Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0008489

Physical Location & Seq

Genomic Coordinates Forward (+)

16315410 .. 16319260

Gene Structure 3851 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG183300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2574 bp

ATGCCTTATGCAGTTTTGGTTGGTGCGCTGAATGACCGGTTGTTGCTTGCTACCCCAACAGAAATAAATCCCAGACAAAAGAAGGGAGTTGAGATTAAGAGTTGTCTTGTTGGGCTCCTTGAACCTCTTCTTATTGGATTTGCCACAATGCAAGAAAGATTTGAGCAGAAGCTTGACCTGCCAGAGATATTGTATCAAATAACATCAAGGTTTGACAGCCTGCGTATCACTCCAAGGTCTCTTGATATTCTGGCCAGAGGCTCTCCTGTTTGTGGAGATCTTTCTGTCTCATTATCTCAAGCAGGACCACAGTTCACACAGGTATTGCGTGGTGTCTATGCTATCAAAGCTCTCCGCTTTTCTACTGCTTTATCTGTTTTAAAAGATGAATTTCTGCGCTCTAGAGATTATCCAAGGTGTCCTCCAACCTCTCATCTGTTCCACCAGTTCCGGCAGTTGGGCTATGCATGTATCAAGTTTGGTCAGTTTGATAGTGCAAAAGAGACCTTTGAAGTCATAGCAGATTATGAAAGTATGCTCGATCTGTTTATATGCCACCTTAACCCTAGTGCCATGCGGCGTCTTGCTCAAAAATTGGAAGAAGATGGCACTGATTCAGAACTGAGGAGATACTGTGAGAGGATCTTAAGAGTGCGCTCTACTGGATGGACTCAAGGCATTTTTGCTAACTTTGCTGCTGAGAGTATGGTTCCGAAGGGTCCTGAATGGGGTGGTGGGAACTGGGAAATCAAAACCCCAACTAATATGAAGGCAATACCTCAATGGGAACTGGCTGCCGAGGTGATGCCATACATGAGGACTGATGACGGTGCCATTCCATCCATTATTGCTGATCATATTGGTGTTTACTTGGGTTCCATCAGAGGACGAGGCAACATTGTAGAAGTAAGGGAAGATAGCTTGGTCAAAACTTTCAAACCCGCAGGTGGTGATAATAAGCCAAATGGTCTTCAAGACTCTTCAGTGACATCTACATCTAATATGTCCAAGGGAGTGCCTGGTGGTGGTTCATTGATGGGTCTTGAAACACTTACCAAACAAGGAGCCAGTTCCACCGCGGCAGATGAACAGGCTAAAGCTGAAGAAGAATTTAAGAAATCTATGTATGGTGCAGCTGATGGTAGCAGCAGTGATGAGGAGGGAACTTCAAAAACTAAAAGGTTACAGATTCGGATAAGAGACAAGCCAATTGCGTCTACCACAGTGGATGTTGATAAGATCAAAGAAGCCACGAAGCAATTCAAACTTGGTGAGGGGTTGGCTCGCCCCAGCAGAACCAAGTCATTGACTGGATCCCAGGACTTGAGCCAGATGTTATCCCAACCGCCTCCAGCCAGTAGTGGTTTTCCAAATGCTCGTGTAGGTTCCGCCCCTGGTGATCTGTTTGGTATGGATGCACCAACACAACCTGCAACTGTATCACAGCAAGCTCCTGTACCAGGTGTGGGAATGACAGCTGGACCAATTCCAGAGGACTTTTTCCAAAATACCATTCCGTCCTTCCAGGTTGCAGCCTCACTGCCCCCTCCTGGAACCTATCTTTCAAAGATGGATCAAGCCTCTCAGGGGGCTGAAAGAAATGCGGAAACACTTAACCAGGTCAATGCACCCAAAGCCAATATAGATCTTCCTGATGGTGGTGTTCCCCCTCAAGCTACTCAACAGAATGTTCCACTGGGGTCCTTTGGACTCCCTGATGGTGGGGTTCCACCACAAGCCCCAAGCCAGGCTGCTGTTCAACAGACTCAGATTCAGTCAGCTCAACCTCCAATATCCACTCAGCCTCTTGATCTAAGTGCCCTTGGCATTCCGAATTCTGCCGATAATGGAAAACCTACTGGGCAGCCTCCTTCACCACCGTCTGCTGTGCGTCCTGGACAGGTTCCCCGTGGAGCAGCCGCTCCTATATGCTTTAAGACTGGCGTATCCCACCTTGAGCAGAATCAACTTTCGGACGCATTATCCTGCTTCGATGAAGCTTTTCTTGCACTAGCGAAGGACCACTCTCGCGGAGCTGATATCAAAGCACAAGCGACCATCTGTGCTCAATATAAGATAGCAGTCACTCTTCTTCAGGAAATTGGCCGGCTTCAGAGAGTCCATGGCCCTAGTGCAATTAGTGCAAAAGATGAGATGGCAAGACTAGCACGCCACCTGGGTTCTTTGCCTCTTCTGGCAAAGCACAGGATAAATTGTATTCGAACTGCCATTAAGAGGAATATGGAAGTGCAAAATTATGCTTATTCAAAACAGATGCTTGAACTCCTGCTGTCCAAAGCACCTCCAAGTAAGCAGGATGAGCTAAGGAGCTTGGTTGACATGTGTGTTCAAAGGGGTCTGTCCAACAAGTCCATTGATCCTCTTGAAGACCCTTCCCAGTTCTGTGCGGCCACACTTAGCCGTCTGTCAACCATTGGATACGATGTTTGTGACCTTTGTGGGGCTAAATTTTCGGCTCTCGCAACGCCTGGTTGCATTATATGCGGTATGGGAAGCATCAAAAGATCAGATGCACTTACAGGGCCGGGGCCTGTTCCTTCGCCGTTCGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

COPI_C

Protein Analysis

857

Amino Acids

91.97

Weight (kDa)

7.79

Isoelectric Point (pI)

47.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008489)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50590 AT3G50590
fragaria_vesca	FvH4_1g15690 FvH4_1g15690 FvH4_1g15690
malus_domestica	MD02G1168900.v1.1 MD15G1280900.v1.1
prunus_persica	Prupe.7G136400_v2.0.a1
pyrus_communis	pycom15g24420 pycom15g24430
rosa_chinensis	RchiOBHm_Chr2g0105001
rosa_laevigata	RLG00000017388
rosa_multiflora	Rmu_co8378509.1_g000001 Rmu_sc0000641.1_g000029
rosa_roxburghii	Rroxscaffold_2G00138590
rosa_rugosa	Rorug02G0124900 Rorug02G0124900
rosa_samantha	Rh2AG175300 Rh2BG183200 Rh2BG183300 Rh2CG180000 Rh2DG181700
rosa_wichuraiana	Rw2G013780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	935
Acc36I	ACCTGC	3 cut(s)	186, 935, 1438
AccB1I	GGYRCC	1 cut(s)	830
AccBSI	CCGCTC	1 cut(s)	1922
AccI	GTMKAC	1 cut(s)	1217
AccII	CGCG	2 cut(s)	1079, 2031
AclWI	GGATC	5 cut(s)	650, 1308, 1321, 1581, 2372
AcoI	YGGCCR	3 cut(s)	252, 2104, 2409
AcsI	RAATTY	4 cut(s)	389, 1109, 1834, 2468
AcuI	CTGAAG	4 cut(s)	966, 1122, 2078, 2096
AcyI	GRCGYC	1 cut(s)	580
AfaI	GTAC	1 cut(s)	1458
AflII	CTTAAG	1 cut(s)	646
AflIII	ACRYGT	1 cut(s)	2340
AgeI	ACCGGT	1 cut(s)	36
AjuI	GAANNNNNNNTTGG	2 cut(s)	1497, 1529
Alw21I	GWGCWC	1 cut(s)	2068
Alw26I	GTCTC	4 cut(s)	243, 292, 497, 1194
AlwI	GGATC	5 cut(s)	650, 1308, 1321, 1581, 2372
AoxI	GGCC	6 cut(s)	252, 2104, 2125, 2409, 2543, 2549
ApeKI	GCWGC	8 cut(s)	695, 794, 1133, 1146, 1532, 1751, 1864, 1916
ApoI	RAATTY	4 cut(s)	389, 1109, 1834, 2468
AsiGI	ACCGGT	1 cut(s)	36
Asp700I	GAANNNNTTC	3 cut(s)	126, 1259, 2001
AspLEI	GCGC	3 cut(s)	28, 399, 657
AspS9I	GGNCC	8 cut(s)	305, 719, 1481, 1701, 2020, 2126, 2543, 2549
AsuC2I	CCSGG	1 cut(s)	2547
AsuHPI	GGTGA	5 cut(s)	814, 962, 1283, 1409, 1866
AsuII	TTCGAA	1 cut(s)	2221
AvaII	GGWCC	5 cut(s)	305, 719, 1481, 1701, 2020
BaeGI	GKGCMC	1 cut(s)	1822
BaeI	ACNNNNGTAYC	2 cut(s)	1929, 1962
BalI	TGGCCA	1 cut(s)	254
BamHI	GGATCC	1 cut(s)	1313
BanI	GGYRCC	1 cut(s)	830
BanII	GRGCYC	1 cut(s)	117
BauI	CACGAG	1 cut(s)	1377
BbsI	GAAGAC	2 cut(s)	962, 2394
Bbv12I	GWGCWC	1 cut(s)	2068
BbvI	GCAGC	8 cut(s)	682, 781, 1145, 1158, 1544, 1738, 1876, 1928
BceAI	ACGGC	2 cut(s)	2406, 2548
BciVI	GTATCC	2 cut(s)	1957, 2432
BclI	TGATCA	1 cut(s)	853
BcnI	CCSGG	1 cut(s)	2547
BcoDI	GTCTC	4 cut(s)	243, 292, 497, 1194
BfaI	CTAG	5 cut(s)	402, 567, 2012, 2130, 2165
BfrI	CTTAAG	1 cut(s)	646
BfuAI	ACCTGC	3 cut(s)	186, 935, 1438
BfuI	GTATCC	2 cut(s)	1957, 2432
BglII	AGATCT	2 cut(s)	277, 1645
Bme18I	GGWCC	5 cut(s)	305, 719, 1481, 1701, 2020
BmgT120I	GGNCC	8 cut(s)	305, 719, 1481, 1701, 2020, 2126, 2543, 2549
BmrI	ACTGGG	4 cut(s)	751, 1706, 1869, 2392
BmsI	GCATC	5 cut(s)	795, 1405, 2265, 2521, 2526
BmuI	ACTGGG	4 cut(s)	751, 1706, 1869, 2392
BpiI	GAAGAC	2 cut(s)	962, 2394
BpmI	CTGGAG	1 cut(s)	1335
Bpu10I	CCTNAGC	1 cut(s)	2324
Bpu14I	TTCGAA	1 cut(s)	2221
BpuEI	CTTGAG	5 cut(s)	282, 657, 1345, 1656, 1976
BpuMI	CCSGG	1 cut(s)	2547
BsaHI	GRCGYC	1 cut(s)	580
BsaI	GGTCTC	2 cut(s)	243, 497
BsaWI	WCCGGW	1 cut(s)	36
BsaXI	ACNNNNNCTCC	2 cut(s)	619, 649
Bse118I	RCCGGY	2 cut(s)	36, 2106
BseGI	GGATG	5 cut(s)	671, 839, 1234, 1420, 2323
BseMII	CTCAG	5 cut(s)	614, 690, 1598, 1781, 1814
BseRI	GAGGAG	2 cut(s)	640, 1172
BseSI	GKGCMC	1 cut(s)	1822
BseXI	GCAGC	8 cut(s)	682, 781, 1145, 1158, 1544, 1738, 1876, 1928
BseYI	CCCAGC	1 cut(s)	1289
BsgI	GTGCAG	1 cut(s)	1152
Bsh1236I	CGCG	2 cut(s)	1079, 2031
BshFI	GGCC	6 cut(s)	254, 2106, 2127, 2411, 2545, 2551
BshNI	GGYRCC	1 cut(s)	830
BshTI	ACCGGT	1 cut(s)	36
BsiHKAI	GWGCWC	1 cut(s)	2068
BsiSI	CCGG	4 cut(s)	37, 451, 2107, 2546
BsmAI	GTCTC	4 cut(s)	243, 292, 497, 1194
BsmI	GAATGC	1 cut(s)	1827
BsnI	GGCC	6 cut(s)	254, 2106, 2127, 2411, 2545, 2551
Bso31I	GGTCTC	2 cut(s)	243, 497
Bsp119I	TTCGAA	1 cut(s)	2221
Bsp1286I	GDGCHC	3 cut(s)	117, 1822, 2068
Bsp19I	CCATGG	1 cut(s)	2122
BspANI	GGCC	6 cut(s)	254, 2106, 2127, 2411, 2545, 2551
BspCNI	CTCAG	5 cut(s)	615, 691, 1597, 1780, 1813
BspFNI	CGCG	2 cut(s)	1079, 2031
BspMI	ACCTGC	3 cut(s)	186, 935, 1438
BspPI	GGATC	5 cut(s)	650, 1308, 1321, 1581, 2372
BspT104I	TTCGAA	1 cut(s)	2221
BspT107I	GGYRCC	1 cut(s)	830
BspTI	CTTAAG	1 cut(s)	646
BspTNI	GGTCTC	2 cut(s)	243, 497
BsrBI	CCGCTC	1 cut(s)	1922
BsrFI	RCCGGY	2 cut(s)	36, 2106
BssAI	RCCGGY	2 cut(s)	36, 2106
BssNI	GRCGYC	1 cut(s)	580
BssSI	CACGAG	1 cut(s)	1377
BssT1I	CCWWGG	5 cut(s)	233, 413, 1008, 1822, 2122
Bst2BI	CACGAG	1 cut(s)	1377
Bst4CI	ACNGT	6 cut(s)	312, 635, 830, 1225, 1438, 1881
Bst6I	CTCTTC	4 cut(s)	132, 985, 2094, 2196
BstACI	GRCGYC	1 cut(s)	580
BstAFI	CTTAAG	1 cut(s)	646
BstAPI	GCANNNNNTGC	2 cut(s)	2141, 2502
BstBI	TTCGAA	1 cut(s)	2221
BstC8I	GCNNGC	6 cut(s)	48, 221, 1285, 1449, 2108, 2170
BstDEI	CTNAG	8 cut(s)	623, 699, 1584, 1767, 1800, 1814, 2324, 2417
BstDSI	CCRYGG	3 cut(s)	1077, 1909, 2122
BstENI	CCTNNNNNAGG	1 cut(s)	1458
BstF5I	GGATG	5 cut(s)	671, 839, 1234, 1420, 2323
BstFNI	CGCG	2 cut(s)	1079, 2031
BstHHI	GCGC	3 cut(s)	28, 399, 657
BstMAI	GTCTC	4 cut(s)	243, 292, 497, 1194
BstMWI	GCNNNNNNNGC	9 cut(s)	178, 347, 692, 1634, 2006, 2141, 2165, 2320, 2502
BstNSI	RCATGY	2 cut(s)	471, 2344
BstSLI	GKGCMC	1 cut(s)	1822
BstUI	CGCG	2 cut(s)	1079, 2031
BstV1I	GCAGC	8 cut(s)	682, 781, 1145, 1158, 1544, 1738, 1876, 1928
BstV2I	GAAGAC	2 cut(s)	962, 2394
BstX2I	RGATCY	4 cut(s)	277, 642, 1313, 1645
BstYI	RGATCY	4 cut(s)	277, 642, 1313, 1645
BsuI	GTATCC	2 cut(s)	1957, 2432
BsuRI	GGCC	6 cut(s)	254, 2106, 2127, 2411, 2545, 2551
BtgI	CCRYGG	3 cut(s)	1077, 1909, 2122
BtsCI	GGATG	5 cut(s)	671, 839, 1234, 1420, 2323
BtsI	GCAGTG	2 cut(s)	1156, 1538
BtsIMutI	CAGTG	6 cut(s)	609, 990, 1156, 1230, 1538, 1694
BveI	ACCTGC	3 cut(s)	186, 935, 1438
Cac8I	GCNNGC	6 cut(s)	48, 221, 1285, 1449, 2108, 2170
CfoI	GCGC	3 cut(s)	28, 399, 657
Cfr10I	RCCGGY	2 cut(s)	36, 2106
Cfr13I	GGNCC	8 cut(s)	305, 719, 1481, 1701, 2020, 2126, 2543, 2549
Cfr42I	CCGCGG	1 cut(s)	1080
CseI	GACGC	4 cut(s)	569, 1203, 1880, 1985
CsiI	ACCWGGT	2 cut(s)	1459, 1617
Csp6I	GTAC	1 cut(s)	1457
CspAI	ACCGGT	1 cut(s)	36
CviAII	CATG	5 cut(s)	468, 574, 814, 2123, 2341
CviQI	GTAC	1 cut(s)	1457
DdeI	CTNAG	8 cut(s)	623, 699, 1584, 1767, 1800, 1814, 2324, 2417
DraI	TTTAAA	1 cut(s)	381
EaeI	YGGCCR	3 cut(s)	252, 2104, 2409
Eam1104I	CTCTTC	4 cut(s)	132, 985, 2094, 2196
EarI	CTCTTC	4 cut(s)	132, 985, 2094, 2196
EciI	GGCGGA	1 cut(s)	1378
Eco130I	CCWWGG	5 cut(s)	233, 413, 1008, 1822, 2122
Eco24I	GRGCYC	1 cut(s)	117
Eco31I	GGTCTC	2 cut(s)	243, 497
Eco32I	GATATC	1 cut(s)	2041
Eco47I	GGWCC	5 cut(s)	305, 719, 1481, 1701, 2020
Eco57I	CTGAAG	4 cut(s)	966, 1122, 2078, 2096
EcoNI	CCTNNNNNAGG	1 cut(s)	1458
EcoO109I	RGGNCCY	3 cut(s)	719, 1701, 2549
EcoRI	GAATTC	1 cut(s)	1834
EcoRV	GATATC	1 cut(s)	2041
EcoT14I	CCWWGG	5 cut(s)	233, 413, 1008, 1822, 2122
EcoT22I	ATGCAT	1 cut(s)	469
EcoT38I	GRGCYC	1 cut(s)	117
ErhI	CCWWGG	5 cut(s)	233, 413, 1008, 1822, 2122
FaeI	CATG	5 cut(s)	471, 577, 817, 2126, 2344
FalI	AAGNNNNNCTT	2 cut(s)	1989, 2021
FatI	CATG	5 cut(s)	467, 573, 813, 2122, 2340
FauI	CCCGC	1 cut(s)	949
FbaI	TGATCA	1 cut(s)	853
FblI	GTMKAC	1 cut(s)	1217
FokI	GGATG	5 cut(s)	678, 826, 1241, 1427, 2330
FriOI	GRGCYC	1 cut(s)	117
FspBI	CTAG	5 cut(s)	402, 567, 2012, 2130, 2165
GlaI	GCGC	3 cut(s)	27, 398, 656
GsaI	CCCAGC	1 cut(s)	1293
GsuI	CTGGAG	1 cut(s)	1335
HaeIII	GGCC	6 cut(s)	254, 2106, 2127, 2411, 2545, 2551
HapII	CCGG	4 cut(s)	37, 451, 2107, 2546
HgaI	GACGC	4 cut(s)	569, 1203, 1880, 1985
HhaI	GCGC	3 cut(s)	28, 399, 657
Hin1I	GRCGYC	1 cut(s)	580
Hin1II	CATG	5 cut(s)	471, 577, 817, 2126, 2344
Hin6I	GCGC	3 cut(s)	26, 397, 655
HinP1I	GCGC	3 cut(s)	26, 397, 655
HincII	GTYRAC	2 cut(s)	2338, 2430
HindII	GTYRAC	2 cut(s)	2338, 2430
HindIII	AAGCTT	2 cut(s)	170, 1998
HinfI	GANTC	9 cut(s)	614, 670, 977, 1189, 1710, 1765, 1771, 1963, 2118
HpaII	CCGG	4 cut(s)	37, 451, 2107, 2546
HphI	GGTGA	5 cut(s)	814, 962, 1283, 1409, 1866
Hpy166II	GTNNAC	5 cut(s)	315, 868, 1218, 2338, 2430
Hpy188I	TCNGA	9 cut(s)	619, 714, 884, 1194, 1770, 1833, 1975, 2115, 2530
Hpy8I	GTNNAC	5 cut(s)	315, 868, 1218, 2338, 2430
HpyAV	CCTTC	8 cut(s)	76, 709, 763, 1531, 1881, 2011, 2403, 2568
HpyCH4III	ACNGT	6 cut(s)	312, 635, 830, 1225, 1438, 1881
HpyF10VI	GCNNNNNNNGC	9 cut(s)	178, 347, 692, 1634, 2006, 2141, 2165, 2320, 2502
HpyF3I	CTNAG	8 cut(s)	623, 699, 1584, 1767, 1800, 1814, 2324, 2417
Hsp92I	GRCGYC	1 cut(s)	580
Hsp92II	CATG	5 cut(s)	471, 577, 817, 2126, 2344
HspAI	GCGC	3 cut(s)	26, 397, 655
KroI	GCCGGC	1 cut(s)	2106
KroNI	GCCGGC	1 cut(s)	2108
Ksp22I	TGATCA	1 cut(s)	853
KspI	CCGCGG	1 cut(s)	1080
LmnI	GCTCC	7 cut(s)	120, 1064, 1456, 1913, 1927, 2033, 2328
Lsp1109I	GCAGC	8 cut(s)	682, 781, 1145, 1158, 1544, 1738, 1876, 1928
LweI	GCATC	5 cut(s)	795, 1405, 2265, 2521, 2526
MabI	ACCWGGT	2 cut(s)	1459, 1617
MaeI	CTAG	5 cut(s)	402, 567, 2012, 2130, 2165
MaeIII	GTNAC	4 cut(s)	985, 1182, 2083, 2450
MbiI	CCGCTC	1 cut(s)	1922
MfeI	CAATTG	1 cut(s)	1209
MflI	RGATCY	4 cut(s)	277, 642, 1313, 1645
MhlI	GDGCHC	3 cut(s)	117, 1822, 2068
MlsI	TGGCCA	1 cut(s)	254
MluNI	TGGCCA	1 cut(s)	254
MlyI	GAGTC	5 cut(s)	664, 971, 1704, 1759, 2127
MmeI	TCCRAC	2 cut(s)	449, 2388
Mox20I	TGGCCA	1 cut(s)	254
Mph1103I	ATGCAT	1 cut(s)	469
MroNI	GCCGGC	1 cut(s)	2106
MroXI	GAANNNNTTC	3 cut(s)	126, 1259, 2001
MscI	TGGCCA	1 cut(s)	254
MseI	TTAA	8 cut(s)	96, 380, 561, 647, 1113, 1614, 1935, 2232
MslI	CAYNNNNRTG	1 cut(s)	861
Msp20I	TGGCCA	1 cut(s)	254
MspA1I	CMGCKG	3 cut(s)	1079, 1136, 1478
MspCI	CTTAAG	1 cut(s)	646
MspI	CCGG	4 cut(s)	37, 451, 2107, 2546
MunI	CAATTG	1 cut(s)	1209
Mva1269I	GAATGC	1 cut(s)	1827
MvnI	CGCG	2 cut(s)	1079, 2031
MwoI	GCNNNNNNNGC	9 cut(s)	178, 347, 692, 1634, 2006, 2141, 2165, 2320, 2502
NaeI	GCCGGC	1 cut(s)	2108
NciI	CCSGG	1 cut(s)	2547
NcoI	CCATGG	1 cut(s)	2122
NgoMIV	GCCGGC	1 cut(s)	2106
NlaIII	CATG	5 cut(s)	471, 577, 817, 2126, 2344
NmeAIII	GCCGAG	1 cut(s)	823
NmuCI	GTSAC	3 cut(s)	985, 2083, 2450
NsiI	ATGCAT	1 cut(s)	469
NspI	RCATGY	2 cut(s)	471, 2344
NspV	TTCGAA	1 cut(s)	2221
PaqCI	CACCTGC	1 cut(s)	935
PciI	ACATGT	1 cut(s)	2340
PctI	GAATGC	1 cut(s)	1827
PdiI	GCCGGC	1 cut(s)	2108
PdmI	GAANNNNTTC	3 cut(s)	126, 1259, 2001
PfeI	GAWTC	4 cut(s)	614, 1189, 1771, 1963
PfoI	TCCNGGA	2 cut(s)	1549, 1894
PinAI	ACCGGT	1 cut(s)	36
PleI	GAGTC	5 cut(s)	664, 971, 1704, 1759, 2126
PpsI	GAGTC	5 cut(s)	664, 971, 1704, 1759, 2126
PpuMI	RGGWCCY	2 cut(s)	719, 1701
PscI	ACATGT	1 cut(s)	2340
Psp5II	RGGWCCY	2 cut(s)	719, 1701
PspFI	CCCAGC	1 cut(s)	1289
PspPI	GGNCC	8 cut(s)	305, 719, 1481, 1701, 2020, 2126, 2543, 2549
PspPPI	RGGWCCY	2 cut(s)	719, 1701
PsuI	RGATCY	4 cut(s)	277, 642, 1313, 1645
PvuII	CAGCTG	2 cut(s)	1136, 1478
RsaI	GTAC	1 cut(s)	1458
RsaNI	GTAC	1 cut(s)	1457
RseI	CAYNNNNRTG	1 cut(s)	861
SacII	CCGCGG	1 cut(s)	1080
SaqAI	TTAA	8 cut(s)	96, 380, 561, 647, 1113, 1614, 1935, 2232
Sau96I	GGNCC	8 cut(s)	305, 719, 1481, 1701, 2020, 2126, 2543, 2549
SchI	GAGTC	5 cut(s)	664, 971, 1704, 1759, 2127
SduI	GDGCHC	3 cut(s)	117, 1822, 2068
SexAI	ACCWGGT	2 cut(s)	1459, 1617
SfaNI	GCATC	5 cut(s)	795, 1405, 2265, 2521, 2526
Sfr303I	CCGCGG	1 cut(s)	1080
SfuI	TTCGAA	1 cut(s)	2221
SgrBI	CCGCGG	1 cut(s)	1080
SinI	GGWCC	5 cut(s)	305, 719, 1481, 1701, 2020
SmiMI	CAYNNNNRTG	1 cut(s)	861
SmlI	CTYRAG	6 cut(s)	297, 646, 672, 1324, 1671, 1955
SmoI	CTYRAG	6 cut(s)	297, 646, 672, 1324, 1671, 1955
SspMI	CTAG	5 cut(s)	402, 567, 2012, 2130, 2165
StyI	CCWWGG	5 cut(s)	233, 413, 1008, 1822, 2122
TaaI	ACNGT	6 cut(s)	312, 635, 830, 1225, 1438, 1881
TaqI	TCGA	3 cut(s)	540, 1992, 2221
TauI	GCSGC	4 cut(s)	580, 1082, 1922, 2411
TfiI	GAWTC	4 cut(s)	614, 1189, 1771, 1963
Tru1I	TTAA	8 cut(s)	96, 380, 561, 647, 1113, 1614, 1935, 2232
Tru9I	TTAA	8 cut(s)	96, 380, 561, 647, 1113, 1614, 1935, 2232
TscAI	CASTG	6 cut(s)	616, 990, 1156, 1230, 1545, 1701
TseFI	GTSAC	3 cut(s)	985, 2083, 2450
TseI	GCWGC	8 cut(s)	695, 794, 1133, 1146, 1532, 1751, 1864, 1916
Tsp45I	GTSAC	3 cut(s)	985, 2083, 2450
TspDTI	ATGAA	6 cut(s)	402, 543, 782, 1020, 1101, 2010
TspGWI	ACGGA	1 cut(s)	1506
TspRI	CASTG	6 cut(s)	616, 990, 1156, 1230, 1545, 1701
Vha464I	CTTAAG	1 cut(s)	646
VpaK11BI	GGWCC	5 cut(s)	305, 719, 1481, 1701, 2020
XagI	CCTNNNNNAGG	1 cut(s)	1458
XapI	RAATTY	4 cut(s)	389, 1109, 1834, 2468
XbaI	TCTAGA	1 cut(s)	401
XceI	RCATGY	2 cut(s)	471, 2344
XmiI	GTMKAC	1 cut(s)	1217
XmnI	GAANNNNTTC	3 cut(s)	126, 1259, 2001
XspI	CTAG	5 cut(s)	402, 567, 2012, 2130, 2165
Zsp2I	ATGCAT	1 cut(s)	469

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.