Rh2CG246900

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0013595
Physical Location & Seq
Forward (+)
25876592 .. 25879027
2436 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG246900.1

Sequence Viewer

Length: 2436 bp
ATGTTAAACCACCACCGCAATGTCCTCAGACACTTCCACCCGCCGCCGCTGTTCTCAATCTCCTCCCTCTCTCTTTCCACCACCACCACAAAACCAACCCCAACTCACCCTCACTCCAATCTCCTCACACTCACCTCCAACGCCCAAACCCTCCGCCAAACCAAGCAACTCCACGCTCTCTCACTCCTCCACGCCCTACTCCCCCACAGCGTCTCCCTCTGCGCCTCCCTCATGCTCACCTACGCCACCTTCAACTCCCCCGACGCCTCTCTCCGCCTCTTTAATCAAACCGTTAAGTATTGCCGGACCGCTTTCTTGTGGAACACGCTCATAAGAGCCTGCTCCATTGCTCAGGTGGACGATCGGTTTCGGACTTACAATCAAATGGTTCGGAGCGGCGTGCAGCTCGATGATCACAGCTTTCCTTTCGTCATCAAGGCCTGTTCGGACTCTACGGAGGTGAAGAAGGGGATGGAGGTTCATGGGGTGGTGGTTAAACTAGGGTTTGATTCGGATGTTTACGTGGGGAACACGCTTCTTTCGTTTTATGGTAACTGCGGGAAACTAAGGGATGCACGGAAGGTGTTTGATGAAATGACTGAGAGAGATGTTGTGTCGTGGAATACAATTATTGGGGTGTTTTCGGTGAATGGTGGTTACGTTGAGGCACTGCATTGTTATAGGGAGATGAATTTGGGAATTGGGTGTAGGCCGAATGTTGTGAGTGTTATCAGTGCATTGCCGGTTTGCGCAGAGCTTGCAGATGAGGTGATGGCGGTTCAGATACATTGCTATGTTGTGAAGTCTGGTTTGGGTACGCAGGTGACTATTGGGAATGCATTGGTTGATGTGTATGGCAAGTGTTGGAATGTGAAGGCATCGAAACAGGTTTTTGATGAGATGAGTCAGCGGAATGAGGTTTCTTGGAATGCAGCTATTACTAGTCTTTCTTATGTGGGGAATAACAGGGAAGCATTGGATACATTTAGGTTGATGATTGATGTAGGGGTTAAACCAAACTCTGTCACCATTTCCAGCATGTTACCAGTTTTGGTTGAACTAGAATTATTTGGGGTTGGGAAAGAACTCCATGGTTTCTGTATAAGAATGGGTATTGAATCAGACGTTTTTATTGGCAACTCATTAATTGATATGTATGCAAAATCAGGCCATTCACATGAGGCGTCCAATGTGTTCCGAGAGATGGATGAAAGGAATATTGTTTCTTGGACTGCCATGATTGCTAATTTTGCTCAAAACAGGCTTGAGTTGGAAGCAATTGGACTTGTGAGACAAATGCAAGCTCATGGTGAAATTCCCAATTCTGTCACCATCACAAATCTTCTTCCAGCTTGTGCACGGCTGGGTTCCCTTCGCCTTGGGAAAGAAATTCAGGCAAGGACAATTCGCATGGGATCTGCCTCTGATTTGTTTGTCTCTAATGCTCTCACAGATATGTACGCAAAATGTGGCTGGCTAGATCTTGCTCGAAATGTGTTTAACATATCCCTTAGAGATGAGGTGTCCTACAACACACTGATAATAGGTTATTCTCAGACCAAAGATTGCTCCGAATCTCTAAGTTTGTTTTCTGAAATGAAGCTGGTGGGCATGATGCATGACATTGTTTCATTTGTGGGAGTTATATCAGCTTGCGCAAATCTAACTGCAATCAAGCAAGGCAAAGAGATTCATGGATCTGTAATAAGAAAGTGTTTTGACTCTCATCTCTTTGTTGCAAACTCACTTTTGGATTTCTATACCAAATCTGGCCGAATTGATCTTGCTACTAAGGTCTTTGATCGCATTTCCAACAAGGATGTAGCCTCTTGGAATACTATGATTTTGGGATACGGAATGCTAGGTGAGCTTGACACTGCAATCGGTTTCTTTGAAGCAATGAGGGAAGATGGTGTAGAATATGATTCTGTTTCATACATTGCAGTTTTGTCATCTTGTAGTCATGGGGGGTTAGTTGAGAAGGGCAAAAGATACTTTGAGGGGATGCTGGCACGAAATATTGAGCCTACACAAAAGCACTATGCATGCATGGTTGATCTCCTTGGCCGAGCTGGCCTTATGGAAGAAGCAGTCGAACTTATTAAAGGCATGCCAATTGTACCAGATGCCAACATTTGGGGTTCTTTACTTGGGGCATGTCAAATCCATGGGAACATAGAGTTGGCGAGTTGGGCAGCAGAGTATCTATTTAAGTTAAAACCTGACCATTGTGGGTACTATATACTGCTTTCTAACATGTATGCAGAAGCAGGTAGATGGGAAGATGTAAAGAGGGTGAGGGAATTGATGAAATCAAGGGGATTGAAGAAAAATCCTGCTTACAGTTGGGTTCAGATTCGAGACGAGGTGCATGCTTTTGGAGTTGGAGAGGGACTGGAGAGACTGAATTCAGATTGCTGGCTGGCAGAATCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

811

Amino Acids

90.12

Weight (kDa)

6.42

Isoelectric Point (pI)

32.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 305 - 349 1.9e-07 PPR repeat family
PPR_2 PF13041 405 - 454 8.5e-06 PPR repeat family
PPR_2 PF13041 506 - 554 5.4e-07 PPR repeat family
PPR PF01535 508 - 536 4.4e-06 PPR repeat
PPR_2 PF13041 606 - 654 2.2e-08 PPR repeat family
PPR PF01535 610 - 639 6.9e-06 PPR repeat
E_motif PF20431 723 - 785 8.5e-20 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013595)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20891
malus_domestica MD15G1186900.v1.1
prunus_persica Prupe.6G186500_v2.0.a1
pyrus_communis pycom15g16750
rosa_chinensis RchiOBHm_Chr2g0113511
rosa_laevigata RLG00000018071
rosa_multiflora Rmu_sc0000929.1_g000048 Rmu_sc0007415.1_g000023
rosa_roxburghii Rroxscaffold_2G00129180 Rroxscaffold_2G00129970
rosa_rugosa Rorug02G0187900 Rorug02G0188000
rosa_samantha Rh2AG242600 Rh2BG256500 Rh2CG246800 Rh2CG246900 Rh2DG250600
rosa_wichuraiana Rw2G018970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 811
Acc16I TGCGCA 2 cut(s) 751, 1657
Acc36I ACCTGC 2 cut(s) 811, 2261
AccB7I CCANNNNNTGG 1 cut(s) 2136
AccBSI CCGCTC 1 cut(s) 396
AclWI GGATC 2 cut(s) 1423, 1705
AcoI YGGCCR 2 cut(s) 1771, 2065
AcsI RAATTY 4 cut(s) 691, 1314, 1389, 2407
AcyI GRCGYC 2 cut(s) 264, 1184
AfaI GTAC 4 cut(s) 817, 1460, 2121, 2237
AfiI CCNNNNNNNGG 2 cut(s) 1204, 2136
AflIII ACRYGT 1 cut(s) 2256
AgsI TTSAA 5 cut(s) 253, 1058, 1118, 1895, 2326
AhlI ACTAGT 1 cut(s) 941
AjuI GAANNNNNNNTTGG 4 cut(s) 794, 826, 2165, 2197
Alw21I GWGCWC 1 cut(s) 1360
Alw26I GTCTC 5 cut(s) 217, 1285, 1441, 2355, 2395
Alw44I GTGCAC 1 cut(s) 1356
AlwI GGATC 2 cut(s) 1423, 1705
AoxI GGCC 6 cut(s) 438, 710, 1168, 1771, 2065, 2074
ApaLI GTGCAC 1 cut(s) 1356
ApeKI GCWGC 3 cut(s) 403, 932, 2195
ApoI RAATTY 4 cut(s) 691, 1314, 1389, 2407
AseI ATTAAT 1 cut(s) 1145
AspLEI GCGC 3 cut(s) 224, 752, 1658
AspS9I GGNCC 1 cut(s) 306
AvaII GGWCC 1 cut(s) 306
BaeGI GKGCMC 1 cut(s) 1360
BaeI ACNNNNGTAYC 2 cut(s) 807, 840
Bbv12I GWGCWC 1 cut(s) 1360
BbvI GCAGC 3 cut(s) 415, 944, 2207
BccI CCATC 6 cut(s) 466, 766, 1198, 1340, 1904, 2271
BceAI ACGGC 1 cut(s) 1376
BcgI CGANNNNNNTGC 2 cut(s) 2354, 2388
BciVI GTATCC 2 cut(s) 973, 1844
BclI TGATCA 1 cut(s) 412
BcoDI GTCTC 5 cut(s) 217, 1285, 1441, 2355, 2395
BcuI ACTAGT 1 cut(s) 941
BfaI CTAG 5 cut(s) 500, 942, 1061, 1478, 1862
BfuAI ACCTGC 2 cut(s) 811, 2261
BfuI GTATCC 2 cut(s) 973, 1844
BglI GCCNNNNNGGC 1 cut(s) 2073
BglII AGATCT 1 cut(s) 1480
BisI GCNGC 6 cut(s) 44, 47, 397, 404, 933, 2196
BlsI GCNGC 6 cut(s) 45, 48, 398, 405, 934, 2197
Bme18I GGWCC 1 cut(s) 306
BmgT120I GGNCC 1 cut(s) 306
BmiI GGNNCC 1 cut(s) 1369
BmsI GCATC 5 cut(s) 562, 887, 1605, 1995, 2116
BpmI CTGGAG 1 cut(s) 2417
Bpu10I CCTNAGC 1 cut(s) 351
BpuEI CTTGAG 1 cut(s) 1286
BsaAI YACGTR 1 cut(s) 523
BsaHI GRCGYC 2 cut(s) 264, 1184
BsaJI CCNNGG 4 cut(s) 1090, 1378, 2062, 2167
BsaXI ACNNNNNCTCC 4 cut(s) 98, 128, 197, 227
Bsc4I CCNNNNNNNGG 2 cut(s) 1204, 2136
Bse118I RCCGGY 1 cut(s) 742
Bse1I ACTGG 2 cut(s) 1046, 2400
Bse3DI GCAATG 6 cut(s) 25, 345, 737, 787, 1905, 1938
BseDI CCNNGG 4 cut(s) 1090, 1378, 2062, 2167
BseGI GGATG 6 cut(s) 477, 520, 577, 1213, 1825, 2010
BseLI CCNNNNNNNGG 2 cut(s) 1204, 2136
BseMI GCAATG 6 cut(s) 25, 345, 737, 787, 1905, 1938
BseMII CTCAG 4 cut(s) 40, 365, 591, 1568
BseNI ACTGG 2 cut(s) 1046, 2400
BseRI GAGGAG 3 cut(s) 52, 113, 176
BseSI GKGCMC 1 cut(s) 1360
BseXI GCAGC 3 cut(s) 415, 944, 2207
BseYI CCCAGC 1 cut(s) 1363
BsgI GTGCAG 1 cut(s) 422
Bsh1285I CGRYCG 1 cut(s) 364
BshFI GGCC 6 cut(s) 440, 712, 1170, 1773, 2067, 2076
BsiEI CGRYCG 1 cut(s) 364
BsiHKAI GWGCWC 1 cut(s) 1360
BsiSI CCGG 2 cut(s) 304, 743
BslFI GGGAC 1 cut(s) 2406
BslI CCNNNNNNNGG 2 cut(s) 1204, 2136
BsmAI GTCTC 5 cut(s) 217, 1285, 1441, 2355, 2395
BsmBI CGTCTC 2 cut(s) 217, 2355
BsmFI GGGAC 1 cut(s) 2406
BsmI GAATGC 3 cut(s) 841, 934, 1863
BsnI GGCC 6 cut(s) 440, 712, 1170, 1773, 2067, 2076
Bsp1286I GDGCHC 1 cut(s) 1360
Bsp143I GATC 8 cut(s) 361, 412, 1415, 1480, 1697, 1780, 1801, 2056
Bsp19I CCATGG 2 cut(s) 1090, 2167
BspANI GGCC 6 cut(s) 440, 712, 1170, 1773, 2067, 2076
BspCNI CTCAG 4 cut(s) 39, 364, 592, 1567
BspLI GGNNCC 1 cut(s) 1369
BspMI ACCTGC 2 cut(s) 811, 2261
BspPI GGATC 2 cut(s) 1423, 1705
BsrBI CCGCTC 1 cut(s) 396
BsrDI GCAATG 6 cut(s) 25, 345, 737, 787, 1905, 1938
BsrFI RCCGGY 1 cut(s) 742
BsrI ACTGG 2 cut(s) 1046, 2400
BssAI RCCGGY 1 cut(s) 742
BssECI CCNNGG 4 cut(s) 1090, 1378, 2062, 2167
BssMI GATC 8 cut(s) 361, 412, 1415, 1480, 1697, 1780, 1801, 2056
BssNI GRCGYC 2 cut(s) 264, 1184
BssT1I CCWWGG 4 cut(s) 1090, 1378, 2062, 2167
Bst4CI ACNGT 2 cut(s) 292, 2345
BstACI GRCGYC 2 cut(s) 264, 1184
BstAPI GCANNNNNTGC 1 cut(s) 758
BstBAI YACGTR 1 cut(s) 523
BstDEI CTNAG 8 cut(s) 26, 351, 566, 600, 1511, 1554, 1580, 1791
BstDSI CCRYGG 2 cut(s) 1090, 2167
BstF5I GGATG 6 cut(s) 477, 520, 577, 1213, 1825, 2010
BstHHI GCGC 3 cut(s) 224, 752, 1658
BstKTI GATC 8 cut(s) 364, 415, 1418, 1483, 1700, 1783, 1804, 2059
BstMAI GTCTC 5 cut(s) 217, 1285, 1441, 2355, 2395
BstMBI GATC 8 cut(s) 361, 412, 1415, 1480, 1697, 1780, 1801, 2056
BstMCI CGRYCG 1 cut(s) 364
BstMWI GCNNNNNNNGC 6 cut(s) 758, 1241, 1250, 1867, 2073, 2192
BstNSI RCATGY 6 cut(s) 1042, 2049, 2113, 2160, 2260, 2375
BstSLI GKGCMC 1 cut(s) 1360
BstV1I GCAGC 3 cut(s) 415, 944, 2207
BstX2I RGATCY 3 cut(s) 1415, 1480, 1697
BstYI RGATCY 3 cut(s) 1415, 1480, 1697
BsuI GTATCC 2 cut(s) 973, 1844
BsuRI GGCC 6 cut(s) 440, 712, 1170, 1773, 2067, 2076
BtgI CCRYGG 2 cut(s) 1090, 2167
BtsCI GGATG 6 cut(s) 477, 520, 577, 1213, 1825, 2010
BtsI GCAGTG 2 cut(s) 668, 1875
BtsIMutI CAGTG 4 cut(s) 668, 739, 1535, 1875
BveI ACCTGC 2 cut(s) 811, 2261
CfoI GCGC 3 cut(s) 224, 752, 1658
Cfr10I RCCGGY 1 cut(s) 742
Cfr13I GGNCC 1 cut(s) 306
CpoI CGGWCCG 1 cut(s) 306
CseI GACGC 3 cut(s) 199, 272, 1173
Csp6I GTAC 4 cut(s) 816, 1459, 2120, 2236
CspI CGGWCCG 1 cut(s) 306
CviQI GTAC 4 cut(s) 816, 1459, 2120, 2236
DdeI CTNAG 8 cut(s) 26, 351, 566, 600, 1511, 1554, 1580, 1791
DpnI GATC 8 cut(s) 363, 414, 1417, 1482, 1699, 1782, 1803, 2058
DpnII GATC 8 cut(s) 361, 412, 1415, 1480, 1697, 1780, 1801, 2056
EaeI YGGCCR 2 cut(s) 1771, 2065
EciI GGCGGA 2 cut(s) 143, 263
Eco130I CCWWGG 4 cut(s) 1090, 1378, 2062, 2167
Eco147I AGGCCT 1 cut(s) 440
Eco47I GGWCC 1 cut(s) 306
EcoRI GAATTC 1 cut(s) 2407
EcoT14I CCWWGG 4 cut(s) 1090, 1378, 2062, 2167
EcoT22I ATGCAT 4 cut(s) 841, 1620, 2047, 2051
ErhI CCWWGG 4 cut(s) 1090, 1378, 2062, 2167
Esp3I CGTCTC 2 cut(s) 217, 2355
FaqI GGGAC 1 cut(s) 2406
FauI CCCGC 2 cut(s) 48, 551
FbaI TGATCA 1 cut(s) 412
Fnu4HI GCNGC 6 cut(s) 44, 47, 397, 404, 933, 2196
FokI GGATG 6 cut(s) 484, 527, 584, 1220, 1832, 2017
Fsp4HI GCNGC 6 cut(s) 44, 47, 397, 404, 933, 2196
FspBI CTAG 5 cut(s) 500, 942, 1061, 1478, 1862
FspI TGCGCA 2 cut(s) 751, 1657
GlaI GCGC 3 cut(s) 223, 751, 1657
GluI GCNGC 6 cut(s) 44, 47, 397, 404, 933, 2196
GsaI CCCAGC 1 cut(s) 1367
GsuI CTGGAG 1 cut(s) 2417
HaeIII GGCC 6 cut(s) 440, 712, 1170, 1773, 2067, 2076
HapII CCGG 2 cut(s) 304, 743
HgaI GACGC 3 cut(s) 199, 272, 1173
HhaI GCGC 3 cut(s) 224, 752, 1658
Hin1I GRCGYC 2 cut(s) 264, 1184
Hin6I GCGC 3 cut(s) 222, 750, 1656
HinP1I GCGC 3 cut(s) 222, 750, 1656
HpaII CCGG 2 cut(s) 304, 743
Hpy166II GTNNAC 3 cut(s) 358, 520, 1358
Hpy188III TCNNGA 1 cut(s) 2360
Hpy8I GTNNAC 3 cut(s) 358, 520, 1358
Hpy99I CGWCG 1 cut(s) 266
HpyAV CCTTC 6 cut(s) 259, 460, 574, 868, 1382, 1975
HpyCH4III ACNGT 2 cut(s) 292, 2345
HpyCH4IV ACGT 3 cut(s) 522, 660, 1125
HpyF10VI GCNNNNNNNGC 6 cut(s) 758, 1241, 1250, 1867, 2073, 2192
HpyF3I CTNAG 8 cut(s) 26, 351, 566, 600, 1511, 1554, 1580, 1791
HpySE526I ACGT 3 cut(s) 522, 660, 1125
Hsp92I GRCGYC 2 cut(s) 264, 1184
HspAI GCGC 3 cut(s) 222, 750, 1656
Ksp22I TGATCA 1 cut(s) 412
Kzo9I GATC 8 cut(s) 361, 412, 1415, 1480, 1697, 1780, 1801, 2056
LmnI GCTCC 3 cut(s) 347, 393, 1574
Lsp1109I GCAGC 3 cut(s) 415, 944, 2207
LweI GCATC 5 cut(s) 562, 887, 1605, 1995, 2116
MaeI CTAG 5 cut(s) 500, 942, 1061, 1478, 1862
MaeII ACGT 3 cut(s) 522, 660, 1125
MaeIII GTNAC 6 cut(s) 551, 656, 823, 1024, 1041, 1327
MalI GATC 8 cut(s) 363, 414, 1417, 1482, 1699, 1782, 1803, 2058
MbiI CCGCTC 1 cut(s) 396
MboI GATC 8 cut(s) 361, 412, 1415, 1480, 1697, 1780, 1801, 2056
MboII GAAGA 7 cut(s) 475, 1334, 1337, 1919, 2096, 2294, 2338
MfeI CAATTG 2 cut(s) 1278, 2115
MflI RGATCY 3 cut(s) 1415, 1480, 1697
MhlI GDGCHC 1 cut(s) 1360
MlyI GAGTC 3 cut(s) 443, 913, 1715
MmeI TCCRAC 5 cut(s) 162, 845, 1251, 1836, 2365
Mph1103I ATGCAT 4 cut(s) 841, 1620, 2047, 2051
MslI CAYNNNNRTG 4 cut(s) 18, 792, 1176, 1454
MspA1I CMGCKG 2 cut(s) 49, 910
MspI CCGG 2 cut(s) 304, 743
MunI CAATTG 2 cut(s) 1278, 2115
Mva1269I GAATGC 3 cut(s) 841, 934, 1863
MwoI GCNNNNNNNGC 6 cut(s) 758, 1241, 1250, 1867, 2073, 2192
NcoI CCATGG 2 cut(s) 1090, 2167
NdeII GATC 8 cut(s) 361, 412, 1415, 1480, 1697, 1780, 1801, 2056
NlaIV GGNNCC 1 cut(s) 1369
NmeAIII GCCGAG 1 cut(s) 2093
NmuCI GTSAC 3 cut(s) 823, 1024, 1327
NsbI TGCGCA 2 cut(s) 751, 1657
NsiI ATGCAT 4 cut(s) 841, 1620, 2047, 2051
NspI RCATGY 6 cut(s) 1042, 2049, 2113, 2160, 2260, 2375
PaeI GCATGC 3 cut(s) 2049, 2113, 2375
PaqCI CACCTGC 1 cut(s) 811
PceI AGGCCT 1 cut(s) 440
PciI ACATGT 1 cut(s) 2256
PcsI WCGNNNNNNNCGW 1 cut(s) 539
PctI GAATGC 3 cut(s) 841, 934, 1863
PfeI GAWTC 7 cut(s) 509, 1118, 1574, 1690, 1925, 2356, 2429
PflMI CCANNNNNTGG 1 cut(s) 2136
PkrI GCNGC 6 cut(s) 45, 48, 398, 405, 934, 2197
Ple19I CGATCG 1 cut(s) 364
PleI GAGTC 3 cut(s) 443, 912, 1715
PpsI GAGTC 3 cut(s) 443, 912, 1715
Ppu21I YACGTR 1 cut(s) 523
PscI ACATGT 1 cut(s) 2256
PshBI ATTAAT 1 cut(s) 1145
PspFI CCCAGC 1 cut(s) 1363
PspN4I GGNNCC 1 cut(s) 1369
PspPI GGNCC 1 cut(s) 306
PsuI RGATCY 3 cut(s) 1415, 1480, 1697
PvuI CGATCG 1 cut(s) 364
RsaI GTAC 4 cut(s) 817, 1460, 2121, 2237
RsaNI GTAC 4 cut(s) 816, 1459, 2120, 2236
RseI CAYNNNNRTG 4 cut(s) 18, 792, 1176, 1454
Rsr2I CGGWCCG 1 cut(s) 306
RsrII CGGWCCG 1 cut(s) 306
SatI GCNGC 6 cut(s) 44, 47, 397, 404, 933, 2196
Sau3AI GATC 8 cut(s) 361, 412, 1415, 1480, 1697, 1780, 1801, 2056
Sau96I GGNCC 1 cut(s) 306
SchI GAGTC 3 cut(s) 443, 913, 1715
SduI GDGCHC 1 cut(s) 1360
SfaNI GCATC 5 cut(s) 562, 887, 1605, 1995, 2116
SfiI GGCCNNNNNGGCC 1 cut(s) 2073
SinI GGWCC 1 cut(s) 306
SmiMI CAYNNNNRTG 4 cut(s) 18, 792, 1176, 1454
SmlI CTYRAG 1 cut(s) 1265
SmoI CTYRAG 1 cut(s) 1265
SpeI ACTAGT 1 cut(s) 941
SphI GCATGC 3 cut(s) 2049, 2113, 2375
SseBI AGGCCT 1 cut(s) 440
SspI AATATT 2 cut(s) 1219, 2020
SspMI CTAG 5 cut(s) 500, 942, 1061, 1478, 1862
StuI AGGCCT 1 cut(s) 440
StyI CCWWGG 4 cut(s) 1090, 1378, 2062, 2167
TaaI ACNGT 2 cut(s) 292, 2345
TaiI ACGT 3 cut(s) 525, 663, 1128
TaqI TCGA 5 cut(s) 408, 881, 1489, 2094, 2359
TauI GCSGC 3 cut(s) 46, 49, 399
TfiI GAWTC 7 cut(s) 509, 1118, 1574, 1690, 1925, 2356, 2429
TscAI CASTG 4 cut(s) 675, 739, 1542, 1882
TseFI GTSAC 3 cut(s) 823, 1024, 1327
TseI GCWGC 3 cut(s) 403, 932, 2195
Tsp45I GTSAC 3 cut(s) 823, 1024, 1327
TspDTI ATGAA 9 cut(s) 470, 606, 704, 1224, 1613, 1620, 1682, 1923, 2324
TspGWI ACGGA 3 cut(s) 470, 592, 1869
TspRI CASTG 4 cut(s) 675, 739, 1542, 1882
Van91I CCANNNNNTGG 1 cut(s) 2136
VneI GTGCAC 1 cut(s) 1356
VpaK11BI GGWCC 1 cut(s) 306
VspI ATTAAT 1 cut(s) 1145
XapI RAATTY 4 cut(s) 691, 1314, 1389, 2407
XceI RCATGY 6 cut(s) 1042, 2049, 2113, 2160, 2260, 2375
XcmI CCANNNNNNNNNTGG 1 cut(s) 352
XspI CTAG 5 cut(s) 500, 942, 1061, 1478, 1862
Zsp2I ATGCAT 4 cut(s) 841, 1620, 2047, 2051
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.