Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0005674

Physical Location & Seq

Genomic Coordinates Forward (+)

75752889 .. 75759302

Gene Structure 6414 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00137720.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1659 bp

ATGGCGTCCATATCCAACGGCCAGGTCCTCGCCGGCCCCACCAATCCAATGGTCACGCCTCTCCTCACCGATCTCTACCAGTTCACCATGGCCTATGCTTACTGGAAAGCCGGCAAGCACAACGAACGAGCCGTGTTTGATTTGTATTTCCGCAAGAATCCATTTGGCGGCGAATACACAGTGTTTGCTGGATTAGAGGAATGCATCAAATTCATTGCTAATTTCAAATTGGCCGACGACGAAATCGATTTCGTCCGCCAATCCTTGTCTTCTTCATGTGAGGAAGGATTCTATAAGTATCTGAGTGGAGTTGACTGTTCCGAAGTTGAAGTCTATGCTATCCAAGAAGGATCAGTCGTTTTTCCAAAGGTTCCTCTCGTTAGAGTTGAAGGACCAATCGCTGTGGTTCAGTTACTCGAAACTCCCTTCTTGAATCTCATTAATTATGCGTCATTAGTTGCTACAAATGCCGCAAGGCATCGTTTCGTTGCTGGAGAATCTAAAATGCTACTAGAGTTTGGGCTTCGACGAGCTCAGGGACCTGATGGTGGAATAGGGGCATCTAGGTACTGCTACATGGGAGGATTTCATGCAACAAGTAATGTTGCCGCTGGAAAGATATTTGGGATCCCGCTTCGTGGAACACATTCGCATGCTTTTGTCAGCTCATTCATGAGCCCAGATGAGATTATAGATAAATCACTTCATAGCAGTGATAAGCACAGTACTTGTGAGGATTTTGTTAGCCTGGTTCAGACTTGGTTGAGCAAAATTCAGTGGTCAAATTCATTAAATGGTACTTTTGGTGAGACCAATCACAGTGAGCTTGCAGCATTCACATCGTATGCCCTGGCATTCCCTGATAACTTTCTAGCTCTTGTAGACACATATGATGTTATGAGGAGTGGAATTCCCAACTTTTGTGCAGTTGCTTTAGCACTCAATGATCTAGGGTACAAAGCAGCTGGCATTAGGTTGGATTCAGGTGATCTAGCATATCTCTCCTCTGAGGCTCGGAAGATTTTTCGCATCATTGAGAAAGAATTTGGAGTACCTGGATTTGGAAAGACAGTTATCACAGCTAGTAATGATCTAAATGAGGAAACTTTGGATGCTTTAAACAAACAGGGCCATGAGGTTGATGCATTTGGAATTGGGACCCATGTAGTTACTTGTTATGCTCAAGCTGCTCTGGGTTGTGTTTTCAAGCTTGTTGAGATAAATAATCAGCCTCGCATCAAACTTTCTGAAGATGTCACAAAGGTCTCCATCCCTTGTAAAAAACGATCTTACAGATTGTTTGGGAAAGAAGGTTATCCCTTGGTAGACATAATGACCGGAGAAAATGAACCACCTCCAAAGGTTGGAGAACGGATCCTGTGTCGTCACCCCTTTAATGAATCGAAGAGAGCATATGTAGTGCCGCAGCGTGTTGAGGAACTTATGAAATGCTTTTGGCATGGCCCAGGTGGAGTGAGAGAAGATCTGCCACCATTAAAGGACATCAGGGAGCGCTGCATCAGCCAACTCGGGAAAATGCGTCCCGACCACATGAGGAGACTAAACCCCACTCCGTATAAGGTTAGTGTGAGTGCAAAACTGTATGAATTCATTCACTTCCTATGGCTCAATGAAGCACCTGTCGGGGAGTTGCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004516 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006950 GO:0006979 GO:0008150 GO:0016874 GO:0016879 GO:0044424 GO:0044444 GO:0044464 GO:0050896

KEGG Pathways

Metabolic & Signaling

ko00760 ko01100 map00760 map01100

Pfam Domains

Protein Families

NAPRTase

Protein Analysis

552

Amino Acids

61.36

Weight (kDa)

6.19

Isoelectric Point (pI)

32.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAPRTase_N	PF17767	21 - 148	1.8e-38	Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain
QRPTase_N	PF02749	107 - 151	2.9e-06	Quinolinate phosphoribosyl transferase, N-terminal domain
NAPRTase_C	PF17956	427 - 537	1.6e-31	Nicotinate phosphoribosyltransferase C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005674)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23420 AT2G23420 AT4G36940
fragaria_vesca	FvH4_1g16212 FvH4_1g16212 FvH4_1g16212
malus_domestica	MD02G1174500.v1.1 MD15G1285500.v1.1
prunus_persica	Prupe.7G131500_v2.0.a1 Prupe.7G131500_v2.0.a1
pyrus_communis	pycom02g14080 pycom15g24850
rosa_chinensis	RchiOBHm_Chr1g0342971 RchiOBHm_Chr2g0105921 RchiOBHm_Chr7g0236011
rosa_laevigata	RLG00000017470
rosa_multiflora	Rmu_sc0004367.1_g000012 Rmu_sc0008183.1_g000025 Rmu_sc0011173.1_g000015
rosa_roxburghii	Rroxscaffold_2G00137570 Rroxscaffold_2G00137720
rosa_rugosa	Rorug02G0132000
rosa_samantha	Rh2BG192500 Rh2DG189000 Rh7BG420500 Rh7CG469100
rosa_wichuraiana	Rw2G014320 Rw7G037310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1364
AccI	GTMKAC	2 cut(s)	882, 1326
AciI	CCGC	7 cut(s)	151, 168, 256, 471, 609, 632, 1424
AclWI	GGATC	5 cut(s)	358, 622, 635, 1369, 1382
AcoI	YGGCCR	2 cut(s)	19, 231
AcsI	RAATTY	6 cut(s)	209, 771, 784, 909, 1043, 1607
AcuI	CTGAAG	1 cut(s)	1269
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	5 cut(s)	569, 727, 799, 956, 1053
AfeI	AGCGCT	1 cut(s)	1514
AfiI	CCNNNNNNNGG	5 cut(s)	167, 548, 638, 1061, 1364
AgsI	TTSAA	5 cut(s)	226, 329, 389, 433, 1207
AjnI	CCWGG	5 cut(s)	21, 747, 849, 1054, 1465
AluBI	AGCT	8 cut(s)	533, 666, 826, 875, 965, 1082, 1187, 1210
AluI	AGCT	8 cut(s)	533, 666, 826, 875, 965, 1082, 1187, 1210
Alw21I	GWGCWC	1 cut(s)	535
Alw26I	GTCTC	3 cut(s)	803, 1270, 1552
AlwI	GGATC	5 cut(s)	358, 622, 635, 1369, 1382
Ama87I	CYCGRG	1 cut(s)	1529
Aor51HI	AGCGCT	1 cut(s)	1514
AoxI	GGCC	6 cut(s)	19, 34, 90, 231, 1129, 1462
ApeKI	GCWGC	5 cut(s)	830, 962, 1187, 1426, 1515
ApoI	RAATTY	6 cut(s)	209, 771, 784, 909, 1043, 1607
ArsI	GACNNNNNNTTYG	2 cut(s)	315, 347
AseI	ATTAAT	1 cut(s)	441
Asp700I	GAANNNNTTC	2 cut(s)	646, 1611
AspLEI	GCGC	1 cut(s)	1515
AspS9I	GGNCC	7 cut(s)	25, 35, 392, 539, 1129, 1158, 1463
AsuHPI	GGTGA	5 cut(s)	58, 76, 818, 998, 1379
AvaI	CYCGRG	1 cut(s)	1529
AvaII	GGWCC	4 cut(s)	25, 392, 539, 1158
BamHI	GGATCC	2 cut(s)	627, 1374
BanII	GRGCYC	2 cut(s)	535, 680
BbsI	GAAGAC	1 cut(s)	261
Bbv12I	GWGCWC	1 cut(s)	535
BbvI	GCAGC	5 cut(s)	842, 974, 1174, 1438, 1502
BccI	CCATC	2 cut(s)	539, 1277
BceAI	ACGGC	2 cut(s)	34, 116
BcgI	CGANNNNNNTGC	2 cut(s)	822, 856
BciT130I	CCWGG	5 cut(s)	23, 749, 851, 1056, 1467
BcoDI	GTCTC	3 cut(s)	803, 1270, 1552
BfaI	CTAG	6 cut(s)	512, 564, 872, 950, 992, 1083
BfoI	RGCGCY	1 cut(s)	1516
BglII	AGATCT	1 cut(s)	1483
BisI	GCNGC	9 cut(s)	169, 471, 609, 831, 963, 1188, 1424, 1427, 1516
BlsI	GCNGC	9 cut(s)	170, 472, 610, 832, 964, 1189, 1425, 1428, 1517
BmcAI	AGTACT	1 cut(s)	727
Bme1390I	CCNGG	5 cut(s)	23, 749, 851, 1056, 1467
Bme18I	GGWCC	4 cut(s)	25, 392, 539, 1158
BmeT110I	CYCGRG	1 cut(s)	1529
BmgT120I	GGNCC	7 cut(s)	25, 35, 392, 539, 1129, 1158, 1463
BmiI	GGNNCC	7 cut(s)	37, 372, 540, 629, 1159, 1160, 1376
BmrFI	CCNGG	5 cut(s)	23, 749, 851, 1056, 1467
BmsI	GCATC	8 cut(s)	213, 487, 569, 1038, 1102, 1132, 1245, 1527
BpiI	GAAGAC	1 cut(s)	261
BpmI	CTGGAG	1 cut(s)	513
Bpu10I	CCTNAGC	1 cut(s)	534
BpuEI	CTTGAG	1 cut(s)	1167
Bsa29I	ATCGAT	1 cut(s)	246
BsaHI	GRCGYC	1 cut(s)	5
BsaI	GGTCTC	2 cut(s)	803, 1270
BsaJI	CCNNGG	4 cut(s)	87, 849, 1320, 1465
BsaWI	WCCGGW	1 cut(s)	1337
BsaXI	ACNNNNNCTCC	1 cut(s)	1640
Bsc4I	CCNNNNNNNGG	5 cut(s)	167, 548, 638, 1061, 1364
Bse118I	RCCGGY	2 cut(s)	32, 110
Bse1I	ACTGG	2 cut(s)	79, 107
Bse3DI	GCAATG	1 cut(s)	213
BseBI	CCWGG	5 cut(s)	23, 749, 851, 1056, 1467
BseCI	ATCGAT	1 cut(s)	246
BseDI	CCNNGG	4 cut(s)	87, 849, 1320, 1465
BseGI	GGATG	2 cut(s)	1117, 1269
BseLI	CCNNNNNNNGG	5 cut(s)	167, 548, 638, 1061, 1364
BseMI	GCAATG	1 cut(s)	213
BseMII	CTCAG	3 cut(s)	293, 548, 999
BseNI	ACTGG	2 cut(s)	79, 107
BseRI	GAGGAG	4 cut(s)	53, 916, 994, 1570
BseXI	GCAGC	5 cut(s)	842, 974, 1174, 1438, 1502
BsgI	GTGCAG	1 cut(s)	945
BshFI	GGCC	6 cut(s)	21, 36, 92, 233, 1131, 1464
BshVI	ATCGAT	1 cut(s)	246
BsiHKAI	GWGCWC	1 cut(s)	535
BsiHKCI	CYCGRG	1 cut(s)	1529
BsiSI	CCGG	3 cut(s)	33, 111, 1338
BslFI	GGGAC	3 cut(s)	552, 1171, 1527
BslI	CCNNNNNNNGG	5 cut(s)	167, 548, 638, 1061, 1364
BsmAI	GTCTC	3 cut(s)	803, 1270, 1552
BsmFI	GGGAC	3 cut(s)	552, 1171, 1527
BsmI	GAATGC	3 cut(s)	206, 833, 854
BsnI	GGCC	6 cut(s)	21, 36, 92, 233, 1131, 1464
Bso31I	GGTCTC	2 cut(s)	803, 1270
BsoBI	CYCGRG	1 cut(s)	1529
Bsp1286I	GDGCHC	2 cut(s)	535, 680
Bsp143I	GATC	9 cut(s)	70, 350, 627, 946, 988, 1090, 1286, 1374, 1483
Bsp19I	CCATGG	1 cut(s)	87
BspACI	CCGC	7 cut(s)	151, 168, 256, 471, 609, 632, 1424
BspANI	GGCC	6 cut(s)	21, 36, 92, 233, 1131, 1464
BspCNI	CTCAG	3 cut(s)	294, 547, 1000
BspDI	ATCGAT	1 cut(s)	246
BspHI	TCATGA	1 cut(s)	672
BspLI	GGNNCC	7 cut(s)	37, 372, 540, 629, 1159, 1160, 1376
BspPI	GGATC	5 cut(s)	358, 622, 635, 1369, 1382
BspTNI	GGTCTC	2 cut(s)	803, 1270
BsrDI	GCAATG	1 cut(s)	213
BsrFI	RCCGGY	2 cut(s)	32, 110
BsrI	ACTGG	2 cut(s)	79, 107
BssAI	RCCGGY	2 cut(s)	32, 110
BssECI	CCNNGG	4 cut(s)	87, 849, 1320, 1465
BssMI	GATC	9 cut(s)	70, 350, 627, 946, 988, 1090, 1286, 1374, 1483
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	2 cut(s)	87, 1320
Bst2UI	CCWGG	5 cut(s)	23, 749, 851, 1056, 1467
Bst4CI	ACNGT	6 cut(s)	181, 317, 725, 821, 1072, 1602
Bst6I	CTCTTC	1 cut(s)	1400
BstACI	GRCGYC	1 cut(s)	5
BstC8I	GCNNGC	6 cut(s)	34, 112, 116, 654, 828, 967
BstDEI	CTNAG	3 cut(s)	302, 534, 1008
BstDSI	CCRYGG	1 cut(s)	87
BstF5I	GGATG	2 cut(s)	1117, 1269
BstH2I	RGCGCY	1 cut(s)	1516
BstHHI	GCGC	1 cut(s)	1515
BstKTI	GATC	9 cut(s)	73, 353, 630, 949, 991, 1093, 1289, 1377, 1486
BstMAI	GTCTC	3 cut(s)	803, 1270, 1552
BstMBI	GATC	9 cut(s)	70, 350, 627, 946, 988, 1090, 1286, 1374, 1483
BstMWI	GCNNNNNNNGC	3 cut(s)	467, 1187, 1521
BstNI	CCWGG	5 cut(s)	23, 749, 851, 1056, 1467
BstNSI	RCATGY	1 cut(s)	656
BstSCI	CCNGG	5 cut(s)	21, 747, 849, 1054, 1465
BstV1I	GCAGC	5 cut(s)	842, 974, 1174, 1438, 1502
BstV2I	GAAGAC	1 cut(s)	261
BstX2I	RGATCY	3 cut(s)	627, 1374, 1483
BstXI	CCANNNNNNTGG	1 cut(s)	49
BstYI	RGATCY	3 cut(s)	627, 1374, 1483
Bsu15I	ATCGAT	1 cut(s)	246
BsuRI	GGCC	6 cut(s)	21, 36, 92, 233, 1131, 1464
BsuTUI	ATCGAT	1 cut(s)	246
BtgI	CCRYGG	1 cut(s)	87
BtsCI	GGATG	2 cut(s)	1117, 1269
BtsI	GCAGTG	1 cut(s)	718
BtsIMutI	CAGTG	4 cut(s)	186, 718, 782, 826
Cac8I	GCNNGC	6 cut(s)	34, 112, 116, 654, 828, 967
CciI	TCATGA	1 cut(s)	672
CfoI	GCGC	1 cut(s)	1515
Cfr10I	RCCGGY	2 cut(s)	32, 110
Cfr13I	GGNCC	7 cut(s)	25, 35, 392, 539, 1129, 1158, 1463
ClaI	ATCGAT	1 cut(s)	246
CseI	GACGC	2 cut(s)	438, 1529
Csp6I	GTAC	5 cut(s)	568, 726, 798, 955, 1052
CspCI	CAANNNNNGTGG	2 cut(s)	384, 419
CviQI	GTAC	5 cut(s)	568, 726, 798, 955, 1052
DdeI	CTNAG	3 cut(s)	302, 534, 1008
DpnI	GATC	9 cut(s)	72, 352, 629, 948, 990, 1092, 1288, 1376, 1485
DpnII	GATC	9 cut(s)	70, 350, 627, 946, 988, 1090, 1286, 1374, 1483
DraI	TTTAAA	1 cut(s)	1119
EaeI	YGGCCR	2 cut(s)	19, 231
Eam1104I	CTCTTC	1 cut(s)	1400
EarI	CTCTTC	1 cut(s)	1400
EciI	GGCGGA	1 cut(s)	245
Ecl136II	GAGCTC	1 cut(s)	533
Eco130I	CCWWGG	2 cut(s)	87, 1320
Eco24I	GRGCYC	2 cut(s)	535, 680
Eco31I	GGTCTC	2 cut(s)	803, 1270
Eco47I	GGWCC	4 cut(s)	25, 392, 539, 1158
Eco47III	AGCGCT	1 cut(s)	1514
Eco53kI	GAGCTC	1 cut(s)	533
Eco57I	CTGAAG	1 cut(s)	1269
Eco88I	CYCGRG	1 cut(s)	1529
EcoICRI	GAGCTC	1 cut(s)	533
EcoO109I	RGGNCCY	3 cut(s)	25, 539, 1158
EcoRI	GAATTC	2 cut(s)	909, 1607
EcoRII	CCWGG	5 cut(s)	21, 747, 849, 1054, 1465
EcoT14I	CCWWGG	2 cut(s)	87, 1320
EcoT22I	ATGCAT	2 cut(s)	206, 1147
EcoT38I	GRGCYC	2 cut(s)	535, 680
ErhI	CCWWGG	2 cut(s)	87, 1320
FaqI	GGGAC	3 cut(s)	552, 1171, 1527
FauI	CCCGC	1 cut(s)	639
FauNDI	CATATG	2 cut(s)	889, 1414
FblI	GTMKAC	2 cut(s)	882, 1326
Fnu4HI	GCNGC	9 cut(s)	169, 471, 609, 831, 963, 1188, 1424, 1427, 1516
FokI	GGATG	2 cut(s)	1124, 1256
FriOI	GRGCYC	2 cut(s)	535, 680
Fsp4HI	GCNGC	9 cut(s)	169, 471, 609, 831, 963, 1188, 1424, 1427, 1516
FspBI	CTAG	6 cut(s)	512, 564, 872, 950, 992, 1083
GlaI	GCGC	1 cut(s)	1514
GluI	GCNGC	9 cut(s)	169, 471, 609, 831, 963, 1188, 1424, 1427, 1516
GsuI	CTGGAG	1 cut(s)	513
HaeII	RGCGCY	1 cut(s)	1516
HaeIII	GGCC	6 cut(s)	21, 36, 92, 233, 1131, 1464
HapII	CCGG	3 cut(s)	33, 111, 1338
HgaI	GACGC	2 cut(s)	438, 1529
HhaI	GCGC	1 cut(s)	1515
Hin1I	GRCGYC	1 cut(s)	5
Hin6I	GCGC	1 cut(s)	1513
HinP1I	GCGC	1 cut(s)	1513
HincII	GTYRAC	1 cut(s)	313
HindII	GTYRAC	1 cut(s)	313
HindIII	AAGCTT	1 cut(s)	1208
HinfI	GANTC	6 cut(s)	157, 288, 433, 497, 980, 1400
HpaII	CCGG	3 cut(s)	33, 111, 1338
HphI	GGTGA	5 cut(s)	58, 76, 818, 998, 1379
Hpy166II	GTNNAC	4 cut(s)	84, 313, 883, 1327
Hpy188I	TCNGA	6 cut(s)	303, 322, 756, 1009, 1017, 1249
Hpy188III	TCNNGA	4 cut(s)	430, 673, 1531, 1544
Hpy8I	GTNNAC	4 cut(s)	84, 313, 883, 1327
Hpy99I	CGWCG	3 cut(s)	239, 242, 531
HpyAV	CCTTC	5 cut(s)	278, 341, 383, 436, 1304
HpyCH4III	ACNGT	6 cut(s)	181, 317, 725, 821, 1072, 1602
HpyCH4V	TGCA	8 cut(s)	204, 593, 830, 926, 1145, 1518, 1595, 1654
HpyF10VI	GCNNNNNNNGC	3 cut(s)	467, 1187, 1521
HpyF3I	CTNAG	3 cut(s)	302, 534, 1008
Hsp92I	GRCGYC	1 cut(s)	5
HspAI	GCGC	1 cut(s)	1513
KflI	GGGWCCC	1 cut(s)	1158
KroI	GCCGGC	2 cut(s)	32, 110
KroNI	GCCGGC	2 cut(s)	34, 112
Kzo9I	GATC	9 cut(s)	70, 350, 627, 946, 988, 1090, 1286, 1374, 1483
LmnI	GCTCC	1 cut(s)	1510
Lsp1109I	GCAGC	5 cut(s)	842, 974, 1174, 1438, 1502
LweI	GCATC	8 cut(s)	213, 487, 569, 1038, 1102, 1132, 1245, 1527
MaeI	CTAG	6 cut(s)	512, 564, 872, 950, 992, 1083
MaeIII	GTNAC	5 cut(s)	52, 411, 1168, 1255, 1385
MalI	GATC	9 cut(s)	72, 352, 629, 948, 990, 1092, 1288, 1376, 1485
MboI	GATC	9 cut(s)	70, 350, 627, 946, 988, 1090, 1286, 1374, 1483
MboII	GAAGA	6 cut(s)	261, 264, 1030, 1262, 1417, 1493
MflI	RGATCY	3 cut(s)	627, 1374, 1483
MhlI	GDGCHC	2 cut(s)	535, 680
MmeI	TCCRAC	3 cut(s)	39, 957, 1345
Mph1103I	ATGCAT	2 cut(s)	206, 1147
MroNI	GCCGGC	2 cut(s)	32, 110
MroXI	GAANNNNTTC	2 cut(s)	646, 1611
MseI	TTAA	5 cut(s)	441, 791, 1118, 1395, 1496
MslI	CAYNNNNRTG	2 cut(s)	651, 711
MspA1I	CMGCKG	2 cut(s)	611, 965
MspI	CCGG	3 cut(s)	33, 111, 1338
MspR9I	CCNGG	5 cut(s)	23, 749, 851, 1056, 1467
Mva1269I	GAATGC	3 cut(s)	206, 833, 854
MvaI	CCWGG	5 cut(s)	23, 749, 851, 1056, 1467
MwoI	GCNNNNNNNGC	3 cut(s)	467, 1187, 1521
NaeI	GCCGGC	2 cut(s)	34, 112
NcoI	CCATGG	1 cut(s)	87
NdeI	CATATG	2 cut(s)	889, 1414
NdeII	GATC	9 cut(s)	70, 350, 627, 946, 988, 1090, 1286, 1374, 1483
NgoMIV	GCCGGC	2 cut(s)	32, 110
NlaIV	GGNNCC	7 cut(s)	37, 372, 540, 629, 1159, 1160, 1376
NmuCI	GTSAC	3 cut(s)	52, 1255, 1385
NsiI	ATGCAT	2 cut(s)	206, 1147
NspI	RCATGY	1 cut(s)	656
PaeI	GCATGC	1 cut(s)	656
PagI	TCATGA	1 cut(s)	672
PcsI	WCGNNNNNNNCGW	2 cut(s)	129, 243
PctI	GAATGC	3 cut(s)	206, 833, 854
PdiI	GCCGGC	2 cut(s)	34, 112
PdmI	GAANNNNTTC	2 cut(s)	646, 1611
PfeI	GAWTC	6 cut(s)	157, 288, 433, 497, 980, 1400
PflMI	CCANNNNNTGG	1 cut(s)	1364
PkrI	GCNGC	9 cut(s)	170, 472, 610, 832, 964, 1189, 1425, 1428, 1517
PpuMI	RGGWCCY	3 cut(s)	25, 539, 1158
PshBI	ATTAAT	1 cut(s)	441
Psp124BI	GAGCTC	1 cut(s)	535
Psp5II	RGGWCCY	3 cut(s)	25, 539, 1158
Psp6I	CCWGG	5 cut(s)	21, 747, 849, 1054, 1465
PspGI	CCWGG	5 cut(s)	21, 747, 849, 1054, 1465
PspN4I	GGNNCC	7 cut(s)	37, 372, 540, 629, 1159, 1160, 1376
PspPI	GGNCC	7 cut(s)	25, 35, 392, 539, 1129, 1158, 1463
PspPPI	RGGWCCY	3 cut(s)	25, 539, 1158
PsuI	RGATCY	3 cut(s)	627, 1374, 1483
PvuII	CAGCTG	1 cut(s)	965
RsaI	GTAC	5 cut(s)	569, 727, 799, 956, 1053
RsaNI	GTAC	5 cut(s)	568, 726, 798, 955, 1052
RseI	CAYNNNNRTG	2 cut(s)	651, 711
SacI	GAGCTC	1 cut(s)	535
SaqAI	TTAA	5 cut(s)	441, 791, 1118, 1395, 1496
SatI	GCNGC	9 cut(s)	169, 471, 609, 831, 963, 1188, 1424, 1427, 1516
Sau3AI	GATC	9 cut(s)	70, 350, 627, 946, 988, 1090, 1286, 1374, 1483
Sau96I	GGNCC	7 cut(s)	25, 35, 392, 539, 1129, 1158, 1463
ScaI	AGTACT	1 cut(s)	727
ScrFI	CCNGG	5 cut(s)	23, 749, 851, 1056, 1467
SduI	GDGCHC	2 cut(s)	535, 680
SfaNI	GCATC	8 cut(s)	213, 487, 569, 1038, 1102, 1132, 1245, 1527
SinI	GGWCC	4 cut(s)	25, 392, 539, 1158
SmiMI	CAYNNNNRTG	2 cut(s)	651, 711
SmlI	CTYRAG	1 cut(s)	1182
SmoI	CTYRAG	1 cut(s)	1182
SphI	GCATGC	1 cut(s)	656
SsiI	CCGC	7 cut(s)	151, 168, 256, 471, 609, 632, 1424
SspMI	CTAG	6 cut(s)	512, 564, 872, 950, 992, 1083
SstI	GAGCTC	1 cut(s)	535
StyD4I	CCNGG	5 cut(s)	21, 747, 849, 1054, 1465
StyI	CCWWGG	2 cut(s)	87, 1320
TaaI	ACNGT	6 cut(s)	181, 317, 725, 821, 1072, 1602
TaqI	TCGA	4 cut(s)	246, 417, 526, 1403
TatI	WGTACW	1 cut(s)	725
TauI	GCSGC	4 cut(s)	171, 473, 611, 1426
TfiI	GAWTC	6 cut(s)	157, 288, 433, 497, 980, 1400
Tru1I	TTAA	5 cut(s)	441, 791, 1118, 1395, 1496
Tru9I	TTAA	5 cut(s)	441, 791, 1118, 1395, 1496
TscAI	CASTG	4 cut(s)	186, 718, 782, 826
TseFI	GTSAC	3 cut(s)	52, 1255, 1385
TseI	GCWGC	5 cut(s)	830, 962, 1187, 1426, 1515
Tsp45I	GTSAC	3 cut(s)	52, 1255, 1385
TspGWI	ACGGA	2 cut(s)	1387, 1563
TspRI	CASTG	4 cut(s)	186, 718, 782, 826
Van91I	CCANNNNNTGG	1 cut(s)	1364
VpaK11BI	GGWCC	4 cut(s)	25, 392, 539, 1158
VspI	ATTAAT	1 cut(s)	441
XapI	RAATTY	6 cut(s)	209, 771, 784, 909, 1043, 1607
XceI	RCATGY	1 cut(s)	656
XcmI	CCANNNNNNNNNTGG	1 cut(s)	46
XmiI	GTMKAC	2 cut(s)	882, 1326
XmnI	GAANNNNTTC	2 cut(s)	646, 1611
XspI	CTAG	6 cut(s)	512, 564, 872, 950, 992, 1083
ZrmI	AGTACT	1 cut(s)	727
Zsp2I	ATGCAT	2 cut(s)	206, 1147

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.