pycom15g22630

Coenzyme A synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0005019
Physical Location & Seq
Forward (+)
16698932 .. 16700636
1705 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g22630.5

Sequence Viewer

Length: 519 bp
ATGGCGACTTCTGATGTTATGGCGAATTACAAGCTCTCTCCGCCGAATACTTATGGAGCCGTGGTTCTTGGCGGCACCTTCGACCGCTTACACAACGGCCATCGATATTTTCTCAAGGCCGCGACGGACTTGGCTAGGGATCGAGTTGTGGTTGGAATTTGCGACGGACCTATGTTGGCCAACAAACAGTTTGCTGAGTTGATACAACCCGTTGAGGAAAGGATGAATAATGTTGAAAATTACCTCAAGTCTATCACGCAGTCGCTTGAAGTGCAAGTTCAACCTATTACGGATCCCTATGGCCCTGCAATAGTTGATGAGAATCTGGAGGCAATTGTTGTCAGCAAGGAGGCGCTAGACGGCGGACTGTCTGTTAATAAGAAGAGAGCTGAGGAAGGCCTTCCGCAGCTTAAGATTGAAGTTGTAGATCTGTATTCTGGATCCGGCGGAGATAGGCCGAGTTCATCATCGTTGAGGAAGCGTGAGGCGGAGAAGGCCAAGAACTACCAGCCAGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001667 GO:0002009 GO:0002064 GO:0002065 GO:0002066 GO:0002165 GO:0003006 GO:0003674 GO:0003824 GO:0004140 GO:0004595 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005739 GO:0005740 GO:0005741 GO:0005759 GO:0005829 GO:0006139 GO:0006140 GO:0006163 GO:0006164 GO:0006629 GO:0006725 GO:0006732 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006928 GO:0006950 GO:0006970 GO:0007275 GO:0007276 GO:0007281 GO:0007292 GO:0007297 GO:0007300 GO:0007303 GO:0007444 GO:0007472 GO:0007476 GO:0007552 GO:0007560 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009259 GO:0009260 GO:0009628 GO:0009651 GO:0009653 GO:0009791 GO:0009886 GO:0009887 GO:0009888 GO:0009889 GO:0009987 GO:0010631 GO:0010876 GO:0015936 GO:0015937 GO:0016020 GO:0016301 GO:0016310 GO:0016477 GO:0016482 GO:0016740 GO:0016772 GO:0016773 GO:0016779 GO:0018130 GO:0019219 GO:0019220 GO:0019222 GO:0019438 GO:0019637 GO:0019693 GO:0019867 GO:0019915 GO:0019953 GO:0022412 GO:0022414 GO:0030154 GO:0030707 GO:0030808 GO:0030855 GO:0031090 GO:0031323 GO:0031326 GO:0031966 GO:0031967 GO:0031968 GO:0031974 GO:0031975 GO:0031981 GO:0032501 GO:0032502 GO:0032504 GO:0032991 GO:0033036 GO:0033865 GO:0033866 GO:0033875 GO:0034030 GO:0034032 GO:0034033 GO:0034641 GO:0034654 GO:0035107 GO:0035114 GO:0035120 GO:0035220 GO:0035239 GO:0035295 GO:0040007 GO:0040011 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044428 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0044703 GO:0046390 GO:0046483 GO:0046907 GO:0048468 GO:0048477 GO:0048513 GO:0048563 GO:0048569 GO:0048609 GO:0048707 GO:0048729 GO:0048731 GO:0048736 GO:0048737 GO:0048856 GO:0048869 GO:0048870 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051174 GO:0051179 GO:0051186 GO:0051188 GO:0051193 GO:0051196 GO:0051234 GO:0051235 GO:0051641 GO:0051649 GO:0051674 GO:0051704 GO:0055086 GO:0055088 GO:0055090 GO:0060429 GO:0060562 GO:0062012 GO:0065007 GO:0065008 GO:0070013 GO:0070328 GO:0070566 GO:0071704 GO:0072521 GO:0072522 GO:0080020 GO:0080090 GO:0090130 GO:0090132 GO:0090407 GO:0098588 GO:0098805 GO:1900371 GO:1900542 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1990143
KEGG Pathways
Metabolic & Signaling
ko00770 ko01100 ko04130 ko04721 map00770 map01100 map04130 map04721
Pfam Domains
Protein Families
CTP_transf_like CoaE

Protein Analysis

173

Amino Acids

18.81

Weight (kDa)

5.47

Isoelectric Point (pI)

40.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 74
AccII CGCG 1 cut(s) 122
AciI CCGC 8 cut(s) 41, 72, 85, 120, 363, 404, 447, 488
AclWI GGATC 5 cut(s) 147, 287, 300, 435, 448
AcoI YGGCCR 2 cut(s) 97, 177
AcsI RAATTY 1 cut(s) 156
AflII CTTAAG 1 cut(s) 410
AgsI TTSAA 4 cut(s) 236, 269, 281, 419
AloI GAACNNNNNNTCC 2 cut(s) 48, 80
AluBI AGCT 3 cut(s) 34, 389, 409
AluI AGCT 3 cut(s) 34, 389, 409
AlwI GGATC 5 cut(s) 147, 287, 300, 435, 448
AoxI GGCC 7 cut(s) 97, 117, 177, 301, 397, 455, 495
ApeKI GCWGC 1 cut(s) 406
ApoI RAATTY 1 cut(s) 156
Asp700I GAANNNNTTC 1 cut(s) 399
AspLEI GCGC 1 cut(s) 355
AspS9I GGNCC 2 cut(s) 167, 302
AvaII GGWCC 1 cut(s) 167
BalI TGGCCA 1 cut(s) 179
BamHI GGATCC 2 cut(s) 292, 440
BanI GGYRCC 1 cut(s) 74
BbvCI CCTCAGC 1 cut(s) 390
BbvI GCAGC 1 cut(s) 418
BccI CCATC 1 cut(s) 108
BceAI ACGGC 3 cut(s) 44, 112, 376
BfaI CTAG 2 cut(s) 135, 356
BfoI RGCGCY 1 cut(s) 356
BfrI CTTAAG 1 cut(s) 410
BglII AGATCT 1 cut(s) 427
BisI GCNGC 3 cut(s) 73, 120, 407
BlsI GCNGC 3 cut(s) 74, 121, 408
Bme18I GGWCC 1 cut(s) 167
BmgT120I GGNCC 2 cut(s) 167, 302
BmiI GGNNCC 4 cut(s) 58, 76, 294, 442
BpmI CTGGAG 1 cut(s) 347
Bpu10I CCTNAGC 1 cut(s) 390
BpuEI CTTGAG 2 cut(s) 98, 230
Bsa29I ATCGAT 1 cut(s) 103
BsaBI GATNNNNATC 1 cut(s) 321
BsaJI CCNNGG 1 cut(s) 60
BsaXI ACNNNNNCTCC 2 cut(s) 48, 78
Bse8I GATNNNNATC 1 cut(s) 321
BseCI ATCGAT 1 cut(s) 103
BseDI CCNNGG 1 cut(s) 60
BseGI GGATG 1 cut(s) 228
BseJI GATNNNNATC 1 cut(s) 321
BseMII CTCAG 2 cut(s) 186, 381
BseXI GCAGC 1 cut(s) 418
Bsh1236I CGCG 1 cut(s) 122
Bsh1285I CGRYCG 1 cut(s) 85
BshFI GGCC 7 cut(s) 99, 119, 179, 303, 399, 457, 497
BshNI GGYRCC 1 cut(s) 74
BshVI ATCGAT 1 cut(s) 103
BsiEI CGRYCG 1 cut(s) 85
BsiSI CCGG 1 cut(s) 444
BsnI GGCC 7 cut(s) 99, 119, 179, 303, 399, 457, 497
Bsp143I GATC 4 cut(s) 139, 292, 427, 440
BspACI CCGC 8 cut(s) 41, 72, 85, 120, 363, 404, 447, 488
BspANI GGCC 7 cut(s) 99, 119, 179, 303, 399, 457, 497
BspCNI CTCAG 2 cut(s) 187, 382
BspDI ATCGAT 1 cut(s) 103
BspFNI CGCG 1 cut(s) 122
BspLI GGNNCC 4 cut(s) 58, 76, 294, 442
BspPI GGATC 5 cut(s) 147, 287, 300, 435, 448
BspT107I GGYRCC 1 cut(s) 74
BspTI CTTAAG 1 cut(s) 410
BssECI CCNNGG 1 cut(s) 60
BssMI GATC 4 cut(s) 139, 292, 427, 440
Bst4CI ACNGT 2 cut(s) 189, 369
Bst6I CTCTTC 1 cut(s) 377
BstAFI CTTAAG 1 cut(s) 410
BstC8I GCNNGC 1 cut(s) 513
BstDEI CTNAG 2 cut(s) 195, 390
BstDSI CCRYGG 1 cut(s) 60
BstF5I GGATG 1 cut(s) 228
BstFNI CGCG 1 cut(s) 122
BstH2I RGCGCY 1 cut(s) 356
BstHHI GCGC 1 cut(s) 355
BstKTI GATC 4 cut(s) 142, 295, 430, 443
BstMBI GATC 4 cut(s) 139, 292, 427, 440
BstMCI CGRYCG 1 cut(s) 85
BstMWI GCNNNNNNNGC 3 cut(s) 40, 271, 494
BstUI CGCG 1 cut(s) 122
BstV1I GCAGC 1 cut(s) 418
BstX2I RGATCY 3 cut(s) 292, 427, 440
BstYI RGATCY 3 cut(s) 292, 427, 440
Bsu15I ATCGAT 1 cut(s) 103
BsuRI GGCC 7 cut(s) 99, 119, 179, 303, 399, 457, 497
BsuTUI ATCGAT 1 cut(s) 103
BtgI CCRYGG 1 cut(s) 60
BtsCI GGATG 1 cut(s) 228
Cac8I GCNNGC 1 cut(s) 513
CfoI GCGC 1 cut(s) 355
Cfr13I GGNCC 2 cut(s) 167, 302
ClaI ATCGAT 1 cut(s) 103
DdeI CTNAG 2 cut(s) 195, 390
DpnI GATC 4 cut(s) 141, 294, 429, 442
DpnII GATC 4 cut(s) 139, 292, 427, 440
EaeI YGGCCR 2 cut(s) 97, 177
Eam1104I CTCTTC 1 cut(s) 377
EarI CTCTTC 1 cut(s) 377
EciI GGCGGA 4 cut(s) 30, 378, 462, 503
Eco147I AGGCCT 1 cut(s) 399
Eco47I GGWCC 1 cut(s) 167
FaiI YATR 5 cut(s) 20, 54, 173, 300, 517
Fnu4HI GCNGC 3 cut(s) 73, 120, 407
FokI GGATG 1 cut(s) 235
Fsp4HI GCNGC 3 cut(s) 73, 120, 407
FspBI CTAG 2 cut(s) 135, 356
GlaI GCGC 1 cut(s) 354
GluI GCNGC 3 cut(s) 73, 120, 407
GsuI CTGGAG 1 cut(s) 347
HaeII RGCGCY 1 cut(s) 356
HaeIII GGCC 7 cut(s) 99, 119, 179, 303, 399, 457, 497
HapII CCGG 1 cut(s) 444
HhaI GCGC 1 cut(s) 355
Hin6I GCGC 1 cut(s) 353
HinP1I GCGC 1 cut(s) 353
HinfI GANTC 1 cut(s) 322
HpaII CCGG 1 cut(s) 444
Hpy188I TCNGA 1 cut(s) 13
Hpy188III TCNNGA 2 cut(s) 326, 438
Hpy99I CGWCG 2 cut(s) 127, 167
HpyAV CCTTC 4 cut(s) 88, 389, 410, 487
HpyCH4III ACNGT 2 cut(s) 189, 369
HpyCH4V TGCA 2 cut(s) 274, 308
HpyF10VI GCNNNNNNNGC 3 cut(s) 40, 271, 494
HpyF3I CTNAG 2 cut(s) 195, 390
HspAI GCGC 1 cut(s) 353
Kzo9I GATC 4 cut(s) 139, 292, 427, 440
LmnI GCTCC 1 cut(s) 56
LpnPI CCDG 4 cut(s) 311, 318, 423, 457
Lsp1109I GCAGC 1 cut(s) 418
MaeI CTAG 2 cut(s) 135, 356
MalI GATC 4 cut(s) 141, 294, 429, 442
MboI GATC 4 cut(s) 139, 292, 427, 440
MboII GAAGA 1 cut(s) 394
MfeI CAATTG 1 cut(s) 333
MflI RGATCY 3 cut(s) 292, 427, 440
MlsI TGGCCA 1 cut(s) 179
MluCI AATT 4 cut(s) 25, 156, 238, 333
MluNI TGGCCA 1 cut(s) 179
MmeI TCCRAC 1 cut(s) 133
MnlI CCTC 7 cut(s) 208, 254, 322, 343, 385, 468, 478
Mox20I TGGCCA 1 cut(s) 179
MroXI GAANNNNTTC 1 cut(s) 399
MscI TGGCCA 1 cut(s) 179
MseI TTAA 2 cut(s) 375, 411
Msp20I TGGCCA 1 cut(s) 179
MspCI CTTAAG 1 cut(s) 410
MspI CCGG 1 cut(s) 444
MunI CAATTG 1 cut(s) 333
MvnI CGCG 1 cut(s) 122
MwoI GCNNNNNNNGC 3 cut(s) 40, 271, 494
NdeII GATC 4 cut(s) 139, 292, 427, 440
NlaIV GGNNCC 4 cut(s) 58, 76, 294, 442
NmeAIII GCCGAG 1 cut(s) 483
PceI AGGCCT 1 cut(s) 399
PdmI GAANNNNTTC 1 cut(s) 399
PfeI GAWTC 1 cut(s) 322
PkrI GCNGC 3 cut(s) 74, 121, 408
PspN4I GGNNCC 4 cut(s) 58, 76, 294, 442
PspPI GGNCC 2 cut(s) 167, 302
PsuI RGATCY 3 cut(s) 292, 427, 440
SaqAI TTAA 2 cut(s) 375, 411
SatI GCNGC 3 cut(s) 73, 120, 407
Sau3AI GATC 4 cut(s) 139, 292, 427, 440
Sau96I GGNCC 2 cut(s) 167, 302
SetI ASST 7 cut(s) 36, 80, 172, 246, 286, 391, 411
SinI GGWCC 1 cut(s) 167
SmlI CTYRAG 3 cut(s) 113, 245, 410
SmoI CTYRAG 3 cut(s) 113, 245, 410
Sse9I AATT 4 cut(s) 25, 156, 238, 333
SseBI AGGCCT 1 cut(s) 399
SsiI CCGC 8 cut(s) 41, 72, 85, 120, 363, 404, 447, 488
SspMI CTAG 2 cut(s) 135, 356
StuI AGGCCT 1 cut(s) 399
TaaI ACNGT 2 cut(s) 189, 369
TaqI TCGA 3 cut(s) 81, 103, 142
TasI AATT 4 cut(s) 25, 156, 238, 333
TauI GCSGC 2 cut(s) 75, 122
TfiI GAWTC 1 cut(s) 322
Tru1I TTAA 2 cut(s) 375, 411
Tru9I TTAA 2 cut(s) 375, 411
TseI GCWGC 1 cut(s) 406
TspDTI ATGAA 2 cut(s) 239, 453
TspGWI ACGGA 3 cut(s) 140, 180, 305
Vha464I CTTAAG 1 cut(s) 410
VpaK11BI GGWCC 1 cut(s) 167
XapI RAATTY 1 cut(s) 156
XmnI GAANNNNTTC 1 cut(s) 399
XspI CTAG 2 cut(s) 135, 356
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.