Nicotinate
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G23420 AT2G23420 AT4G36940 |
| fragaria_vesca | FvH4_1g16212 FvH4_1g16212 FvH4_1g16212 |
| malus_domestica | MD02G1174500.v1.1 MD15G1285500.v1.1 |
| prunus_persica | Prupe.7G131500_v2.0.a1 Prupe.7G131500_v2.0.a1 |
| pyrus_communis | pycom02g14080 pycom15g24850 |
| rosa_chinensis | RchiOBHm_Chr1g0342971 RchiOBHm_Chr2g0105921 RchiOBHm_Chr7g0236011 |
| rosa_laevigata | RLG00000017470 |
| rosa_multiflora | Rmu_sc0004367.1_g000012 Rmu_sc0008183.1_g000025 Rmu_sc0011173.1_g000015 |
| rosa_roxburghii | Rroxscaffold_2G00137570 Rroxscaffold_2G00137720 |
| rosa_rugosa | Rorug02G0132000 |
| rosa_samantha | Rh2BG192500 Rh2DG189000 Rh7BG420500 Rh7CG469100 |
| rosa_wichuraiana | Rw2G014320 Rw7G037310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1435 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 653 |
| AccI | GTMKAC | 1 cut(s) | 897 |
| AccII | CGCG | 2 cut(s) | 273, 1446 |
| AccIII | TCCGGA | 1 cut(s) | 165 |
| AciI | CCGC | 6 cut(s) | 5, 183, 271, 416, 1300, 1613 |
| AclWI | GGATC | 1 cut(s) | 93 |
| AcoI | YGGCCR | 1 cut(s) | 733 |
| AcsI | RAATTY | 3 cut(s) | 10, 1058, 1389 |
| AcuI | CTGAAG | 1 cut(s) | 1284 |
| AdeI | CACNNNGTG | 1 cut(s) | 653 |
| AfaI | GTAC | 7 cut(s) | 367, 584, 742, 971, 1068, 1595, 1622 |
| AfeI | AGCGCT | 1 cut(s) | 1532 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 82, 182, 563, 653, 987, 1076, 1379 |
| AgsI | TTSAA | 6 cut(s) | 241, 404, 425, 448, 1222, 1451 |
| AjnI | CCWGG | 5 cut(s) | 591, 762, 1335, 1474, 1483 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1644, 1676 |
| AluBI | AGCT | 9 cut(s) | 146, 371, 626, 681, 841, 890, 1097, 1202, 1225 |
| AluI | AGCT | 9 cut(s) | 146, 371, 626, 681, 841, 890, 1097, 1202, 1225 |
| Alw26I | GTCTC | 3 cut(s) | 818, 1285, 1570 |
| AlwI | GGATC | 1 cut(s) | 93 |
| Aor13HI | TCCGGA | 1 cut(s) | 165 |
| Aor51HI | AGCGCT | 1 cut(s) | 1532 |
| AoxI | GGCC | 5 cut(s) | 19, 105, 407, 733, 1472 |
| ApeKI | GCWGC | 7 cut(s) | 485, 623, 845, 977, 1202, 1479, 1533 |
| ApoI | RAATTY | 3 cut(s) | 10, 1058, 1389 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 176, 635, 661, 1037, 1389, 1466 |
| AspLEI | GCGC | 3 cut(s) | 49, 1446, 1533 |
| AspS9I | GGNCC | 3 cut(s) | 20, 407, 554 |
| AsuHPI | GGTGA | 4 cut(s) | 61, 91, 1013, 1394 |
| AsuII | TTCGAA | 1 cut(s) | 14 |
| AsuNHI | GCTAGC | 1 cut(s) | 841 |
| AvaII | GGWCC | 1 cut(s) | 554 |
| AxyI | CCTNAGG | 1 cut(s) | 360 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 357, 390 |
| BalI | TGGCCA | 1 cut(s) | 735 |
| BanI | GGYRCC | 1 cut(s) | 1435 |
| BanII | GRGCYC | 1 cut(s) | 550 |
| BbsI | GAAGAC | 1 cut(s) | 276 |
| BbvI | GCAGC | 7 cut(s) | 472, 635, 857, 989, 1189, 1491, 1520 |
| BccI | CCATC | 3 cut(s) | 293, 554, 725 |
| BceAI | ACGGC | 3 cut(s) | 34, 926, 1576 |
| BciT130I | CCWGG | 5 cut(s) | 593, 764, 1337, 1476, 1485 |
| BciVI | GTATCC | 1 cut(s) | 636 |
| BcoDI | GTCTC | 3 cut(s) | 818, 1285, 1570 |
| BfaI | CTAG | 5 cut(s) | 489, 842, 887, 1007, 1098 |
| BfoI | RGCGCY | 1 cut(s) | 1534 |
| BfuI | GTATCC | 1 cut(s) | 636 |
| BglII | AGATCT | 1 cut(s) | 1501 |
| BisI | GCNGC | 9 cut(s) | 6, 184, 486, 624, 846, 978, 1203, 1480, 1534 |
| BlsI | GCNGC | 9 cut(s) | 7, 185, 487, 625, 847, 979, 1204, 1481, 1535 |
| BmcAI | AGTACT | 1 cut(s) | 742 |
| Bme1390I | CCNGG | 5 cut(s) | 593, 764, 1337, 1476, 1485 |
| Bme18I | GGWCC | 1 cut(s) | 554 |
| BmgT120I | GGNCC | 3 cut(s) | 20, 407, 554 |
| BmiI | GGNNCC | 5 cut(s) | 387, 555, 658, 1174, 1437 |
| BmrFI | CCNGG | 5 cut(s) | 593, 764, 1337, 1476, 1485 |
| BmsI | GCATC | 5 cut(s) | 228, 473, 502, 584, 1117 |
| BmtI | GCTAGC | 1 cut(s) | 845 |
| BpiI | GAAGAC | 1 cut(s) | 276 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1142, 1174 |
| BpmI | CTGGAG | 1 cut(s) | 528 |
| Bpu10I | CCTNAGC | 1 cut(s) | 549 |
| Bpu14I | TTCGAA | 1 cut(s) | 14 |
| BpuEI | CTTGAG | 3 cut(s) | 548, 1182, 1532 |
| BsaI | GGTCTC | 2 cut(s) | 818, 1285 |
| BsaJI | CCNNGG | 5 cut(s) | 102, 592, 1070, 1335, 1483 |
| BsaWI | WCCGGW | 1 cut(s) | 165 |
| BsaXI | ACNNNNNCTCC | 3 cut(s) | 330, 360, 1658 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 82, 182, 563, 653, 987, 1076, 1379 |
| Bse118I | RCCGGY | 2 cut(s) | 125, 203 |
| Bse1I | ACTGG | 2 cut(s) | 94, 122 |
| Bse21I | CCTNAGG | 1 cut(s) | 360 |
| Bse3DI | GCAATG | 2 cut(s) | 42, 228 |
| BseAI | TCCGGA | 1 cut(s) | 165 |
| BseBI | CCWGG | 5 cut(s) | 593, 764, 1337, 1476, 1485 |
| BseDI | CCNNGG | 5 cut(s) | 102, 592, 1070, 1335, 1483 |
| BseGI | GGATG | 3 cut(s) | 259, 304, 1132 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 82, 182, 563, 653, 987, 1076, 1379 |
| BseMI | GCAATG | 2 cut(s) | 42, 228 |
| BseMII | CTCAG | 3 cut(s) | 240, 351, 563 |
| BseNI | ACTGG | 2 cut(s) | 94, 122 |
| BseRI | GAGGAG | 3 cut(s) | 336, 931, 1588 |
| BseXI | GCAGC | 7 cut(s) | 472, 635, 857, 989, 1189, 1491, 1520 |
| BseYI | CCCAGC | 1 cut(s) | 626 |
| BsgI | GTGCAG | 1 cut(s) | 1027 |
| Bsh1236I | CGCG | 2 cut(s) | 273, 1446 |
| BshFI | GGCC | 5 cut(s) | 21, 107, 409, 735, 1474 |
| BshNI | GGYRCC | 1 cut(s) | 1435 |
| BsiSI | CCGG | 4 cut(s) | 126, 166, 204, 981 |
| BslFI | GGGAC | 2 cut(s) | 567, 1545 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 82, 182, 563, 653, 987, 1076, 1379 |
| BsmAI | GTCTC | 3 cut(s) | 818, 1285, 1570 |
| BsmFI | GGGAC | 2 cut(s) | 567, 1545 |
| BsmI | GAATGC | 4 cut(s) | 221, 487, 848, 869 |
| BsnI | GGCC | 5 cut(s) | 21, 107, 409, 735, 1474 |
| Bso31I | GGTCTC | 2 cut(s) | 818, 1285 |
| Bsp119I | TTCGAA | 1 cut(s) | 14 |
| Bsp1286I | GDGCHC | 1 cut(s) | 550 |
| Bsp13I | TCCGGA | 1 cut(s) | 165 |
| Bsp143I | GATC | 3 cut(s) | 85, 1105, 1501 |
| Bsp19I | CCATGG | 1 cut(s) | 102 |
| BspACI | CCGC | 6 cut(s) | 5, 183, 271, 416, 1300, 1613 |
| BspANI | GGCC | 5 cut(s) | 21, 107, 409, 735, 1474 |
| BspCNI | CTCAG | 3 cut(s) | 241, 352, 562 |
| BspEI | TCCGGA | 1 cut(s) | 165 |
| BspFNI | CGCG | 2 cut(s) | 273, 1446 |
| BspHI | TCATGA | 1 cut(s) | 1147 |
| BspLI | GGNNCC | 5 cut(s) | 387, 555, 658, 1174, 1437 |
| BspOI | GCTAGC | 1 cut(s) | 845 |
| BspPI | GGATC | 1 cut(s) | 93 |
| BspT104I | TTCGAA | 1 cut(s) | 14 |
| BspT107I | GGYRCC | 1 cut(s) | 1435 |
| BspTNI | GGTCTC | 2 cut(s) | 818, 1285 |
| BsrDI | GCAATG | 2 cut(s) | 42, 228 |
| BsrFI | RCCGGY | 2 cut(s) | 125, 203 |
| BsrI | ACTGG | 2 cut(s) | 94, 122 |
| BssAI | RCCGGY | 2 cut(s) | 125, 203 |
| BssECI | CCNNGG | 5 cut(s) | 102, 592, 1070, 1335, 1483 |
| BssMI | GATC | 3 cut(s) | 85, 1105, 1501 |
| BssT1I | CCWWGG | 2 cut(s) | 102, 1070 |
| Bst2UI | CCWGG | 5 cut(s) | 593, 764, 1337, 1476, 1485 |
| Bst4CI | ACNGT | 2 cut(s) | 587, 1314 |
| BstBI | TTCGAA | 1 cut(s) | 14 |
| BstC8I | GCNNGC | 3 cut(s) | 127, 131, 843 |
| BstDEI | CTNAG | 4 cut(s) | 249, 317, 360, 549 |
| BstDSI | CCRYGG | 1 cut(s) | 102 |
| BstEII | GGTNACC | 2 cut(s) | 67, 1001 |
| BstF5I | GGATG | 3 cut(s) | 259, 304, 1132 |
| BstFNI | CGCG | 2 cut(s) | 273, 1446 |
| BstH2I | RGCGCY | 1 cut(s) | 1534 |
| BstHHI | GCGC | 3 cut(s) | 49, 1446, 1533 |
| BstKTI | GATC | 3 cut(s) | 88, 1108, 1504 |
| BstMAI | GTCTC | 3 cut(s) | 818, 1285, 1570 |
| BstMBI | GATC | 3 cut(s) | 85, 1105, 1501 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 270, 482, 732, 1202 |
| BstNI | CCWGG | 5 cut(s) | 593, 764, 1337, 1476, 1485 |
| BstPI | GGTNACC | 2 cut(s) | 67, 1001 |
| BstSCI | CCNGG | 5 cut(s) | 591, 762, 1335, 1474, 1483 |
| BstUI | CGCG | 2 cut(s) | 273, 1446 |
| BstV1I | GCAGC | 7 cut(s) | 472, 635, 857, 989, 1189, 1491, 1520 |
| BstV2I | GAAGAC | 1 cut(s) | 276 |
| BstX2I | RGATCY | 2 cut(s) | 85, 1501 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 64 |
| BstYI | RGATCY | 2 cut(s) | 85, 1501 |
| Bsu36I | CCTNAGG | 1 cut(s) | 360 |
| BsuI | GTATCC | 1 cut(s) | 636 |
| BsuRI | GGCC | 5 cut(s) | 21, 107, 409, 735, 1474 |
| BtgI | CCRYGG | 1 cut(s) | 102 |
| BtsCI | GGATG | 3 cut(s) | 259, 304, 1132 |
| BtsI | GCAGTG | 1 cut(s) | 733 |
| BtsIMutI | CAGTG | 2 cut(s) | 733, 797 |
| Cac8I | GCNNGC | 3 cut(s) | 127, 131, 843 |
| CciI | TCATGA | 1 cut(s) | 1147 |
| CfoI | GCGC | 3 cut(s) | 49, 1446, 1533 |
| Cfr10I | RCCGGY | 2 cut(s) | 125, 203 |
| Cfr13I | GGNCC | 3 cut(s) | 20, 407, 554 |
| CseI | GACGC | 1 cut(s) | 1547 |
| Csp6I | GTAC | 7 cut(s) | 366, 583, 741, 970, 1067, 1594, 1621 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 399, 434 |
| CviAII | CATG | 6 cut(s) | 103, 605, 668, 1020, 1148, 1570 |
| CviQI | GTAC | 7 cut(s) | 366, 583, 741, 970, 1067, 1594, 1621 |
| DdeI | CTNAG | 4 cut(s) | 249, 317, 360, 549 |
| DpnI | GATC | 3 cut(s) | 87, 1107, 1503 |
| DpnII | GATC | 3 cut(s) | 85, 1105, 1501 |
| DraI | TTTAAA | 1 cut(s) | 1134 |
| DraIII | CACNNNGTG | 1 cut(s) | 653 |
| EaeI | YGGCCR | 1 cut(s) | 733 |
| Eco130I | CCWWGG | 2 cut(s) | 102, 1070 |
| Eco24I | GRGCYC | 1 cut(s) | 550 |
| Eco31I | GGTCTC | 2 cut(s) | 818, 1285 |
| Eco32I | GATATC | 1 cut(s) | 259 |
| Eco47I | GGWCC | 1 cut(s) | 554 |
| Eco47III | AGCGCT | 1 cut(s) | 1532 |
| Eco57I | CTGAAG | 1 cut(s) | 1284 |
| Eco81I | CCTNAGG | 1 cut(s) | 360 |
| Eco91I | GGTNACC | 2 cut(s) | 67, 1001 |
| EcoO109I | RGGNCCY | 1 cut(s) | 554 |
| EcoO65I | GGTNACC | 2 cut(s) | 67, 1001 |
| EcoRI | GAATTC | 2 cut(s) | 10, 1389 |
| EcoRII | CCWGG | 5 cut(s) | 591, 762, 1335, 1474, 1483 |
| EcoRV | GATATC | 1 cut(s) | 259 |
| EcoT14I | CCWWGG | 2 cut(s) | 102, 1070 |
| EcoT22I | ATGCAT | 3 cut(s) | 221, 466, 865 |
| EcoT38I | GRGCYC | 1 cut(s) | 550 |
| ErhI | CCWWGG | 2 cut(s) | 102, 1070 |
| FaeI | CATG | 6 cut(s) | 106, 608, 671, 1023, 1151, 1573 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 161, 193 |
| FaqI | GGGAC | 2 cut(s) | 567, 1545 |
| FatI | CATG | 6 cut(s) | 102, 604, 667, 1019, 1147, 1569 |
| FauNDI | CATATG | 3 cut(s) | 859, 904, 1429 |
| FblI | GTMKAC | 1 cut(s) | 897 |
| Fnu4HI | GCNGC | 9 cut(s) | 6, 184, 486, 624, 846, 978, 1203, 1480, 1534 |
| FokI | GGATG | 3 cut(s) | 266, 311, 1139 |
| FriOI | GRGCYC | 1 cut(s) | 550 |
| Fsp4HI | GCNGC | 9 cut(s) | 6, 184, 486, 624, 846, 978, 1203, 1480, 1534 |
| FspBI | CTAG | 5 cut(s) | 489, 842, 887, 1007, 1098 |
| GlaI | GCGC | 3 cut(s) | 48, 1445, 1532 |
| GluI | GCNGC | 9 cut(s) | 6, 184, 486, 624, 846, 978, 1203, 1480, 1534 |
| GsaI | CCCAGC | 1 cut(s) | 630 |
| GsuI | CTGGAG | 1 cut(s) | 528 |
| HaeII | RGCGCY | 1 cut(s) | 1534 |
| HaeIII | GGCC | 5 cut(s) | 21, 107, 409, 735, 1474 |
| HapII | CCGG | 4 cut(s) | 126, 166, 204, 981 |
| HgaI | GACGC | 1 cut(s) | 1547 |
| HhaI | GCGC | 3 cut(s) | 49, 1446, 1533 |
| Hin1II | CATG | 6 cut(s) | 106, 608, 671, 1023, 1151, 1573 |
| Hin6I | GCGC | 3 cut(s) | 47, 1444, 1531 |
| HinP1I | GCGC | 3 cut(s) | 47, 1444, 1531 |
| HincII | GTYRAC | 1 cut(s) | 1156 |
| HindII | GTYRAC | 1 cut(s) | 1156 |
| HindIII | AAGCTT | 1 cut(s) | 1223 |
| HpaII | CCGG | 4 cut(s) | 126, 166, 204, 981 |
| HphI | GGTGA | 4 cut(s) | 61, 91, 1013, 1394 |
| Hpy166II | GTNNAC | 3 cut(s) | 99, 898, 1156 |
| Hpy188I | TCNGA | 5 cut(s) | 224, 771, 1032, 1110, 1264 |
| Hpy188III | TCNNGA | 8 cut(s) | 166, 336, 359, 640, 695, 1148, 1549, 1562 |
| Hpy8I | GTNNAC | 3 cut(s) | 99, 898, 1156 |
| Hpy99I | CGWCG | 1 cut(s) | 546 |
| HpyAV | CCTTC | 4 cut(s) | 187, 398, 1270, 1319 |
| HpyCH4III | ACNGT | 2 cut(s) | 587, 1314 |
| HpyCH4V | TGCA | 8 cut(s) | 219, 464, 608, 623, 863, 1044, 1536, 1672 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 270, 482, 732, 1202 |
| HpyF3I | CTNAG | 4 cut(s) | 249, 317, 360, 549 |
| Hsp92II | CATG | 6 cut(s) | 106, 608, 671, 1023, 1151, 1573 |
| HspAI | GCGC | 3 cut(s) | 47, 1444, 1531 |
| Kpn2I | TCCGGA | 1 cut(s) | 165 |
| KroI | GCCGGC | 1 cut(s) | 125 |
| KroNI | GCCGGC | 1 cut(s) | 127 |
| Kzo9I | GATC | 3 cut(s) | 85, 1105, 1501 |
| LmnI | GCTCC | 2 cut(s) | 1490, 1528 |
| Lsp1109I | GCAGC | 7 cut(s) | 472, 635, 857, 989, 1189, 1491, 1520 |
| LweI | GCATC | 5 cut(s) | 228, 473, 502, 584, 1117 |
| MaeI | CTAG | 5 cut(s) | 489, 842, 887, 1007, 1098 |
| MaeIII | GTNAC | 7 cut(s) | 67, 587, 1001, 1183, 1270, 1304, 1400 |
| MalI | GATC | 3 cut(s) | 87, 1107, 1503 |
| MboI | GATC | 3 cut(s) | 85, 1105, 1501 |
| MboII | GAAGA | 8 cut(s) | 181, 224, 276, 279, 1045, 1277, 1463, 1511 |
| MfeI | CAATTG | 2 cut(s) | 411, 425 |
| MflI | RGATCY | 2 cut(s) | 85, 1501 |
| MhlI | GDGCHC | 1 cut(s) | 550 |
| MlsI | TGGCCA | 1 cut(s) | 735 |
| MluNI | TGGCCA | 1 cut(s) | 735 |
| MlyI | GAGTC | 2 cut(s) | 700, 1151 |
| MmeI | TCCRAC | 1 cut(s) | 972 |
| Mox20I | TGGCCA | 1 cut(s) | 735 |
| Mph1103I | ATGCAT | 3 cut(s) | 221, 466, 865 |
| MroI | TCCGGA | 1 cut(s) | 165 |
| MroNI | GCCGGC | 1 cut(s) | 125 |
| MroXI | GAANNNNTTC | 6 cut(s) | 176, 635, 661, 1037, 1389, 1466 |
| MscI | TGGCCA | 1 cut(s) | 735 |
| MseI | TTAA | 7 cut(s) | 342, 456, 779, 806, 1133, 1410, 1514 |
| MslI | CAYNNNNRTG | 2 cut(s) | 666, 726 |
| Msp20I | TGGCCA | 1 cut(s) | 735 |
| MspA1I | CMGCKG | 2 cut(s) | 371, 626 |
| MspI | CCGG | 4 cut(s) | 126, 166, 204, 981 |
| MspR9I | CCNGG | 5 cut(s) | 593, 764, 1337, 1476, 1485 |
| MunI | CAATTG | 2 cut(s) | 411, 425 |
| Mva1269I | GAATGC | 4 cut(s) | 221, 487, 848, 869 |
| MvaI | CCWGG | 5 cut(s) | 593, 764, 1337, 1476, 1485 |
| MvnI | CGCG | 2 cut(s) | 273, 1446 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 270, 482, 732, 1202 |
| NaeI | GCCGGC | 1 cut(s) | 127 |
| NcoI | CCATGG | 1 cut(s) | 102 |
| NdeI | CATATG | 3 cut(s) | 859, 904, 1429 |
| NdeII | GATC | 3 cut(s) | 85, 1105, 1501 |
| NgoMIV | GCCGGC | 1 cut(s) | 125 |
| NheI | GCTAGC | 1 cut(s) | 841 |
| NlaIII | CATG | 6 cut(s) | 106, 608, 671, 1023, 1151, 1573 |
| NlaIV | GGNNCC | 5 cut(s) | 387, 555, 658, 1174, 1437 |
| NmuCI | GTSAC | 3 cut(s) | 67, 1001, 1400 |
| NsiI | ATGCAT | 3 cut(s) | 221, 466, 865 |
| NspV | TTCGAA | 1 cut(s) | 14 |
| PagI | TCATGA | 1 cut(s) | 1147 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 20 |
| PctI | GAATGC | 4 cut(s) | 221, 487, 848, 869 |
| PdiI | GCCGGC | 1 cut(s) | 127 |
| PdmI | GAANNNNTTC | 6 cut(s) | 176, 635, 661, 1037, 1389, 1466 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 653 |
| PkrI | GCNGC | 9 cut(s) | 7, 185, 487, 625, 847, 979, 1204, 1481, 1535 |
| PleI | GAGTC | 2 cut(s) | 699, 1151 |
| PpsI | GAGTC | 2 cut(s) | 699, 1151 |
| PpuMI | RGGWCCY | 1 cut(s) | 554 |
| Psp5II | RGGWCCY | 1 cut(s) | 554 |
| Psp6I | CCWGG | 5 cut(s) | 591, 762, 1335, 1474, 1483 |
| PspEI | GGTNACC | 2 cut(s) | 67, 1001 |
| PspFI | CCCAGC | 1 cut(s) | 626 |
| PspGI | CCWGG | 5 cut(s) | 591, 762, 1335, 1474, 1483 |
| PspN4I | GGNNCC | 5 cut(s) | 387, 555, 658, 1174, 1437 |
| PspPI | GGNCC | 3 cut(s) | 20, 407, 554 |
| PspPPI | RGGWCCY | 1 cut(s) | 554 |
| PsuI | RGATCY | 2 cut(s) | 85, 1501 |
| PvuII | CAGCTG | 2 cut(s) | 371, 626 |
| RsaI | GTAC | 7 cut(s) | 367, 584, 742, 971, 1068, 1595, 1622 |
| RsaNI | GTAC | 7 cut(s) | 366, 583, 741, 970, 1067, 1594, 1621 |
| RseI | CAYNNNNRTG | 2 cut(s) | 666, 726 |
| SaqAI | TTAA | 7 cut(s) | 342, 456, 779, 806, 1133, 1410, 1514 |
| SatI | GCNGC | 9 cut(s) | 6, 184, 486, 624, 846, 978, 1203, 1480, 1534 |
| Sau3AI | GATC | 3 cut(s) | 85, 1105, 1501 |
| Sau96I | GGNCC | 3 cut(s) | 20, 407, 554 |
| ScaI | AGTACT | 1 cut(s) | 742 |
| SchI | GAGTC | 2 cut(s) | 700, 1151 |
| ScrFI | CCNGG | 5 cut(s) | 593, 764, 1337, 1476, 1485 |
| SduI | GDGCHC | 1 cut(s) | 550 |
| SfaNI | GCATC | 5 cut(s) | 228, 473, 502, 584, 1117 |
| SfuI | TTCGAA | 1 cut(s) | 14 |
| SinI | GGWCC | 1 cut(s) | 554 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 666, 726 |
| SmlI | CTYRAG | 3 cut(s) | 527, 1197, 1547 |
| SmoI | CTYRAG | 3 cut(s) | 527, 1197, 1547 |
| SsiI | CCGC | 6 cut(s) | 5, 183, 271, 416, 1300, 1613 |
| SspI | AATATT | 1 cut(s) | 1090 |
| SspMI | CTAG | 5 cut(s) | 489, 842, 887, 1007, 1098 |
| StyD4I | CCNGG | 5 cut(s) | 591, 762, 1335, 1474, 1483 |
| StyI | CCWWGG | 2 cut(s) | 102, 1070 |
| TaaI | ACNGT | 2 cut(s) | 587, 1314 |
| TaqI | TCGA | 5 cut(s) | 14, 397, 432, 541, 1249 |
| TatI | WGTACW | 1 cut(s) | 740 |
| TauI | GCSGC | 2 cut(s) | 8, 186 |
| Tru1I | TTAA | 7 cut(s) | 342, 456, 779, 806, 1133, 1410, 1514 |
| Tru9I | TTAA | 7 cut(s) | 342, 456, 779, 806, 1133, 1410, 1514 |
| TscAI | CASTG | 2 cut(s) | 733, 797 |
| TseFI | GTSAC | 3 cut(s) | 67, 1001, 1400 |
| TseI | GCWGC | 7 cut(s) | 485, 623, 845, 977, 1202, 1479, 1533 |
| Tsp45I | GTSAC | 3 cut(s) | 67, 1001, 1400 |
| TspDTI | ATGAA | 8 cut(s) | 217, 593, 710, 1377, 1428, 1475, 1618, 1622 |
| TspGWI | ACGGA | 2 cut(s) | 98, 429 |
| TspRI | CASTG | 2 cut(s) | 733, 797 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 653 |
| VpaK11BI | GGWCC | 1 cut(s) | 554 |
| XapI | RAATTY | 3 cut(s) | 10, 1058, 1389 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 61 |
| XmiI | GTMKAC | 1 cut(s) | 897 |
| XmnI | GAANNNNTTC | 6 cut(s) | 176, 635, 661, 1037, 1389, 1466 |
| XspI | CTAG | 5 cut(s) | 489, 842, 887, 1007, 1098 |
| ZrmI | AGTACT | 1 cut(s) | 742 |
| Zsp2I | ATGCAT | 3 cut(s) | 221, 466, 865 |