Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0011222

Physical Location & Seq

Genomic Coordinates Reverse (-)

22208024 .. 22210355

Gene Structure 2332 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2202 bp

ATGGTGACTGGCTGGCGAAGGGCCTTCTGTACATCCATTCCCAAAGACAGAGACTCAAAAGTGCGTATTGAGAAGCAGCAATGCAACGACAACGGCAATCAGCAGAATCCCAGAACCAGCTCCAAATTTGGCTTCTTCTCCAACCCATCAACCCCACGCCTGCAATCTCAACCCCAAACTCAACCTGTAGTATCTAGCCCCGGCGGCCTCCGCTGCCGAACCACCGCCACCTCCACCGCCACAAACACCCCCACTTCCTCACTACCTAACAGCCCAAAACTCCAATGCGACGTCTCGTCCGCCGCCACAACCCCCCAAAAAACCACCAGTTACAGCCCGAGACTGCTTTTCCAGTTCCAGCGCTCCAACCCATCGTCCCCAAAATCTCCCTCCAGGTTCTCAATCCTCAGGTCCACCCTACGCCTCTCCAAAAGTAGATGCGGAATCTGCTTACAGACTGTGAAAAGTGGTCAGGGCACCGCCATTTTCACCGCGGAGTGCTCCCATTCCTTCCACTTCGCCTGCATCTCCGCCCACGCCAAGAAGAACAGCCTCCTCCTCTGCCCCGTCTGCAGCACTGCCTGGAAGGAACTGCCGTTAATCTCCGTCAACAAACCACAAACCCAGCAGCAGCCGCTGCCAATTTCATTGCCCAAGAAGCCCAGAGATGTTAAGACCAAACCTCCGAGAGTTTACAACGACGACGAGCCGCTTTCGTCCCCGACTTCCGGTTCCCAGTTCAACCCAATACCAGAAGAGAACGACGACGAAAACGACGCCGTTGAATTCCAGGGGTTCTTTGTCAATGCGAGTTCCAGGCCTCAATCACGTTTCCCTTCGGCTGACCGGAATGTGAAGAATGTGGAGGTCAGTCTGTTGCCGGAACTGGCGGTTGTGGCGGTCGGAAGGTGCTACGAAACGCACGCGGTGGTTCTGAAGCTCAAAGCACCGCAAACCAATGAGTCCAAGACGGCGTCGTTAGAGCTCCGCGCTCCGATTGACTTGGTGACGGTGGTGGACGTGAGCGCGAGCGCGAGCAATGCGAAGATTCAGATGATGAAGCGCGCGATGCGACTTGTAGTTTCGTCGCTGCGCGACACTGACCGTCTCTCAATCGTCGCATATTCCTCCACTTCGAAGAGGCTGTTGCCGCTCCGGCGAATGACCTCCGCCGGCCGACGTTCGGCTCGTCGGATTGTGGACGCGCTCTGCGCCGTCGGCCAGGGGATCTGTCTCAACGACGCGCTCAAGAAGGCCGCAAAGGTGATCCAAGATCGGCGCGAGAAAAACGCTGTTGCGAGTATCATGCTTCTATCGGATGCCGCTCAACCAAAAACCAATCAGAAGCGATCTTCTTCCCCGGTCGTGTCCTCCACGCGCTTCCCTCACCTCGACATCCCCGTCCACACAGTCGCATTCGGGGACGGTTGCGACGACGCGCTTGTAAAGTGCATTGGAGGCTTACTAAGCGTCGTGGTCCAGGATCTTAGTCTCCAACTCGGCGTCATTTCGGGTTCATTACCGGCCGAGATCGCCGCTGTCTACTCACTCACGGGTCGGCCCGCAGCTTTAGGATCCGGTTCGATCCGACTCGGCGACCTCTACGCTGGAGAGGAACGAGAGTTATTAGTCGAACTGAAAATGCCGTTTTCCGCCACGGCGGGGCCCCACGCATCCCAGAACGTGATATCCGTGAGGTCCACACACAGGGTCCCGTCGTCCAATGAGATTGTGTGTTCAAAAGAGCGGGTCCTTCTCCTACCTCGATCGCAGACCGTCCGATCGTCATCGTTGAACCCGAACATCGAGCGGCTGAAGAACCTCCACGTAGCGGCTAGAGCTGTGGCGGAGTCGCGGAGGTTCGTGGAGAGGAGCAGCGACTTTTCGGGCGCCTACCACCTGCTGTCGTCGGCGCGAACGTTGCTCCTGCATTCGAGCTCAGCTTCGGCGGAGGAGTTCCTGCGTGGTTTGGAGGGGGAGATGGCTGAGTTGCAGAGGCGGCGGCAGGTTCAGCTGCTGGCGGAGGTTGAGGCGAAGCAAAGCAAGAAGGGATTCAACAACGGACAGGTGGAGGAGAAGCAGGAGCCGCTAACGCCGACGTCGGCTTGGCGCGCCGCCGAGAAATTGGCTAAGGTGGCTACGCTGAGGAAGTCCATGAACAGAGTCAGCGACTTACACGGCTTCGAAAATGCCAGATTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000741 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006807 GO:0006996 GO:0006997 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009553 GO:0009559 GO:0009561 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009987 GO:0010197 GO:0016020 GO:0016043 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0022622 GO:0030054 GO:0030154 GO:0032446 GO:0032501 GO:0032502 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048229 GO:0048284 GO:0048364 GO:0048731 GO:0048856 GO:0048869 GO:0050896 GO:0055044 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0071840 GO:0071944 GO:0099402 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

VWA VWA_2 VWA_3 zf-RING_11

Protein Analysis

734

Amino Acids

79.95

Weight (kDa)

9.87

Isoelectric Point (pI)

55.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	146 - 191	6.7e-08	Ring finger domain
zf-RING_11	PF17123	147 - 176	1.2e-08	RING-like zinc finger
VWA	PF00092	334 - 481	7.2e-14	von Willebrand factor type A domain
VWA_3	PF13768	334 - 481	1.4e-11	von Willebrand factor type A domain
VWA_2	PF13519	335 - 441	3.1e-17	von Willebrand factor type A domain
WAV3_C	PF25243	600 - 671	3.4e-30	E3 ubiquitin-protein ligase WAV3-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011222)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22680 AT4G37890 AT4G37890
fragaria_vesca	FvH4_1g18891
malus_domestica	MD01G1045900.v1.1 MD15G1305700.v1.1
prunus_persica	Prupe.6G210600_v2.0.a1
pyrus_communis	pycom01g07210 pycom15g26960
rosa_chinensis	RchiOBHm_Chr2g0109851
rosa_laevigata	RLG00000017767
rosa_multiflora	Rmu_co8072298.1_g000001 Rmu_co8290675.1_g000001 Rmu_sc0008299.1_g000001
rosa_roxburghii	Rroxscaffold_2G00133910
rosa_samantha	Rh2AG215300 Rh2BG225400 Rh2CG217200 Rh2DG220800
rosa_wichuraiana	Rw2G016630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1908
AasI	GACNNNNNNGTC	1 cut(s)	1400
AatII	GACGTC	2 cut(s)	294, 2102
Acc36I	ACCTGC	2 cut(s)	1908, 1996
AccB1I	GGYRCC	2 cut(s)	476, 1889
AccBSI	CCGCTC	4 cut(s)	1153, 1325, 1747, 1810
AccI	GTMKAC	1 cut(s)	1542
AclI	AACGTT	1 cut(s)	1919
AclWI	GGATC	6 cut(s)	1235, 1261, 1491, 1569, 1579, 1582
AcoI	YGGCCR	3 cut(s)	1174, 1219, 1524
AcsI	RAATTY	2 cut(s)	125, 785
AcuI	CTGAAG	2 cut(s)	956, 1835
AcyI	GRCGYC	6 cut(s)	291, 777, 974, 1503, 1890, 2099
AdeI	CACNNNGTG	1 cut(s)	928
AfaI	GTAC	1 cut(s)	31
AfeI	AGCGCT	1 cut(s)	362
AfiI	CCNNNNNNNGG	5 cut(s)	728, 1183, 1662, 1707, 1831
AgsI	TTSAA	5 cut(s)	742, 785, 1740, 1795, 2056
AhdI	GACNNNNNGTC	1 cut(s)	295
AjiI	CACGTC	1 cut(s)	1021
AjnI	CCWGG	6 cut(s)	392, 581, 789, 815, 1221, 1479
AjuI	GAANNNNNNNTTGG	2 cut(s)	116, 148
AloI	GAACNNNNNNTCC	2 cut(s)	1673, 1705
AluBI	AGCT	8 cut(s)	120, 940, 985, 1568, 1841, 1938, 1943, 2014
AluI	AGCT	8 cut(s)	120, 940, 985, 1568, 1841, 1938, 1943, 2014
Alw21I	GWGCWC	3 cut(s)	503, 987, 1940
Alw26I	GTCTC	6 cut(s)	45, 298, 334, 1112, 1238, 1496
AlwI	GGATC	6 cut(s)	1235, 1261, 1491, 1569, 1579, 1582
AlwNI	CAGNNNCTG	2 cut(s)	637, 2017
Ama87I	CYCGRG	1 cut(s)	337
Aor51HI	AGCGCT	1 cut(s)	362
AoxI	GGCC	9 cut(s)	21, 205, 818, 1174, 1219, 1254, 1524, 1559, 1664
ApaI	GGGCCC	1 cut(s)	1668
ApoI	RAATTY	2 cut(s)	125, 785
AscI	GGCGCGCC	1 cut(s)	2110
Asp700I	GAANNNNTTC	1 cut(s)	2051
AspS9I	GGNCC	9 cut(s)	21, 411, 1477, 1560, 1664, 1665, 1698, 1711, 1750
AsuC2I	CCSGG	2 cut(s)	201, 1361
AsuHPI	GGTGA	5 cut(s)	16, 481, 1018, 1276, 1379
AsuII	TTCGAA	2 cut(s)	1136, 2184
AvaI	CYCGRG	1 cut(s)	337
AvaII	GGWCC	5 cut(s)	411, 1477, 1698, 1711, 1750
AxyI	CCTNAGG	1 cut(s)	407
BaeGI	GKGCMC	2 cut(s)	479, 1668
BamHI	GGATCC	1 cut(s)	1574
BanI	GGYRCC	2 cut(s)	476, 1889
BanII	GRGCYC	3 cut(s)	987, 1668, 1940
Bbv12I	GWGCWC	3 cut(s)	503, 987, 1940
BbvCI	CCTCAGC	1 cut(s)	2144
BccI	CCATC	3 cut(s)	154, 379, 1975
BceAI	ACGGC	8 cut(s)	109, 580, 764, 987, 1199, 1630, 1674, 2194
BcgI	CGANNNNNNTGC	2 cut(s)	1288, 1322
BciT130I	CCWGG	6 cut(s)	394, 583, 791, 817, 1223, 1481
BcnI	CCSGG	2 cut(s)	201, 1361
BcoDI	GTCTC	6 cut(s)	45, 298, 334, 1112, 1238, 1496
BfaI	CTAG	2 cut(s)	195, 1836
BfmI	CTRYAG	2 cut(s)	186, 571
BfoI	RGCGCY	2 cut(s)	364, 1893
BfuAI	ACCTGC	2 cut(s)	1908, 1996
BglI	GCCNNNNNGGC	2 cut(s)	204, 1156
BlpI	GCTNAGC	1 cut(s)	1939
Bme1390I	CCNGG	8 cut(s)	201, 394, 583, 791, 817, 1223, 1361, 1481
Bme18I	GGWCC	5 cut(s)	411, 1477, 1698, 1711, 1750
BmeRI	GACNNNNNGTC	1 cut(s)	295
BmeT110I	CYCGRG	1 cut(s)	337
BmgBI	CACGTC	1 cut(s)	1021
BmgT120I	GGNCC	9 cut(s)	21, 411, 1477, 1560, 1664, 1665, 1698, 1711, 1750
BmrFI	CCNGG	8 cut(s)	201, 394, 583, 791, 817, 1223, 1361, 1481
BmrI	ACTGGG	1 cut(s)	730
BmsI	GCATC	5 cut(s)	428, 534, 1059, 1309, 1682
BmuI	ACTGGG	1 cut(s)	730
BpmI	CTGGAG	2 cut(s)	376, 1629
Bpu10I	CCTNAGC	2 cut(s)	2130, 2144
Bpu1102I	GCTNAGC	1 cut(s)	1939
Bpu14I	TTCGAA	2 cut(s)	1136, 2184
BpuEI	CTTGAG	1 cut(s)	1232
BpuMI	CCSGG	2 cut(s)	201, 1361
BsaAI	YACGTR	1 cut(s)	1828
BsaBI	GATNNNNATC	1 cut(s)	1786
BsaHI	GRCGYC	6 cut(s)	291, 777, 974, 1503, 1890, 2099
BsaJI	CCNNGG	6 cut(s)	199, 492, 790, 1222, 1359, 1656
BsaWI	WCCGGW	3 cut(s)	728, 846, 1577
BsaXI	ACNNNNNCTCC	2 cut(s)	667, 697
Bsc4I	CCNNNNNNNGG	5 cut(s)	728, 1183, 1662, 1707, 1831
Bse118I	RCCGGY	2 cut(s)	1172, 1522
Bse1I	ACTGG	5 cut(s)	13, 327, 352, 736, 891
Bse21I	CCTNAGG	1 cut(s)	407
Bse3DI	GCAATG	3 cut(s)	86, 647, 1045
Bse8I	GATNNNNATC	1 cut(s)	1786
BseBI	CCWGG	6 cut(s)	394, 583, 791, 817, 1223, 1481
BseDI	CCNNGG	6 cut(s)	199, 492, 790, 1222, 1359, 1656
BseGI	GGATG	4 cut(s)	32, 1324, 1395, 1673
BseJI	GATNNNNATC	1 cut(s)	1786
BseLI	CCNNNNNNNGG	5 cut(s)	728, 1183, 1662, 1707, 1831
BseMI	GCAATG	3 cut(s)	86, 647, 1045
BseMII	CTCAG	4 cut(s)	421, 1953, 1977, 2135
BseNI	ACTGG	5 cut(s)	13, 327, 352, 736, 891
BsePI	GCGCGC	2 cut(s)	1063, 2110
BseRI	GAGGAG	5 cut(s)	545, 548, 1885, 1967, 2087
BseSI	GKGCMC	2 cut(s)	479, 1668
BseX3I	CGGCCG	2 cut(s)	1174, 1524
BseYI	CCCAGC	1 cut(s)	624
Bsh1285I	CGRYCG	6 cut(s)	903, 1177, 1365, 1527, 1769, 1784
BshFI	GGCC	9 cut(s)	23, 207, 820, 1176, 1221, 1256, 1526, 1561, 1666
BshNI	GGYRCC	2 cut(s)	476, 1889
BsiEI	CGRYCG	6 cut(s)	903, 1177, 1365, 1527, 1769, 1784
BsiHKAI	GWGCWC	3 cut(s)	503, 987, 1940
BsiHKCI	CYCGRG	1 cut(s)	337
BsiSI	CCGG	9 cut(s)	201, 729, 847, 881, 1156, 1173, 1361, 1523, 1578
BslFI	GGGAC	4 cut(s)	361, 703, 1436, 1697
BslI	CCNNNNNNNGG	5 cut(s)	728, 1183, 1662, 1707, 1831
BsmAI	GTCTC	6 cut(s)	45, 298, 334, 1112, 1238, 1496
BsmBI	CGTCTC	2 cut(s)	298, 1112
BsmFI	GGGAC	4 cut(s)	361, 703, 1436, 1697
BsmI	GAATGC	2 cut(s)	1415, 1930
BsnI	GGCC	9 cut(s)	23, 207, 820, 1176, 1221, 1256, 1526, 1561, 1666
BsoBI	CYCGRG	1 cut(s)	337
Bsp119I	TTCGAA	2 cut(s)	1136, 2184
Bsp120I	GGGCCC	1 cut(s)	1664
Bsp1286I	GDGCHC	5 cut(s)	479, 503, 987, 1668, 1940
Bsp1407I	TGTACA	1 cut(s)	29
Bsp1720I	GCTNAGC	1 cut(s)	1939
BspANI	GGCC	9 cut(s)	23, 207, 820, 1176, 1221, 1256, 1526, 1561, 1666
BspCNI	CTCAG	4 cut(s)	420, 1952, 1978, 2136
BspMAI	CTGCAG	1 cut(s)	575
BspMI	ACCTGC	2 cut(s)	1908, 1996
BspPI	GGATC	6 cut(s)	1235, 1261, 1491, 1569, 1579, 1582
BspT104I	TTCGAA	2 cut(s)	1136, 2184
BspT107I	GGYRCC	2 cut(s)	476, 1889
BsrBI	CCGCTC	4 cut(s)	1153, 1325, 1747, 1810
BsrDI	GCAATG	3 cut(s)	86, 647, 1045
BsrFI	RCCGGY	2 cut(s)	1172, 1522
BsrGI	TGTACA	1 cut(s)	29
BsrI	ACTGG	5 cut(s)	13, 327, 352, 736, 891
BssAI	RCCGGY	2 cut(s)	1172, 1522
BssECI	CCNNGG	6 cut(s)	199, 492, 790, 1222, 1359, 1656
BssHII	GCGCGC	2 cut(s)	1063, 2110
BssNI	GRCGYC	6 cut(s)	291, 777, 974, 1503, 1890, 2099
Bst2UI	CCWGG	6 cut(s)	394, 583, 791, 817, 1223, 1481
Bst4CI	ACNGT	6 cut(s)	460, 1012, 1106, 1411, 1427, 1777
Bst6I	CTCTTC	2 cut(s)	750, 1133
BstACI	GRCGYC	6 cut(s)	291, 777, 974, 1503, 1890, 2099
BstAPI	GCANNNNNTGC	1 cut(s)	637
BstAUI	TGTACA	1 cut(s)	29
BstBAI	YACGTR	1 cut(s)	1828
BstBI	TTCGAA	2 cut(s)	1136, 2184
BstDEI	CTNAG	7 cut(s)	407, 1466, 1487, 1939, 1986, 2130, 2144
BstDSI	CCRYGG	2 cut(s)	492, 1656
BstF5I	GGATG	4 cut(s)	32, 1324, 1395, 1673
BstH2I	RGCGCY	2 cut(s)	364, 1893
BstMAI	GTCTC	6 cut(s)	45, 298, 334, 1112, 1238, 1496
BstMCI	CGRYCG	6 cut(s)	903, 1177, 1365, 1527, 1769, 1784
BstNI	CCWGG	6 cut(s)	394, 583, 791, 817, 1223, 1481
BstSCI	CCNGG	8 cut(s)	199, 392, 581, 789, 815, 1221, 1359, 1479
BstSFI	CTRYAG	2 cut(s)	186, 571
BstSLI	GKGCMC	2 cut(s)	479, 1668
BstX2I	RGATCY	3 cut(s)	1227, 1483, 1574
BstYI	RGATCY	3 cut(s)	1227, 1483, 1574
BstZI	CGGCCG	2 cut(s)	1174, 1524
Bsu36I	CCTNAGG	1 cut(s)	407
BsuRI	GGCC	9 cut(s)	23, 207, 820, 1176, 1221, 1256, 1526, 1561, 1666
BtgI	CCRYGG	2 cut(s)	492, 1656
BtgZI	GCGATG	1 cut(s)	1082
BtrI	CACGTC	1 cut(s)	1021
BtsCI	GGATG	4 cut(s)	32, 1324, 1395, 1673
BtsI	GCAGTG	1 cut(s)	576
BtsIMutI	CAGTG	2 cut(s)	576, 1098
BveI	ACCTGC	2 cut(s)	1908, 1996
CaiI	CAGNNNCTG	2 cut(s)	637, 2017
Cfr10I	RCCGGY	2 cut(s)	1172, 1522
Cfr13I	GGNCC	9 cut(s)	21, 411, 1477, 1560, 1664, 1665, 1698, 1711, 1750
Cfr42I	CCGCGG	1 cut(s)	495
CseI	GACGC	7 cut(s)	785, 963, 1211, 1250, 1445, 1459, 1492
Csp6I	GTAC	1 cut(s)	30
CviAII	CATG	2 cut(s)	1306, 2155
CviQI	GTAC	1 cut(s)	30
DdeI	CTNAG	7 cut(s)	407, 1466, 1487, 1939, 1986, 2130, 2144
DinI	GGCGCC	1 cut(s)	1891
DraIII	CACNNNGTG	1 cut(s)	928
DrdI	GACNNNNNNGTC	1 cut(s)	1400
DriI	GACNNNNNGTC	1 cut(s)	295
DseDI	GACNNNNNNGTC	1 cut(s)	1400
EaeI	YGGCCR	3 cut(s)	1174, 1219, 1524
EagI	CGGCCG	2 cut(s)	1174, 1524
Eam1104I	CTCTTC	2 cut(s)	750, 1133
Eam1105I	GACNNNNNGTC	1 cut(s)	295
EarI	CTCTTC	2 cut(s)	750, 1133
EciI	GGCGGA	7 cut(s)	289, 520, 1159, 1642, 1862, 1964, 2036
Ecl136II	GAGCTC	2 cut(s)	985, 1938
EclXI	CGGCCG	2 cut(s)	1174, 1524
Eco147I	AGGCCT	1 cut(s)	820
Eco24I	GRGCYC	3 cut(s)	987, 1668, 1940
Eco32I	GATATC	1 cut(s)	1689
Eco47I	GGWCC	5 cut(s)	411, 1477, 1698, 1711, 1750
Eco47III	AGCGCT	1 cut(s)	362
Eco52I	CGGCCG	2 cut(s)	1174, 1524
Eco53kI	GAGCTC	2 cut(s)	985, 1938
Eco57I	CTGAAG	2 cut(s)	956, 1835
Eco81I	CCTNAGG	1 cut(s)	407
Eco88I	CYCGRG	1 cut(s)	337
EcoICRI	GAGCTC	2 cut(s)	985, 1938
EcoO109I	RGGNCCY	5 cut(s)	21, 1664, 1665, 1711, 1750
EcoRI	GAATTC	1 cut(s)	785
EcoRII	CCWGG	6 cut(s)	392, 581, 789, 815, 1221, 1479
EcoRV	GATATC	1 cut(s)	1689
EcoT38I	GRGCYC	3 cut(s)	987, 1668, 1940
EgeI	GGCGCC	1 cut(s)	1891
EheI	GGCGCC	1 cut(s)	1891
Esp3I	CGTCTC	2 cut(s)	298, 1112
FaeI	CATG	2 cut(s)	1309, 2158
FaiI	YATR	3 cut(s)	1123, 1307, 2156
FaqI	GGGAC	4 cut(s)	361, 703, 1436, 1697
FatI	CATG	2 cut(s)	1305, 2154
FauI	CCCGC	3 cut(s)	1570, 1654, 1740
FblI	GTMKAC	1 cut(s)	1542
FokI	GGATG	4 cut(s)	19, 1331, 1382, 1660
FriOI	GRGCYC	3 cut(s)	987, 1668, 1940
FspBI	CTAG	2 cut(s)	195, 1836
GsaI	CCCAGC	1 cut(s)	628
GsuI	CTGGAG	2 cut(s)	376, 1629
HaeII	RGCGCY	2 cut(s)	364, 1893
HaeIII	GGCC	9 cut(s)	23, 207, 820, 1176, 1221, 1256, 1526, 1561, 1666
HapII	CCGG	9 cut(s)	201, 729, 847, 881, 1156, 1173, 1361, 1523, 1578
HgaI	GACGC	7 cut(s)	785, 963, 1211, 1250, 1445, 1459, 1492
Hin1I	GRCGYC	6 cut(s)	291, 777, 974, 1503, 1890, 2099
Hin1II	CATG	2 cut(s)	1309, 2158
HincII	GTYRAC	1 cut(s)	610
HindII	GTYRAC	1 cut(s)	610
HinfI	GANTC	9 cut(s)	53, 106, 444, 962, 1048, 1590, 1850, 2052, 2163
HpaII	CCGG	9 cut(s)	201, 729, 847, 881, 1156, 1173, 1361, 1523, 1578
HphI	GGTGA	5 cut(s)	16, 481, 1018, 1276, 1379
Hpy166II	GTNNAC	8 cut(s)	414, 610, 694, 1018, 1201, 1405, 1543, 1701
Hpy188III	TCNNGA	1 cut(s)	1249
Hpy8I	GTNNAC	8 cut(s)	414, 610, 694, 1018, 1201, 1405, 1543, 1701
HpyAV	CCTTC	9 cut(s)	12, 34, 520, 580, 846, 900, 1246, 1763, 2041
HpyCH4III	ACNGT	6 cut(s)	460, 1012, 1106, 1411, 1427, 1777
HpyCH4IV	ACGT	8 cut(s)	291, 829, 1020, 1180, 1683, 1827, 1919, 2099
HpyCH4V	TGCA	7 cut(s)	84, 163, 525, 573, 1452, 1930, 1993
HpyF3I	CTNAG	7 cut(s)	407, 1466, 1487, 1939, 1986, 2130, 2144
HpySE526I	ACGT	8 cut(s)	291, 829, 1020, 1180, 1683, 1827, 1919, 2099
Hsp92I	GRCGYC	6 cut(s)	291, 777, 974, 1503, 1890, 2099
Hsp92II	CATG	2 cut(s)	1309, 2158
KasI	GGCGCC	1 cut(s)	1889
KflI	GGGWCCC	1 cut(s)	1711
KroI	GCCGGC	1 cut(s)	1172
KroNI	GCCGGC	1 cut(s)	1174
KspI	CCGCGG	1 cut(s)	495
LmnI	GCTCC	9 cut(s)	125, 368, 506, 990, 997, 1158, 1872, 1929, 2083
LweI	GCATC	5 cut(s)	428, 534, 1059, 1309, 1682
MaeI	CTAG	2 cut(s)	195, 1836
MaeII	ACGT	8 cut(s)	291, 829, 1020, 1180, 1683, 1827, 1919, 2099
MaeIII	GTNAC	3 cut(s)	4, 329, 1006
MbiI	CCGCTC	4 cut(s)	1153, 1325, 1747, 1810
MboII	GAAGA	9 cut(s)	127, 556, 767, 868, 1057, 1150, 1344, 1347, 1828
MflI	RGATCY	3 cut(s)	1227, 1483, 1574
MhlI	GDGCHC	5 cut(s)	479, 503, 987, 1668, 1940
MluCI	AATT	4 cut(s)	125, 642, 785, 2123
Mly113I	GGCGCC	1 cut(s)	1890
MlyI	GAGTC	5 cut(s)	47, 971, 1584, 1859, 2172
MmeI	TCCRAC	6 cut(s)	165, 390, 883, 1172, 1519, 1612
MroNI	GCCGGC	1 cut(s)	1172
MroXI	GAANNNNTTC	1 cut(s)	2051
MseI	TTAA	2 cut(s)	599, 672
MspA1I	CMGCKG	5 cut(s)	213, 494, 637, 1538, 2014
MspI	CCGG	9 cut(s)	201, 729, 847, 881, 1156, 1173, 1361, 1523, 1578
MspR9I	CCNGG	8 cut(s)	201, 394, 583, 791, 817, 1223, 1361, 1481
Mva1269I	GAATGC	2 cut(s)	1415, 1930
MvaI	CCWGG	6 cut(s)	394, 583, 791, 817, 1223, 1481
NaeI	GCCGGC	1 cut(s)	1174
NarI	GGCGCC	1 cut(s)	1890
NciI	CCSGG	2 cut(s)	201, 1361
NgoMIV	GCCGGC	1 cut(s)	1172
NlaIII	CATG	2 cut(s)	1309, 2158
NmeAIII	GCCGAG	4 cut(s)	1479, 1552, 1572, 2143
NmuCI	GTSAC	2 cut(s)	4, 1006
NspV	TTCGAA	2 cut(s)	1136, 2184
PalAI	GGCGCGCC	1 cut(s)	2110
PaqCI	CACCTGC	1 cut(s)	1908
PauI	GCGCGC	2 cut(s)	1063, 2110
PceI	AGGCCT	1 cut(s)	820
PcsI	WCGNNNNNNNCGW	7 cut(s)	771, 1186, 1398, 1431, 1689, 1796, 1916
PctI	GAATGC	2 cut(s)	1415, 1930
PdiI	GCCGGC	1 cut(s)	1174
PdmI	GAANNNNTTC	1 cut(s)	2051
PfeI	GAWTC	4 cut(s)	106, 444, 1048, 2052
PflFI	GACNNNGTC	1 cut(s)	973
PfoI	TCCNGGA	1 cut(s)	1479
Ple19I	CGATCG	2 cut(s)	1769, 1784
PleI	GAGTC	5 cut(s)	47, 970, 1584, 1858, 2171
PluTI	GGCGCC	1 cut(s)	1893
PpsI	GAGTC	5 cut(s)	47, 970, 1584, 1858, 2171
Ppu21I	YACGTR	1 cut(s)	1828
PpuMI	RGGWCCY	2 cut(s)	1711, 1750
Psp124BI	GAGCTC	2 cut(s)	987, 1940
Psp1406I	AACGTT	1 cut(s)	1919
Psp5II	RGGWCCY	2 cut(s)	1711, 1750
Psp6I	CCWGG	6 cut(s)	392, 581, 789, 815, 1221, 1479
PspFI	CCCAGC	1 cut(s)	624
PspGI	CCWGG	6 cut(s)	392, 581, 789, 815, 1221, 1479
PspOMI	GGGCCC	1 cut(s)	1664
PspPI	GGNCC	9 cut(s)	21, 411, 1477, 1560, 1664, 1665, 1698, 1711, 1750
PspPPI	RGGWCCY	2 cut(s)	1711, 1750
PstI	CTGCAG	1 cut(s)	575
PstNI	CAGNNNCTG	2 cut(s)	637, 2017
PsuI	RGATCY	3 cut(s)	1227, 1483, 1574
PsyI	GACNNNGTC	1 cut(s)	973
PteI	GCGCGC	2 cut(s)	1063, 2110
PvuI	CGATCG	2 cut(s)	1769, 1784
PvuII	CAGCTG	1 cut(s)	2014
RsaI	GTAC	1 cut(s)	31
RsaNI	GTAC	1 cut(s)	30
SacI	GAGCTC	2 cut(s)	987, 1940
SacII	CCGCGG	1 cut(s)	495
SaqAI	TTAA	2 cut(s)	599, 672
Sau96I	GGNCC	9 cut(s)	21, 411, 1477, 1560, 1664, 1665, 1698, 1711, 1750
SchI	GAGTC	5 cut(s)	47, 971, 1584, 1859, 2172
ScrFI	CCNGG	8 cut(s)	201, 394, 583, 791, 817, 1223, 1361, 1481
SduI	GDGCHC	5 cut(s)	479, 503, 987, 1668, 1940
SfaNI	GCATC	5 cut(s)	428, 534, 1059, 1309, 1682
SfcI	CTRYAG	2 cut(s)	186, 571
SfoI	GGCGCC	1 cut(s)	1891
Sfr303I	CCGCGG	1 cut(s)	495
SfuI	TTCGAA	2 cut(s)	1136, 2184
SgrBI	CCGCGG	1 cut(s)	495
SgsI	GGCGCGCC	1 cut(s)	2110
SinI	GGWCC	5 cut(s)	411, 1477, 1698, 1711, 1750
SmlI	CTYRAG	1 cut(s)	1247
SmoI	CTYRAG	1 cut(s)	1247
Sse9I	AATT	4 cut(s)	125, 642, 785, 2123
SseBI	AGGCCT	1 cut(s)	820
SspDI	GGCGCC	1 cut(s)	1889
SspMI	CTAG	2 cut(s)	195, 1836
SstI	GAGCTC	2 cut(s)	987, 1940
StuI	AGGCCT	1 cut(s)	820
StyD4I	CCNGG	8 cut(s)	199, 392, 581, 789, 815, 1221, 1359, 1479
TaaI	ACNGT	6 cut(s)	460, 1012, 1106, 1411, 1427, 1777
TaiI	ACGT	8 cut(s)	294, 832, 1023, 1183, 1686, 1830, 1922, 2102
TaqI	TCGA	8 cut(s)	1136, 1392, 1583, 1632, 1765, 1806, 1934, 2184
TasI	AATT	4 cut(s)	125, 642, 785, 2123
TatI	WGTACW	1 cut(s)	29
TfiI	GAWTC	4 cut(s)	106, 444, 1048, 2052
Tru1I	TTAA	2 cut(s)	599, 672
Tru9I	TTAA	2 cut(s)	599, 672
TscAI	CASTG	2 cut(s)	583, 1105
TseFI	GTSAC	2 cut(s)	4, 1006
Tsp45I	GTSAC	2 cut(s)	4, 1006
TspDTI	ATGAA	4 cut(s)	636, 1073, 1506, 2171
TspGWI	ACGGA	3 cut(s)	595, 1681, 2076
TspRI	CASTG	2 cut(s)	583, 1105
Tth111I	GACNNNGTC	1 cut(s)	973
VpaK11BI	GGWCC	5 cut(s)	411, 1477, 1698, 1711, 1750
XapI	RAATTY	2 cut(s)	125, 785
XmiI	GTMKAC	1 cut(s)	1542
XmnI	GAANNNNTTC	1 cut(s)	2051
XspI	CTAG	2 cut(s)	195, 1836
ZraI	GACGTC	2 cut(s)	292, 2100

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.