Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0003203

Physical Location & Seq

Genomic Coordinates Forward (+)

8527265 .. 8530563

Gene Structure 3299 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0100400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2031 bp

ATGATGAAGAACTATCACCAGATGAAAAAGGGTGCAGAACGACTCAAGGAAATCGGTGCCGTACTGCGTAGCCTCAATTCAATCTTACGTAAACTCTCACTAAGCAGGAAAATAACCAAGTCTCTGTCGCCGTCTCAGCCTCTGATGTTGGAGAACCAACCCCATCATCATCACACCGTTGATCACGATCACGATCACATGAACCCCCTAATCTTCTCCAATGGACAATCTTCCACTAGTACTAGTTTTGATATTCCCAGTAGTACTTTCATATGTGGTTTGTGTCTTAAGCGTATTCAACTCGAAGACTCATTCGACTTCAAGGGCTGTCCCCATTTTTATTGTACTCCATGCATTGTGAACTTTGTAGTCTCCAAGCTCCAAGACAATGCCGATTGGGCTCTGCAATGCCCTGTGCCAACCTGCACCGGAACACTAGACCCTGACTACTGCCGGCCAATCCTTCCGAGGCAGGTTTTTGATTCGTGGACGAATGCATTGTGTGATCAGATTGAGCAATCTTCTTATGGTGCCGAAAGCAGTAATAGTGGTACTACTTTTACATGTGATTTTTGTGTTGAGGAAAAGCATCTGAGTGACTCGTTGAGTGTCAAAGATTGCAGCCATTTTTACTGCCATCAATGCATCGTCAATTTTGTGGTGTCAAAGCTGGAGGACAATGTGACCTCCATTGTGTGCCCCGAGCCGGGCTGCAGAGGAGTGCTAGACCTGCAGTACTGTCAGCCAATTCTCCCGAAAGATGTTCTTGATTGGTGGGGGAAGGCCTTGTGTGAAAATGTGATTTTGGGGTCGGAGAACAATGACAAGTATTTCTACTGTCCCTTCAAGGATTGCTCGGCACTGCTGGTTGTTGATGATCCGGAGGATGAGCATGACATATACAAGTCTCGGTGTCCTCATTGCAAGAGAGAGGTTTGCTTGAATTGCAAGGTTCCTTGGCATACGGAGTTCAACTGCGACAAGTTTCAGAAATTGAGAGACAAGGGTGAAGATGAGATGGTGAAGGAGCTTGCCAAGAAAAAGAAGTGGAGGAAGTGCCCAAAATGCAACTACTATGTTGAGAAAAAAGAGGGGTGCACTTACATTAAATGCAGGTGTAGGCATGCTTTCTGTTACAACTGTGGAATAGCAGCTGCCGTTGATGATGTTTATATAAAGGTCACTTTAGGCCCGGAAAGGATGGGTATTCTTAAGAGCGTGAAAACTTTAGGAACACTGAAGGGTATGAAGAAAATTGGCAGAGAAGTGGGTAAGATCATCCCTACGAGTAGAAAAGTACACGTGGAACAAACTCTGGCTTCGGTTAACAATTTCGACCCCAAATATTATGATGATACTAAAGATCTCATGACCCCGCTACTGTCGAGCAACAAGAACGGAAAATCTTCTGATCCTGAAAGCTGTAGAAGCGATAGTTCTAGTACGAGTTCAGTGGAGAGTAGTACTAATGCTAATGATCCAAGTACTACTTTTATTTGTGATATCTGTGTTAAGCCAACTCATCTGAAAGATTCACTCGACGTTGTGGGTTGCAACCATTTTTATTGTCGGCAATGCATTGTGGATTTTGTATTGTCCAAGCTCGAAGACAATGTCACATCCATTGTATGCCCTGAAGCAGGCTGCAGAGGAGTGTTAGAACCCGAGTACTGTCGTCCAATCCTCCCAAACAATGTCTTTGATCGGTGGGTCAACGCCTCACATGATCATAATGGGCAGCCTTCTGACGCTGACATCGACGGTAGTAGTCCTAGTACTTCTACATGTGATTTCTGTGCTGAACCAGTTCATCTGGAGGACTCATTGGACGTCAAGGGTTGCAATCATTTTTACTGTCGACAATGCATTGTTGATTTCGTATCGTCCAAGCTCGAAGACAACGTCACGTCCATTATGTGCCCTGAAGCAGGCTGCATTGGAGTGCTAGACCCTGAGTACTGTCGTCCAATCCTTCCGAACGAGGTCTTTGATTGGTGGGAGACTGCCTTACAAAGTCAAAATGAGCATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000149 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006810 GO:0006887 GO:0006906 GO:0006950 GO:0006996 GO:0008150 GO:0009266 GO:0009409 GO:0009628 GO:0009987 GO:0012505 GO:0016020 GO:0016021 GO:0016043 GO:0016050 GO:0016192 GO:0022406 GO:0031201 GO:0031224 GO:0032940 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0046903 GO:0048278 GO:0048284 GO:0050896 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0061024 GO:0061025 GO:0071840 GO:0071944 GO:0090174 GO:0098796 GO:0140056

KEGG Pathways

Metabolic & Signaling

ko00770 ko01100 ko04130 ko04721 map00770 map01100 map04130 map04721

Pfam Domains

Protein Families

CTP_transf_like SNARE Syntaxin

Protein Analysis

676

Amino Acids

76.25

Weight (kDa)

5.74

Isoelectric Point (pI)

40.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IBR	PF01485	272 - 326	3.1e-09	IBR domain, a half RING-finger domain
IBR	PF01485	340 - 382	5.1e-08	IBR domain, a half RING-finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003203)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18260 AT2G18260
fragaria_vesca	FvH4_1g13020 FvH4_2g09080 FvH4_2g09080
malus_domestica	MD02G1144800.v1.1 MD05G1064700.v1.1 MD15G1259000.v1.1
prunus_persica	Prupe.7G156800_v2.0.a1 Prupe.8G094700_v2.0.a1 Prupe.8G094700_v2.0.a1
pyrus_communis	pycom02g11470 pycom05g05560 pycom15g22740
rosa_chinensis	RchiOBHm_Chr2g0101181 RchiOBHm_Chr6g0264961
rosa_laevigata	RLG00000014227 RLG00000017053
rosa_multiflora	Rmu_co8052262.1_g000001 Rmu_sc0002934.1_g000038 Rmu_sc0006314.1_g000005
rosa_roxburghii	Rroxscaffold_175G00432060 Rroxscaffold_2G00141520 Rroxscaffold_7G00203130
rosa_rugosa	Rorug02G0100400 Rorug02G0100500 Rorug06G0014100
rosa_samantha	Rh2AG144200 Rh2BG149200 Rh2CG150500 Rh2DG149700 Rh6AG135300 Rh6BG132700 Rh6CG131400 Rh6DG118400
rosa_wichuraiana	Rw2G011300 Rw6G011690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1104
AatII	GACGTC	1 cut(s)	1833
Acc36I	ACCTGC	4 cut(s)	431, 463, 738, 1104
AccB1I	GGYRCC	2 cut(s)	56, 530
AccI	GTMKAC	1 cut(s)	1858
AccIII	TCCGGA	1 cut(s)	880
AciI	CCGC	1 cut(s)	1376
AclWI	GGATC	3 cut(s)	872, 1406, 1472
AcoI	YGGCCR	1 cut(s)	455
AcuI	CTGAAG	3 cut(s)	1259, 1656, 1944
AcvI	CACGTG	1 cut(s)	1303
AcyI	GRCGYC	1 cut(s)	1830
AfiI	CCNNNNNNNGG	4 cut(s)	706, 707, 1640, 1928
AflII	CTTAAG	2 cut(s)	287, 1211
AflIII	ACRYGT	3 cut(s)	563, 1300, 1784
AgsI	TTSAA	6 cut(s)	81, 299, 322, 847, 943, 973
AhlI	ACTAGT	2 cut(s)	236, 242
AjiI	CACGTC	1 cut(s)	1908
AluBI	AGCT	7 cut(s)	379, 670, 1030, 1154, 1422, 1603, 1891
AluI	AGCT	7 cut(s)	379, 670, 1030, 1154, 1422, 1603, 1891
Alw21I	GWGCWC	1 cut(s)	1100
Alw26I	GTCTC	6 cut(s)	126, 138, 376, 912, 993, 1994
Alw44I	GTGCAC	1 cut(s)	1096
AlwI	GGATC	3 cut(s)	872, 1406, 1472
AlwNI	CAGNNNCTG	1 cut(s)	142
Ama87I	CYCGRG	2 cut(s)	701, 1664
Aor13HI	TCCGGA	1 cut(s)	880
AoxI	GGCC	3 cut(s)	455, 783, 1189
ApaLI	GTGCAC	1 cut(s)	1096
ApeKI	GCWGC	7 cut(s)	621, 711, 1151, 1154, 1644, 1738, 1932
ArsI	GACNNNNNNTTYG	4 cut(s)	1599, 1631, 1887, 1919
Asp700I	GAANNNNTTC	2 cut(s)	1405, 1806
AspS9I	GGNCC	1 cut(s)	1190
AsuC2I	CCSGG	2 cut(s)	708, 1193
AsuHPI	GGTGA	3 cut(s)	8, 1019, 1033
AvaI	CYCGRG	2 cut(s)	701, 1664
BaeGI	GKGCMC	4 cut(s)	701, 1061, 1100, 1922
BanI	GGYRCC	2 cut(s)	56, 530
BanII	GRGCYC	1 cut(s)	403
BbrPI	CACGTG	1 cut(s)	1303
BbsI	GAAGAC	3 cut(s)	312, 1614, 1902
Bbv12I	GWGCWC	1 cut(s)	1100
BbvI	GCAGC	7 cut(s)	633, 698, 1141, 1163, 1631, 1750, 1919
BccI	CCATC	4 cut(s)	171, 645, 1012, 1195
BceAI	ACGGC	3 cut(s)	44, 115, 1142
BclI	TGATCA	3 cut(s)	181, 505, 1726
BcnI	CCSGG	2 cut(s)	708, 1193
BcoDI	GTCTC	6 cut(s)	126, 138, 376, 912, 993, 1994
BcuI	ACTAGT	2 cut(s)	236, 242
BfaI	CTAG	7 cut(s)	237, 243, 437, 725, 1440, 1773, 1946
BfmI	CTRYAG	4 cut(s)	712, 731, 1423, 1645
BfrI	CTTAAG	2 cut(s)	287, 1211
BfuAI	ACCTGC	4 cut(s)	431, 463, 738, 1104
BglI	GCCNNNNNGGC	1 cut(s)	398
BglII	AGATCT	1 cut(s)	1363
BisI	GCNGC	7 cut(s)	622, 712, 1152, 1155, 1645, 1739, 1933
BlsI	GCNGC	7 cut(s)	623, 713, 1153, 1156, 1646, 1740, 1934
BmcAI	AGTACT	8 cut(s)	241, 265, 737, 1465, 1486, 1670, 1777, 1958
Bme1390I	CCNGG	2 cut(s)	708, 1193
BmeT110I	CYCGRG	2 cut(s)	701, 1664
BmgBI	CACGTC	1 cut(s)	1908
BmgT120I	GGNCC	1 cut(s)	1190
BmiI	GGNNCC	3 cut(s)	58, 532, 954
BmrFI	CCNGG	2 cut(s)	708, 1193
BmrI	ACTGGG	1 cut(s)	252
BmsI	GCATC	2 cut(s)	598, 654
BmuI	ACTGGG	1 cut(s)	252
BpiI	GAAGAC	3 cut(s)	312, 1614, 1902
BpmI	CTGGAG	2 cut(s)	692, 1835
BpuEI	CTTGAG	1 cut(s)	29
BpuMI	CCSGG	2 cut(s)	708, 1193
BsaAI	YACGTR	2 cut(s)	89, 1303
BsaBI	GATNNNNATC	2 cut(s)	186, 192
BsaHI	GRCGYC	1 cut(s)	1830
BsaJI	CCNNGG	2 cut(s)	467, 956
BsaWI	WCCGGW	2 cut(s)	428, 880
Bsc4I	CCNNNNNNNGG	4 cut(s)	706, 707, 1640, 1928
Bse118I	RCCGGY	1 cut(s)	453
Bse1I	ACTGG	2 cut(s)	258, 1805
Bse3DI	GCAATG	3 cut(s)	413, 919, 1580
Bse8I	GATNNNNATC	2 cut(s)	186, 192
BseAI	TCCGGA	1 cut(s)	880
BseDI	CCNNGG	2 cut(s)	467, 956
BseGI	GGATG	4 cut(s)	892, 1206, 1278, 1619
BseJI	GATNNNNATC	2 cut(s)	186, 192
BseLI	CCNNNNNNNGG	4 cut(s)	706, 707, 1640, 1928
BseMI	GCAATG	3 cut(s)	413, 919, 1580
BseMII	CTCAG	3 cut(s)	149, 584, 1944
BseNI	ACTGG	2 cut(s)	258, 1805
BseRI	GAGGAG	2 cut(s)	732, 1665
BseSI	GKGCMC	4 cut(s)	701, 1061, 1100, 1922
BseXI	GCAGC	7 cut(s)	633, 698, 1141, 1163, 1631, 1750, 1919
BsgI	GTGCAG	2 cut(s)	54, 409
BshFI	GGCC	3 cut(s)	457, 785, 1191
BshNI	GGYRCC	2 cut(s)	56, 530
BsiHKAI	GWGCWC	1 cut(s)	1100
BsiHKCI	CYCGRG	2 cut(s)	701, 1664
BsiSI	CCGG	5 cut(s)	429, 454, 707, 881, 1193
BslFI	GGGAC	2 cut(s)	315, 825
BslI	CCNNNNNNNGG	4 cut(s)	706, 707, 1640, 1928
BsmAI	GTCTC	6 cut(s)	126, 138, 376, 912, 993, 1994
BsmBI	CGTCTC	1 cut(s)	138
BsmFI	GGGAC	2 cut(s)	315, 825
BsmI	GAATGC	1 cut(s)	499
BsnI	GGCC	3 cut(s)	457, 785, 1191
BsoBI	CYCGRG	2 cut(s)	701, 1664
Bsp1286I	GDGCHC	5 cut(s)	403, 701, 1061, 1100, 1922
Bsp13I	TCCGGA	1 cut(s)	880
BspACI	CCGC	1 cut(s)	1376
BspANI	GGCC	3 cut(s)	457, 785, 1191
BspCNI	CTCAG	3 cut(s)	148, 585, 1945
BspEI	TCCGGA	1 cut(s)	880
BspHI	TCATGA	1 cut(s)	1368
BspLI	GGNNCC	3 cut(s)	58, 532, 954
BspMAI	CTGCAG	3 cut(s)	716, 735, 1649
BspMI	ACCTGC	4 cut(s)	431, 463, 738, 1104
BspPI	GGATC	3 cut(s)	872, 1406, 1472
BspT107I	GGYRCC	2 cut(s)	56, 530
BspTI	CTTAAG	2 cut(s)	287, 1211
BsrDI	GCAATG	3 cut(s)	413, 919, 1580
BsrFI	RCCGGY	1 cut(s)	453
BsrI	ACTGG	2 cut(s)	258, 1805
BssAI	RCCGGY	1 cut(s)	453
BssECI	CCNNGG	2 cut(s)	467, 956
BssNI	GRCGYC	1 cut(s)	1830
BssT1I	CCWWGG	1 cut(s)	956
Bst4CI	ACNGT	9 cut(s)	178, 740, 839, 1142, 1383, 1673, 1763, 1856, 1961
BstACI	GRCGYC	1 cut(s)	1830
BstAFI	CTTAAG	2 cut(s)	287, 1211
BstBAI	YACGTR	2 cut(s)	89, 1303
BstC8I	GCNNGC	5 cut(s)	455, 1032, 1125, 1642, 1930
BstDEI	CTNAG	4 cut(s)	101, 135, 593, 1953
BstENI	CCTNNNNNAGG	2 cut(s)	1638, 1926
BstF5I	GGATG	4 cut(s)	892, 1206, 1278, 1619
BstMAI	GTCTC	6 cut(s)	126, 138, 376, 912, 993, 1994
BstMWI	GCNNNNNNNGC	7 cut(s)	136, 398, 642, 730, 945, 1065, 1428
BstNSI	RCATGY	3 cut(s)	567, 1127, 1788
BstSCI	CCNGG	2 cut(s)	706, 1191
BstSFI	CTRYAG	4 cut(s)	712, 731, 1423, 1645
BstSLI	GKGCMC	4 cut(s)	701, 1061, 1100, 1922
BstSNI	TACGTA	1 cut(s)	89
BstV1I	GCAGC	7 cut(s)	633, 698, 1141, 1163, 1631, 1750, 1919
BstV2I	GAAGAC	3 cut(s)	312, 1614, 1902
BstX2I	RGATCY	1 cut(s)	1363
BstYI	RGATCY	1 cut(s)	1363
BsuRI	GGCC	3 cut(s)	457, 785, 1191
BtrI	CACGTC	1 cut(s)	1908
BtsCI	GGATG	4 cut(s)	892, 1206, 1278, 1619
BtsI	GCAGTG	1 cut(s)	860
BtsIMutI	CAGTG	3 cut(s)	860, 1235, 1458
BveI	ACCTGC	4 cut(s)	431, 463, 738, 1104
Cac8I	GCNNGC	5 cut(s)	455, 1032, 1125, 1642, 1930
CaiI	CAGNNNCTG	1 cut(s)	142
CciI	TCATGA	1 cut(s)	1368
Cfr10I	RCCGGY	1 cut(s)	453
Cfr13I	GGNCC	1 cut(s)	1190
CseI	GACGC	1 cut(s)	1757
CviAII	CATG	8 cut(s)	199, 351, 564, 893, 1124, 1369, 1724, 1785
DdeI	CTNAG	4 cut(s)	101, 135, 593, 1953
EaeI	YGGCCR	1 cut(s)	455
Eco105I	TACGTA	1 cut(s)	89
Eco130I	CCWWGG	1 cut(s)	956
Eco147I	AGGCCT	1 cut(s)	785
Eco24I	GRGCYC	1 cut(s)	403
Eco32I	GATATC	1 cut(s)	1504
Eco57I	CTGAAG	3 cut(s)	1259, 1656, 1944
Eco72I	CACGTG	1 cut(s)	1303
Eco88I	CYCGRG	2 cut(s)	701, 1664
EcoNI	CCTNNNNNAGG	2 cut(s)	1638, 1926
EcoRV	GATATC	1 cut(s)	1504
EcoT14I	CCWWGG	1 cut(s)	956
EcoT22I	ATGCAT	5 cut(s)	356, 499, 647, 1580, 1868
EcoT38I	GRGCYC	1 cut(s)	403
ErhI	CCWWGG	1 cut(s)	956
Esp3I	CGTCTC	1 cut(s)	138
FaeI	CATG	8 cut(s)	202, 354, 567, 896, 1127, 1372, 1727, 1788
FalI	AAGNNNNNCTT	4 cut(s)	750, 782, 1474, 1506
FaqI	GGGAC	2 cut(s)	315, 825
FatI	CATG	8 cut(s)	198, 350, 563, 892, 1123, 1368, 1723, 1784
FauI	CCCGC	1 cut(s)	1383
FauNDI	CATATG	1 cut(s)	272
FbaI	TGATCA	3 cut(s)	181, 505, 1726
FblI	GTMKAC	1 cut(s)	1858
Fnu4HI	GCNGC	7 cut(s)	622, 712, 1152, 1155, 1645, 1739, 1933
FokI	GGATG	4 cut(s)	899, 1213, 1265, 1606
FriOI	GRGCYC	1 cut(s)	403
Fsp4HI	GCNGC	7 cut(s)	622, 712, 1152, 1155, 1645, 1739, 1933
FspBI	CTAG	7 cut(s)	237, 243, 437, 725, 1440, 1773, 1946
GluI	GCNGC	7 cut(s)	622, 712, 1152, 1155, 1645, 1739, 1933
GsuI	CTGGAG	2 cut(s)	692, 1835
HaeIII	GGCC	3 cut(s)	457, 785, 1191
HapII	CCGG	5 cut(s)	429, 454, 707, 881, 1193
HgaI	GACGC	1 cut(s)	1757
Hin1I	GRCGYC	1 cut(s)	1830
Hin1II	CATG	8 cut(s)	202, 354, 567, 896, 1127, 1372, 1727, 1788
HincII	GTYRAC	3 cut(s)	1327, 1714, 1859
HindII	GTYRAC	3 cut(s)	1327, 1714, 1859
HinfI	GANTC	6 cut(s)	42, 308, 482, 599, 1532, 1820
HpaI	GTTAAC	1 cut(s)	1327
HpaII	CCGG	5 cut(s)	429, 454, 707, 881, 1193
HphI	GGTGA	3 cut(s)	8, 1019, 1033
Hpy166II	GTNNAC	8 cut(s)	92, 361, 489, 1098, 1300, 1327, 1714, 1859
Hpy188III	TCNNGA	8 cut(s)	185, 191, 754, 767, 881, 1369, 1415, 1814
Hpy8I	GTNNAC	8 cut(s)	92, 361, 489, 1098, 1300, 1327, 1714, 1859
Hpy99I	CGWCG	2 cut(s)	1544, 1763
HpyAV	CCTTC	7 cut(s)	473, 775, 853, 1018, 1234, 1752, 1982
HpyCH4III	ACNGT	9 cut(s)	178, 740, 839, 1142, 1383, 1673, 1763, 1856, 1961
HpyCH4IV	ACGT	6 cut(s)	88, 1302, 1542, 1830, 1902, 1907
HpyF10VI	GCNNNNNNNGC	7 cut(s)	136, 398, 642, 730, 945, 1065, 1428
HpyF3I	CTNAG	4 cut(s)	101, 135, 593, 1953
HpySE526I	ACGT	6 cut(s)	88, 1302, 1542, 1830, 1902, 1907
Hsp92I	GRCGYC	1 cut(s)	1830
Hsp92II	CATG	8 cut(s)	202, 354, 567, 896, 1127, 1372, 1727, 1788
Kpn2I	TCCGGA	1 cut(s)	880
KroI	GCCGGC	1 cut(s)	453
KroNI	GCCGGC	1 cut(s)	455
Ksp22I	TGATCA	3 cut(s)	181, 505, 1726
KspAI	GTTAAC	1 cut(s)	1327
LmnI	GCTCC	2 cut(s)	384, 1027
Lsp1109I	GCAGC	7 cut(s)	633, 698, 1141, 1163, 1631, 1750, 1919
LweI	GCATC	2 cut(s)	598, 654
MaeI	CTAG	7 cut(s)	237, 243, 437, 725, 1440, 1773, 1946
MaeII	ACGT	6 cut(s)	88, 1302, 1542, 1830, 1902, 1907
MaeIII	GTNAC	6 cut(s)	596, 682, 1133, 1180, 1615, 1903
MflI	RGATCY	1 cut(s)	1363
MhlI	GDGCHC	5 cut(s)	403, 701, 1061, 1100, 1922
MluCI	AATT	7 cut(s)	76, 652, 747, 943, 992, 1254, 1330
MlyI	GAGTC	4 cut(s)	36, 302, 593, 1814
MmeI	TCCRAC	2 cut(s)	129, 792
Mph1103I	ATGCAT	5 cut(s)	356, 499, 647, 1580, 1868
MroI	TCCGGA	1 cut(s)	880
MroNI	GCCGGC	1 cut(s)	453
MroXI	GAANNNNTTC	2 cut(s)	1405, 1806
MseI	TTAA	6 cut(s)	288, 1107, 1212, 1326, 1512, 2029
MslI	CAYNNNNRTG	2 cut(s)	594, 1940
MspA1I	CMGCKG	1 cut(s)	1154
MspCI	CTTAAG	2 cut(s)	287, 1211
MspI	CCGG	5 cut(s)	429, 454, 707, 881, 1193
MspR9I	CCNGG	2 cut(s)	708, 1193
Mva1269I	GAATGC	1 cut(s)	499
MwoI	GCNNNNNNNGC	7 cut(s)	136, 398, 642, 730, 945, 1065, 1428
NaeI	GCCGGC	1 cut(s)	455
NciI	CCSGG	2 cut(s)	708, 1193
NdeI	CATATG	1 cut(s)	272
NgoMIV	GCCGGC	1 cut(s)	453
NlaIII	CATG	8 cut(s)	202, 354, 567, 896, 1127, 1372, 1727, 1788
NlaIV	GGNNCC	3 cut(s)	58, 532, 954
NmeAIII	GCCGAG	1 cut(s)	836
NmuCI	GTSAC	5 cut(s)	596, 682, 1180, 1615, 1903
NsiI	ATGCAT	5 cut(s)	356, 499, 647, 1580, 1868
NspI	RCATGY	3 cut(s)	567, 1127, 1788
PaeI	GCATGC	1 cut(s)	1127
PagI	TCATGA	1 cut(s)	1368
PaqCI	CACCTGC	1 cut(s)	1104
PceI	AGGCCT	1 cut(s)	785
PciI	ACATGT	2 cut(s)	563, 1784
PcsI	WCGNNNNNNNCGW	2 cut(s)	1755, 1899
PctI	GAATGC	1 cut(s)	499
PdiI	GCCGGC	1 cut(s)	455
PdmI	GAANNNNTTC	2 cut(s)	1405, 1806
PfeI	GAWTC	2 cut(s)	482, 1532
PflFI	GACNNNGTC	2 cut(s)	1613, 1901
PkrI	GCNGC	7 cut(s)	623, 713, 1153, 1156, 1646, 1740, 1934
PleI	GAGTC	4 cut(s)	36, 302, 593, 1814
PmaCI	CACGTG	1 cut(s)	1303
PmlI	CACGTG	1 cut(s)	1303
PpsI	GAGTC	4 cut(s)	36, 302, 593, 1814
Ppu21I	YACGTR	2 cut(s)	89, 1303
PscI	ACATGT	2 cut(s)	563, 1784
PspCI	CACGTG	1 cut(s)	1303
PspN4I	GGNNCC	3 cut(s)	58, 532, 954
PspPI	GGNCC	1 cut(s)	1190
PstI	CTGCAG	3 cut(s)	716, 735, 1649
PstNI	CAGNNNCTG	1 cut(s)	142
PsuI	RGATCY	1 cut(s)	1363
PsyI	GACNNNGTC	2 cut(s)	1613, 1901
PvuII	CAGCTG	1 cut(s)	1154
RseI	CAYNNNNRTG	2 cut(s)	594, 1940
SalI	GTCGAC	1 cut(s)	1857
SaqAI	TTAA	6 cut(s)	288, 1107, 1212, 1326, 1512, 2029
SatI	GCNGC	7 cut(s)	622, 712, 1152, 1155, 1645, 1739, 1933
Sau96I	GGNCC	1 cut(s)	1190
ScaI	AGTACT	8 cut(s)	241, 265, 737, 1465, 1486, 1670, 1777, 1958
SchI	GAGTC	4 cut(s)	36, 302, 593, 1814
ScrFI	CCNGG	2 cut(s)	708, 1193
SduI	GDGCHC	5 cut(s)	403, 701, 1061, 1100, 1922
SfaNI	GCATC	2 cut(s)	598, 654
SfcI	CTRYAG	4 cut(s)	712, 731, 1423, 1645
SmiMI	CAYNNNNRTG	2 cut(s)	594, 1940
SmlI	CTYRAG	3 cut(s)	44, 287, 1211
SmoI	CTYRAG	3 cut(s)	44, 287, 1211
SnaBI	TACGTA	1 cut(s)	89
SpeI	ACTAGT	2 cut(s)	236, 242
SphI	GCATGC	1 cut(s)	1127
Sse9I	AATT	7 cut(s)	76, 652, 747, 943, 992, 1254, 1330
SseBI	AGGCCT	1 cut(s)	785
SsiI	CCGC	1 cut(s)	1376
SspI	AATATT	1 cut(s)	1346
SspMI	CTAG	7 cut(s)	237, 243, 437, 725, 1440, 1773, 1946
StuI	AGGCCT	1 cut(s)	785
StyD4I	CCNGG	2 cut(s)	706, 1191
StyI	CCWWGG	1 cut(s)	956
TaaI	ACNGT	9 cut(s)	178, 740, 839, 1142, 1383, 1673, 1763, 1856, 1961
TaiI	ACGT	6 cut(s)	91, 1305, 1545, 1833, 1905, 1910
TaqI	TCGA	9 cut(s)	303, 315, 1335, 1385, 1539, 1605, 1758, 1858, 1893
TasI	AATT	7 cut(s)	76, 652, 747, 943, 992, 1254, 1330
TfiI	GAWTC	2 cut(s)	482, 1532
Tru1I	TTAA	6 cut(s)	288, 1107, 1212, 1326, 1512, 2029
Tru9I	TTAA	6 cut(s)	288, 1107, 1212, 1326, 1512, 2029
TscAI	CASTG	3 cut(s)	867, 1242, 1458
TseFI	GTSAC	5 cut(s)	596, 682, 1180, 1615, 1903
TseI	GCWGC	7 cut(s)	621, 711, 1151, 1154, 1644, 1738, 1932
Tsp45I	GTSAC	5 cut(s)	596, 682, 1180, 1615, 1903
TspDTI	ATGAA	6 cut(s)	20, 38, 215, 259, 1262, 1799
TspGWI	ACGGA	2 cut(s)	980, 1413
TspRI	CASTG	3 cut(s)	867, 1242, 1458
Tth111I	GACNNNGTC	2 cut(s)	1613, 1901
Vha464I	CTTAAG	2 cut(s)	287, 1211
VneI	GTGCAC	1 cut(s)	1096
XagI	CCTNNNNNAGG	2 cut(s)	1638, 1926
XceI	RCATGY	3 cut(s)	567, 1127, 1788
XmiI	GTMKAC	1 cut(s)	1858
XmnI	GAANNNNTTC	2 cut(s)	1405, 1806
XspI	CTAG	7 cut(s)	237, 243, 437, 725, 1440, 1773, 1946
ZraI	GACGTC	1 cut(s)	1831
ZrmI	AGTACT	8 cut(s)	241, 265, 737, 1465, 1486, 1670, 1777, 1958
Zsp2I	ATGCAT	5 cut(s)	356, 499, 647, 1580, 1868

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.