RchiOBHm_Chr2g0113511

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0013595
Physical Location & Seq
Forward (+)
25628203 .. 25630723
2521 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48686

Sequence Viewer

Length: 2436 bp
ATGTTAAACCACCACCGCAATGCCCTCAGACACTTCCACCCGCCGCCGCTATTCTCAATCTCCACCCTCTCTCTTTCCACCACCACCACAAAACCAACCCCAACTCACCCTCACTCCAATCTCCTCACACTCACCTCCAACGCCCAAACCCTCCACCAAACCAAGCAACTCCACGCTCTCTCTCTCCTCCACGCCCTACTCCCCCACAGCGTCTCCCTCTGCGCCTCCCTCATGCTCACCTACGCCACCTTCAACTCCCCCGACGCCTCTCGCCGCCTCTTTAATCAAACCGTTAAGTATTGCCGCACCGCTTTCTTGTGGAACACGCTCATAAGAGCCTGCTCCATTGCTCAGGTGGACGATCGGTTTCGGACTTACAATCAAATGGTTCGGAGCGGCGTGCAGCTCGATGATCACAGCTTTCCTTTCGTCATCAAGGCCTGTTCGGACTCTACGGAGGTGAAGAAGGGGATGGAGGTTCATGGGGTGGTGGTTAAACTAGGGTTTGATTCGGATGTTTACGTGGGGAACACGCTTCTTTCGTTTTATGGCAACTGTGGGAAACTAAGGGATGCACGGAAGGTGTTTGATGAAATGACTGAGAGAGATGTTGTGTCGTGGAATACGATTATCGGGGTGTTTTCGGTGAATGGGGGTTACGTTGATGCACTGCATTGTTATAGGGAGATGAATTTGGGAATTGGGTGTAGGCCGAATGTTGTGAGTGTTATTAGTGCATTGCCGGTTTGCGCAGAGCTTGCGGATGAGGTGATGGCGGTTCAGATACATTGCTATGTTGTGAAGTCTGGTTTGGGTACGCAGGTGACTATTGGGAATGCATTGGTTGATGTGTATGGGAAGTGTTGGAATGTGAAGGCGTCGAAACAGGTTTTTGATGAGATGAGTCAGCGGAATGAGGTTTCTTGGAATGCAGCTATTACTAGTCTTGCTTATGTGGGGAATAACAGGGAAGCATTGGATACATTTAGGTTGATGATTGATGTAGGGGTTAAACCAAACTCTGTCACCATTTCCAGCATGCTACCAGTTTTGGTTGAACTTGACTTATTTGGAGTTGGTAAAGAGCTCCATGGTTTCTGTATAAGAATGGGTATTGAATCAGACGTTTTTATTGGCAACTCATTAATTGATATGTATGCAAAATCAGGCCATTCACATGAGGCGTCCAATGTGTTCCGAGAGATGGATGAAAGGAATATTGTTTCTTGGAATGCCATGATTGCTAATTTTGCTCAAAACAGGCTTGAGTTGGAAGCAATTGGACTTCTGAGACAAATGCAAGCTCATGGTGAAATTCCCAATTCTGTCACCATCACAAATCTTCTTCCAGCTTGTGCACGGTTGGGTTCCCTTCGCCTTGGGAAAGAAATTCATGCAAGGACAATTCGCATGGGATCTGCCTCTGATTTGTTTGTCTCTAATGCTCTCACAGACATGTACGCAAAATGTGGCTGGCTAGATCTTGCTCGAAATGTCTTTAACATATCCCTTAGAGACGAGGTGTCCTACAACACACTGATAATAGGTTATTCTCAGACCACAGATTGCTCTGAATCTCTAAGTTTGTTTTCTGAAATGAAGCTGGTGGGCATGATGCATGACATTGTTTCATTTGTGGGAGTTATATCAGCTTGCGCAAATCTAACTGCAGTCAAGCAAGGCAAAGAGATTCATGGATCTGTAATAAGAAAGCTTTTTGACTCTCATCTCTTTGTTGCAAACTCACTTCTGGATTTCTATACCAAATCTGGCCGAATTGATCTTGCTACTAAGGTCTTTGACCACATTTCCAACAAGGATGTAGCCTCTTGGAATACTATGATTTTGGGATATGGAATGCTAGGTGAGCTTGACACTGCAATCAGTTTCTTTGAAGCAATGAGGGAAGATGGTGTAGATTATGATTCTGTTTCATACATTGCAGTTTTGTCATCTTGTAGTCATGGGGGGTTAGTTGAGAAGGGCAAAAGATACTTTGAGGGGATGCTGGCACGAAATATTGAGCCTACACAAAAGCACTATGCGTGCATGGTTGATCTCCTTGGCCGAGCTGGCCTCATGGAAGAAGCAGTAGAACTTATTAAAGGCATGCCAATTGTACCAGATGCCAACATTTGGGGTTCTTTACTTGGAGCATGTCGAATCCATGGGAACATAGAGTTGGCGAGTTGGGCAGCAGAGTATCTATTTAAGTTAAAACCTGACCATTGTGGGTACTATATACTGCTTTCTAACATGTATGCAGAAGCAAGTAGATGGGAAGATGTAAAGAGGGTGAGGGAATTGATGAAGTCAAGGGGCTTGAAGAAAAATCCTGCTTACAGTTGGGTTCAGATTCGAGACGAGGTGCATGCTTTCGGAGTTGGAGAGAGACTGGAGAGACTGAATTCAGATTGCTGGCTGGCAGAATCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

811

Amino Acids

90.24

Weight (kDa)

6.48

Isoelectric Point (pI)

33.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 305 - 349 1.9e-07 PPR repeat family
PPR_2 PF13041 405 - 454 4.3e-07 PPR repeat family
PPR_2 PF13041 506 - 554 2.5e-06 PPR repeat family
PPR_2 PF13041 606 - 654 1.9e-08 PPR repeat family
PPR PF01535 610 - 639 3e-06 PPR repeat
E_motif PF20431 723 - 785 6.9e-19 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013595)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20891
malus_domestica MD15G1186900.v1.1
prunus_persica Prupe.6G186500_v2.0.a1
pyrus_communis pycom15g16750
rosa_chinensis RchiOBHm_Chr2g0113511
rosa_laevigata RLG00000018071
rosa_multiflora Rmu_sc0000929.1_g000048 Rmu_sc0007415.1_g000023
rosa_roxburghii Rroxscaffold_2G00129180 Rroxscaffold_2G00129970
rosa_rugosa Rorug02G0187900 Rorug02G0188000
rosa_samantha Rh2AG242600 Rh2BG256500 Rh2CG246800 Rh2CG246900 Rh2DG250600
rosa_wichuraiana Rw2G018970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 811
Acc16I TGCGCA 2 cut(s) 751, 1657
Acc36I ACCTGC 1 cut(s) 811
AccB7I CCANNNNNTGG 1 cut(s) 2136
AccBSI CCGCTC 1 cut(s) 396
AclWI GGATC 2 cut(s) 1423, 1705
AcoI YGGCCR 2 cut(s) 1771, 2065
AcsI RAATTY 4 cut(s) 691, 1314, 1389, 2407
AcyI GRCGYC 3 cut(s) 264, 878, 1184
AfaI GTAC 4 cut(s) 817, 1460, 2121, 2237
AfiI CCNNNNNNNGG 2 cut(s) 1204, 2136
AflIII ACRYGT 2 cut(s) 1455, 2256
AgsI TTSAA 5 cut(s) 253, 1058, 1118, 1895, 2326
AhdI GACNNNNNGTC 1 cut(s) 1522
AhlI ACTAGT 1 cut(s) 941
AjuI GAANNNNNNNTTGG 4 cut(s) 794, 826, 2165, 2197
Alw21I GWGCWC 2 cut(s) 1089, 1360
Alw26I GTCTC 7 cut(s) 217, 1285, 1441, 1509, 2355, 2386, 2395
Alw44I GTGCAC 1 cut(s) 1356
AlwI GGATC 2 cut(s) 1423, 1705
AoxI GGCC 6 cut(s) 438, 710, 1168, 1771, 2065, 2074
ApaLI GTGCAC 1 cut(s) 1356
ApeKI GCWGC 3 cut(s) 403, 932, 2195
ApoI RAATTY 4 cut(s) 691, 1314, 1389, 2407
AseI ATTAAT 1 cut(s) 1145
AspLEI GCGC 3 cut(s) 224, 752, 1658
BaeGI GKGCMC 1 cut(s) 1360
BaeI ACNNNNGTAYC 2 cut(s) 807, 840
BanII GRGCYC 1 cut(s) 1089
Bbv12I GWGCWC 2 cut(s) 1089, 1360
BbvI GCAGC 3 cut(s) 415, 944, 2207
BccI CCATC 6 cut(s) 466, 766, 1198, 1340, 1904, 2271
BcgI CGANNNNNNTGC 2 cut(s) 2354, 2388
BciVI GTATCC 1 cut(s) 973
BclI TGATCA 1 cut(s) 412
BcoDI GTCTC 7 cut(s) 217, 1285, 1441, 1509, 2355, 2386, 2395
BcuI ACTAGT 1 cut(s) 941
BfaI CTAG 4 cut(s) 500, 942, 1478, 1862
BfmI CTRYAG 1 cut(s) 1668
BfuAI ACCTGC 1 cut(s) 811
BfuI GTATCC 1 cut(s) 973
BglI GCCNNNNNGGC 1 cut(s) 2073
BglII AGATCT 1 cut(s) 1480
BisI GCNGC 8 cut(s) 44, 47, 274, 304, 397, 404, 933, 2196
BlsI GCNGC 8 cut(s) 45, 48, 275, 305, 398, 405, 934, 2197
BmeRI GACNNNNNGTC 1 cut(s) 1522
BmiI GGNNCC 1 cut(s) 1369
BmsI GCATC 5 cut(s) 562, 655, 1605, 1995, 2116
BplI GAGNNNNNCTC 2 cut(s) 2061, 2093
BpmI CTGGAG 1 cut(s) 2417
Bpu10I CCTNAGC 1 cut(s) 351
BpuEI CTTGAG 1 cut(s) 1286
BsaAI YACGTR 1 cut(s) 523
BsaHI GRCGYC 3 cut(s) 264, 878, 1184
BsaJI CCNNGG 4 cut(s) 1090, 1378, 2062, 2167
BsaXI ACNNNNNCTCC 4 cut(s) 98, 128, 197, 227
Bsc4I CCNNNNNNNGG 2 cut(s) 1204, 2136
Bse118I RCCGGY 1 cut(s) 742
Bse1I ACTGG 2 cut(s) 1046, 2400
Bse3DI GCAATG 6 cut(s) 25, 345, 737, 787, 1905, 1938
BseDI CCNNGG 4 cut(s) 1090, 1378, 2062, 2167
BseGI GGATG 7 cut(s) 477, 520, 577, 769, 1213, 1825, 2010
BseLI CCNNNNNNNGG 2 cut(s) 1204, 2136
BseMI GCAATG 6 cut(s) 25, 345, 737, 787, 1905, 1938
BseMII CTCAG 5 cut(s) 40, 365, 591, 1280, 1568
BseNI ACTGG 2 cut(s) 1046, 2400
BseRI GAGGAG 2 cut(s) 113, 176
BseSI GKGCMC 1 cut(s) 1360
BseXI GCAGC 3 cut(s) 415, 944, 2207
BsgI GTGCAG 1 cut(s) 422
Bsh1285I CGRYCG 1 cut(s) 364
BshFI GGCC 6 cut(s) 440, 712, 1170, 1773, 2067, 2076
BsiEI CGRYCG 1 cut(s) 364
BsiHKAI GWGCWC 2 cut(s) 1089, 1360
BsiSI CCGG 1 cut(s) 743
BslI CCNNNNNNNGG 2 cut(s) 1204, 2136
BsmAI GTCTC 7 cut(s) 217, 1285, 1441, 1509, 2355, 2386, 2395
BsmBI CGTCTC 3 cut(s) 217, 1509, 2355
BsmI GAATGC 4 cut(s) 841, 934, 1237, 1863
BsnI GGCC 6 cut(s) 440, 712, 1170, 1773, 2067, 2076
Bsp1286I GDGCHC 2 cut(s) 1089, 1360
Bsp143I GATC 7 cut(s) 361, 412, 1415, 1480, 1697, 1780, 2056
Bsp19I CCATGG 2 cut(s) 1090, 2167
BspANI GGCC 6 cut(s) 440, 712, 1170, 1773, 2067, 2076
BspCNI CTCAG 5 cut(s) 39, 364, 592, 1281, 1567
BspLI GGNNCC 1 cut(s) 1369
BspMAI CTGCAG 1 cut(s) 1672
BspMI ACCTGC 1 cut(s) 811
BspPI GGATC 2 cut(s) 1423, 1705
BsrBI CCGCTC 1 cut(s) 396
BsrDI GCAATG 6 cut(s) 25, 345, 737, 787, 1905, 1938
BsrFI RCCGGY 1 cut(s) 742
BsrI ACTGG 2 cut(s) 1046, 2400
BssAI RCCGGY 1 cut(s) 742
BssECI CCNNGG 4 cut(s) 1090, 1378, 2062, 2167
BssMI GATC 7 cut(s) 361, 412, 1415, 1480, 1697, 1780, 2056
BssNI GRCGYC 3 cut(s) 264, 878, 1184
BssT1I CCWWGG 4 cut(s) 1090, 1378, 2062, 2167
Bst4CI ACNGT 4 cut(s) 292, 557, 1362, 2345
BstACI GRCGYC 3 cut(s) 264, 878, 1184
BstAPI GCANNNNNTGC 1 cut(s) 758
BstBAI YACGTR 1 cut(s) 523
BstDEI CTNAG 9 cut(s) 26, 351, 566, 600, 1289, 1511, 1554, 1580, 1791
BstDSI CCRYGG 2 cut(s) 1090, 2167
BstF5I GGATG 7 cut(s) 477, 520, 577, 769, 1213, 1825, 2010
BstHHI GCGC 3 cut(s) 224, 752, 1658
BstKTI GATC 7 cut(s) 364, 415, 1418, 1483, 1700, 1783, 2059
BstMAI GTCTC 7 cut(s) 217, 1285, 1441, 1509, 2355, 2386, 2395
BstMBI GATC 7 cut(s) 361, 412, 1415, 1480, 1697, 1780, 2056
BstMCI CGRYCG 1 cut(s) 364
BstMWI GCNNNNNNNGC 6 cut(s) 758, 1241, 1250, 1867, 2073, 2192
BstNSI RCATGY 6 cut(s) 1042, 1459, 2113, 2160, 2260, 2375
BstSFI CTRYAG 1 cut(s) 1668
BstSLI GKGCMC 1 cut(s) 1360
BstV1I GCAGC 3 cut(s) 415, 944, 2207
BstX2I RGATCY 3 cut(s) 1415, 1480, 1697
BstYI RGATCY 3 cut(s) 1415, 1480, 1697
BsuI GTATCC 1 cut(s) 973
BsuRI GGCC 6 cut(s) 440, 712, 1170, 1773, 2067, 2076
BtgI CCRYGG 2 cut(s) 1090, 2167
BtsCI GGATG 7 cut(s) 477, 520, 577, 769, 1213, 1825, 2010
BtsI GCAGTG 2 cut(s) 668, 1875
BtsIMutI CAGTG 3 cut(s) 668, 1535, 1875
BveI ACCTGC 1 cut(s) 811
CfoI GCGC 3 cut(s) 224, 752, 1658
Cfr10I RCCGGY 1 cut(s) 742
CseI GACGC 4 cut(s) 199, 272, 867, 1173
Csp6I GTAC 4 cut(s) 816, 1459, 2120, 2236
CviQI GTAC 4 cut(s) 816, 1459, 2120, 2236
DdeI CTNAG 9 cut(s) 26, 351, 566, 600, 1289, 1511, 1554, 1580, 1791
DpnI GATC 7 cut(s) 363, 414, 1417, 1482, 1699, 1782, 2058
DpnII GATC 7 cut(s) 361, 412, 1415, 1480, 1697, 1780, 2056
DriI GACNNNNNGTC 1 cut(s) 1522
EaeI YGGCCR 2 cut(s) 1771, 2065
Eam1105I GACNNNNNGTC 1 cut(s) 1522
Ecl136II GAGCTC 1 cut(s) 1087
Eco130I CCWWGG 4 cut(s) 1090, 1378, 2062, 2167
Eco147I AGGCCT 1 cut(s) 440
Eco24I GRGCYC 1 cut(s) 1089
Eco53kI GAGCTC 1 cut(s) 1087
EcoICRI GAGCTC 1 cut(s) 1087
EcoRI GAATTC 1 cut(s) 2407
EcoT14I CCWWGG 4 cut(s) 1090, 1378, 2062, 2167
EcoT22I ATGCAT 2 cut(s) 841, 1620
EcoT38I GRGCYC 1 cut(s) 1089
ErhI CCWWGG 4 cut(s) 1090, 1378, 2062, 2167
Esp3I CGTCTC 3 cut(s) 217, 1509, 2355
FauI CCCGC 1 cut(s) 48
FbaI TGATCA 1 cut(s) 412
Fnu4HI GCNGC 8 cut(s) 44, 47, 274, 304, 397, 404, 933, 2196
FokI GGATG 7 cut(s) 484, 527, 584, 776, 1220, 1832, 2017
FriOI GRGCYC 1 cut(s) 1089
Fsp4HI GCNGC 8 cut(s) 44, 47, 274, 304, 397, 404, 933, 2196
FspBI CTAG 4 cut(s) 500, 942, 1478, 1862
FspI TGCGCA 2 cut(s) 751, 1657
GlaI GCGC 3 cut(s) 223, 751, 1657
GluI GCNGC 8 cut(s) 44, 47, 274, 304, 397, 404, 933, 2196
GsuI CTGGAG 1 cut(s) 2417
HaeIII GGCC 6 cut(s) 440, 712, 1170, 1773, 2067, 2076
HapII CCGG 1 cut(s) 743
HgaI GACGC 4 cut(s) 199, 272, 867, 1173
HhaI GCGC 3 cut(s) 224, 752, 1658
Hin1I GRCGYC 3 cut(s) 264, 878, 1184
Hin6I GCGC 3 cut(s) 222, 750, 1656
HinP1I GCGC 3 cut(s) 222, 750, 1656
HindIII AAGCTT 1 cut(s) 1712
HpaII CCGG 1 cut(s) 743
Hpy166II GTNNAC 3 cut(s) 358, 520, 1358
Hpy188III TCNNGA 2 cut(s) 1751, 2360
Hpy8I GTNNAC 3 cut(s) 358, 520, 1358
Hpy99I CGWCG 2 cut(s) 266, 883
HpyAV CCTTC 6 cut(s) 259, 460, 574, 868, 1382, 1975
HpyCH4III ACNGT 4 cut(s) 292, 557, 1362, 2345
HpyCH4IV ACGT 3 cut(s) 522, 660, 1125
HpyF10VI GCNNNNNNNGC 6 cut(s) 758, 1241, 1250, 1867, 2073, 2192
HpyF3I CTNAG 9 cut(s) 26, 351, 566, 600, 1289, 1511, 1554, 1580, 1791
HpySE526I ACGT 3 cut(s) 522, 660, 1125
Hsp92I GRCGYC 3 cut(s) 264, 878, 1184
HspAI GCGC 3 cut(s) 222, 750, 1656
Ksp22I TGATCA 1 cut(s) 412
Kzo9I GATC 7 cut(s) 361, 412, 1415, 1480, 1697, 1780, 2056
LmnI GCTCC 4 cut(s) 347, 393, 1092, 2153
Lsp1109I GCAGC 3 cut(s) 415, 944, 2207
LweI GCATC 5 cut(s) 562, 655, 1605, 1995, 2116
MaeI CTAG 4 cut(s) 500, 942, 1478, 1862
MaeII ACGT 3 cut(s) 522, 660, 1125
MaeIII GTNAC 4 cut(s) 656, 823, 1024, 1327
MalI GATC 7 cut(s) 363, 414, 1417, 1482, 1699, 1782, 2058
MbiI CCGCTC 1 cut(s) 396
MboI GATC 7 cut(s) 361, 412, 1415, 1480, 1697, 1780, 2056
MboII GAAGA 7 cut(s) 475, 1334, 1337, 1919, 2096, 2294, 2338
MfeI CAATTG 2 cut(s) 1278, 2115
MflI RGATCY 3 cut(s) 1415, 1480, 1697
MhlI GDGCHC 2 cut(s) 1089, 1360
MlyI GAGTC 3 cut(s) 443, 913, 1715
MmeI TCCRAC 5 cut(s) 162, 845, 1251, 1836, 2365
Mph1103I ATGCAT 2 cut(s) 841, 1620
MslI CAYNNNNRTG 4 cut(s) 18, 792, 1176, 1454
MspA1I CMGCKG 1 cut(s) 910
MspI CCGG 1 cut(s) 743
MunI CAATTG 2 cut(s) 1278, 2115
Mva1269I GAATGC 4 cut(s) 841, 934, 1237, 1863
MwoI GCNNNNNNNGC 6 cut(s) 758, 1241, 1250, 1867, 2073, 2192
NcoI CCATGG 2 cut(s) 1090, 2167
NdeII GATC 7 cut(s) 361, 412, 1415, 1480, 1697, 1780, 2056
NlaIV GGNNCC 1 cut(s) 1369
NmeAIII GCCGAG 1 cut(s) 2093
NmuCI GTSAC 3 cut(s) 823, 1024, 1327
NsbI TGCGCA 2 cut(s) 751, 1657
NsiI ATGCAT 2 cut(s) 841, 1620
NspI RCATGY 6 cut(s) 1042, 1459, 2113, 2160, 2260, 2375
PaeI GCATGC 3 cut(s) 1042, 2113, 2375
PaqCI CACCTGC 1 cut(s) 811
PceI AGGCCT 1 cut(s) 440
PciI ACATGT 2 cut(s) 1455, 2256
PcsI WCGNNNNNNNCGW 2 cut(s) 539, 623
PctI GAATGC 4 cut(s) 841, 934, 1237, 1863
PfeI GAWTC 8 cut(s) 509, 1118, 1574, 1690, 1925, 2163, 2356, 2429
PflMI CCANNNNNTGG 1 cut(s) 2136
PkrI GCNGC 8 cut(s) 45, 48, 275, 305, 398, 405, 934, 2197
Ple19I CGATCG 1 cut(s) 364
PleI GAGTC 3 cut(s) 443, 912, 1715
PpsI GAGTC 3 cut(s) 443, 912, 1715
Ppu21I YACGTR 1 cut(s) 523
PscI ACATGT 2 cut(s) 1455, 2256
PshBI ATTAAT 1 cut(s) 1145
Psp124BI GAGCTC 1 cut(s) 1089
PspN4I GGNNCC 1 cut(s) 1369
PstI CTGCAG 1 cut(s) 1672
PsuI RGATCY 3 cut(s) 1415, 1480, 1697
PvuI CGATCG 1 cut(s) 364
RsaI GTAC 4 cut(s) 817, 1460, 2121, 2237
RsaNI GTAC 4 cut(s) 816, 1459, 2120, 2236
RseI CAYNNNNRTG 4 cut(s) 18, 792, 1176, 1454
SacI GAGCTC 1 cut(s) 1089
SatI GCNGC 8 cut(s) 44, 47, 274, 304, 397, 404, 933, 2196
Sau3AI GATC 7 cut(s) 361, 412, 1415, 1480, 1697, 1780, 2056
SchI GAGTC 3 cut(s) 443, 913, 1715
SduI GDGCHC 2 cut(s) 1089, 1360
SfaNI GCATC 5 cut(s) 562, 655, 1605, 1995, 2116
SfcI CTRYAG 1 cut(s) 1668
SfiI GGCCNNNNNGGCC 1 cut(s) 2073
SmiMI CAYNNNNRTG 4 cut(s) 18, 792, 1176, 1454
SmlI CTYRAG 1 cut(s) 1265
SmoI CTYRAG 1 cut(s) 1265
SpeI ACTAGT 1 cut(s) 941
SphI GCATGC 3 cut(s) 1042, 2113, 2375
SseBI AGGCCT 1 cut(s) 440
SspI AATATT 2 cut(s) 1219, 2020
SspMI CTAG 4 cut(s) 500, 942, 1478, 1862
SstI GAGCTC 1 cut(s) 1089
StuI AGGCCT 1 cut(s) 440
StyI CCWWGG 4 cut(s) 1090, 1378, 2062, 2167
TaaI ACNGT 4 cut(s) 292, 557, 1362, 2345
TaiI ACGT 3 cut(s) 525, 663, 1128
TaqI TCGA 5 cut(s) 408, 881, 1489, 2161, 2359
TauI GCSGC 5 cut(s) 46, 49, 276, 306, 399
TfiI GAWTC 8 cut(s) 509, 1118, 1574, 1690, 1925, 2163, 2356, 2429
TscAI CASTG 3 cut(s) 675, 1542, 1882
TseFI GTSAC 3 cut(s) 823, 1024, 1327
TseI GCWGC 3 cut(s) 403, 932, 2195
Tsp45I GTSAC 3 cut(s) 823, 1024, 1327
TspGWI ACGGA 2 cut(s) 470, 592
TspRI CASTG 3 cut(s) 675, 1542, 1882
Van91I CCANNNNNTGG 1 cut(s) 2136
VneI GTGCAC 1 cut(s) 1356
VspI ATTAAT 1 cut(s) 1145
XapI RAATTY 4 cut(s) 691, 1314, 1389, 2407
XceI RCATGY 6 cut(s) 1042, 1459, 2113, 2160, 2260, 2375
XcmI CCANNNNNNNNNTGG 1 cut(s) 352
XspI CTAG 4 cut(s) 500, 942, 1478, 1862
Zsp2I ATGCAT 2 cut(s) 841, 1620
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.