPPI	RGGWCCY	1 cut(s)	611
PsuI	RGATCY	3 cut(s)	76, 166, 250
PvuII	CAGCTG	1 cut(s)	402
RsaI	GTAC	2 cut(s)	5, 419
RsaNI	GTAC	2 cut(s)	4, 418
RseI	CAYNNNNRTG	3 cut(s)	16, 338, 569
SacI	GAGCTC	4 cut(s)	528, 672, 984, 1287
SacII	CCGCGG	1 cut(s)	90
SaqAI	TTAA	2 cut(s)	125, 492
SatI	GCNGC	8 cut(s)	112, 400, 543, 1132, 1221, 1229, 1232, 1278
Sau3AI	GATC	8 cut(s)	76, 166, 250, 287, 594, 743, 759, 1152
Sau96I	GGNCC	2 cut(s)	496, 611
SchI	GAGTC	5 cut(s)	150, 203, 646, 689, 700
ScrFI	CCNGG	2 cut(s)	894, 990
SduI	GDGCHC	5 cut(s)	321, 528, 672, 984, 1287
SfaNI	GCATC	2 cut(s)	40, 687
Sfr303I	CCGCGG	1 cut(s)	90
SfuI	TTCGAA	1 cut(s)	1331
SgrBI	CCGCGG	1 cut(s)	90
SinI	GGWCC	1 cut(s)	611
SmiMI	CAYNNNNRTG	3 cut(s)	16, 338, 569
SmlI	CTYRAG	3 cut(s)	518, 823, 908
SmoI	CTYRAG	3 cut(s)	518, 823, 908
Sse9I	AATT	9 cut(s)	126, 645, 661, 763, 773, 915, 971, 1239, 1306
SspMI	CTAG	4 cut(s)	74, 684, 1031, 1347
SstI	GAGCTC	4 cut(s)	528, 672, 984, 1287
StyD4I	CCNGG	2 cut(s)	892, 988
TaaI	ACNGT	2 cut(s)	568, 1359
TaiI	ACGT	3 cut(s)	423, 450, 835
TaqI	TCGA	4 cut(s)	290, 746, 1151, 1331
TaqII	GACCGA	1 cut(s)	922
TasI	AATT	9 cut(s)	126, 645, 661, 763, 773, 915, 971, 1239, 1306
TauI	GCSGC	1 cut(s)	114
TfiI	GAWTC	4 cut(s)	205, 359, 929, 997
Tru1I	TTAA	2 cut(s)	125, 492
Tru9I	TTAA	2 cut(s)	125, 492
TscAI	CASTG	4 cut(s)	64, 219, 573, 1102
TseFI	GTSAC	2 cut(s)	256, 364
TseI	GCWGC	7 cut(s)	399, 542, 1131, 1220, 1228, 1231, 1277
Tsp45I	GTSAC	2 cut(s)	256, 364
TspDTI	ATGAA	6 cut(s)	56, 208, 443, 1013, 1130, 1315
TspRI	CASTG	4 cut(s)	64, 219, 573, 1102
VpaK11BI	GGWCC	1 cut(s)	611
XapI	RAATTY	1 cut(s)	661
XbaI	TCTAGA	1 cut(s)	73
XspI	CTAG	4 cut(s)	74, 684, 1031, 1347

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.