pycom15g16750

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0013595
Physical Location & Seq
Forward (+)
11752100 .. 11755669
3570 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g16750.1

Sequence Viewer

Length: 2637 bp
ATGGCTTCTCGAATTGTATTCATTTTTATCAAAGGTGTAACGGAGAATAGTGAGAGAAAGATTGCTCATTGCCAAATCATAGAGAAACTACTTAGTCTACAATTCTTCTTGTGGAATCATATAACATCGTACTTTGAAGACATCAACGCCTTGCTTCTTTCGATGTTAAACCACCTTCACCATGCATTAAGGCAGTTTCACCTGGCTCTGCTACTCTCATGCCGCAAATATAATTACAAACCAAATCCCACCCAAACCTTGTATCTCTCTACCACCACAACGCCTTGTACACATGCCTCACCAACTTACCCTCGTTCTGATCTCCTCACGCTCAGCTCCAATGTCCAAACCCTTTGCCAAACCAAGCAAGTTCACGCCTCTGCTCTTCTCAATGGAGTACTGCCCCACAGTGTCTCTCTATGTGCCTCCCTCATGCTCAGATACGCCACTTTCAGATCCCCAGAAACCTTTCACCATCTCTTCCAACAAACCGTCCAGCATTGTCACACTGCTTTCTTGTGGAACACCCTCATACGGGCTTGCTCCATTGCTCAAGTTAATGATAATTTTCAGACTTATAATCAAATGGTTCGGAGCGGTGTTGGACCCGATGACTATACTTTTCCTTTTGTTCTCAAGGCATGTGCAGACCTTTTGGAGGTAAAAAAAGGGATGGAGGTTCATGGGGTTGTTTTTAAAGTGGGATTTGATTATGATGTTTTCGTTGGAAATACCCTTATGTTGTTTTATGGTAATTGTGGGGATCTGAGAGATGCAAAGAGGATATTTAATGAAATGCGTGAAAGGGATGTTGTCTCATGGAATACAGTTATTGGGGTGCTTCCGGTCAATGAGTGCTACATGGAGGCACTTGATTATTATAGAGAGATGAATTCGGCAATTGGGTTTAAGCCAAATGTTGTTACTGTTATCAGTGTGCTGCCAGTTTGTGCAGAGCTCAAAGATGAGTTGATGGCGAGCCAGATTCACAGCTATGTTGTGAAAGTTGGTTTGGACCTTTTGGTGACAACTGGAAATGCATTGGTTGACGTGTATGGGAAATGTGGGAATGTGAAGGCTTCAAAACAAATTTTTGATGAGATAATTCAGAAGAATGAGGTTTCTTGGAATGCATCTATTACCAGTCTCTCTTGCATGGGGCATAATTTGGAAGCCTTAAATACATTTAGGTTGATGATTGATGTAGGGGTTAAACCAAACTCTGTCACCATTTCTAGCATGCTACCAGTGTTAGTTGAATTAGAATTCTTCGGAGTTGGCAAAGAACTCCATGGTTTCAGTGTCAGAACAGGTATTGAAACAGATATCTTCATTGCCAACTCATTAATTGATATGTATGCAAAATCAGGCCGTCCAAATGAGGCATCAAATGTGTTCCAAGAGATGGATAAAAGGAATATTGTTTCTTGGAATGCCATGATTGCTAATTTTTCTCAAAACAGGCTTGAGTTGGAAGCCTTTGGACTTGTGAAGCAAATGCAAGCTCATGATGAAATTCCCAACTCTGTAACCTTCACGAATCTTCTTCCAGCTTGTGCTCGTTTTGGTTCCCGCCGTCTTGGAAAAGAAATCCATGCAATGGCAGTTCGCATGGGATCTGCCTCAGATTTGTTTGTCTCTAATGCTTTGACAGACATGTACGCAAAGTGTGGCTGTCTAAGTCTTGCTCGAAATGTGTTTAACATCTCCGTCAGAGATGAGATTTCTTATAATATACTTATAGTAGGTTATTCTCAAACTACTGATTGCTTAGAATCTCTGAGTTTGTTTTCTGAAATGAAGCTTAAGGGAATGATGCATGACGTTGTTTCCTTTATGGGAGTTATATCAGCTTGCGCAAATCTAACTGCAATCAAGCAGGGCAAAGAGATTCATGGATTTTTAGTAAGAAAGATTTCTGATACTCATCTCTTTGTTGCTAACTCGCTTTTGGATTTTTATACCAAATGTGGGCGAATTGATCTTGCTGCTAAGGTATTCGACTGCATGCCAAAAAAGGATGTAGCTTCATGGAATACAATGATTTTGGGATATGGAATGCTAGGTGAGCTTAACATTGCAATCCGTCTTTTTGAAAAAATGAGGGAAGAAGGTGTAGAATACGATTCAGTTTCATACATTGCAGTTTTGTCATCTTGTAGCCATGGAGGGCTAGTTGAGAAAGGGAAAAAATACTTTGAGGAGATGCGCACACAAAATATTGAGCCAACGGAAAAGCACTATGCTTGCATGGTTGACCTCCTTGGGCGAGCTGGCCTTATGGAAGAAGCAGCAGAACTTATTAAAGGCATGCCAATTGTACCCGATGCCAACATTTGGGGTGCTTTGCTTGGGGCATGCCGAATCCATGGGGATTTAGAGTTGGCAAGTTGGGCAGCAGAGCATCTGTTTGAGTTGAAGCCTGATCATTCTGGGTACTATATACTTCTTTCAAACATGTATGCAGAAGCTGGGAGATGGGAAGAGGTAAACAGGGTGAGGGAACTGATGAAATCAAGGAAAGTGAAGAAGGACTGTGCTATCAGTTGGGTTCAGGTTCGGGACCGGGCGCATGCTTTCATAGTTGGAGATGCAATGGAGACATTAAATTCAGATAGTTGGCTCGCAGAGTCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

879

Amino Acids

98.56

Weight (kDa)

6.29

Isoelectric Point (pI)

38.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 171 - 216 1.2e-06 PPR repeat family
PPR_2 PF13041 372 - 416 6.7e-06 PPR repeat family
PPR_2 PF13041 442 - 474 4.5e-06 PPR repeat family
PPR PF01535 447 - 474 6.2e-06 PPR repeat
PPR_2 PF13041 472 - 521 2.8e-07 PPR repeat family
PPR_2 PF13041 573 - 621 2.4e-06 PPR repeat family
PPR_2 PF13041 673 - 721 6.8e-10 PPR repeat family
PPR PF01535 677 - 706 2.5e-06 PPR repeat
PPR_long PF17177 691 - 838 5.3e-08 Pentacotripeptide-repeat region of PRORP
E_motif PF20431 790 - 852 6.9e-20 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013595)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20891
malus_domestica MD15G1186900.v1.1
prunus_persica Prupe.6G186500_v2.0.a1
pyrus_communis pycom15g16750
rosa_chinensis RchiOBHm_Chr2g0113511
rosa_laevigata RLG00000018071
rosa_multiflora Rmu_sc0000929.1_g000048 Rmu_sc0007415.1_g000023
rosa_roxburghii Rroxscaffold_2G00129180 Rroxscaffold_2G00129970
rosa_rugosa Rorug02G0187900 Rorug02G0188000
rosa_samantha Rh2AG242600 Rh2BG256500 Rh2CG246800 Rh2CG246900 Rh2DG250600
rosa_wichuraiana Rw2G018970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 579, 1731
Acc16I TGCGCA 2 cut(s) 1858, 2210
AccB7I CCANNNNNTGG 3 cut(s) 1405, 1600, 2337
AccBSI CCGCTC 1 cut(s) 597
AccI GTMKAC 1 cut(s) 97
AciI CCGC 3 cut(s) 223, 597, 1573
AclWI GGATC 3 cut(s) 450, 771, 1624
AcsI RAATTY 5 cut(s) 892, 1089, 1265, 1515, 2608
AfaI GTAC 6 cut(s) 131, 289, 399, 1661, 2322, 2438
AfiI CCNNNNNNNGG 7 cut(s) 534, 535, 658, 1405, 1600, 1971, 2337
AflII CTTAAG 1 cut(s) 1805
AflIII ACRYGT 3 cut(s) 1050, 1656, 2457
AgsI TTSAA 7 cut(s) 137, 1083, 1259, 1319, 2096, 2419, 2454
AjiI CACGTC 1 cut(s) 1051
AjnI CCWGG 1 cut(s) 201
AjuI GAANNNNNNNTTGG 2 cut(s) 995, 1027
Alw21I GWGCWC 2 cut(s) 960, 1561
Alw26I GTCTC 5 cut(s) 418, 820, 1151, 1642, 2594
AlwI GGATC 3 cut(s) 450, 771, 1624
AlwNI CAGNNNCTG 1 cut(s) 2471
AoxI GGCC 2 cut(s) 1369, 2275
ApeKI GCWGC 4 cut(s) 940, 1988, 2291, 2396
ApoI RAATTY 5 cut(s) 892, 1089, 1265, 1515, 2608
AseI ATTAAT 1 cut(s) 1346
Asp700I GAANNNNTTC 2 cut(s) 468, 1915
AspLEI GCGC 3 cut(s) 1859, 2211, 2572
AspS9I GGNCC 3 cut(s) 605, 1015, 2563
AsuC2I CCSGG 1 cut(s) 2567
AsuHPI GGTGA 8 cut(s) 170, 191, 291, 464, 1036, 1219, 2078, 2509
AvaII GGWCC 3 cut(s) 605, 1015, 2563
BanII GRGCYC 1 cut(s) 960
BbsI GAAGAC 1 cut(s) 144
Bbv12I GWGCWC 2 cut(s) 960, 1561
BbvI GCAGC 4 cut(s) 927, 1975, 2303, 2408
BccI CCATC 5 cut(s) 483, 667, 967, 1399, 2472
BceAI ACGGC 2 cut(s) 1356, 1560
BciT130I CCWGG 1 cut(s) 203
BclI TGATCA 1 cut(s) 2425
BcnI CCSGG 1 cut(s) 2567
BcoDI GTCTC 5 cut(s) 418, 820, 1151, 1642, 2594
BfaI CTAG 3 cut(s) 1236, 2063, 2174
BfrI CTTAAG 1 cut(s) 1805
BisI GCNGC 5 cut(s) 223, 941, 1989, 2292, 2397
BlpI GCTNAGC 1 cut(s) 332
BlsI GCNGC 5 cut(s) 224, 942, 1990, 2293, 2398
BmcAI AGTACT 1 cut(s) 399
Bme1390I CCNGG 2 cut(s) 203, 2567
Bme18I GGWCC 3 cut(s) 605, 1015, 2563
BmgBI CACGTC 1 cut(s) 1051
BmgT120I GGNCC 3 cut(s) 605, 1015, 2563
BmiI GGNNCC 3 cut(s) 607, 1570, 2564
BmrFI CCNGG 2 cut(s) 203, 2567
BmsI GCATC 8 cut(s) 763, 1142, 1394, 1806, 2196, 2317, 2413, 2581
BpiI GAAGAC 1 cut(s) 144
Bpu10I CCTNAGC 1 cut(s) 1992
Bpu1102I GCTNAGC 1 cut(s) 332
BpuEI CTTGAG 3 cut(s) 537, 620, 1487
BpuMI CCSGG 1 cut(s) 2567
BsaBI GATNNNNATC 1 cut(s) 1926
BsaJI CCNNGG 4 cut(s) 1291, 2164, 2263, 2368
BsaWI WCCGGW 1 cut(s) 844
BsaXI ACNNNNNCTCC 2 cut(s) 2160, 2190
Bsc4I CCNNNNNNNGG 7 cut(s) 534, 535, 658, 1405, 1600, 1971, 2337
Bse1I ACTGG 4 cut(s) 944, 1036, 1143, 1247
Bse3DI GCAATG 7 cut(s) 67, 546, 1332, 1605, 2076, 2139, 2601
Bse8I GATNNNNATC 1 cut(s) 1926
BseBI CCWGG 1 cut(s) 203
BseDI CCNNGG 4 cut(s) 1291, 2164, 2263, 2368
BseGI GGATG 3 cut(s) 678, 814, 2026
BseJI GATNNNNATC 1 cut(s) 1926
BseLI CCNNNNNNNGG 7 cut(s) 534, 535, 658, 1405, 1600, 1971, 2337
BseMI GCAATG 7 cut(s) 67, 546, 1332, 1605, 2076, 2139, 2601
BseMII CTCAG 5 cut(s) 346, 451, 758, 1638, 1772
BseNI ACTGG 4 cut(s) 944, 1036, 1143, 1247
BseRI GAGGAG 2 cut(s) 314, 2216
BseXI GCAGC 4 cut(s) 927, 1975, 2303, 2408
BseYI CCCAGC 1 cut(s) 2471
BsgI GTGCAG 2 cut(s) 666, 972
BshFI GGCC 2 cut(s) 1371, 2277
BsiHKAI GWGCWC 2 cut(s) 960, 1561
BsiSI CCGG 2 cut(s) 845, 2566
BslFI GGGAC 1 cut(s) 2576
BslI CCNNNNNNNGG 7 cut(s) 534, 535, 658, 1405, 1600, 1971, 2337
BsmAI GTCTC 5 cut(s) 418, 820, 1151, 1642, 2594
BsmFI GGGAC 1 cut(s) 2576
BsmI GAATGC 3 cut(s) 1135, 1438, 2064
BsnI GGCC 2 cut(s) 1371, 2277
Bsp1286I GDGCHC 2 cut(s) 960, 1561
Bsp1407I TGTACA 1 cut(s) 287
Bsp143I GATC 6 cut(s) 319, 455, 763, 1616, 1981, 2425
Bsp1720I GCTNAGC 1 cut(s) 332
Bsp19I CCATGG 3 cut(s) 1291, 2164, 2368
BspACI CCGC 3 cut(s) 223, 597, 1573
BspANI GGCC 2 cut(s) 1371, 2277
BspCNI CTCAG 5 cut(s) 345, 450, 759, 1637, 1773
BspHI TCATGA 1 cut(s) 1507
BspLI GGNNCC 3 cut(s) 607, 1570, 2564
BspPI GGATC 3 cut(s) 450, 771, 1624
BspQI GCTCTTC 1 cut(s) 390
BspTI CTTAAG 1 cut(s) 1805
BsrBI CCGCTC 1 cut(s) 597
BsrDI GCAATG 7 cut(s) 67, 546, 1332, 1605, 2076, 2139, 2601
BsrGI TGTACA 1 cut(s) 287
BsrI ACTGG 4 cut(s) 944, 1036, 1143, 1247
BssECI CCNNGG 4 cut(s) 1291, 2164, 2263, 2368
BssMI GATC 6 cut(s) 319, 455, 763, 1616, 1981, 2425
BssT1I CCWWGG 4 cut(s) 1291, 2164, 2263, 2368
Bst2UI CCWGG 1 cut(s) 203
Bst4CI ACNGT 5 cut(s) 410, 493, 829, 928, 2537
Bst6I CTCTTC 3 cut(s) 390, 485, 2478
BstAFI CTTAAG 1 cut(s) 1805
BstAUI TGTACA 1 cut(s) 287
BstDSI CCRYGG 3 cut(s) 1291, 2164, 2368
BstENI CCTNNNNNAGG 1 cut(s) 656
BstF5I GGATG 3 cut(s) 678, 814, 2026
BstHHI GCGC 3 cut(s) 1859, 2211, 2572
BstKTI GATC 6 cut(s) 322, 458, 766, 1619, 1984, 2428
BstMAI GTCTC 5 cut(s) 418, 820, 1151, 1642, 2594
BstMBI GATC 6 cut(s) 319, 455, 763, 1616, 1981, 2425
BstMWI GCNNNNNNNGC 3 cut(s) 1442, 2068, 2393
BstNI CCWGG 1 cut(s) 203
BstNSI RCATGY 9 cut(s) 296, 645, 1243, 1660, 2011, 2314, 2361, 2461, 2576
BstSCI CCNGG 2 cut(s) 201, 2565
BstV1I GCAGC 4 cut(s) 927, 1975, 2303, 2408
BstV2I GAAGAC 1 cut(s) 144
BstX2I RGATCY 3 cut(s) 455, 763, 1616
BstYI RGATCY 3 cut(s) 455, 763, 1616
BsuRI GGCC 2 cut(s) 1371, 2277
BtgI CCRYGG 3 cut(s) 1291, 2164, 2368
BtrI CACGTC 1 cut(s) 1051
BtsCI GGATG 3 cut(s) 678, 814, 2026
BtsI GCAGTG 1 cut(s) 507
BtsIMutI CAGTG 5 cut(s) 415, 507, 940, 1254, 1306
CaiI CAGNNNCTG 1 cut(s) 2471
CciI TCATGA 1 cut(s) 1507
CfoI GCGC 3 cut(s) 1859, 2211, 2572
Cfr13I GGNCC 3 cut(s) 605, 1015, 2563
Csp6I GTAC 6 cut(s) 130, 288, 398, 1660, 2321, 2437
CviQI GTAC 6 cut(s) 130, 288, 398, 1660, 2321, 2437
DpnI GATC 6 cut(s) 321, 457, 765, 1618, 1983, 2427
DpnII GATC 6 cut(s) 319, 455, 763, 1616, 1981, 2425
DraI TTTAAA 1 cut(s) 697
Eam1104I CTCTTC 3 cut(s) 390, 485, 2478
EarI CTCTTC 3 cut(s) 390, 485, 2478
Ecl136II GAGCTC 1 cut(s) 958
Eco130I CCWWGG 4 cut(s) 1291, 2164, 2263, 2368
Eco24I GRGCYC 1 cut(s) 960
Eco32I GATATC 1 cut(s) 1327
Eco47I GGWCC 3 cut(s) 605, 1015, 2563
Eco53kI GAGCTC 1 cut(s) 958
EcoICRI GAGCTC 1 cut(s) 958
EcoNI CCTNNNNNAGG 1 cut(s) 656
EcoRI GAATTC 2 cut(s) 892, 1265
EcoRII CCWGG 1 cut(s) 201
EcoRV GATATC 1 cut(s) 1327
EcoT14I CCWWGG 4 cut(s) 1291, 2164, 2263, 2368
EcoT22I ATGCAT 4 cut(s) 187, 1042, 1135, 1821
EcoT38I GRGCYC 1 cut(s) 960
ErhI CCWWGG 4 cut(s) 1291, 2164, 2263, 2368
FaqI GGGAC 1 cut(s) 2576
FauI CCCGC 1 cut(s) 1580
FbaI TGATCA 1 cut(s) 2425
FblI GTMKAC 1 cut(s) 97
Fnu4HI GCNGC 5 cut(s) 223, 941, 1989, 2292, 2397
FokI GGATG 3 cut(s) 685, 821, 2033
FriOI GRGCYC 1 cut(s) 960
Fsp4HI GCNGC 5 cut(s) 223, 941, 1989, 2292, 2397
FspAI RTGCGCAY 1 cut(s) 2210
FspBI CTAG 3 cut(s) 1236, 2063, 2174
FspI TGCGCA 2 cut(s) 1858, 2210
GlaI GCGC 3 cut(s) 1858, 2210, 2571
GluI GCNGC 5 cut(s) 223, 941, 1989, 2292, 2397
GsaI CCCAGC 1 cut(s) 2475
HaeIII GGCC 2 cut(s) 1371, 2277
HapII CCGG 2 cut(s) 845, 2566
HhaI GCGC 3 cut(s) 1859, 2211, 2572
Hin6I GCGC 3 cut(s) 1857, 2209, 2570
HinP1I GCGC 3 cut(s) 1857, 2209, 2570
HincII GTYRAC 2 cut(s) 1048, 2257
HindII GTYRAC 2 cut(s) 1048, 2257
HindIII AAGCTT 1 cut(s) 1802
HinfI GANTC 8 cut(s) 115, 985, 1540, 1775, 1891, 2126, 2364, 2630
HpaII CCGG 2 cut(s) 845, 2566
HphI GGTGA 8 cut(s) 170, 191, 291, 464, 1036, 1219, 2078, 2509
Hpy166II GTNNAC 6 cut(s) 98, 290, 373, 1048, 2257, 2491
Hpy188III TCNNGA 4 cut(s) 9, 1508, 1537, 2561
Hpy8I GTNNAC 6 cut(s) 98, 290, 373, 1048, 2257, 2491
HpyAV CCTTC 5 cut(s) 185, 1069, 1543, 2105, 2524
HpyCH4III ACNGT 5 cut(s) 410, 493, 829, 928, 2537
HpyCH4IV ACGT 2 cut(s) 1050, 1824
HpyF10VI GCNNNNNNNGC 3 cut(s) 1442, 2068, 2393
HpySE526I ACGT 2 cut(s) 1050, 1824
HspAI GCGC 3 cut(s) 1857, 2209, 2570
Ksp22I TGATCA 1 cut(s) 2425
Kzo9I GATC 6 cut(s) 319, 455, 763, 1616, 1981, 2425
LguI GCTCTTC 1 cut(s) 390
LmnI GCTCC 3 cut(s) 341, 548, 594
Lsp1109I GCAGC 4 cut(s) 927, 1975, 2303, 2408
LweI GCATC 8 cut(s) 763, 1142, 1394, 1806, 2196, 2317, 2413, 2581
MaeI CTAG 3 cut(s) 1236, 2063, 2174
MaeII ACGT 2 cut(s) 1050, 1824
MaeIII GTNAC 6 cut(s) 37, 503, 922, 1024, 1225, 1528
MalI GATC 6 cut(s) 321, 457, 765, 1618, 1983, 2427
MbiI CCGCTC 1 cut(s) 597
MboI GATC 6 cut(s) 319, 455, 763, 1616, 1981, 2425
MfeI CAATTG 2 cut(s) 900, 2316
MflI RGATCY 3 cut(s) 455, 763, 1616
MhlI GDGCHC 2 cut(s) 960, 1561
MmeI TCCRAC 5 cut(s) 508, 583, 706, 1452, 2566
Mph1103I ATGCAT 4 cut(s) 187, 1042, 1135, 1821
MroXI GAANNNNTTC 2 cut(s) 468, 1915
MslI CAYNNNNRTG 1 cut(s) 993
MspCI CTTAAG 1 cut(s) 1805
MspI CCGG 2 cut(s) 845, 2566
MspR9I CCNGG 2 cut(s) 203, 2567
MunI CAATTG 2 cut(s) 900, 2316
Mva1269I GAATGC 3 cut(s) 1135, 1438, 2064
MvaI CCWGG 1 cut(s) 203
MwoI GCNNNNNNNGC 3 cut(s) 1442, 2068, 2393
NciI CCSGG 1 cut(s) 2567
NcoI CCATGG 3 cut(s) 1291, 2164, 2368
NdeII GATC 6 cut(s) 319, 455, 763, 1616, 1981, 2425
NlaIV GGNNCC 3 cut(s) 607, 1570, 2564
NmuCI GTSAC 3 cut(s) 503, 1024, 1225
NsbI TGCGCA 2 cut(s) 1858, 2210
NsiI ATGCAT 4 cut(s) 187, 1042, 1135, 1821
NspI RCATGY 9 cut(s) 296, 645, 1243, 1660, 2011, 2314, 2361, 2461, 2576
PaeI GCATGC 5 cut(s) 1243, 2011, 2314, 2361, 2576
PagI TCATGA 1 cut(s) 1507
PciI ACATGT 2 cut(s) 1656, 2457
PciSI GCTCTTC 1 cut(s) 390
PctI GAATGC 3 cut(s) 1135, 1438, 2064
PdmI GAANNNNTTC 2 cut(s) 468, 1915
PfeI GAWTC 7 cut(s) 115, 985, 1540, 1775, 1891, 2126, 2364
PflMI CCANNNNNTGG 3 cut(s) 1405, 1600, 2337
PkrI GCNGC 5 cut(s) 224, 942, 1990, 2293, 2398
PscI ACATGT 2 cut(s) 1656, 2457
PshBI ATTAAT 1 cut(s) 1346
PsiI TTATAA 2 cut(s) 579, 1731
Psp124BI GAGCTC 1 cut(s) 960
Psp6I CCWGG 1 cut(s) 201
PspFI CCCAGC 1 cut(s) 2471
PspGI CCWGG 1 cut(s) 201
PspN4I GGNNCC 3 cut(s) 607, 1570, 2564
PspPI GGNCC 3 cut(s) 605, 1015, 2563
PstNI CAGNNNCTG 1 cut(s) 2471
PsuI RGATCY 3 cut(s) 455, 763, 1616
RsaI GTAC 6 cut(s) 131, 289, 399, 1661, 2322, 2438
RsaNI GTAC 6 cut(s) 130, 288, 398, 1660, 2321, 2437
RseI CAYNNNNRTG 1 cut(s) 993
SacI GAGCTC 1 cut(s) 960
SapI GCTCTTC 1 cut(s) 390
SatI GCNGC 5 cut(s) 223, 941, 1989, 2292, 2397
Sau3AI GATC 6 cut(s) 319, 455, 763, 1616, 1981, 2425
Sau96I GGNCC 3 cut(s) 605, 1015, 2563
ScaI AGTACT 1 cut(s) 399
ScrFI CCNGG 2 cut(s) 203, 2567
SduI GDGCHC 2 cut(s) 960, 1561
SfaNI GCATC 8 cut(s) 763, 1142, 1394, 1806, 2196, 2317, 2413, 2581
SinI GGWCC 3 cut(s) 605, 1015, 2563
SmiMI CAYNNNNRTG 1 cut(s) 993
SmlI CTYRAG 4 cut(s) 552, 635, 1466, 1805
SmoI CTYRAG 4 cut(s) 552, 635, 1466, 1805
SphI GCATGC 5 cut(s) 1243, 2011, 2314, 2361, 2576
SsiI CCGC 3 cut(s) 223, 597, 1573
SspI AATATT 2 cut(s) 1420, 2221
SspMI CTAG 3 cut(s) 1236, 2063, 2174
SstI GAGCTC 1 cut(s) 960
StyD4I CCNGG 2 cut(s) 201, 2565
StyI CCWWGG 4 cut(s) 1291, 2164, 2263, 2368
TaaI ACNGT 5 cut(s) 410, 493, 829, 928, 2537
TaiI ACGT 2 cut(s) 1053, 1827
TaqI TCGA 4 cut(s) 10, 161, 1690, 2001
TatI WGTACW 2 cut(s) 287, 397
TauI GCSGC 1 cut(s) 225
TfiI GAWTC 7 cut(s) 115, 985, 1540, 1775, 1891, 2126, 2364
TscAI CASTG 5 cut(s) 415, 514, 940, 1254, 1306
TseFI GTSAC 3 cut(s) 503, 1024, 1225
TseI GCWGC 4 cut(s) 940, 1988, 2291, 2396
Tsp45I GTSAC 3 cut(s) 503, 1024, 1225
TspGWI ACGGA 4 cut(s) 56, 1699, 2075, 2246
TspRI CASTG 5 cut(s) 415, 514, 940, 1254, 1306
Van91I CCANNNNNTGG 3 cut(s) 1405, 1600, 2337
Vha464I CTTAAG 1 cut(s) 1805
VpaK11BI GGWCC 3 cut(s) 605, 1015, 2563
VspI ATTAAT 1 cut(s) 1346
XagI CCTNNNNNAGG 1 cut(s) 656
XapI RAATTY 5 cut(s) 892, 1089, 1265, 1515, 2608
XceI RCATGY 9 cut(s) 296, 645, 1243, 1660, 2011, 2314, 2361, 2461, 2576
XmiI GTMKAC 1 cut(s) 97
XmnI GAANNNNTTC 2 cut(s) 468, 1915
XspI CTAG 3 cut(s) 1236, 2063, 2174
ZrmI AGTACT 1 cut(s) 399
Zsp2I ATGCAT 4 cut(s) 187, 1042, 1135, 1821
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.