WD40 repeats
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G50590 AT3G50590 |
| fragaria_vesca | FvH4_1g15690 FvH4_1g15690 FvH4_1g15690 |
| malus_domestica | MD02G1168900.v1.1 MD15G1280900.v1.1 |
| prunus_persica | Prupe.7G136400_v2.0.a1 |
| pyrus_communis | pycom15g24420 pycom15g24430 |
| rosa_chinensis | RchiOBHm_Chr2g0105001 |
| rosa_laevigata | RLG00000017388 |
| rosa_multiflora | Rmu_co8378509.1_g000001 Rmu_sc0000641.1_g000029 |
| rosa_roxburghii | Rroxscaffold_2G00138590 |
| rosa_rugosa | Rorug02G0124900 Rorug02G0124900 |
| rosa_samantha | Rh2AG175300 Rh2BG183200 Rh2BG183300 Rh2CG180000 Rh2DG181700 |
| rosa_wichuraiana | Rw2G013780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 866 |
| AarI | CACCTGC | 1 cut(s) | 3107 |
| Acc36I | ACCTGC | 4 cut(s) | 919, 2418, 3107, 3610 |
| AccB1I | GGYRCC | 3 cut(s) | 50, 258, 472 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 254, 2651 |
| AccBSI | CCGCTC | 1 cut(s) | 4028 |
| AccI | GTMKAC | 1 cut(s) | 190 |
| AccII | CGCG | 4 cut(s) | 44, 46, 985, 4137 |
| AclWI | GGATC | 9 cut(s) | 239, 360, 1062, 1075, 2822, 3480, 3493, 3753, 4478 |
| AcoI | YGGCCR | 3 cut(s) | 2484, 4210, 4515 |
| AcsI | RAATTY | 8 cut(s) | 898, 1396, 1601, 2087, 2621, 3281, 3940, 4574 |
| AcuI | CTGAAG | 8 cut(s) | 768, 1376, 1387, 1961, 3138, 3294, 4184, 4202 |
| AcvI | CACGTG | 1 cut(s) | 860 |
| AcyI | GRCGYC | 1 cut(s) | 2752 |
| AfaI | GTAC | 5 cut(s) | 286, 706, 1556, 1974, 3630 |
| AflII | CTTAAG | 1 cut(s) | 2818 |
| AflIII | ACRYGT | 4 cut(s) | 37, 857, 859, 4446 |
| AgeI | ACCGGT | 1 cut(s) | 2268 |
| AjiI | CACGTC | 1 cut(s) | 40 |
| Alw21I | GWGCWC | 1 cut(s) | 4174 |
| Alw26I | GTCTC | 8 cut(s) | 730, 793, 984, 1504, 2475, 2524, 2669, 3366 |
| AlwI | GGATC | 9 cut(s) | 239, 360, 1062, 1075, 2822, 3480, 3493, 3753, 4478 |
| Ama87I | CYCGRG | 1 cut(s) | 1856 |
| AoxI | GGCC | 9 cut(s) | 1008, 1260, 2150, 2484, 4210, 4231, 4515, 4649, 4655 |
| ApoI | RAATTY | 8 cut(s) | 898, 1396, 1601, 2087, 2621, 3281, 3940, 4574 |
| AseI | ATTAAT | 1 cut(s) | 870 |
| AsiGI | ACCGGT | 1 cut(s) | 2268 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 2358, 3431, 4107 |
| AspLEI | GCGC | 5 cut(s) | 46, 1581, 2260, 2631, 2829 |
| AsuC2I | CCSGG | 1 cut(s) | 4653 |
| AsuII | TTCGAA | 1 cut(s) | 4327 |
| AvaI | CYCGRG | 1 cut(s) | 1856 |
| AvaII | GGWCC | 6 cut(s) | 1709, 2537, 2891, 3493, 3653, 3807 |
| BaeGI | GKGCMC | 6 cut(s) | 53, 263, 475, 1227, 1306, 3928 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 360, 393, 4035, 4068 |
| BalI | TGGCCA | 1 cut(s) | 2486 |
| BamHI | GGATCC | 2 cut(s) | 1067, 3485 |
| BanI | GGYRCC | 3 cut(s) | 50, 258, 472 |
| BanII | GRGCYC | 1 cut(s) | 2349 |
| BauI | CACGAG | 3 cut(s) | 203, 1018, 3549 |
| BbrPI | CACGTG | 1 cut(s) | 860 |
| BbsI | GAAGAC | 4 cut(s) | 860, 1476, 3134, 4500 |
| Bbv12I | GWGCWC | 1 cut(s) | 4174 |
| BceAI | ACGGC | 4 cut(s) | 92, 3267, 4512, 4654 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 109, 143 |
| BciVI | GTATCC | 3 cut(s) | 1880, 4063, 4538 |
| BclI | TGATCA | 1 cut(s) | 3025 |
| BcnI | CCSGG | 1 cut(s) | 4653 |
| BcoDI | GTCTC | 8 cut(s) | 730, 793, 984, 1504, 2475, 2524, 2669, 3366 |
| BfaI | CTAG | 8 cut(s) | 741, 1091, 1095, 2060, 2634, 4118, 4236, 4271 |
| BfmI | CTRYAG | 4 cut(s) | 405, 1564, 2178, 3963 |
| BfrI | CTTAAG | 1 cut(s) | 2818 |
| BfuAI | ACCTGC | 4 cut(s) | 919, 2418, 3107, 3610 |
| BfuI | GTATCC | 3 cut(s) | 1880, 4063, 4538 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3761 |
| BglII | AGATCT | 2 cut(s) | 2056, 2509 |
| Bme18I | GGWCC | 6 cut(s) | 1709, 2537, 2891, 3493, 3653, 3807 |
| BmeT110I | CYCGRG | 1 cut(s) | 1856 |
| BmgBI | CACGTC | 1 cut(s) | 40 |
| BmrI | ACTGGG | 4 cut(s) | 2733, 2923, 3812, 4498 |
| BmuI | ACTGGG | 4 cut(s) | 2733, 2923, 3812, 4498 |
| BpiI | GAAGAC | 4 cut(s) | 860, 1476, 3134, 4500 |
| BpmI | CTGGAG | 7 cut(s) | 47, 669, 1409, 1509, 1773, 3507, 4068 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1123, 3497, 4430 |
| Bpu14I | TTCGAA | 1 cut(s) | 4327 |
| BpuEI | CTTGAG | 3 cut(s) | 2514, 2829, 4082 |
| BpuMI | CCSGG | 1 cut(s) | 4653 |
| BsaAI | YACGTR | 1 cut(s) | 860 |
| BsaBI | GATNNNNATC | 1 cut(s) | 243 |
| BsaHI | GRCGYC | 1 cut(s) | 2752 |
| BsaI | GGTCTC | 3 cut(s) | 730, 2475, 2669 |
| BsaWI | WCCGGW | 1 cut(s) | 2268 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 981, 1011, 2791, 2821 |
| Bse118I | RCCGGY | 2 cut(s) | 2268, 4212 |
| Bse3DI | GCAATG | 1 cut(s) | 1248 |
| Bse8I | GATNNNNATC | 1 cut(s) | 243 |
| BseJI | GATNNNNATC | 1 cut(s) | 243 |
| BseMI | GCAATG | 1 cut(s) | 1248 |
| BseMII | CTCAG | 9 cut(s) | 330, 723, 1086, 1667, 2242, 2786, 2862, 3887, 3920 |
| BseRI | GAGGAG | 2 cut(s) | 2812, 3344 |
| BseSI | GKGCMC | 6 cut(s) | 53, 263, 475, 1227, 1306, 3928 |
| BseYI | CCCAGC | 1 cut(s) | 3461 |
| BsgI | GTGCAG | 3 cut(s) | 38, 2139, 3324 |
| Bsh1236I | CGCG | 4 cut(s) | 44, 46, 985, 4137 |
| BshFI | GGCC | 9 cut(s) | 1010, 1262, 2152, 2486, 4212, 4233, 4517, 4651, 4657 |
| BshNI | GGYRCC | 3 cut(s) | 50, 258, 472 |
| BshTI | ACCGGT | 1 cut(s) | 2268 |
| BsiHKAI | GWGCWC | 1 cut(s) | 4174 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1856 |
| BsiSI | CCGG | 3 cut(s) | 2269, 4213, 4652 |
| BslFI | GGGAC | 2 cut(s) | 466, 1695 |
| BsmAI | GTCTC | 8 cut(s) | 730, 793, 984, 1504, 2475, 2524, 2669, 3366 |
| BsmFI | GGGAC | 2 cut(s) | 466, 1695 |
| BsmI | GAATGC | 4 cut(s) | 230, 331, 942, 3933 |
| BsnI | GGCC | 9 cut(s) | 1010, 1262, 2152, 2486, 4212, 4233, 4517, 4651, 4657 |
| Bso31I | GGTCTC | 3 cut(s) | 730, 2475, 2669 |
| BsoBI | CYCGRG | 1 cut(s) | 1856 |
| Bsp119I | TTCGAA | 1 cut(s) | 4327 |
| Bsp1286I | GDGCHC | 8 cut(s) | 53, 263, 475, 1227, 1306, 2349, 3928, 4174 |
| Bsp19I | CCATGG | 1 cut(s) | 4228 |
| BspANI | GGCC | 9 cut(s) | 1010, 1262, 2152, 2486, 4212, 4233, 4517, 4651, 4657 |
| BspCNI | CTCAG | 9 cut(s) | 331, 724, 1085, 1666, 2241, 2787, 2863, 3886, 3919 |
| BspFNI | CGCG | 4 cut(s) | 44, 46, 985, 4137 |
| BspMAI | CTGCAG | 1 cut(s) | 2182 |
| BspMI | ACCTGC | 4 cut(s) | 919, 2418, 3107, 3610 |
| BspPI | GGATC | 9 cut(s) | 239, 360, 1062, 1075, 2822, 3480, 3493, 3753, 4478 |
| BspT104I | TTCGAA | 1 cut(s) | 4327 |
| BspT107I | GGYRCC | 3 cut(s) | 50, 258, 472 |
| BspTI | CTTAAG | 1 cut(s) | 2818 |
| BspTNI | GGTCTC | 3 cut(s) | 730, 2475, 2669 |
| BsrBI | CCGCTC | 1 cut(s) | 4028 |
| BsrDI | GCAATG | 1 cut(s) | 1248 |
| BsrFI | RCCGGY | 2 cut(s) | 2268, 4212 |
| BssAI | RCCGGY | 2 cut(s) | 2268, 4212 |
| BssNAI | GTATAC | 1 cut(s) | 191 |
| BssNI | GRCGYC | 1 cut(s) | 2752 |
| BssSI | CACGAG | 3 cut(s) | 203, 1018, 3549 |
| BssT1I | CCWWGG | 5 cut(s) | 2465, 2645, 3180, 3928, 4228 |
| Bst1107I | GTATAC | 1 cut(s) | 191 |
| Bst2BI | CACGAG | 3 cut(s) | 203, 1018, 3549 |
| Bst6I | CTCTTC | 4 cut(s) | 846, 2364, 3157, 4200 |
| BstACI | GRCGYC | 1 cut(s) | 2752 |
| BstAFI | CTTAAG | 1 cut(s) | 2818 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 4247, 4608 |
| BstBAI | YACGTR | 1 cut(s) | 860 |
| BstBI | TTCGAA | 1 cut(s) | 4327 |
| BstC8I | GCNNGC | 9 cut(s) | 523, 894, 2154, 2280, 2453, 3457, 3621, 4214, 4276 |
| BstDSI | CCRYGG | 3 cut(s) | 3249, 4015, 4228 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 3630, 4121 |
| BstFNI | CGCG | 4 cut(s) | 44, 46, 985, 4137 |
| BstHHI | GCGC | 5 cut(s) | 46, 1581, 2260, 2631, 2829 |
| BstMAI | GTCTC | 8 cut(s) | 730, 793, 984, 1504, 2475, 2524, 2669, 3366 |
| BstNSI | RCATGY | 2 cut(s) | 525, 4450 |
| BstSFI | CTRYAG | 4 cut(s) | 405, 1564, 2178, 3963 |
| BstSLI | GKGCMC | 6 cut(s) | 53, 263, 475, 1227, 1306, 3928 |
| BstUI | CGCG | 4 cut(s) | 44, 46, 985, 4137 |
| BstV2I | GAAGAC | 4 cut(s) | 860, 1476, 3134, 4500 |
| BstX2I | RGATCY | 5 cut(s) | 1067, 2056, 2509, 2814, 3485 |
| BstYI | RGATCY | 5 cut(s) | 1067, 2056, 2509, 2814, 3485 |
| BstZ17I | GTATAC | 1 cut(s) | 191 |
| BsuI | GTATCC | 3 cut(s) | 1880, 4063, 4538 |
| BsuRI | GGCC | 9 cut(s) | 1010, 1262, 2152, 2486, 4212, 4233, 4517, 4651, 4657 |
| BtgI | CCRYGG | 3 cut(s) | 3249, 4015, 4228 |
| BtrI | CACGTC | 1 cut(s) | 40 |
| BtsI | GCAGTG | 3 cut(s) | 2175, 3328, 3710 |
| BveI | ACCTGC | 4 cut(s) | 919, 2418, 3107, 3610 |
| Cac8I | GCNNGC | 9 cut(s) | 523, 894, 2154, 2280, 2453, 3457, 3621, 4214, 4276 |
| CfoI | GCGC | 5 cut(s) | 46, 1581, 2260, 2631, 2829 |
| Cfr10I | RCCGGY | 2 cut(s) | 2268, 4212 |
| CseI | GACGC | 4 cut(s) | 1116, 2741, 3986, 4091 |
| CsiI | ACCWGGT | 1 cut(s) | 3631 |
| Csp6I | GTAC | 5 cut(s) | 285, 705, 1555, 1973, 3629 |
| CspAI | ACCGGT | 1 cut(s) | 2268 |
| CviQI | GTAC | 5 cut(s) | 285, 705, 1555, 1973, 3629 |
| DraI | TTTAAA | 1 cut(s) | 2613 |
| EaeI | YGGCCR | 3 cut(s) | 2484, 4210, 4515 |
| Eam1104I | CTCTTC | 4 cut(s) | 846, 2364, 3157, 4200 |
| EarI | CTCTTC | 4 cut(s) | 846, 2364, 3157, 4200 |
| EciI | GGCGGA | 2 cut(s) | 975, 3550 |
| Eco130I | CCWWGG | 5 cut(s) | 2465, 2645, 3180, 3928, 4228 |
| Eco147I | AGGCCT | 1 cut(s) | 1262 |
| Eco24I | GRGCYC | 1 cut(s) | 2349 |
| Eco31I | GGTCTC | 3 cut(s) | 730, 2475, 2669 |
| Eco32I | GATATC | 1 cut(s) | 4147 |
| Eco47I | GGWCC | 6 cut(s) | 1709, 2537, 2891, 3493, 3653, 3807 |
| Eco57I | CTGAAG | 8 cut(s) | 768, 1376, 1387, 1961, 3138, 3294, 4184, 4202 |
| Eco72I | CACGTG | 1 cut(s) | 860 |
| Eco88I | CYCGRG | 1 cut(s) | 1856 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 3630, 4121 |
| EcoO109I | RGGNCCY | 4 cut(s) | 2891, 3493, 3807, 4655 |
| EcoRI | GAATTC | 1 cut(s) | 3940 |
| EcoRV | GATATC | 1 cut(s) | 4147 |
| EcoT14I | CCWWGG | 5 cut(s) | 2465, 2645, 3180, 3928, 4228 |
| EcoT38I | GRGCYC | 1 cut(s) | 2349 |
| ErhI | CCWWGG | 5 cut(s) | 2465, 2645, 3180, 3928, 4228 |
| FaqI | GGGAC | 2 cut(s) | 466, 1695 |
| FauI | CCCGC | 2 cut(s) | 39, 3121 |
| FauNDI | CATATG | 1 cut(s) | 1215 |
| FbaI | TGATCA | 1 cut(s) | 3025 |
| FblI | GTMKAC | 1 cut(s) | 190 |
| FriOI | GRGCYC | 1 cut(s) | 2349 |
| FspBI | CTAG | 8 cut(s) | 741, 1091, 1095, 2060, 2634, 4118, 4236, 4271 |
| GlaI | GCGC | 5 cut(s) | 45, 1580, 2259, 2630, 2828 |
| GsaI | CCCAGC | 1 cut(s) | 3465 |
| GsuI | CTGGAG | 7 cut(s) | 47, 669, 1409, 1509, 1773, 3507, 4068 |
| HaeIII | GGCC | 9 cut(s) | 1010, 1262, 2152, 2486, 4212, 4233, 4517, 4651, 4657 |
| HapII | CCGG | 3 cut(s) | 2269, 4213, 4652 |
| HgaI | GACGC | 4 cut(s) | 1116, 2741, 3986, 4091 |
| HhaI | GCGC | 5 cut(s) | 46, 1581, 2260, 2631, 2829 |
| Hin1I | GRCGYC | 1 cut(s) | 2752 |
| Hin6I | GCGC | 5 cut(s) | 44, 1579, 2258, 2629, 2827 |
| HinP1I | GCGC | 5 cut(s) | 44, 1579, 2258, 2629, 2827 |
| HincII | GTYRAC | 2 cut(s) | 4444, 4536 |
| HindII | GTYRAC | 2 cut(s) | 4444, 4536 |
| HindIII | AAGCTT | 5 cut(s) | 635, 1145, 2402, 3102, 4104 |
| HpaII | CCGG | 3 cut(s) | 2269, 4213, 4652 |
| Hpy166II | GTNNAC | 8 cut(s) | 9, 191, 707, 1984, 2547, 3040, 4444, 4536 |
| Hpy8I | GTNNAC | 8 cut(s) | 9, 191, 707, 1984, 2547, 3040, 4444, 4536 |
| Hpy99I | CGWCG | 5 cut(s) | 16, 44, 107, 113, 134 |
| HpyCH4IV | ACGT | 2 cut(s) | 39, 859 |
| HpySE526I | ACGT | 2 cut(s) | 39, 859 |
| Hsp92I | GRCGYC | 1 cut(s) | 2752 |
| HspAI | GCGC | 5 cut(s) | 44, 1579, 2258, 2629, 2827 |
| KroI | GCCGGC | 1 cut(s) | 4212 |
| KroNI | GCCGGC | 1 cut(s) | 4214 |
| Ksp22I | TGATCA | 1 cut(s) | 3025 |
| MabI | ACCWGGT | 1 cut(s) | 3631 |
| MaeI | CTAG | 8 cut(s) | 741, 1091, 1095, 2060, 2634, 4118, 4236, 4271 |
| MaeII | ACGT | 2 cut(s) | 39, 859 |
| MaeIII | GTNAC | 9 cut(s) | 439, 810, 817, 823, 3157, 3354, 3592, 4189, 4556 |
| MbiI | CCGCTC | 1 cut(s) | 4028 |
| MfeI | CAATTG | 2 cut(s) | 918, 3381 |
| MflI | RGATCY | 5 cut(s) | 1067, 2056, 2509, 2814, 3485 |
| MhlI | GDGCHC | 8 cut(s) | 53, 263, 475, 1227, 1306, 2349, 3928, 4174 |
| MlsI | TGGCCA | 1 cut(s) | 2486 |
| MluNI | TGGCCA | 1 cut(s) | 2486 |
| MlyI | GAGTC | 4 cut(s) | 2836, 3143, 3865, 4233 |
| MmeI | TCCRAC | 3 cut(s) | 330, 424, 4494 |
| Mox20I | TGGCCA | 1 cut(s) | 2486 |
| MroNI | GCCGGC | 1 cut(s) | 4212 |
| MroXI | GAANNNNTTC | 3 cut(s) | 2358, 3431, 4107 |
| MscI | TGGCCA | 1 cut(s) | 2486 |
| MslI | CAYNNNNRTG | 5 cut(s) | 203, 594, 676, 2129, 3033 |
| Msp20I | TGGCCA | 1 cut(s) | 2486 |
| MspA1I | CMGCKG | 2 cut(s) | 3308, 3650 |
| MspCI | CTTAAG | 1 cut(s) | 2818 |
| MspI | CCGG | 3 cut(s) | 2269, 4213, 4652 |
| MunI | CAATTG | 2 cut(s) | 918, 3381 |
| Mva1269I | GAATGC | 4 cut(s) | 230, 331, 942, 3933 |
| MvnI | CGCG | 4 cut(s) | 44, 46, 985, 4137 |
| NaeI | GCCGGC | 1 cut(s) | 4214 |
| NciI | CCSGG | 1 cut(s) | 4653 |
| NcoI | CCATGG | 1 cut(s) | 4228 |
| NdeI | CATATG | 1 cut(s) | 1215 |
| NgoMIV | GCCGGC | 1 cut(s) | 4212 |
| NmeAIII | GCCGAG | 2 cut(s) | 1294, 2995 |
| NmuCI | GTSAC | 3 cut(s) | 3157, 4189, 4556 |
| NspI | RCATGY | 2 cut(s) | 525, 4450 |
| NspV | TTCGAA | 1 cut(s) | 4327 |
| PaeI | GCATGC | 1 cut(s) | 525 |
| PaqCI | CACCTGC | 1 cut(s) | 3107 |
| PasI | CCCWGGG | 1 cut(s) | 3757 |
| PceI | AGGCCT | 1 cut(s) | 1262 |
| PciI | ACATGT | 1 cut(s) | 4446 |
| PctI | GAATGC | 4 cut(s) | 230, 331, 942, 3933 |
| PdiI | GCCGGC | 1 cut(s) | 4214 |
| PdmI | GAANNNNTTC | 3 cut(s) | 2358, 3431, 4107 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 254, 2651 |
| PfoI | TCCNGGA | 2 cut(s) | 3721, 4000 |
| PinAI | ACCGGT | 1 cut(s) | 2268 |
| PleI | GAGTC | 4 cut(s) | 2836, 3143, 3865, 4232 |
| PmaCI | CACGTG | 1 cut(s) | 860 |
| PmlI | CACGTG | 1 cut(s) | 860 |
| PpsI | GAGTC | 4 cut(s) | 2836, 3143, 3865, 4232 |
| Ppu21I | YACGTR | 1 cut(s) | 860 |
| PpuMI | RGGWCCY | 3 cut(s) | 2891, 3493, 3807 |
| PscI | ACATGT | 1 cut(s) | 4446 |
| PshBI | ATTAAT | 1 cut(s) | 870 |
| PsiI | TTATAA | 1 cut(s) | 866 |
| Psp5II | RGGWCCY | 3 cut(s) | 2891, 3493, 3807 |
| PspCI | CACGTG | 1 cut(s) | 860 |
| PspFI | CCCAGC | 1 cut(s) | 3461 |
| PspPPI | RGGWCCY | 3 cut(s) | 2891, 3493, 3807 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1965, 1997 |
| PstI | CTGCAG | 1 cut(s) | 2182 |
| PsuI | RGATCY | 5 cut(s) | 1067, 2056, 2509, 2814, 3485 |
| PvuII | CAGCTG | 2 cut(s) | 3308, 3650 |
| RsaI | GTAC | 5 cut(s) | 286, 706, 1556, 1974, 3630 |
| RsaNI | GTAC | 5 cut(s) | 285, 705, 1555, 1973, 3629 |
| RseI | CAYNNNNRTG | 5 cut(s) | 203, 594, 676, 2129, 3033 |
| SchI | GAGTC | 4 cut(s) | 2836, 3143, 3865, 4233 |
| SduI | GDGCHC | 8 cut(s) | 53, 263, 475, 1227, 1306, 2349, 3928, 4174 |
| SexAI | ACCWGGT | 1 cut(s) | 3631 |
| SfcI | CTRYAG | 4 cut(s) | 405, 1564, 2178, 3963 |
| SfuI | TTCGAA | 1 cut(s) | 4327 |
| SinI | GGWCC | 6 cut(s) | 1709, 2537, 2891, 3493, 3653, 3807 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 203, 594, 676, 2129, 3033 |
| SmlI | CTYRAG | 4 cut(s) | 2529, 2818, 2844, 4061 |
| SmoI | CTYRAG | 4 cut(s) | 2529, 2818, 2844, 4061 |
| SphI | GCATGC | 1 cut(s) | 525 |
| SseBI | AGGCCT | 1 cut(s) | 1262 |
| SspI | AATATT | 2 cut(s) | 1173, 2022 |
| SspMI | CTAG | 8 cut(s) | 741, 1091, 1095, 2060, 2634, 4118, 4236, 4271 |
| StuI | AGGCCT | 1 cut(s) | 1262 |
| StyI | CCWWGG | 5 cut(s) | 2465, 2645, 3180, 3928, 4228 |
| TaiI | ACGT | 2 cut(s) | 42, 862 |
| TaqI | TCGA | 6 cut(s) | 27, 574, 621, 1690, 2712, 4327 |
| TatI | WGTACW | 1 cut(s) | 1972 |
| TauI | GCSGC | 7 cut(s) | 77, 80, 1013, 2752, 3755, 4028, 4517 |
| TseFI | GTSAC | 3 cut(s) | 3157, 4189, 4556 |
| Tsp45I | GTSAC | 3 cut(s) | 3157, 4189, 4556 |
| TspGWI | ACGGA | 2 cut(s) | 142, 3791 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 254, 2651 |
| Vha464I | CTTAAG | 1 cut(s) | 2818 |
| VpaK11BI | GGWCC | 6 cut(s) | 1709, 2537, 2891, 3493, 3653, 3807 |
| VspI | ATTAAT | 1 cut(s) | 870 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 3630, 4121 |
| XapI | RAATTY | 8 cut(s) | 898, 1396, 1601, 2087, 2621, 3281, 3940, 4574 |
| XbaI | TCTAGA | 2 cut(s) | 2059, 2633 |
| XceI | RCATGY | 2 cut(s) | 525, 4450 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 675 |
| XmiI | GTMKAC | 1 cut(s) | 190 |
| XmnI | GAANNNNTTC | 3 cut(s) | 2358, 3431, 4107 |
| XspI | CTAG | 8 cut(s) | 741, 1091, 1095, 2060, 2634, 4118, 4236, 4271 |