pycom15g22630

Coenzyme A synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0005019
Physical Location & Seq
Forward (+)
16698932 .. 16700636
1705 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 519 bp
ATGGCGACTTCTGATGTTATGGCGAATTACAAGCTCTCTCCGCCGAATACTTATGGAGCCGTGGTTCTTGGCGGCACCTTCGACCGCTTACACAACGGCCATCGATATTTTCTCAAGGCCGCGACGGACTTGGCTAGGGATCGAGTTGTGGTTGGAATTTGCGACGGACCTATGTTGGCCAACAAACAGTTTGCTGAGTTGATACAACCCGTTGAGGAAAGGATGAATAATGTTGAAAATTACCTCAAGTCTATCACGCAGTCGCTTGAAGTGCAAGTTCAACCTATTACGGATCCCTATGGCCCTGCAATAGTTGATGAGAATCTGGAGGCAATTGTTGTCAGCAAGGAGGCGCTAGACGGCGGACTGTCTGTTAATAAGAAGAGAGCTGAGGAAGGCCTTCCGCAGCTTAAGATTGAAGTTGTAGATCTGTATTCTGGATCCGGCGGAGATAGGCCGAGTTCATCATCGTTGAGGAAGCGTGAGGCGGAGAAGGCCAAGAACTACCAGCCAGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001667 GO:0002009 GO:0002064 GO:0002065 GO:0002066 GO:0002165 GO:0003006 GO:0003674 GO:0003824 GO:0004140 GO:0004595 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005739 GO:0005740 GO:0005741 GO:0005759 GO:0005829 GO:0006139 GO:0006140 GO:0006163 GO:0006164 GO:0006629 GO:0006725 GO:0006732 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006928 GO:0006950 GO:0006970 GO:0007275 GO:0007276 GO:0007281 GO:0007292 GO:0007297 GO:0007300 GO:0007303 GO:0007444 GO:0007472 GO:0007476 GO:0007552 GO:0007560 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009259 GO:0009260 GO:0009628 GO:0009651 GO:0009653 GO:0009791 GO:0009886 GO:0009887 GO:0009888 GO:0009889 GO:0009987 GO:0010631 GO:0010876 GO:0015936 GO:0015937 GO:0016020 GO:0016301 GO:0016310 GO:0016477 GO:0016482 GO:0016740 GO:0016772 GO:0016773 GO:0016779 GO:0018130 GO:0019219 GO:0019220 GO:0019222 GO:0019438 GO:0019637 GO:0019693 GO:0019867 GO:0019915 GO:0019953 GO:0022412 GO:0022414 GO:0030154 GO:0030707 GO:0030808 GO:0030855 GO:0031090 GO:0031323 GO:0031326 GO:0031966 GO:0031967 GO:0031968 GO:0031974 GO:0031975 GO:0031981 GO:0032501 GO:0032502 GO:0032504 GO:0032991 GO:0033036 GO:0033865 GO:0033866 GO:0033875 GO:0034030 GO:0034032 GO:0034033 GO:0034641 GO:0034654 GO:0035107 GO:0035114 GO:0035120 GO:0035220 GO:0035239 GO:0035295 GO:0040007 GO:0040011 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044428 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0044703 GO:0046390 GO:0046483 GO:0046907 GO:0048468 GO:0048477 GO:0048513 GO:0048563 GO:0048569 GO:0048609 GO:0048707 GO:0048729 GO:0048731 GO:0048736 GO:0048737 GO:0048856 GO:0048869 GO:0048870 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051174 GO:0051179 GO:0051186 GO:0051188 GO:0051193 GO:0051196 GO:0051234 GO:0051235 GO:0051641 GO:0051649 GO:0051674 GO:0051704 GO:0055086 GO:0055088 GO:0055090 GO:0060429 GO:0060562 GO:0062012 GO:0065007 GO:0065008 GO:0070013 GO:0070328 GO:0070566 GO:0071704 GO:0072521 GO:0072522 GO:0080020 GO:0080090 GO:0090130 GO:0090132 GO:0090407 GO:0098588 GO:0098805 GO:1900371 GO:1900542 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1990143
KEGG Pathways
Metabolic & Signaling
ko00770 ko01100 ko04130 ko04721 map00770 map01100 map04130 map04721
Pfam Domains
Protein Families
CTP_transf_like CoaE

Protein Analysis

173

Amino Acids

18.81

Weight (kDa)

5.47

Isoelectric Point (pI)

40.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CTP_transf_like PF01467 22 - 125 4.7e-11 Cytidylyltransferase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 74
AccII CGCG 1 cut(s) 122
AciI CCGC 8 cut(s) 41, 72, 85, 120, 363, 404, 447, 488
AclWI GGATC 5 cut(s) 147, 287, 300, 435, 448
AcoI YGGCCR 2 cut(s) 97, 177
AcsI RAATTY 1 cut(s) 156
AflII CTTAAG 1 cut(s) 410
AgsI TTSAA 4 cut(s) 236, 269, 281, 419
AloI GAACNNNNNNTCC 2 cut(s) 48, 80
AluBI AGCT 3 cut(s) 34, 389, 409
AluI AGCT 3 cut(s) 34, 389, 409
AlwI GGATC 5 cut(s) 147, 287, 300, 435, 448
AoxI GGCC 7 cut(s) 97, 117, 177, 301, 397, 455, 495
ApeKI GCWGC 1 cut(s) 406
ApoI RAATTY 1 cut(s) 156
Asp700I GAANNNNTTC 1 cut(s) 399
AspLEI GCGC 1 cut(s) 355
AspS9I GGNCC 2 cut(s) 167, 302
AvaII GGWCC 1 cut(s) 167
BalI TGGCCA 1 cut(s) 179
BamHI GGATCC 2 cut(s) 292, 440
BanI GGYRCC 1 cut(s) 74
BbvCI CCTCAGC 1 cut(s) 390
BbvI GCAGC 1 cut(s) 418
BccI CCATC 1 cut(s) 108
BceAI ACGGC 3 cut(s) 44, 112, 376
BfaI CTAG 2 cut(s) 135, 356
BfoI RGCGCY 1 cut(s) 356
BfrI CTTAAG 1 cut(s) 410
BglII AGATCT 1 cut(s) 427
BisI GCNGC 3 cut(s) 73, 120, 407
BlsI GCNGC 3 cut(s) 74, 121, 408
Bme18I GGWCC 1 cut(s) 167
BmgT120I GGNCC 2 cut(s) 167, 302
BmiI GGNNCC 4 cut(s) 58, 76, 294, 442
BpmI CTGGAG 1 cut(s) 347
Bpu10I CCTNAGC 1 cut(s) 390
BpuEI CTTGAG 2 cut(s) 98, 230
Bsa29I ATCGAT 1 cut(s) 103
BsaBI GATNNNNATC 1 cut(s) 321
BsaJI CCNNGG 1 cut(s) 60
BsaXI ACNNNNNCTCC 2 cut(s) 48, 78
Bse8I GATNNNNATC 1 cut(s) 321
BseCI ATCGAT 1 cut(s) 103
BseDI CCNNGG 1 cut(s) 60
BseGI GGATG 1 cut(s) 228
BseJI GATNNNNATC 1 cut(s) 321
BseMII CTCAG 2 cut(s) 186, 381
BseXI GCAGC 1 cut(s) 418
Bsh1236I CGCG 1 cut(s) 122
Bsh1285I CGRYCG 1 cut(s) 85
BshFI GGCC 7 cut(s) 99, 119, 179, 303, 399, 457, 497
BshNI GGYRCC 1 cut(s) 74
BshVI ATCGAT 1 cut(s) 103
BsiEI CGRYCG 1 cut(s) 85
BsiSI CCGG 1 cut(s) 444
BsnI GGCC 7 cut(s) 99, 119, 179, 303, 399, 457, 497
Bsp143I GATC 4 cut(s) 139, 292, 427, 440
BspACI CCGC 8 cut(s) 41, 72, 85, 120, 363, 404, 447, 488
BspANI GGCC 7 cut(s) 99, 119, 179, 303, 399, 457, 497
BspCNI CTCAG 2 cut(s) 187, 382
BspDI ATCGAT 1 cut(s) 103
BspFNI CGCG 1 cut(s) 122
BspLI GGNNCC 4 cut(s) 58, 76, 294, 442
BspPI GGATC 5 cut(s) 147, 287, 300, 435, 448
BspT107I GGYRCC 1 cut(s) 74
BspTI CTTAAG 1 cut(s) 410
BssECI CCNNGG 1 cut(s) 60
BssMI GATC 4 cut(s) 139, 292, 427, 440
Bst4CI ACNGT 2 cut(s) 189, 369
Bst6I CTCTTC 1 cut(s) 377
BstAFI CTTAAG 1 cut(s) 410
BstC8I GCNNGC 1 cut(s) 513
BstDEI CTNAG 2 cut(s) 195, 390
BstDSI CCRYGG 1 cut(s) 60
BstF5I GGATG 1 cut(s) 228
BstFNI CGCG 1 cut(s) 122
BstH2I RGCGCY 1 cut(s) 356
BstHHI GCGC 1 cut(s) 355
BstKTI GATC 4 cut(s) 142, 295, 430, 443
BstMBI GATC 4 cut(s) 139, 292, 427, 440
BstMCI CGRYCG 1 cut(s) 85
BstMWI GCNNNNNNNGC 3 cut(s) 40, 271, 494
BstUI CGCG 1 cut(s) 122
BstV1I GCAGC 1 cut(s) 418
BstX2I RGATCY 3 cut(s) 292, 427, 440
BstYI RGATCY 3 cut(s) 292, 427, 440
Bsu15I ATCGAT 1 cut(s) 103
BsuRI GGCC 7 cut(s) 99, 119, 179, 303, 399, 457, 497
BsuTUI ATCGAT 1 cut(s) 103
BtgI CCRYGG 1 cut(s) 60
BtsCI GGATG 1 cut(s) 228
Cac8I GCNNGC 1 cut(s) 513
CfoI GCGC 1 cut(s) 355
Cfr13I GGNCC 2 cut(s) 167, 302
ClaI ATCGAT 1 cut(s) 103
DdeI CTNAG 2 cut(s) 195, 390
DpnI GATC 4 cut(s) 141, 294, 429, 442
DpnII GATC 4 cut(s) 139, 292, 427, 440
EaeI YGGCCR 2 cut(s) 97, 177
Eam1104I CTCTTC 1 cut(s) 377
EarI CTCTTC 1 cut(s) 377
EciI GGCGGA 4 cut(s) 30, 378, 462, 503
Eco147I AGGCCT 1 cut(s) 399
Eco47I GGWCC 1 cut(s) 167
FaiI YATR 5 cut(s) 20, 54, 173, 300, 517
Fnu4HI GCNGC 3 cut(s) 73, 120, 407
FokI GGATG 1 cut(s) 235
Fsp4HI GCNGC 3 cut(s) 73, 120, 407
FspBI CTAG 2 cut(s) 135, 356
GlaI GCGC 1 cut(s) 354
GluI GCNGC 3 cut(s) 73, 120, 407
GsuI CTGGAG 1 cut(s) 347
HaeII RGCGCY 1 cut(s) 356
HaeIII GGCC 7 cut(s) 99, 119, 179, 303, 399, 457, 497
HapII CCGG 1 cut(s) 444
HhaI GCGC 1 cut(s) 355
Hin6I GCGC 1 cut(s) 353
HinP1I GCGC 1 cut(s) 353
HinfI GANTC 1 cut(s) 322
HpaII CCGG 1 cut(s) 444
Hpy188I TCNGA 1 cut(s) 13
Hpy188III TCNNGA 2 cut(s) 326, 438
Hpy99I CGWCG 2 cut(s) 127, 167
HpyAV CCTTC 4 cut(s) 88, 389, 410, 487
HpyCH4III ACNGT 2 cut(s) 189, 369
HpyCH4V TGCA 2 cut(s) 274, 308
HpyF10VI GCNNNNNNNGC 3 cut(s) 40, 271, 494
HpyF3I CTNAG 2 cut(s) 195, 390
HspAI GCGC 1 cut(s) 353
Kzo9I GATC 4 cut(s) 139, 292, 427, 440
LmnI GCTCC 1 cut(s) 56
LpnPI CCDG 4 cut(s) 311, 318, 423, 457
Lsp1109I GCAGC 1 cut(s) 418
MaeI CTAG 2 cut(s) 135, 356
MalI GATC 4 cut(s) 141, 294, 429, 442
MboI GATC 4 cut(s) 139, 292, 427, 440
MboII GAAGA 1 cut(s) 394
MfeI CAATTG 1 cut(s) 333
MflI RGATCY 3 cut(s) 292, 427, 440
MlsI TGGCCA 1 cut(s) 179
MluCI AATT 4 cut(s) 25, 156, 238, 333
MluNI TGGCCA 1 cut(s) 179
MmeI TCCRAC 1 cut(s) 133
MnlI CCTC 7 cut(s) 208, 254, 322, 343, 385, 468, 478
Mox20I TGGCCA 1 cut(s) 179
MroXI GAANNNNTTC 1 cut(s) 399
MscI TGGCCA 1 cut(s) 179
MseI TTAA 2 cut(s) 375, 411
Msp20I TGGCCA 1 cut(s) 179
MspCI CTTAAG 1 cut(s) 410
MspI CCGG 1 cut(s) 444
MunI CAATTG 1 cut(s) 333
MvnI CGCG 1 cut(s) 122
MwoI GCNNNNNNNGC 3 cut(s) 40, 271, 494
NdeII GATC 4 cut(s) 139, 292, 427, 440
NlaIV GGNNCC 4 cut(s) 58, 76, 294, 442
NmeAIII GCCGAG 1 cut(s) 483
PceI AGGCCT 1 cut(s) 399
PdmI GAANNNNTTC 1 cut(s) 399
PfeI GAWTC 1 cut(s) 322
PkrI GCNGC 3 cut(s) 74, 121, 408
PspN4I GGNNCC 4 cut(s) 58, 76, 294, 442
PspPI GGNCC 2 cut(s) 167, 302
PsuI RGATCY 3 cut(s) 292, 427, 440
SaqAI TTAA 2 cut(s) 375, 411
SatI GCNGC 3 cut(s) 73, 120, 407
Sau3AI GATC 4 cut(s) 139, 292, 427, 440
Sau96I GGNCC 2 cut(s) 167, 302
SetI ASST 7 cut(s) 36, 80, 172, 246, 286, 391, 411
SinI GGWCC 1 cut(s) 167
SmlI CTYRAG 3 cut(s) 113, 245, 410
SmoI CTYRAG 3 cut(s) 113, 245, 410
Sse9I AATT 4 cut(s) 25, 156, 238, 333
SseBI AGGCCT 1 cut(s) 399
SsiI CCGC 8 cut(s) 41, 72, 85, 120, 363, 404, 447, 488
SspMI CTAG 2 cut(s) 135, 356
StuI AGGCCT 1 cut(s) 399
TaaI ACNGT 2 cut(s) 189, 369
TaqI TCGA 3 cut(s) 81, 103, 142
TasI AATT 4 cut(s) 25, 156, 238, 333
TauI GCSGC 2 cut(s) 75, 122
TfiI GAWTC 1 cut(s) 322
Tru1I TTAA 2 cut(s) 375, 411
Tru9I TTAA 2 cut(s) 375, 411
TseI GCWGC 1 cut(s) 406
TspDTI ATGAA 2 cut(s) 239, 453
TspGWI ACGGA 3 cut(s) 140, 180, 305
Vha464I CTTAAG 1 cut(s) 410
VpaK11BI GGWCC 1 cut(s) 167
XapI RAATTY 1 cut(s) 156
XmnI GAANNNNTTC 1 cut(s) 399
XspI CTAG 2 cut(s) 135, 356
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.