pycom15g07430

Transcription factor

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
4544330 .. 4546832
2503 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g07430.5

Sequence Viewer

Length: 1050 bp
ATGGCGGATCTGTACGGAACAGCGCCGGACTCGGAAGAAATCTCGAACATTCTAAGCCAGCTCATCCACGGCCATGGCTCCTCCGCTTCCTCCGCCTCTTCTTGCATGCCCTTTAAACCCACTTACATGCATTCGTCAGTGCCGCCACCAATCCAGGCGGCGACGCCGTCCGAGGTCTTGATTCCGGAGGCCAGGCATGAGGATCATCGCCGGTTTGCTCAATTGGTGAACCAGTCTGGCACGGACCAGCGAGTAGCGGGGGGGAATTCGAACTCTGCTGGTGTGTTGGATTCGTCGACCGCTTTCGATTTCTACGATTCCGGTGGCTACTTCACGAAGGAGGTGAAAGAAGGTATGGAGTCTGACGGGAGGAGGATTTCGTCTGAGAATGATCTCGGCGGTTATAGCTGTGACAGTGAGGATCTCGAGGAGGCGGCGGATGGGCAACTGAACTCAGCGCCGCCGCGGAGTTCATCGAAGAGGAGCAGAGCTGCTGAGGTCCATAATATGTCGGAAAAGAGAAGGAGGAGTAGGATTAATGAAAAGATGAAAGCTTTGCAGAACCTGATTCCGAATTCTAACAAGACGGATAAGGCGTCAATGCTGGATGAAGTGATTGAATATTTGAAGCAGCTCCAGCTTCAAGTACAGATGTTAACAATGAGGAATGGATTGAGTTTGCATCCGATGTGTTTACCAGGAGTCATGCAGCCTATGCAGTTGCCTCATATATTTGAAGAAGGAAGTAATAAATTTCCAAAATCTGGCAAAGGAATAAGCCCTTTTTACGGGACTCATGAGAACTCGGTGCTGTCTGCTTTTAATTTATCCGCTGGATGCATGATATCAAATCCGCCAATGGTCTTACCCTCGGTTGCAAATGTAGCAACTTCAGAAGCCACATTTGGTTTTGAACCATCGATTCAAGCTCACTACAGACCCTTCAGTGTCCCCTCCTCCTCTAAGGAACTCTTTAGCGACGGTGAACCACAATCAAAATTACATACCATTCGGACAGGGAAAAGCACTTCGTCGGACGTTGATGTATGA

Protein Analysis

350

Amino Acids

37.91

Weight (kDa)

5.68

Isoelectric Point (pI)

75.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012416)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 764
AccI GTMKAC 1 cut(s) 296
AccII CGCG 1 cut(s) 466
AccIII TCCGGA 1 cut(s) 184
AclWI GGATC 3 cut(s) 15, 210, 429
AcoI YGGCCR 1 cut(s) 70
AcsI RAATTY 3 cut(s) 265, 574, 752
AcuI CTGAAG 2 cut(s) 876, 928
AcyI GRCGYC 2 cut(s) 164, 596
AfaI GTAC 2 cut(s) 14, 648
AfiI CCNNNNNNNGG 2 cut(s) 764, 788
AgsI TTSAA 6 cut(s) 620, 628, 644, 737, 914, 926
AjnI CCWGG 3 cut(s) 153, 191, 697
AjuI GAANNNNNNNTTGG 2 cut(s) 888, 920
AluBI AGCT 7 cut(s) 61, 408, 491, 554, 634, 640, 929
AluI AGCT 7 cut(s) 61, 408, 491, 554, 634, 640, 929
AlwI GGATC 3 cut(s) 15, 210, 429
AlwNI CAGNNNCTG 1 cut(s) 565
Ama87I CYCGRG 1 cut(s) 425
Aor13HI TCCGGA 1 cut(s) 184
AoxI GGCC 2 cut(s) 70, 189
ApeKI GCWGC 3 cut(s) 491, 631, 709
ApoI RAATTY 3 cut(s) 265, 574, 752
AseI ATTAAT 1 cut(s) 537
AspLEI GCGC 2 cut(s) 25, 460
AspS9I GGNCC 2 cut(s) 244, 499
AsuHPI GGTGA 3 cut(s) 238, 355, 995
AsuII TTCGAA 1 cut(s) 269
AvaI CYCGRG 1 cut(s) 425
AvaII GGWCC 2 cut(s) 244, 499
BbvCI CCTCAGC 1 cut(s) 495
BbvI GCAGC 3 cut(s) 478, 643, 721
BccI CCATC 2 cut(s) 434, 925
BceAI ACGGC 2 cut(s) 85, 151
BciT130I CCWGG 3 cut(s) 155, 193, 699
BfmI CTRYAG 1 cut(s) 934
BfoI RGCGCY 2 cut(s) 26, 461
BisI GCNGC 8 cut(s) 143, 159, 435, 461, 464, 492, 632, 710
BlsI GCNGC 8 cut(s) 144, 160, 436, 462, 465, 493, 633, 711
Bme1390I CCNGG 3 cut(s) 155, 193, 699
Bme18I GGWCC 2 cut(s) 244, 499
BmeT110I CYCGRG 1 cut(s) 425
BmgT120I GGNCC 2 cut(s) 244, 499
BmiI GGNNCC 1 cut(s) 79
BmrFI CCNGG 3 cut(s) 155, 193, 699
BmsI GCATC 2 cut(s) 691, 827
BpmI CTGGAG 1 cut(s) 620
Bpu10I CCTNAGC 1 cut(s) 495
Bpu14I TTCGAA 1 cut(s) 269
Bsa29I ATCGAT 1 cut(s) 920
BsaHI GRCGYC 2 cut(s) 164, 596
BsaJI CCNNGG 5 cut(s) 67, 73, 171, 464, 870
BsaWI WCCGGW 2 cut(s) 184, 320
Bsc4I CCNNNNNNNGG 2 cut(s) 764, 788
Bse118I RCCGGY 1 cut(s) 210
Bse1I ACTGG 1 cut(s) 232
BseAI TCCGGA 1 cut(s) 184
BseBI CCWGG 3 cut(s) 155, 193, 699
BseCI ATCGAT 1 cut(s) 920
BseDI CCNNGG 5 cut(s) 67, 73, 171, 464, 870
BseGI GGATG 5 cut(s) 63, 445, 613, 682, 842
BseLI CCNNNNNNNGG 2 cut(s) 764, 788
BseMII CTCAG 3 cut(s) 375, 468, 486
BseNI ACTGG 1 cut(s) 232
BseRI GAGGAG 7 cut(s) 70, 385, 443, 496, 541, 946, 949
BseXI GCAGC 3 cut(s) 478, 643, 721
Bsh1236I CGCG 1 cut(s) 466
Bsh1285I CGRYCG 1 cut(s) 300
BshFI GGCC 2 cut(s) 72, 191
BshVI ATCGAT 1 cut(s) 920
BsiEI CGRYCG 1 cut(s) 300
BsiHKCI CYCGRG 1 cut(s) 425
BsiSI CCGG 4 cut(s) 26, 185, 211, 321
BslFI GGGAC 2 cut(s) 805, 935
BslI CCNNNNNNNGG 2 cut(s) 764, 788
BsmFI GGGAC 2 cut(s) 805, 935
BsmI GAATGC 1 cut(s) 130
BsnI GGCC 2 cut(s) 72, 191
BsoBI CYCGRG 1 cut(s) 425
Bsp119I TTCGAA 1 cut(s) 269
Bsp13I TCCGGA 1 cut(s) 184
Bsp143I GATC 4 cut(s) 7, 202, 391, 421
Bsp19I CCATGG 1 cut(s) 73
BspANI GGCC 2 cut(s) 72, 191
BspCNI CTCAG 3 cut(s) 376, 467, 487
BspDI ATCGAT 1 cut(s) 920
BspEI TCCGGA 1 cut(s) 184
BspFNI CGCG 1 cut(s) 466
BspHI TCATGA 1 cut(s) 796
BspLI GGNNCC 1 cut(s) 79
BspPI GGATC 3 cut(s) 15, 210, 429
BspT104I TTCGAA 1 cut(s) 269
BsrFI RCCGGY 1 cut(s) 210
BsrI ACTGG 1 cut(s) 232
BssAI RCCGGY 1 cut(s) 210
BssECI CCNNGG 5 cut(s) 67, 73, 171, 464, 870
BssMI GATC 4 cut(s) 7, 202, 391, 421
BssNI GRCGYC 2 cut(s) 164, 596
BssT1I CCWWGG 1 cut(s) 73
Bst2UI CCWGG 3 cut(s) 155, 193, 699
Bst4CI ACNGT 2 cut(s) 416, 983
Bst6I CTCTTC 2 cut(s) 103, 473
BstACI GRCGYC 2 cut(s) 164, 596
BstAPI GCANNNNNTGC 1 cut(s) 715
BstBI TTCGAA 1 cut(s) 269
BstC8I GCNNGC 2 cut(s) 59, 107
BstDEI CTNAG 5 cut(s) 53, 384, 454, 495, 963
BstDSI CCRYGG 3 cut(s) 67, 73, 464
BstF5I GGATG 5 cut(s) 63, 445, 613, 682, 842
BstFNI CGCG 1 cut(s) 466
BstH2I RGCGCY 2 cut(s) 26, 461
BstHHI GCGC 2 cut(s) 25, 460
BstKTI GATC 4 cut(s) 10, 205, 394, 424
BstMBI GATC 4 cut(s) 7, 202, 391, 421
BstMCI CGRYCG 1 cut(s) 300
BstMWI GCNNNNNNNGC 5 cut(s) 92, 405, 637, 715, 884
BstNI CCWGG 3 cut(s) 155, 193, 699
BstNSI RCATGY 2 cut(s) 109, 130
BstSCI CCNGG 3 cut(s) 153, 191, 697
BstSFI CTRYAG 1 cut(s) 934
BstUI CGCG 1 cut(s) 466
BstV1I GCAGC 3 cut(s) 478, 643, 721
BstX2I RGATCY 2 cut(s) 7, 421
BstXI CCANNNNNNTGG 1 cut(s) 74
BstYI RGATCY 2 cut(s) 7, 421
Bsu15I ATCGAT 1 cut(s) 920
BsuRI GGCC 2 cut(s) 72, 191
BsuTUI ATCGAT 1 cut(s) 920
BtgI CCRYGG 3 cut(s) 67, 73, 464
BtgZI GCGATG 1 cut(s) 191
BtsCI GGATG 5 cut(s) 63, 445, 613, 682, 842
BtsIMutI CAGTG 3 cut(s) 144, 421, 952
Cac8I GCNNGC 2 cut(s) 59, 107
CaiI CAGNNNCTG 1 cut(s) 565
CciI TCATGA 1 cut(s) 796
CfoI GCGC 2 cut(s) 25, 460
Cfr10I RCCGGY 1 cut(s) 210
Cfr13I GGNCC 2 cut(s) 244, 499
Cfr42I CCGCGG 1 cut(s) 467
ClaI ATCGAT 1 cut(s) 920
CseI GACGC 2 cut(s) 172, 585
Csp6I GTAC 2 cut(s) 13, 647
CviAII CATG 7 cut(s) 74, 106, 127, 197, 706, 797, 841
CviQI GTAC 2 cut(s) 13, 647
DdeI CTNAG 5 cut(s) 53, 384, 454, 495, 963
DpnI GATC 4 cut(s) 9, 204, 393, 423
DpnII GATC 4 cut(s) 7, 202, 391, 421
DraI TTTAAA 1 cut(s) 115
EaeI YGGCCR 1 cut(s) 70
Eam1104I CTCTTC 2 cut(s) 103, 473
EarI CTCTTC 2 cut(s) 103, 473
EciI GGCGGA 4 cut(s) 20, 82, 452, 843
Eco130I CCWWGG 1 cut(s) 73
Eco32I GATATC 1 cut(s) 846
Eco47I GGWCC 2 cut(s) 244, 499
Eco57I CTGAAG 2 cut(s) 876, 928
Eco88I CYCGRG 1 cut(s) 425
EcoRI GAATTC 2 cut(s) 265, 574
EcoRII CCWGG 3 cut(s) 153, 191, 697
EcoRV GATATC 1 cut(s) 846
EcoT14I CCWWGG 1 cut(s) 73
EcoT22I ATGCAT 2 cut(s) 132, 842
ErhI CCWWGG 1 cut(s) 73
FaeI CATG 7 cut(s) 77, 109, 130, 200, 709, 800, 844
FalI AAGNNNNNCTT 2 cut(s) 956, 988
FaqI GGGAC 2 cut(s) 805, 935
FatI CATG 7 cut(s) 73, 105, 126, 196, 705, 796, 840
FauI CCCGC 1 cut(s) 250
FblI GTMKAC 1 cut(s) 296
Fnu4HI GCNGC 8 cut(s) 143, 159, 435, 461, 464, 492, 632, 710
FokI GGATG 5 cut(s) 50, 452, 620, 669, 849
Fsp4HI GCNGC 8 cut(s) 143, 159, 435, 461, 464, 492, 632, 710
GlaI GCGC 2 cut(s) 24, 459
GluI GCNGC 8 cut(s) 143, 159, 435, 461, 464, 492, 632, 710
GsuI CTGGAG 1 cut(s) 620
HaeII RGCGCY 2 cut(s) 26, 461
HaeIII GGCC 2 cut(s) 72, 191
HapII CCGG 4 cut(s) 26, 185, 211, 321
HgaI GACGC 2 cut(s) 172, 585
HhaI GCGC 2 cut(s) 25, 460
Hin1I GRCGYC 2 cut(s) 164, 596
Hin1II CATG 7 cut(s) 77, 109, 130, 200, 709, 800, 844
Hin6I GCGC 2 cut(s) 23, 458
HinP1I GCGC 2 cut(s) 23, 458
HincII GTYRAC 2 cut(s) 297, 657
HindII GTYRAC 2 cut(s) 297, 657
HindIII AAGCTT 1 cut(s) 552
HinfI GANTC 9 cut(s) 29, 181, 290, 317, 359, 568, 702, 793, 922
HpaI GTTAAC 1 cut(s) 657
HpaII CCGG 4 cut(s) 26, 185, 211, 321
HphI GGTGA 3 cut(s) 238, 355, 995
Hpy166II GTNNAC 5 cut(s) 229, 297, 657, 695, 986
Hpy188III TCNNGA 6 cut(s) 43, 178, 185, 334, 425, 797
Hpy8I GTNNAC 5 cut(s) 229, 297, 657, 695, 986
Hpy99I CGWCG 4 cut(s) 166, 298, 983, 1036
HpyAV CCTTC 5 cut(s) 331, 344, 516, 734, 952
HpyCH4III ACNGT 2 cut(s) 416, 983
HpyCH4IV ACGT 1 cut(s) 1038
HpyCH4V TGCA 8 cut(s) 105, 130, 559, 682, 709, 718, 840, 878
HpyF10VI GCNNNNNNNGC 5 cut(s) 92, 405, 637, 715, 884
HpyF3I CTNAG 5 cut(s) 53, 384, 454, 495, 963
HpySE526I ACGT 1 cut(s) 1038
Hsp92I GRCGYC 2 cut(s) 164, 596
Hsp92II CATG 7 cut(s) 77, 109, 130, 200, 709, 800, 844
HspAI GCGC 2 cut(s) 23, 458
Kpn2I TCCGGA 1 cut(s) 184
KspAI GTTAAC 1 cut(s) 657
KspI CCGCGG 1 cut(s) 467
Kzo9I GATC 4 cut(s) 7, 202, 391, 421
LmnI GCTCC 3 cut(s) 83, 483, 639
Lsp1109I GCAGC 3 cut(s) 478, 643, 721
LweI GCATC 2 cut(s) 691, 827
MaeII ACGT 1 cut(s) 1038
MaeIII GTNAC 1 cut(s) 410
MalI GATC 4 cut(s) 9, 204, 393, 423
MboI GATC 4 cut(s) 7, 202, 391, 421
MboII GAAGA 4 cut(s) 47, 90, 490, 749
MfeI CAATTG 1 cut(s) 221
MflI RGATCY 2 cut(s) 7, 421
MluCI AATT 6 cut(s) 221, 265, 574, 752, 823, 998
MlyI GAGTC 4 cut(s) 23, 368, 711, 787
MmeI TCCRAC 3 cut(s) 267, 492, 1014
Mph1103I ATGCAT 2 cut(s) 132, 842
MroI TCCGGA 1 cut(s) 184
MseI TTAA 4 cut(s) 114, 537, 656, 822
MslI CAYNNNNRTG 2 cut(s) 72, 125
MspA1I CMGCKG 2 cut(s) 466, 833
MspI CCGG 4 cut(s) 26, 185, 211, 321
MspR9I CCNGG 3 cut(s) 155, 193, 699
MunI CAATTG 1 cut(s) 221
Mva1269I GAATGC 1 cut(s) 130
MvaI CCWGG 3 cut(s) 155, 193, 699
MvnI CGCG 1 cut(s) 466
MwoI GCNNNNNNNGC 5 cut(s) 92, 405, 637, 715, 884
NcoI CCATGG 1 cut(s) 73
NdeII GATC 4 cut(s) 7, 202, 391, 421
NlaIII CATG 7 cut(s) 77, 109, 130, 200, 709, 800, 844
NlaIV GGNNCC 1 cut(s) 79
NmeAIII GCCGAG 1 cut(s) 375
NmuCI GTSAC 1 cut(s) 410
NsiI ATGCAT 2 cut(s) 132, 842
NspI RCATGY 2 cut(s) 109, 130
NspV TTCGAA 1 cut(s) 269
PaeI GCATGC 1 cut(s) 109
PaeR7I CTCGAG 1 cut(s) 425
PagI TCATGA 1 cut(s) 796
PcsI WCGNNNNNNNCGW 2 cut(s) 312, 593
PctI GAATGC 1 cut(s) 130
PfeI GAWTC 5 cut(s) 181, 290, 317, 568, 922
PflFI GACNNNGTC 1 cut(s) 166
PflMI CCANNNNNTGG 1 cut(s) 764
PkrI GCNGC 8 cut(s) 144, 160, 436, 462, 465, 493, 633, 711
PleI GAGTC 4 cut(s) 23, 367, 710, 787
PpsI GAGTC 4 cut(s) 23, 367, 710, 787
PshBI ATTAAT 1 cut(s) 537
Psp6I CCWGG 3 cut(s) 153, 191, 697
PspGI CCWGG 3 cut(s) 153, 191, 697
PspN4I GGNNCC 1 cut(s) 79
PspPI GGNCC 2 cut(s) 244, 499
PstNI CAGNNNCTG 1 cut(s) 565
PsuI RGATCY 2 cut(s) 7, 421
PsyI GACNNNGTC 1 cut(s) 166
RsaI GTAC 2 cut(s) 14, 648
RsaNI GTAC 2 cut(s) 13, 647
RseI CAYNNNNRTG 2 cut(s) 72, 125
SacII CCGCGG 1 cut(s) 467
SalI GTCGAC 1 cut(s) 295
SaqAI TTAA 4 cut(s) 114, 537, 656, 822
SatI GCNGC 8 cut(s) 143, 159, 435, 461, 464, 492, 632, 710
Sau3AI GATC 4 cut(s) 7, 202, 391, 421
Sau96I GGNCC 2 cut(s) 244, 499
SchI GAGTC 4 cut(s) 23, 368, 711, 787
ScrFI CCNGG 3 cut(s) 155, 193, 699
SfaNI GCATC 2 cut(s) 691, 827
SfcI CTRYAG 1 cut(s) 934
Sfr274I CTCGAG 1 cut(s) 425
Sfr303I CCGCGG 1 cut(s) 467
SfuI TTCGAA 1 cut(s) 269
SgrBI CCGCGG 1 cut(s) 467
SinI GGWCC 2 cut(s) 244, 499
SlaI CTCGAG 1 cut(s) 425
SmiMI CAYNNNNRTG 2 cut(s) 72, 125
SmlI CTYRAG 1 cut(s) 425
SmoI CTYRAG 1 cut(s) 425
SphI GCATGC 1 cut(s) 109
Sse9I AATT 6 cut(s) 221, 265, 574, 752, 823, 998
SspI AATATT 1 cut(s) 623
StyD4I CCNGG 3 cut(s) 153, 191, 697
StyI CCWWGG 1 cut(s) 73
TaaI ACNGT 2 cut(s) 416, 983
TaiI ACGT 1 cut(s) 1041
TaqI TCGA 7 cut(s) 44, 269, 296, 306, 426, 476, 920
TasI AATT 6 cut(s) 221, 265, 574, 752, 823, 998
TatI WGTACW 1 cut(s) 646
TauI GCSGC 5 cut(s) 145, 161, 437, 463, 466
TfiI GAWTC 5 cut(s) 181, 290, 317, 568, 922
Tru1I TTAA 4 cut(s) 114, 537, 656, 822
Tru9I TTAA 4 cut(s) 114, 537, 656, 822
TscAI CASTG 3 cut(s) 144, 421, 952
TseFI GTSAC 1 cut(s) 410
TseI GCWGC 3 cut(s) 491, 631, 709
Tsp45I GTSAC 1 cut(s) 410
TspDTI ATGAA 4 cut(s) 462, 555, 563, 624
TspGWI ACGGA 3 cut(s) 30, 257, 602
TspRI CASTG 3 cut(s) 144, 421, 952
Tth111I GACNNNGTC 1 cut(s) 166
Van91I CCANNNNNTGG 1 cut(s) 764
VpaK11BI GGWCC 2 cut(s) 244, 499
VspI ATTAAT 1 cut(s) 537
XapI RAATTY 3 cut(s) 265, 574, 752
XceI RCATGY 2 cut(s) 109, 130
XhoI CTCGAG 1 cut(s) 425
XmiI GTMKAC 1 cut(s) 296
Zsp2I ATGCAT 2 cut(s) 132, 842
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.