pycom15g24420

WD40 repeats

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0008489
Physical Location & Seq
Forward (+)
18598480 .. 18609428
10949 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3075 bp
ATGGAGTGGACAACGGTGCAGCATCTGGATCTACGACATGTGGGACGCAGTTCAAAGCAGTTGCAGCCTCATGCTGCTGCCTTTCATCCCCATCAGGCCCTTGTCGCCGTTGCCATTGGAAACTACATCATTGAAATGGATGCATTGACAGGAAGCAAGATTTCATCTATTGATATTGGTACCCCCGTTGTCCGCATGTCCTATAGCCCCACAAGTGGGCATTCAGTGGTGGCGATTGTTGAGGACTGTACCATTCGCTCCTGTGATTTTGATGCTGAGCAAACATGCGTCTTGCATTCACCTGAGAAGAAGACAGAACAAATTTCTTCTGATACAGAAGTCCATCTCGCTTTGACGCCTCTCCAGCCTGTAGTGTTTTTCGGTTTCCACAAGAAAATGAGTGTCACAGTTGTTGGAACTGTTGAAGGAGGAAGAGTGCCTACAAAAATAAAGACAGATTTGAAGAAACCTATTGTCAATCTCGCATGCCATCCTCGCCACCCTGTCCTGTATGTAGCTTATGCTGATGGTTTGATTCGAGCCTACAACATTCACACCTATGCTGTTCATTACACCTTACAAATTGATAACACCATAAAGCTCATTGGTGCTGGTGCATTTGGTTTTCACCCAACATTGGAGTGGATCTTTGTTGGTGATCGACGGGGTACTCTGCTCGCATGGGATGTGTCAACTGAGAGACCTAGTATGATTGGAATTACACAAGTGGGTTCCCAACCAATAGCTTCAGTTTCGTGGCTCCCCTTGTTGCGGTTACTTGTGACTGTTTCCAAGGATGGAACTCTTCAAGTGTGGAAAACACGGGTTATAATTAATCCGAATAGACCTCCAATGCAAGCAAATTTCTTTGAGCCTGCTGCAATTGAATCACTTGATATCCCTCGCATCCTCTCTCAGCAGGGTGGTGAAGCAGCTTACCCTTTACCGCAAATTAAAACTCTAGAAGTTCACCCAAAATTAAATTTAGCAGCACTTCTGTTTGCAAATATGACAGGGGGAGACAATGTGAAAAATAGGGCAGCGTACACTAGGGAAGGAAGGAAACAGCTGTTTGCAGTTTTGCAAGGTGCAAGAGGGTCTTCAGCATCTGTTTTGAAGGAAAAGCTTTCAGCTTTGGGTTCATCTGGAATATTAGCTGAACATCAACTTCAAGCTCAACTGCAAGAACATCATCTGAAAGGCCACAGTCAGCTGACAATATCAGACATTGCCCGGAAGGCTTTTCTCCACAGCCATTTTATGGAAGGTCATGCCAAAAGTGCCCCAATATCTCGGCTGCCCCTCATTACTATTGTAGACACTAAGCATCATCTGAAGGATGTTCCTGTATTTCAGCCTTTTCACCTGGAGTTAAATTTCTTCAATAAAGAGAATCGGGTTCTTCATTATCCTGGCCTATTTCTTGTTGTCTATGAGTTTAGTGGTGCTACAAATGAAGTGGTGCTTTATTTTGAAAATACCGATTCTCAGGCAGCAAACAGCAAATGTACCACTATAAAAGGTCGTGATGCAGCATTTATTGGACCCAATGAAAATCAGTTTGCAATTCTTGATGATGATAAGACTGGACTGGTTTTGTATATTCTACCTAAAAAGGCTTCTCCTGAAGCTAATGAGAAGATTCTATTGGCTGAAGAACGCCAACCTGTGGATACTGACACTGGTCCCAAGGGTCCAATGCAATTTATGTTTGAAATTGAAGTTGATCGAATTTTTTCGACTCCAATAGAGTCAACATTGATGTTTGCTTCTCATGGGAATCAGATTGGCTTGGCAAAGTTGATTCAAGGATCCCGGCTTTCTAATTCTGATGGTCATTATATAGCAACAAAGGGTGAAGGGAAAAAGTCAATTAAGTTGAAACTAAATGAGATTGTACTTCAGGTTCACTGGCAAGAAACTCTTAGGGGCTATGTAGCTGGAATATTAACGACGCAAAGGGTGCTTATAGTTTCGGCAGATCTAGATATACTCGCAGGCAGTTCCGCCAAATTTGATAGAGGACTTCCTTCAATATCCTTTACAACATTTTGGTCTCTTTTATGGGTTGGACCTGCACTTCTCTTTTCTACTACCACTGCAATTAGCGTTCTTGGCTGGGACGGTAGAGTAAGGACTATTCTCTCTATCAGTATGCCTTATGCAGTTTTGGTTGGTGCGCTGAATGATCGGTTGTTGCTTGCAACCCCAACAGAAATAAACCCCAGACAAAAGAAGGGAGTTGAGATTAAGAGCTGTCTTGTTGGGCTTCTTGAACCTCTTCTTATTGGATTTGCCACAATGCAAGAGAGATTTGAGCAGAAGCTTGACCTTCCAGAGATATTATATCAAATAACATCAAGGTTTGACAGCCTGCGTATTACTCCAAGGTCTCTTGATATTCTTGCTAGAGGCTCTCCTGTTTGTGGAGATCTTTCTGTGTCGCTATCTCAAGCAGGACCACAGTTCACTCAGGTGTTGAGGGGTGTCTATGCTATCAAAGCTCTCCGGTTTACAACTGCTTTGTCTGTATTAAAAGACGAATTTCTGCGCTCTAGAGATTATCCAAGATGTCCTCCAACCTCTCATTTGTTCCACCGGTTCCGCCAGTTGGGTTATGCATGTATCAAGTTTGGGCAGTTTGATAGTGCAAAAGAAACCTTTGAAGTTATAGCTGATTATGAAAGTATGCTCGACCTCTTGATATGCCACCTTAACCCCAGTGCCATGCGGCGTCTTGCTCAAAAACTAGAAGAAGATGGCACAGATTCAGAATTAAGACGATACTGTGAAAGGATTTTAAGAGTCCGTTCTACTGGATGGACTCAAGGAATTTTCGCTAACTTTGCTGCTGAGAGTATGGTCCCTAAAGGTCCGGAATGGGGTGGTGGGAACTGGGAGATCAAAACACCAACAAACATGAAGGCTGTTCCTCAGTGGGAACTGGCTGCAGAGGTGATGCCGTACATGAAGACTGATGATGGCACCATCCCATCCATTATCGCTGATCGATATTGGTGTTTACTTGGGATCAATCAAAGGACGAGGCAACATTGTAGAAGTAAGGGAAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
COPI_C

Protein Analysis

1025

Amino Acids

113.8

Weight (kDa)

8.7

Isoelectric Point (pI)

39.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_WDR36-Utp21_1st PF25171 14 - 272 1.5e-07 WDR36/Utp21 first beta-propeller
Beta-prop_WDR3_1st PF25173 152 - 274 1e-06 WDR3 first beta-propeller domain
Beta-prop_THOC3 PF25174 155 - 275 5e-06 THOC3 beta-propeller domain
WD40_CDC20-Fz PF24807 155 - 277 4.5e-07 CDC20/Fizzy WD40 domain
Beta-prop_EML_2 PF23414 161 - 274 4.2e-06 Echinoderm microtubule-associated protein second beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 830
Acc36I ACCTGC 1 cut(s) 2083
Acc65I GGTACC 1 cut(s) 179
AccB1I GGYRCC 2 cut(s) 179, 2984
AccB7I CCANNNNNTGG 2 cut(s) 1261, 1669
AccI GTMKAC 1 cut(s) 1317
AccIII TCCGGA 1 cut(s) 2875
AciI CCGC 6 cut(s) 193, 772, 947, 2007, 2605, 2731
AclWI GGATC 5 cut(s) 36, 653, 1806, 1819, 3038
AcsI RAATTY 8 cut(s) 321, 862, 982, 1375, 1731, 2012, 2543, 2832
AcuI CTGAAG 6 cut(s) 732, 1086, 1355, 1647, 1674, 1886
AcyI GRCGYC 2 cut(s) 356, 2734
AfaI GTAC 7 cut(s) 181, 250, 670, 1046, 1510, 1899, 2966
AfiI CCNNNNNNNGG 9 cut(s) 215, 216, 637, 771, 1261, 1669, 2426, 2611, 2882
AflIII ACRYGT 1 cut(s) 37
AgeI ACCGGT 1 cut(s) 2598
AjnI CCWGG 2 cut(s) 1365, 1411
AjuI GAANNNNNNNTTGG 2 cut(s) 1631, 1663
AleI CACNNNNGTG 1 cut(s) 2474
Alw26I GTCTC 4 cut(s) 694, 1014, 2061, 2397
AlwI GGATC 5 cut(s) 36, 653, 1806, 1819, 3038
AlwNI CAGNNNCTG 2 cut(s) 25, 1109
Aor13HI TCCGGA 1 cut(s) 2875
AoxI GGCC 3 cut(s) 96, 1201, 1414
ApoI RAATTY 8 cut(s) 321, 862, 982, 1375, 1731, 2012, 2543, 2832
AseI ATTAAT 1 cut(s) 834
AsiGI ACCGGT 1 cut(s) 2598
Asp700I GAANNNNTTC 2 cut(s) 1735, 2280
Asp718I GGTACC 1 cut(s) 179
AspLEI GCGC 2 cut(s) 2182, 2553
AspS9I GGNCC 8 cut(s) 97, 1544, 1685, 1694, 2072, 2459, 2863, 2873
AsuC2I CCSGG 2 cut(s) 1234, 1816
AsuHPI GGTGA 8 cut(s) 291, 620, 668, 938, 962, 1355, 1868, 2968
AvaII GGWCC 7 cut(s) 1544, 1685, 1694, 2072, 2459, 2863, 2873
BaeGI GKGCMC 1 cut(s) 1285
BaeI ACNNNNGTAYC 4 cut(s) 171, 204, 324, 357
BamHI GGATCC 1 cut(s) 1811
BanI GGYRCC 2 cut(s) 179, 2984
BarI GAAGNNNNNNTAC 2 cut(s) 424, 456
BbsI GAAGAC 3 cut(s) 317, 1092, 2978
BceAI ACGGC 2 cut(s) 92, 2947
BciT130I CCWGG 2 cut(s) 1367, 1413
BciVI GTATCC 1 cut(s) 1666
BcnI CCSGG 2 cut(s) 1234, 1816
BcoDI GTCTC 4 cut(s) 694, 1014, 2061, 2397
BfaI CTAG 7 cut(s) 705, 962, 1050, 1985, 2409, 2556, 2750
BfmI CTRYAG 3 cut(s) 202, 369, 2949
BfuAI ACCTGC 1 cut(s) 2083
BfuI GTATCC 1 cut(s) 1666
BglI GCCNNNNNGGC 1 cut(s) 1238
BglII AGATCT 2 cut(s) 1981, 2431
BlpI GCTNAGC 1 cut(s) 276
Bme1390I CCNGG 4 cut(s) 1234, 1367, 1413, 1816
Bme18I GGWCC 7 cut(s) 1544, 1685, 1694, 2072, 2459, 2863, 2873
BmgT120I GGNCC 8 cut(s) 97, 1544, 1685, 1694, 2072, 2459, 2863, 2873
BmrFI CCNGG 4 cut(s) 1234, 1367, 1413, 1816
BmrI ACTGGG 2 cut(s) 2715, 2905
BmsI GCATC 8 cut(s) 31, 130, 262, 915, 1115, 1336, 1519, 2949
BmuI ACTGGG 2 cut(s) 2715, 2905
BoxI GACNNNNGTC 1 cut(s) 1683
BpiI GAAGAC 3 cut(s) 317, 1092, 2978
BpmI CTGGAG 2 cut(s) 347, 1388
Bpu1102I GCTNAGC 1 cut(s) 276
BpuEI CTTGAG 2 cut(s) 2436, 2811
BpuMI CCSGG 2 cut(s) 1234, 1816
Bsa29I ATCGAT 1 cut(s) 3010
BsaHI GRCGYC 2 cut(s) 356, 2734
BsaI GGTCTC 3 cut(s) 694, 2061, 2397
BsaJI CCNNGG 3 cut(s) 792, 1689, 2387
BsaWI WCCGGW 3 cut(s) 2508, 2598, 2875
BsaXI ACNNNNNCTCC 4 cut(s) 420, 450, 1011, 1041
Bsc4I CCNNNNNNNGG 9 cut(s) 215, 216, 637, 771, 1261, 1669, 2426, 2611, 2882
Bse118I RCCGGY 1 cut(s) 2598
Bse1I ACTGG 9 cut(s) 1591, 1596, 1687, 1916, 2608, 2721, 2821, 2900, 2949
Bse3DI GCAATG 1 cut(s) 1227
BseAI TCCGGA 1 cut(s) 2875
BseBI CCWGG 2 cut(s) 1367, 1413
BseCI ATCGAT 1 cut(s) 3010
BseDI CCNNGG 3 cut(s) 792, 1689, 2387
BseLI CCNNNNNNNGG 9 cut(s) 215, 216, 637, 771, 1261, 1669, 2426, 2611, 2882
BseMI GCAATG 1 cut(s) 1227
BseMII CTCAG 8 cut(s) 267, 294, 687, 929, 1502, 2486, 2844, 2948
BseNI ACTGG 9 cut(s) 1591, 1596, 1687, 1916, 2608, 2721, 2821, 2900, 2949
BseSI GKGCMC 1 cut(s) 1285
BseYI CCCAGC 1 cut(s) 2118
BsgI GTGCAG 2 cut(s) 38, 2061
BshFI GGCC 3 cut(s) 98, 1203, 1416
BshNI GGYRCC 2 cut(s) 179, 2984
BshTI ACCGGT 1 cut(s) 2598
BshVI ATCGAT 1 cut(s) 3010
BsiSI CCGG 5 cut(s) 1234, 1816, 2509, 2599, 2876
BslFI GGGAC 4 cut(s) 57, 1671, 2135, 2849
BslI CCNNNNNNNGG 9 cut(s) 215, 216, 637, 771, 1261, 1669, 2426, 2611, 2882
BsmAI GTCTC 4 cut(s) 694, 1014, 2061, 2397
BsmFI GGGAC 4 cut(s) 57, 1671, 2135, 2849
BsmI GAATGC 2 cut(s) 220, 295
BsnI GGCC 3 cut(s) 98, 1203, 1416
Bso31I GGTCTC 3 cut(s) 694, 2061, 2397
Bsp1286I GDGCHC 1 cut(s) 1285
Bsp13I TCCGGA 1 cut(s) 2875
Bsp1720I GCTNAGC 1 cut(s) 276
BspACI CCGC 6 cut(s) 193, 772, 947, 2007, 2605, 2731
BspANI GGCC 3 cut(s) 98, 1203, 1416
BspCNI CTCAG 8 cut(s) 268, 295, 688, 928, 1501, 2485, 2845, 2947
BspDI ATCGAT 1 cut(s) 3010
BspEI TCCGGA 1 cut(s) 2875
BspMAI CTGCAG 1 cut(s) 2953
BspMI ACCTGC 1 cut(s) 2083
BspPI GGATC 5 cut(s) 36, 653, 1806, 1819, 3038
BspT107I GGYRCC 2 cut(s) 179, 2984
BspTNI GGTCTC 3 cut(s) 694, 2061, 2397
BsrDI GCAATG 1 cut(s) 1227
BsrFI RCCGGY 1 cut(s) 2598
BsrI ACTGG 9 cut(s) 1591, 1596, 1687, 1916, 2608, 2721, 2821, 2900, 2949
BssAI RCCGGY 1 cut(s) 2598
BssECI CCNNGG 3 cut(s) 792, 1689, 2387
BssNI GRCGYC 2 cut(s) 356, 2734
BssT1I CCWWGG 3 cut(s) 792, 1689, 2387
Bst2UI CCWGG 2 cut(s) 1367, 1413
Bst4CI ACNGT 9 cut(s) 16, 248, 409, 421, 787, 1208, 2126, 2466, 2789
Bst6I CTCTTC 3 cut(s) 427, 810, 2286
BstACI GRCGYC 2 cut(s) 356, 2734
BstAPI GCANNNNNTGC 1 cut(s) 1963
BstC8I GCNNGC 7 cut(s) 487, 678, 858, 876, 1999, 2202, 2375
BstHHI GCGC 2 cut(s) 2182, 2553
BstMAI GTCTC 4 cut(s) 694, 1014, 2061, 2397
BstNI CCWGG 2 cut(s) 1367, 1413
BstNSI RCATGY 5 cut(s) 41, 199, 288, 489, 2625
BstPAI GACNNNNGTC 1 cut(s) 1683
BstSCI CCNGG 4 cut(s) 1232, 1365, 1411, 1814
BstSFI CTRYAG 3 cut(s) 202, 369, 2949
BstSLI GKGCMC 1 cut(s) 1285
BstV2I GAAGAC 3 cut(s) 317, 1092, 2978
BstX2I RGATCY 5 cut(s) 28, 645, 1811, 1981, 2431
BstYI RGATCY 5 cut(s) 28, 645, 1811, 1981, 2431
Bsu15I ATCGAT 1 cut(s) 3010
BsuI GTATCC 1 cut(s) 1666
BsuRI GGCC 3 cut(s) 98, 1203, 1416
BsuTUI ATCGAT 1 cut(s) 3010
BtsI GCAGTG 1 cut(s) 2097
BtsIMutI CAGTG 6 cut(s) 231, 1680, 1909, 2097, 2728, 2942
BveI ACCTGC 1 cut(s) 2083
Cac8I GCNNGC 7 cut(s) 487, 678, 858, 876, 1999, 2202, 2375
CaiI CAGNNNCTG 2 cut(s) 25, 1109
CfoI GCGC 2 cut(s) 2182, 2553
Cfr10I RCCGGY 1 cut(s) 2598
Cfr13I GGNCC 8 cut(s) 97, 1544, 1685, 1694, 2072, 2459, 2863, 2873
ClaI ATCGAT 1 cut(s) 3010
CseI GACGC 5 cut(s) 54, 277, 364, 1963, 2723
Csp6I GTAC 7 cut(s) 180, 249, 669, 1045, 1509, 1898, 2965
CspAI ACCGGT 1 cut(s) 2598
CspCI CAANNNNNGTGG 2 cut(s) 1440, 1475
CviQI GTAC 7 cut(s) 180, 249, 669, 1045, 1509, 1898, 2965
Eam1104I CTCTTC 3 cut(s) 427, 810, 2286
EarI CTCTTC 3 cut(s) 427, 810, 2286
EciI GGCGGA 2 cut(s) 1996, 2594
Eco130I CCWWGG 3 cut(s) 792, 1689, 2387
Eco31I GGTCTC 3 cut(s) 694, 2061, 2397
Eco32I GATATC 1 cut(s) 898
Eco47I GGWCC 7 cut(s) 1544, 1685, 1694, 2072, 2459, 2863, 2873
Eco57I CTGAAG 6 cut(s) 732, 1086, 1355, 1647, 1674, 1886
EcoO109I RGGNCCY 1 cut(s) 97
EcoRII CCWGG 2 cut(s) 1365, 1411
EcoRV GATATC 1 cut(s) 898
EcoT14I CCWWGG 3 cut(s) 792, 1689, 2387
EcoT22I ATGCAT 2 cut(s) 145, 2623
ErhI CCWWGG 3 cut(s) 792, 1689, 2387
FalI AAGNNNNNCTT 6 cut(s) 1084, 1116, 1449, 1481, 1908, 1940
FaqI GGGAC 4 cut(s) 57, 1671, 2135, 2849
FblI GTMKAC 1 cut(s) 1317
FspBI CTAG 7 cut(s) 705, 962, 1050, 1985, 2409, 2556, 2750
GlaI GCGC 2 cut(s) 2181, 2552
GsaI CCCAGC 1 cut(s) 2122
GsuI CTGGAG 2 cut(s) 347, 1388
HaeIII GGCC 3 cut(s) 98, 1203, 1416
HapII CCGG 5 cut(s) 1234, 1816, 2509, 2599, 2876
HgaI GACGC 5 cut(s) 54, 277, 364, 1963, 2723
HhaI GCGC 2 cut(s) 2182, 2553
Hin1I GRCGYC 2 cut(s) 356, 2734
Hin6I GCGC 2 cut(s) 2180, 2551
HinP1I GCGC 2 cut(s) 2180, 2551
HincII GTYRAC 2 cut(s) 693, 1755
HindII GTYRAC 2 cut(s) 693, 1755
HindIII AAGCTT 2 cut(s) 1124, 2324
HpaII CCGG 5 cut(s) 1234, 1816, 2509, 2599, 2876
HphI GGTGA 8 cut(s) 291, 620, 668, 938, 962, 1355, 1868, 2968
Hpy188I TCNGA 8 cut(s) 331, 840, 1197, 1225, 1335, 1785, 1831, 2773
Hpy99I CGWCG 2 cut(s) 666, 1957
HpyCH4III ACNGT 9 cut(s) 16, 248, 409, 421, 787, 1208, 2126, 2466, 2789
Hsp92I GRCGYC 2 cut(s) 356, 2734
HspAI GCGC 2 cut(s) 2180, 2551
Kpn2I TCCGGA 1 cut(s) 2875
KpnI GGTACC 1 cut(s) 183
LmnI GCTCC 2 cut(s) 263, 765
LweI GCATC 8 cut(s) 31, 130, 262, 915, 1115, 1336, 1519, 2949
MaeI CTAG 7 cut(s) 705, 962, 1050, 1985, 2409, 2556, 2750
MaeIII GTNAC 3 cut(s) 403, 774, 781
MfeI CAATTG 1 cut(s) 882
MflI RGATCY 5 cut(s) 28, 645, 1811, 1981, 2431
MhlI GDGCHC 1 cut(s) 1285
MlyI GAGTC 4 cut(s) 1735, 1760, 2814, 2818
MmeI TCCRAC 3 cut(s) 394, 2050, 2603
Mph1103I ATGCAT 2 cut(s) 145, 2623
MroI TCCGGA 1 cut(s) 2875
MroXI GAANNNNTTC 2 cut(s) 1735, 2280
MslI CAYNNNNRTG 4 cut(s) 134, 558, 640, 2474
MspA1I CMGCKG 2 cut(s) 1069, 1213
MspI CCGG 5 cut(s) 1234, 1816, 2509, 2599, 2876
MspR9I CCNGG 4 cut(s) 1234, 1367, 1413, 1816
MunI CAATTG 1 cut(s) 882
Mva1269I GAATGC 2 cut(s) 220, 295
MvaI CCWGG 2 cut(s) 1367, 1413
NciI CCSGG 2 cut(s) 1234, 1816
NmeAIII GCCGAG 1 cut(s) 1273
NmuCI GTSAC 2 cut(s) 403, 781
NsiI ATGCAT 2 cut(s) 145, 2623
NspI RCATGY 5 cut(s) 41, 199, 288, 489, 2625
OliI CACNNNNGTG 1 cut(s) 2474
PaeI GCATGC 1 cut(s) 489
PciI ACATGT 1 cut(s) 37
PctI GAATGC 2 cut(s) 220, 295
PdmI GAANNNNTTC 2 cut(s) 1735, 2280
PfeI GAWTC 8 cut(s) 535, 887, 1393, 1484, 1642, 1780, 1804, 2768
PflMI CCANNNNNTGG 2 cut(s) 1261, 1669
PinAI ACCGGT 1 cut(s) 2598
PleI GAGTC 4 cut(s) 1735, 1759, 2813, 2818
PpsI GAGTC 4 cut(s) 1735, 1759, 2813, 2818
PscI ACATGT 1 cut(s) 37
PshAI GACNNNNGTC 1 cut(s) 1683
PshBI ATTAAT 1 cut(s) 834
PsiI TTATAA 1 cut(s) 830
Psp6I CCWGG 2 cut(s) 1365, 1411
PspFI CCCAGC 1 cut(s) 2118
PspGI CCWGG 2 cut(s) 1365, 1411
PspPI GGNCC 8 cut(s) 97, 1544, 1685, 1694, 2072, 2459, 2863, 2873
PsrI GAACNNNNNNTAC 2 cut(s) 1890, 1922
PstI CTGCAG 1 cut(s) 2953
PstNI CAGNNNCTG 2 cut(s) 25, 1109
PsuI RGATCY 5 cut(s) 28, 645, 1811, 1981, 2431
PvuII CAGCTG 2 cut(s) 1069, 1213
RsaI GTAC 7 cut(s) 181, 250, 670, 1046, 1510, 1899, 2966
RsaNI GTAC 7 cut(s) 180, 249, 669, 1045, 1509, 1898, 2965
RseI CAYNNNNRTG 4 cut(s) 134, 558, 640, 2474
Sau96I GGNCC 8 cut(s) 97, 1544, 1685, 1694, 2072, 2459, 2863, 2873
SchI GAGTC 4 cut(s) 1735, 1760, 2814, 2818
ScrFI CCNGG 4 cut(s) 1234, 1367, 1413, 1816
SduI GDGCHC 1 cut(s) 1285
SfaNI GCATC 8 cut(s) 31, 130, 262, 915, 1115, 1336, 1519, 2949
SfcI CTRYAG 3 cut(s) 202, 369, 2949
SinI GGWCC 7 cut(s) 1544, 1685, 1694, 2072, 2459, 2863, 2873
SmiMI CAYNNNNRTG 4 cut(s) 134, 558, 640, 2474
SmlI CTYRAG 2 cut(s) 2451, 2826
SmoI CTYRAG 2 cut(s) 2451, 2826
SphI GCATGC 1 cut(s) 489
SsiI CCGC 6 cut(s) 193, 772, 947, 2007, 2605, 2731
SspI AATATT 2 cut(s) 1152, 1947
SspMI CTAG 7 cut(s) 705, 962, 1050, 1985, 2409, 2556, 2750
StyD4I CCNGG 4 cut(s) 1232, 1365, 1411, 1814
StyI CCWWGG 3 cut(s) 792, 1689, 2387
TaaI ACNGT 9 cut(s) 16, 248, 409, 421, 787, 1208, 2126, 2466, 2789
TaqI TCGA 6 cut(s) 538, 661, 1729, 1739, 2694, 3010
TatI WGTACW 1 cut(s) 1897
TauI GCSGC 1 cut(s) 2734
TfiI GAWTC 8 cut(s) 535, 887, 1393, 1484, 1642, 1780, 1804, 2768
TscAI CASTG 6 cut(s) 231, 1687, 1916, 2104, 2728, 2942
TseFI GTSAC 2 cut(s) 403, 781
Tsp45I GTSAC 2 cut(s) 403, 781
TspGWI ACGGA 1 cut(s) 2798
TspRI CASTG 6 cut(s) 231, 1687, 1916, 2104, 2728, 2942
Van91I CCANNNNNTGG 2 cut(s) 1261, 1669
VpaK11BI GGWCC 7 cut(s) 1544, 1685, 1694, 2072, 2459, 2863, 2873
VspI ATTAAT 1 cut(s) 834
XapI RAATTY 8 cut(s) 321, 862, 982, 1375, 1731, 2012, 2543, 2832
XbaI TCTAGA 3 cut(s) 961, 1984, 2555
XceI RCATGY 5 cut(s) 41, 199, 288, 489, 2625
XcmI CCANNNNNNNNNTGG 1 cut(s) 639
XmiI GTMKAC 1 cut(s) 1317
XmnI GAANNNNTTC 2 cut(s) 1735, 2280
XspI CTAG 7 cut(s) 705, 962, 1050, 1985, 2409, 2556, 2750
Zsp2I ATGCAT 2 cut(s) 145, 2623
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.