Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0003203

Physical Location & Seq

Genomic Coordinates Forward (+)

8548591 .. 8551623

Gene Structure 3033 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0100500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1041 bp

ATGCTCACCTCCAAACCCTCTCACTCTCACTCTCACTCTCCAATTCGAATTCTCACCGTCGACGACGATGCCGACGCTGACGTCATCTTCCCTCCGATTCCCCACAGCTCCTCCTCCCCCGCGATCGCCCTCCACGACGATCGCAAAGACCCATCTGCCCTCAGATCATCTCCCTCCCCGACCAAAGTACCCACCTTTATCGACCTCTCCGACGAACCCGATGACGGAGACGACGACGAGATTCGGATTCTCCGATTCAAACCCACCAAAACCCACTTCAAAAAGCGAAGAACAAACCCGTTTACATCCGGGTCCGTATCCGAACCCGGCCAGTCCTCCTCCGATTCTCTCACCGACTACCCACCGTTCGTCTGTGATATTTGCGCCGACGACAAGCTCGGGTACCAATCTTTTCCGATCGAGAATTGCAACCATGTGTATTGCTCCGATTGTGTGATCAACTACATCGATTCCAAGCTCCAAGAAAACGAACCCACAATTCGGTGCCCTGTTCCAGGGTGCAAGGGTCTGCTGGAGCCCGAGTACTGCCGCTCGGTTCTGCCGGCTCAGGTGTTTGCGAGGTGGGGAAAGGCAATGTGTGATGCTGTGATACTCGGGTCGGAGAAATTCTACTGCCCATATCAGGACTGCTCTGCTCTGCTGATCGATGACGGGGAGGAGGTGGTGAGGGAGTCGCAGTGCCCGCATTGTGGGAGAATGTTCTGTGCTCAGTGCAAGGTTGCTTGGCATGTCGGGATGGATTGCAGCGAGTTTCAGAGGCTGAGTGTGGATGAGAGAGGGAATGAAGATGTTATGTTGAGGAACCTGGCGCAGAGCCAGAACTGGAGGAGGTGTCCCAGCTGCATGTTCTATGTCGAAAAGTCTGTTGGTTGCTCCTACATGAAATGCAGGTGTGGATCTCCAGATTGTCTCTTTGTTTTACTGATGGATTGCCAATGTAAATTGCTGCAGGTGTGGATATGCATTCTGTTACAATTGTGGAGTACAAGCTGTCAGTCATACCTGTCGAAGCTGTCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000149 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006810 GO:0006887 GO:0006906 GO:0006950 GO:0006996 GO:0008150 GO:0009266 GO:0009409 GO:0009628 GO:0009987 GO:0012505 GO:0016020 GO:0016021 GO:0016043 GO:0016050 GO:0016192 GO:0022406 GO:0031201 GO:0031224 GO:0032940 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0046903 GO:0048278 GO:0048284 GO:0050896 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0061024 GO:0061025 GO:0071840 GO:0071944 GO:0090174 GO:0098796 GO:0140056

KEGG Pathways

Metabolic & Signaling

ko00770 ko01100 ko04130 ko04721 map00770 map01100 map04130 map04721

Pfam Domains

Protein Families

CTP_transf_like SNARE Syntaxin

Protein Analysis

346

Amino Acids

38.88

Weight (kDa)

5.22

Isoelectric Point (pI)

61.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IBR	PF01485	203 - 255	2.7e-10	IBR domain, a half RING-finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003203)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18260 AT2G18260
fragaria_vesca	FvH4_1g13020 FvH4_2g09080 FvH4_2g09080
malus_domestica	MD02G1144800.v1.1 MD05G1064700.v1.1 MD15G1259000.v1.1
prunus_persica	Prupe.7G156800_v2.0.a1 Prupe.8G094700_v2.0.a1 Prupe.8G094700_v2.0.a1
pyrus_communis	pycom02g11470 pycom05g05560 pycom15g22740
rosa_chinensis	RchiOBHm_Chr2g0101181 RchiOBHm_Chr6g0264961
rosa_laevigata	RLG00000014227 RLG00000017053
rosa_multiflora	Rmu_co8052262.1_g000001 Rmu_sc0002934.1_g000038 Rmu_sc0006314.1_g000005
rosa_roxburghii	Rroxscaffold_175G00432060 Rroxscaffold_2G00141520 Rroxscaffold_7G00203130
rosa_rugosa	Rorug02G0100400 Rorug02G0100500 Rorug06G0014100
rosa_samantha	Rh2AG144200 Rh2BG149200 Rh2CG150500 Rh2DG149700 Rh6AG135300 Rh6BG132700 Rh6CG131400 Rh6DG118400
rosa_wichuraiana	Rw2G011300 Rw6G011690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	900, 961
AasI	GACNNNNNNGTC	1 cut(s)	80
AatII	GACGTC	1 cut(s)	84
Acc36I	ACCTGC	2 cut(s)	900, 961
Acc65I	GGTACC	1 cut(s)	402
AccB1I	GGYRCC	2 cut(s)	402, 504
AccBSI	CCGCTC	1 cut(s)	552
AccI	GTMKAC	1 cut(s)	60
AccII	CGCG	1 cut(s)	122
AciI	CCGC	3 cut(s)	120, 550, 704
AclWI	GGATC	1 cut(s)	925
AcoI	YGGCCR	1 cut(s)	328
AcsI	RAATTY	2 cut(s)	48, 626
AcyI	GRCGYC	1 cut(s)	81
AfaI	GTAC	4 cut(s)	189, 404, 545, 1006
AfiI	CCNNNNNNNGG	5 cut(s)	224, 501, 515, 643, 710
AgsI	TTSAA	2 cut(s)	259, 280
AjnI	CCWGG	2 cut(s)	514, 825
AjuI	GAANNNNNNNTTGG	4 cut(s)	260, 292, 870, 902
AluBI	AGCT	6 cut(s)	108, 397, 478, 861, 1011, 1033
AluI	AGCT	6 cut(s)	108, 397, 478, 861, 1011, 1033
Alw21I	GWGCWC	1 cut(s)	730
Alw26I	GTCTC	2 cut(s)	222, 935
AlwI	GGATC	1 cut(s)	925
AlwNI	CAGNNNCTG	1 cut(s)	781
Ama87I	CYCGRG	3 cut(s)	398, 539, 614
AoxI	GGCC	1 cut(s)	328
ApeKI	GCWGC	3 cut(s)	765, 861, 967
ApoI	RAATTY	2 cut(s)	48, 626
AsiSI	GCGATCGC	1 cut(s)	126
Asp718I	GGTACC	1 cut(s)	402
AspLEI	GCGC	2 cut(s)	386, 832
AspS9I	GGNCC	1 cut(s)	312
AsuC2I	CCSGG	2 cut(s)	310, 327
AsuHPI	GGTGA	3 cut(s)	46, 343, 697
AsuII	TTCGAA	1 cut(s)	46
AvaI	CYCGRG	3 cut(s)	398, 539, 614
AvaII	GGWCC	1 cut(s)	312
BaeGI	GKGCMC	2 cut(s)	509, 704
BaeI	ACNNNNGTAYC	4 cut(s)	171, 204, 602, 635
BanI	GGYRCC	2 cut(s)	402, 504
BanII	GRGCYC	1 cut(s)	540
Bbv12I	GWGCWC	1 cut(s)	730
BbvI	GCAGC	3 cut(s)	777, 848, 954
BccI	CCATC	3 cut(s)	160, 751, 940
BcgI	CGANNNNNNTGC	2 cut(s)	50, 84
BciT130I	CCWGG	2 cut(s)	516, 827
BciVI	GTATCC	1 cut(s)	328
BclI	TGATCA	1 cut(s)	456
BcnI	CCSGG	2 cut(s)	310, 327
BcoDI	GTCTC	2 cut(s)	222, 935
BfmI	CTRYAG	1 cut(s)	968
BfuAI	ACCTGC	2 cut(s)	900, 961
BfuI	GTATCC	1 cut(s)	328
BisI	GCNGC	4 cut(s)	550, 766, 862, 968
BlsI	GCNGC	4 cut(s)	551, 767, 863, 969
BmcAI	AGTACT	1 cut(s)	545
Bme1390I	CCNGG	4 cut(s)	310, 327, 516, 827
Bme18I	GGWCC	1 cut(s)	312
BmeT110I	CYCGRG	3 cut(s)	398, 539, 614
BmgT120I	GGNCC	1 cut(s)	312
BmiI	GGNNCC	5 cut(s)	313, 404, 506, 537, 824
BmrFI	CCNGG	4 cut(s)	310, 327, 516, 827
BmsI	GCATC	2 cut(s)	58, 592
BpmI	CTGGAG	3 cut(s)	554, 865, 906
Bpu10I	CCTNAGC	1 cut(s)	567
Bpu14I	TTCGAA	1 cut(s)	46
BpuMI	CCSGG	2 cut(s)	310, 327
Bsa29I	ATCGAT	2 cut(s)	468, 666
BsaHI	GRCGYC	1 cut(s)	81
BsaJI	CCNNGG	1 cut(s)	515
BsaXI	ACNNNNNCTCC	8 cut(s)	95, 125, 527, 557, 683, 713, 838, 868
Bsc4I	CCNNNNNNNGG	5 cut(s)	224, 501, 515, 643, 710
Bse118I	RCCGGY	1 cut(s)	562
Bse1I	ACTGG	2 cut(s)	331, 848
Bse3DI	GCAATG	1 cut(s)	600
BseBI	CCWGG	2 cut(s)	516, 827
BseCI	ATCGAT	2 cut(s)	468, 666
BseDI	CCNNGG	1 cut(s)	515
BseGI	GGATG	3 cut(s)	305, 762, 796
BseLI	CCNNNNNNNGG	5 cut(s)	224, 501, 515, 643, 710
BseMI	GCAATG	1 cut(s)	600
BseMII	CTCAG	4 cut(s)	175, 581, 743, 773
BseNI	ACTGG	2 cut(s)	331, 848
BseRI	GAGGAG	5 cut(s)	100, 103, 328, 692, 862
BseSI	GKGCMC	2 cut(s)	509, 704
BseXI	GCAGC	3 cut(s)	777, 848, 954
BseYI	CCCAGC	1 cut(s)	857
Bsh1236I	CGCG	1 cut(s)	122
Bsh1285I	CGRYCG	3 cut(s)	126, 142, 420
BshFI	GGCC	1 cut(s)	330
BshNI	GGYRCC	2 cut(s)	402, 504
BshVI	ATCGAT	2 cut(s)	468, 666
BsiEI	CGRYCG	3 cut(s)	126, 142, 420
BsiHKAI	GWGCWC	1 cut(s)	730
BsiHKCI	CYCGRG	3 cut(s)	398, 539, 614
BsiSI	CCGG	3 cut(s)	309, 327, 563
BslFI	GGGAC	1 cut(s)	840
BslI	CCNNNNNNNGG	5 cut(s)	224, 501, 515, 643, 710
BsmAI	GTCTC	2 cut(s)	222, 935
BsmBI	CGTCTC	1 cut(s)	222
BsmFI	GGGAC	1 cut(s)	840
BsmI	GAATGC	1 cut(s)	984
BsnI	GGCC	1 cut(s)	330
BsoBI	CYCGRG	3 cut(s)	398, 539, 614
Bsp119I	TTCGAA	1 cut(s)	46
Bsp1286I	GDGCHC	4 cut(s)	509, 540, 704, 730
Bsp143I	GATC	7 cut(s)	123, 139, 164, 417, 456, 663, 917
BspACI	CCGC	3 cut(s)	120, 550, 704
BspANI	GGCC	1 cut(s)	330
BspCNI	CTCAG	4 cut(s)	174, 580, 742, 774
BspDI	ATCGAT	2 cut(s)	468, 666
BspFNI	CGCG	1 cut(s)	122
BspLI	GGNNCC	5 cut(s)	313, 404, 506, 537, 824
BspMAI	CTGCAG	1 cut(s)	972
BspMI	ACCTGC	2 cut(s)	900, 961
BspPI	GGATC	1 cut(s)	925
BspT104I	TTCGAA	1 cut(s)	46
BspT107I	GGYRCC	2 cut(s)	402, 504
BsrBI	CCGCTC	1 cut(s)	552
BsrDI	GCAATG	1 cut(s)	600
BsrFI	RCCGGY	1 cut(s)	562
BsrI	ACTGG	2 cut(s)	331, 848
BssAI	RCCGGY	1 cut(s)	562
BssECI	CCNNGG	1 cut(s)	515
BssMI	GATC	7 cut(s)	123, 139, 164, 417, 456, 663, 917
BssNI	GRCGYC	1 cut(s)	81
Bst2UI	CCWGG	2 cut(s)	516, 827
Bst4CI	ACNGT	2 cut(s)	58, 366
BstACI	GRCGYC	1 cut(s)	81
BstBI	TTCGAA	1 cut(s)	46
BstC8I	GCNNGC	2 cut(s)	564, 704
BstDEI	CTNAG	4 cut(s)	161, 567, 729, 782
BstENI	CCTNNNNNAGG	1 cut(s)	513
BstF5I	GGATG	3 cut(s)	305, 762, 796
BstFNI	CGCG	1 cut(s)	122
BstHHI	GCGC	2 cut(s)	386, 832
BstKTI	GATC	7 cut(s)	126, 142, 167, 420, 459, 666, 920
BstMAI	GTCTC	2 cut(s)	222, 935
BstMBI	GATC	7 cut(s)	123, 139, 164, 417, 456, 663, 917
BstMCI	CGRYCG	3 cut(s)	126, 142, 420
BstMWI	GCNNNNNNNGC	1 cut(s)	703
BstNI	CCWGG	2 cut(s)	516, 827
BstNSI	RCATGY	2 cut(s)	752, 868
BstSCI	CCNGG	4 cut(s)	308, 325, 514, 825
BstSFI	CTRYAG	1 cut(s)	968
BstSLI	GKGCMC	2 cut(s)	509, 704
BstUI	CGCG	1 cut(s)	122
BstV1I	GCAGC	3 cut(s)	777, 848, 954
BstX2I	RGATCY	1 cut(s)	917
BstYI	RGATCY	1 cut(s)	917
Bsu15I	ATCGAT	2 cut(s)	468, 666
BsuI	GTATCC	1 cut(s)	328
BsuRI	GGCC	1 cut(s)	330
BsuTUI	ATCGAT	2 cut(s)	468, 666
BtsCI	GGATG	3 cut(s)	305, 762, 796
BtsI	GCAGTG	1 cut(s)	704
BtsIMutI	CAGTG	2 cut(s)	704, 737
BveI	ACCTGC	2 cut(s)	900, 961
Cac8I	GCNNGC	2 cut(s)	564, 704
CaiI	CAGNNNCTG	1 cut(s)	781
CfoI	GCGC	2 cut(s)	386, 832
Cfr10I	RCCGGY	1 cut(s)	562
Cfr13I	GGNCC	1 cut(s)	312
ClaI	ATCGAT	2 cut(s)	468, 666
CseI	GACGC	1 cut(s)	83
Csp6I	GTAC	4 cut(s)	188, 403, 544, 1005
CviAII	CATG	4 cut(s)	434, 749, 865, 901
CviQI	GTAC	4 cut(s)	188, 403, 544, 1005
DdeI	CTNAG	4 cut(s)	161, 567, 729, 782
DpnI	GATC	7 cut(s)	125, 141, 166, 419, 458, 665, 919
DpnII	GATC	7 cut(s)	123, 139, 164, 417, 456, 663, 917
DrdI	GACNNNNNNGTC	1 cut(s)	80
DseDI	GACNNNNNNGTC	1 cut(s)	80
EaeI	YGGCCR	1 cut(s)	328
Eco24I	GRGCYC	1 cut(s)	540
Eco47I	GGWCC	1 cut(s)	312
Eco88I	CYCGRG	3 cut(s)	398, 539, 614
EcoNI	CCTNNNNNAGG	1 cut(s)	513
EcoRI	GAATTC	1 cut(s)	48
EcoRII	CCWGG	2 cut(s)	514, 825
EcoT22I	ATGCAT	1 cut(s)	986
EcoT38I	GRGCYC	1 cut(s)	540
Esp3I	CGTCTC	1 cut(s)	222
FaeI	CATG	4 cut(s)	437, 752, 868, 904
FaqI	GGGAC	1 cut(s)	840
FatI	CATG	4 cut(s)	433, 748, 864, 900
FauI	CCCGC	2 cut(s)	127, 711
FbaI	TGATCA	1 cut(s)	456
FblI	GTMKAC	1 cut(s)	60
Fnu4HI	GCNGC	4 cut(s)	550, 766, 862, 968
FokI	GGATG	3 cut(s)	292, 769, 803
FriOI	GRGCYC	1 cut(s)	540
Fsp4HI	GCNGC	4 cut(s)	550, 766, 862, 968
GlaI	GCGC	2 cut(s)	385, 831
GluI	GCNGC	4 cut(s)	550, 766, 862, 968
GsaI	CCCAGC	1 cut(s)	861
GsuI	CTGGAG	3 cut(s)	554, 865, 906
HaeIII	GGCC	1 cut(s)	330
HapII	CCGG	3 cut(s)	309, 327, 563
HgaI	GACGC	1 cut(s)	83
HhaI	GCGC	2 cut(s)	386, 832
Hin1I	GRCGYC	1 cut(s)	81
Hin1II	CATG	4 cut(s)	437, 752, 868, 904
Hin6I	GCGC	2 cut(s)	384, 830
HinP1I	GCGC	2 cut(s)	384, 830
HincII	GTYRAC	1 cut(s)	61
HindII	GTYRAC	1 cut(s)	61
HinfI	GANTC	7 cut(s)	97, 241, 247, 255, 344, 470, 692
HpaII	CCGG	3 cut(s)	309, 327, 563
HphI	GGTGA	3 cut(s)	46, 343, 697
Hpy166II	GTNNAC	2 cut(s)	61, 303
Hpy188III	TCNNGA	4 cut(s)	421, 644, 754, 923
Hpy8I	GTNNAC	2 cut(s)	61, 303
Hpy99I	CGWCG	9 cut(s)	62, 65, 68, 77, 140, 215, 236, 239, 392
HpyCH4III	ACNGT	2 cut(s)	58, 366
HpyCH4IV	ACGT	1 cut(s)	81
HpyCH4V	TGCA	8 cut(s)	429, 522, 735, 765, 864, 909, 970, 984
HpyF10VI	GCNNNNNNNGC	1 cut(s)	703
HpyF3I	CTNAG	4 cut(s)	161, 567, 729, 782
HpySE526I	ACGT	1 cut(s)	81
Hsp92I	GRCGYC	1 cut(s)	81
Hsp92II	CATG	4 cut(s)	437, 752, 868, 904
HspAI	GCGC	2 cut(s)	384, 830
KpnI	GGTACC	1 cut(s)	406
KroI	GCCGGC	1 cut(s)	562
KroNI	GCCGGC	1 cut(s)	564
Ksp22I	TGATCA	1 cut(s)	456
Kzo9I	GATC	7 cut(s)	123, 139, 164, 417, 456, 663, 917
LmnI	GCTCC	5 cut(s)	113, 449, 483, 535, 899
Lsp1109I	GCAGC	3 cut(s)	777, 848, 954
LweI	GCATC	2 cut(s)	58, 592
MaeII	ACGT	1 cut(s)	81
MaeIII	GTNAC	1 cut(s)	990
MalI	GATC	7 cut(s)	125, 141, 166, 419, 458, 665, 919
MbiI	CCGCTC	1 cut(s)	552
MboI	GATC	7 cut(s)	123, 139, 164, 417, 456, 663, 917
MboII	GAAGA	3 cut(s)	79, 300, 818
MfeI	CAATTG	1 cut(s)	995
MflI	RGATCY	1 cut(s)	917
MhlI	GDGCHC	4 cut(s)	509, 540, 704, 730
MluCI	AATT	7 cut(s)	42, 48, 424, 498, 626, 962, 995
MlyI	GAGTC	1 cut(s)	701
MmeI	TCCRAC	2 cut(s)	234, 600
Mph1103I	ATGCAT	1 cut(s)	986
MroNI	GCCGGC	1 cut(s)	562
MspA1I	CMGCKG	1 cut(s)	861
MspI	CCGG	3 cut(s)	309, 327, 563
MspR9I	CCNGG	4 cut(s)	310, 327, 516, 827
MunI	CAATTG	1 cut(s)	995
Mva1269I	GAATGC	1 cut(s)	984
MvaI	CCWGG	2 cut(s)	516, 827
MvnI	CGCG	1 cut(s)	122
MwoI	GCNNNNNNNGC	1 cut(s)	703
NaeI	GCCGGC	1 cut(s)	564
NciI	CCSGG	2 cut(s)	310, 327
NdeII	GATC	7 cut(s)	123, 139, 164, 417, 456, 663, 917
NgoMIV	GCCGGC	1 cut(s)	562
NlaIII	CATG	4 cut(s)	437, 752, 868, 904
NlaIV	GGNNCC	5 cut(s)	313, 404, 506, 537, 824
NsiI	ATGCAT	1 cut(s)	986
NspI	RCATGY	2 cut(s)	752, 868
NspV	TTCGAA	1 cut(s)	46
PaqCI	CACCTGC	2 cut(s)	900, 961
PcsI	WCGNNNNNNNCGW	5 cut(s)	69, 132, 207, 231, 250
PctI	GAATGC	1 cut(s)	984
PdiI	GCCGGC	1 cut(s)	564
PfeI	GAWTC	6 cut(s)	97, 241, 247, 255, 344, 470
PkrI	GCNGC	4 cut(s)	551, 767, 863, 969
Ple19I	CGATCG	3 cut(s)	126, 142, 420
PleI	GAGTC	1 cut(s)	700
PpsI	GAGTC	1 cut(s)	700
Psp6I	CCWGG	2 cut(s)	514, 825
PspFI	CCCAGC	1 cut(s)	857
PspGI	CCWGG	2 cut(s)	514, 825
PspN4I	GGNNCC	5 cut(s)	313, 404, 506, 537, 824
PspPI	GGNCC	1 cut(s)	312
PstI	CTGCAG	1 cut(s)	972
PstNI	CAGNNNCTG	1 cut(s)	781
PsuI	RGATCY	1 cut(s)	917
PvuI	CGATCG	3 cut(s)	126, 142, 420
PvuII	CAGCTG	1 cut(s)	861
RgaI	GCGATCGC	1 cut(s)	126
RsaI	GTAC	4 cut(s)	189, 404, 545, 1006
RsaNI	GTAC	4 cut(s)	188, 403, 544, 1005
SalI	GTCGAC	1 cut(s)	59
SatI	GCNGC	4 cut(s)	550, 766, 862, 968
Sau3AI	GATC	7 cut(s)	123, 139, 164, 417, 456, 663, 917
Sau96I	GGNCC	1 cut(s)	312
ScaI	AGTACT	1 cut(s)	545
SchI	GAGTC	1 cut(s)	701
ScrFI	CCNGG	4 cut(s)	310, 327, 516, 827
SduI	GDGCHC	4 cut(s)	509, 540, 704, 730
SfaAI	GCGATCGC	1 cut(s)	126
SfaNI	GCATC	2 cut(s)	58, 592
SfcI	CTRYAG	1 cut(s)	968
SfuI	TTCGAA	1 cut(s)	46
SgfI	GCGATCGC	1 cut(s)	126
SgrDI	CGTCGACG	1 cut(s)	59
SinI	GGWCC	1 cut(s)	312
Sse9I	AATT	7 cut(s)	42, 48, 424, 498, 626, 962, 995
SsiI	CCGC	3 cut(s)	120, 550, 704
StyD4I	CCNGG	4 cut(s)	308, 325, 514, 825
TaaI	ACNGT	2 cut(s)	58, 366
TaiI	ACGT	1 cut(s)	84
TaqI	TCGA	8 cut(s)	46, 60, 201, 420, 468, 666, 876, 1028
TasI	AATT	7 cut(s)	42, 48, 424, 498, 626, 962, 995
TatI	WGTACW	2 cut(s)	543, 1004
TauI	GCSGC	1 cut(s)	552
TfiI	GAWTC	6 cut(s)	97, 241, 247, 255, 344, 470
TscAI	CASTG	2 cut(s)	704, 737
TseI	GCWGC	3 cut(s)	765, 861, 967
TspDTI	ATGAA	2 cut(s)	819, 917
TspGWI	ACGGA	2 cut(s)	240, 304
TspRI	CASTG	2 cut(s)	704, 737
VpaK11BI	GGWCC	1 cut(s)	312
XagI	CCTNNNNNAGG	1 cut(s)	513
XapI	RAATTY	2 cut(s)	48, 626
XceI	RCATGY	2 cut(s)	752, 868
XmiI	GTMKAC	1 cut(s)	60
ZraI	GACGTC	1 cut(s)	82
ZrmI	AGTACT	1 cut(s)	545
Zsp2I	ATGCAT	1 cut(s)	986

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.