Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0011222

Physical Location & Seq

Genomic Coordinates Reverse (-)

20009149 .. 20012457

Gene Structure 3309 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G016630.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1659 bp

ATGCTCTTCTTCCATTTTGCTAAAATCCCAAATCAGAAACAGAGACAAGGAATCCAAAAAATGGTGACTGGGTGGAGAAGGGCCTTCTGCACGTCTATCCCTAAAGACAGACACACCAAAGTTGTAACAGAGAAGCAGCAGCAACAATGTGAGAACACCAACACCAACAATAGCCAAAGCCCCAAAATCACCTCCAAATTCGGTTTCTTCTCCTCCTCCTCAAACCCATCCACGCCTCGCCTTCAATTCCAGCCGGTGTCGACTCCAAGCCTCCGCTGCCGAACCACCACCGCCGCCGCCACAGCACCCACCACCCCCAATTCTTCCCTCCCCAACAGCCCAAAACTGCAATGCAACGTCCCTGCCACCCCGAAAAAAATGGCCGACAGCCCCAGAGTCTTCCACCGATCCAACCCCTCCTCCCCGAAATCGCCTTCCAGCTTCTCCCTCCTCAAATCCACCCTCCGCCTCAACAAAAGTAGATGCGGAATCTGCTTGCAGAGCGTGAAAAGTGGTCAAGGTACGGCCATTTTCACCGCCGAGTGCTCCCACTCCTTTCACTTTCCTTGCGTCGCCACCCATGTCAAGCAGCAGCCCCTCATGCTCTGCCCCGTCTGCCACGCCACCTGGAAGGAGCTGCCTCTGCTCGAAACTCTCACTCCTCGCACCAATACCAAGCCCGACTCCAAGCTCAGAGACGTCAAGATCAAGCCCTTGAGGGTCTACAACGACGACGAGCCCCTCATGTCGCCCACCTCCGGCGCCAGGTTCAATCCCATTCCGGAGTCCGACGAAAACGAGGACGAGAACGACGCCGTTGAGTTCCAGGGCTTCTTTGTCAATCCTGATACGAATAATGTCTGTTCCGGGAATCGCAGGAGTGTGGAGTTTAGTTTGCTGCCTGAATCGGCGGTGGTGGCGCTTGGGAGGAGCTTCGAGACTTACGCCGTCGTCTTGAAAGTCAAAGCTCCGCAGCTTGTGGAAGGCAGAGCGACGTCGTCGTCGCGACGGCCGCCGATTGACTTGGTGACCGTGGTCGACGTCAGCGCCAATACCAGCCGCGCCAGGATTCAGGCCACCAAACGCGCGTTGCGGTTGATCATTTCTTCTCTCTCCGACGCCGACAGGCTCTCCATCGTGGCCTTCTCGTCCACCTCCAAGAGGCTGCTGCCGTTACGGAGGATGACGTCGCCCGGCCGGAGATCGGCGCGTCGGATAGTCGACGCGCTCTGCGGCGTTGGCCAGGGGATGTGTGTCAACGACGCGCTCAAGAAGGCGGCCAAGGTGTTGCAAGACCGCCGGGAGAGGAACCCCGTCGCTAGCATTATGCTCCTCTCGGACGGCGGCGGCGGCGTTTCCGCCAATCAGAAGCGCTCCTCCCCGGTCGTGTCCTCCACGCGCTTCCCCCACCTCGACATCCCCGTCCACCGTCGGATTAACCGAGACTACCGACGACGCGTTCGCCAAGTGCGTCGGGGGTTTGCTAAGCGTGGTGGTGAAAGACGTGAAGCTCCAGCTCAGCGTCGTAACCGGTTCAGCCAACGCCGAGATCGCCGGCGGTTTATTCTCTCACGGGCCGGCCGACGGCTCTCGGTTCCGGTTCGATCCGGCTTGGCGACCTCTACGCCGGAGAAGAGCGAGAGCTGCTCGTCGAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000741 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006807 GO:0006996 GO:0006997 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009553 GO:0009559 GO:0009561 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009987 GO:0010197 GO:0016020 GO:0016043 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0022622 GO:0030054 GO:0030154 GO:0032446 GO:0032501 GO:0032502 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048229 GO:0048284 GO:0048364 GO:0048731 GO:0048856 GO:0048869 GO:0050896 GO:0055044 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0071840 GO:0071944 GO:0099402 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

VWA VWA_2 VWA_3 zf-RING_11

Protein Analysis

552

Amino Acids

61.35

Weight (kDa)

11.03

Isoelectric Point (pI)

68.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	161 - 206	3.3e-07	Ring finger domain
zf-RING_11	PF17123	162 - 191	1.1e-08	RING-like zinc finger
VWA	PF00092	341 - 448	5.2e-11	von Willebrand factor type A domain
VWA_3	PF13768	341 - 450	9.7e-10	von Willebrand factor type A domain
VWA_2	PF13519	342 - 448	7.2e-16	von Willebrand factor type A domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011222)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22680 AT4G37890 AT4G37890
fragaria_vesca	FvH4_1g18891
malus_domestica	MD01G1045900.v1.1 MD15G1305700.v1.1
prunus_persica	Prupe.6G210600_v2.0.a1
pyrus_communis	pycom01g07210 pycom15g26960
rosa_chinensis	RchiOBHm_Chr2g0109851
rosa_laevigata	RLG00000017767
rosa_multiflora	Rmu_co8072298.1_g000001 Rmu_co8290675.1_g000001 Rmu_sc0008299.1_g000001
rosa_roxburghii	Rroxscaffold_2G00133910
rosa_samantha	Rh2AG215300 Rh2BG225400 Rh2CG217200 Rh2DG220800
rosa_wichuraiana	Rw2G016630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1000, 1421
AatII	GACGTC	4 cut(s)	702, 998, 1044, 1190
AccB1I	GGYRCC	1 cut(s)	761
AccB7I	CCANNNNNTGG	1 cut(s)	61
AccI	GTMKAC	4 cut(s)	260, 723, 1038, 1221
AccII	CGCG	9 cut(s)	1006, 1062, 1086, 1088, 1210, 1226, 1265, 1399, 1458
AccIII	TCCGGA	1 cut(s)	781
AclWI	GGATC	2 cut(s)	402, 1599
AcoI	YGGCCR	7 cut(s)	381, 525, 1010, 1195, 1240, 1278, 1579
AcsI	RAATTY	1 cut(s)	197
AcyI	GRCGYC	7 cut(s)	699, 762, 813, 995, 1041, 1119, 1187
AfaI	GTAC	1 cut(s)	523
AfeI	AGCGCT	1 cut(s)	1373
AfiI	CCNNNNNNNGG	6 cut(s)	61, 758, 765, 1161, 1204, 1584
AflIII	ACRYGT	1 cut(s)	1456
AgeI	ACCGGT	1 cut(s)	1530
AgsI	TTSAA	3 cut(s)	245, 772, 958
AjiI	CACGTC	2 cut(s)	93, 1505
AjnI	CCWGG	5 cut(s)	626, 764, 825, 1064, 1242
AjuI	GAANNNNNNNTTGG	2 cut(s)	188, 220
AluBI	AGCT	9 cut(s)	441, 637, 691, 933, 968, 976, 1511, 1517, 1644
AluI	AGCT	9 cut(s)	441, 637, 691, 933, 968, 976, 1511, 1517, 1644
Alw21I	GWGCWC	1 cut(s)	548
Alw26I	GTCTC	4 cut(s)	37, 690, 932, 1437
AlwI	GGATC	2 cut(s)	402, 1599
Aor13HI	TCCGGA	1 cut(s)	781
Aor51HI	AGCGCT	1 cut(s)	1373
ApoI	RAATTY	1 cut(s)	197
ArsI	GACNNNNNNTTYG	2 cut(s)	1443, 1475
AsiGI	ACCGGT	1 cut(s)	1530
AspS9I	GGNCC	2 cut(s)	81, 1575
AsuC2I	CCSGG	4 cut(s)	868, 1194, 1301, 1382
AsuHPI	GGTGA	5 cut(s)	76, 181, 526, 1039, 1508
AsuNHI	GCTAGC	1 cut(s)	1319
BalI	TGGCCA	1 cut(s)	1242
BanI	GGYRCC	1 cut(s)	761
BanII	GRGCYC	1 cut(s)	741
BbsI	GAAGAC	1 cut(s)	391
Bbv12I	GWGCWC	1 cut(s)	548
BccI	CCATC	2 cut(s)	235, 1142
BceAI	ACGGC	7 cut(s)	540, 800, 932, 1025, 1156, 1357, 1601
BciT130I	CCWGG	5 cut(s)	628, 766, 827, 1066, 1244
BclI	TGATCA	1 cut(s)	1098
BcnI	CCSGG	4 cut(s)	868, 1194, 1301, 1382
BcoDI	GTCTC	4 cut(s)	37, 690, 932, 1437
BfaI	CTAG	1 cut(s)	1320
BfoI	RGCGCY	4 cut(s)	765, 923, 1050, 1375
BlpI	GCTNAGC	2 cut(s)	1485, 1518
Bme1390I	CCNGG	9 cut(s)	628, 766, 827, 868, 1066, 1194, 1244, 1301, 1382
BmgBI	CACGTC	2 cut(s)	93, 1505
BmgT120I	GGNCC	2 cut(s)	81, 1575
BmiI	GGNNCC	3 cut(s)	763, 1310, 1596
BmrFI	CCNGG	9 cut(s)	628, 766, 827, 868, 1066, 1194, 1244, 1301, 1382
BmrI	ACTGGG	1 cut(s)	78
BmsI	GCATC	1 cut(s)	473
BmtI	GCTAGC	1 cut(s)	1323
BmuI	ACTGGG	1 cut(s)	78
BoxI	GACNNNNGTC	1 cut(s)	1034
BpiI	GAAGAC	1 cut(s)	391
BplI	GAGNNNNNCTC	1 cut(s)	1631
BpmI	CTGGAG	1 cut(s)	1497
Bpu1102I	GCTNAGC	2 cut(s)	1485, 1518
BpuEI	CTTGAG	2 cut(s)	736, 1253
BpuMI	CCSGG	4 cut(s)	868, 1194, 1301, 1382
BsaHI	GRCGYC	7 cut(s)	699, 762, 813, 995, 1041, 1119, 1187
BsaJI	CCNNGG	5 cut(s)	826, 1032, 1243, 1281, 1380
BsaWI	WCCGGW	3 cut(s)	781, 1530, 1597
BsaXI	ACNNNNNCTCC	6 cut(s)	404, 434, 643, 673, 1115, 1145
Bsc4I	CCNNNNNNNGG	6 cut(s)	61, 758, 765, 1161, 1204, 1584
Bse118I	RCCGGY	4 cut(s)	253, 1530, 1554, 1577
Bse1I	ACTGG	1 cut(s)	73
Bse3DI	GCAATG	1 cut(s)	356
BseAI	TCCGGA	1 cut(s)	781
BseBI	CCWGG	5 cut(s)	628, 766, 827, 1066, 1244
BseDI	CCNNGG	5 cut(s)	826, 1032, 1243, 1281, 1380
BseGI	GGATG	4 cut(s)	227, 1188, 1254, 1416
BseLI	CCNNNNNNNGG	6 cut(s)	61, 758, 765, 1161, 1204, 1584
BseMI	GCAATG	1 cut(s)	356
BseMII	CTCAG	2 cut(s)	706, 1532
BseNI	ACTGG	1 cut(s)	73
BseRI	GAGGAG	9 cut(s)	202, 205, 208, 409, 440, 651, 943, 1322, 1366
BseX3I	CGGCCG	3 cut(s)	1010, 1195, 1579
BsgI	GTGCAG	1 cut(s)	73
Bsh1236I	CGCG	9 cut(s)	1006, 1062, 1086, 1088, 1210, 1226, 1265, 1399, 1458
Bsh1285I	CGRYCG	4 cut(s)	1013, 1198, 1386, 1582
BshNI	GGYRCC	1 cut(s)	761
BshTI	ACCGGT	1 cut(s)	1530
BsiEI	CGRYCG	4 cut(s)	1013, 1198, 1386, 1582
BsiHKAI	GWGCWC	1 cut(s)	548
BslFI	GGGAC	1 cut(s)	344
BslI	CCNNNNNNNGG	6 cut(s)	61, 758, 765, 1161, 1204, 1584
BsmAI	GTCTC	4 cut(s)	37, 690, 932, 1437
BsmBI	CGTCTC	1 cut(s)	690
BsmFI	GGGAC	1 cut(s)	344
Bsp1286I	GDGCHC	2 cut(s)	548, 741
Bsp13I	TCCGGA	1 cut(s)	781
Bsp143I	GATC	6 cut(s)	407, 705, 1098, 1202, 1549, 1604
Bsp1720I	GCTNAGC	2 cut(s)	1485, 1518
Bsp68I	TCGCGA	1 cut(s)	1006
BspCNI	CTCAG	2 cut(s)	705, 1531
BspEI	TCCGGA	1 cut(s)	781
BspFNI	CGCG	9 cut(s)	1006, 1062, 1086, 1088, 1210, 1226, 1265, 1399, 1458
BspLI	GGNNCC	3 cut(s)	763, 1310, 1596
BspOI	GCTAGC	1 cut(s)	1323
BspPI	GGATC	2 cut(s)	402, 1599
BspQI	GCTCTTC	2 cut(s)	11, 1628
BspT107I	GGYRCC	1 cut(s)	761
BsrDI	GCAATG	1 cut(s)	356
BsrFI	RCCGGY	4 cut(s)	253, 1530, 1554, 1577
BsrI	ACTGG	1 cut(s)	73
BssAI	RCCGGY	4 cut(s)	253, 1530, 1554, 1577
BssECI	CCNNGG	5 cut(s)	826, 1032, 1243, 1281, 1380
BssMI	GATC	6 cut(s)	407, 705, 1098, 1202, 1549, 1604
BssNI	GRCGYC	7 cut(s)	699, 762, 813, 995, 1041, 1119, 1187
BssT1I	CCWWGG	1 cut(s)	1281
Bst2UI	CCWGG	5 cut(s)	628, 766, 827, 1066, 1244
Bst4CI	ACNGT	2 cut(s)	1033, 1430
Bst6I	CTCTTC	2 cut(s)	11, 1628
BstACI	GRCGYC	7 cut(s)	699, 762, 813, 995, 1041, 1119, 1187
BstC8I	GCNNGC	4 cut(s)	497, 1321, 1556, 1579
BstDEI	CTNAG	3 cut(s)	692, 1485, 1518
BstDSI	CCRYGG	1 cut(s)	1032
BstEII	GGTNACC	1 cut(s)	1027
BstENI	CCTNNNNNAGG	1 cut(s)	1159
BstF5I	GGATG	4 cut(s)	227, 1188, 1254, 1416
BstFNI	CGCG	9 cut(s)	1006, 1062, 1086, 1088, 1210, 1226, 1265, 1399, 1458
BstH2I	RGCGCY	4 cut(s)	765, 923, 1050, 1375
BstKTI	GATC	6 cut(s)	410, 708, 1101, 1205, 1552, 1607
BstMAI	GTCTC	4 cut(s)	37, 690, 932, 1437
BstMBI	GATC	6 cut(s)	407, 705, 1098, 1202, 1549, 1604
BstMCI	CGRYCG	4 cut(s)	1013, 1198, 1386, 1582
BstNI	CCWGG	5 cut(s)	628, 766, 827, 1066, 1244
BstPAI	GACNNNNGTC	1 cut(s)	1034
BstPI	GGTNACC	1 cut(s)	1027
BstSCI	CCNGG	9 cut(s)	626, 764, 825, 866, 1064, 1192, 1242, 1299, 1380
BstUI	CGCG	9 cut(s)	1006, 1062, 1086, 1088, 1210, 1226, 1265, 1399, 1458
BstV2I	GAAGAC	1 cut(s)	391
BstZI	CGGCCG	3 cut(s)	1010, 1195, 1579
BtgI	CCRYGG	1 cut(s)	1032
BtrI	CACGTC	2 cut(s)	93, 1505
BtsCI	GGATG	4 cut(s)	227, 1188, 1254, 1416
BtuMI	TCGCGA	1 cut(s)	1006
Cac8I	GCNNGC	4 cut(s)	497, 1321, 1556, 1579
Cfr10I	RCCGGY	4 cut(s)	253, 1530, 1554, 1577
Cfr13I	GGNCC	2 cut(s)	81, 1575
CseI	GACGC	9 cut(s)	559, 821, 1127, 1199, 1232, 1271, 1460, 1464, 1511
Csp6I	GTAC	1 cut(s)	522
CspAI	ACCGGT	1 cut(s)	1530
CviAII	CATG	3 cut(s)	581, 601, 745
CviQI	GTAC	1 cut(s)	522
DdeI	CTNAG	3 cut(s)	692, 1485, 1518
DinI	GGCGCC	1 cut(s)	763
DpnI	GATC	6 cut(s)	409, 707, 1100, 1204, 1551, 1606
DpnII	GATC	6 cut(s)	407, 705, 1098, 1202, 1549, 1604
DrdI	GACNNNNNNGTC	2 cut(s)	1000, 1421
DseDI	GACNNNNNNGTC	2 cut(s)	1000, 1421
EaeI	YGGCCR	7 cut(s)	381, 525, 1010, 1195, 1240, 1278, 1579
EagI	CGGCCG	3 cut(s)	1010, 1195, 1579
Eam1104I	CTCTTC	2 cut(s)	11, 1628
EarI	CTCTTC	2 cut(s)	11, 1628
EciI	GGCGGA	2 cut(s)	455, 1348
EclXI	CGGCCG	3 cut(s)	1010, 1195, 1579
Eco130I	CCWWGG	1 cut(s)	1281
Eco24I	GRGCYC	1 cut(s)	741
Eco47III	AGCGCT	1 cut(s)	1373
Eco52I	CGGCCG	3 cut(s)	1010, 1195, 1579
Eco91I	GGTNACC	1 cut(s)	1027
EcoNI	CCTNNNNNAGG	1 cut(s)	1159
EcoO109I	RGGNCCY	1 cut(s)	81
EcoO65I	GGTNACC	1 cut(s)	1027
EcoRII	CCWGG	5 cut(s)	626, 764, 825, 1064, 1242
EcoT14I	CCWWGG	1 cut(s)	1281
EcoT38I	GRGCYC	1 cut(s)	741
EgeI	GGCGCC	1 cut(s)	763
EheI	GGCGCC	1 cut(s)	763
ErhI	CCWWGG	1 cut(s)	1281
Esp3I	CGTCTC	1 cut(s)	690
FaeI	CATG	3 cut(s)	584, 604, 748
FaiI	YATR	4 cut(s)	582, 602, 746, 1328
FaqI	GGGAC	1 cut(s)	344
FatI	CATG	3 cut(s)	580, 600, 744
FbaI	TGATCA	1 cut(s)	1098
FblI	GTMKAC	4 cut(s)	260, 723, 1038, 1221
FokI	GGATG	4 cut(s)	214, 1195, 1261, 1403
FriOI	GRGCYC	1 cut(s)	741
FseI	GGCCGGCC	1 cut(s)	1581
FspBI	CTAG	1 cut(s)	1320
GsuI	CTGGAG	1 cut(s)	1497
HaeII	RGCGCY	4 cut(s)	765, 923, 1050, 1375
HgaI	GACGC	9 cut(s)	559, 821, 1127, 1199, 1232, 1271, 1460, 1464, 1511
Hin1I	GRCGYC	7 cut(s)	699, 762, 813, 995, 1041, 1119, 1187
Hin1II	CATG	3 cut(s)	584, 604, 748
HincII	GTYRAC	4 cut(s)	261, 1039, 1222, 1258
HindII	GTYRAC	4 cut(s)	261, 1039, 1222, 1258
HinfI	GANTC	9 cut(s)	51, 262, 396, 489, 683, 785, 871, 905, 1069
HphI	GGTGA	5 cut(s)	76, 181, 526, 1039, 1508
Hpy166II	GTNNAC	7 cut(s)	261, 724, 1039, 1152, 1222, 1258, 1426
Hpy188I	TCNGA	8 cut(s)	36, 695, 790, 1117, 1215, 1339, 1368, 1434
Hpy188III	TCNNGA	7 cut(s)	703, 782, 845, 937, 955, 1005, 1270
Hpy8I	GTNNAC	7 cut(s)	261, 724, 1039, 1152, 1222, 1258, 1426
HpyAV	CCTTC	8 cut(s)	72, 94, 251, 444, 625, 977, 1153, 1267
HpyCH4III	ACNGT	2 cut(s)	1033, 1430
HpyCH4IV	ACGT	7 cut(s)	92, 357, 699, 995, 1041, 1187, 1504
HpyCH4V	TGCA	5 cut(s)	90, 349, 354, 499, 1291
HpyF3I	CTNAG	3 cut(s)	692, 1485, 1518
HpySE526I	ACGT	7 cut(s)	92, 357, 699, 995, 1041, 1187, 1504
Hsp92I	GRCGYC	7 cut(s)	699, 762, 813, 995, 1041, 1119, 1187
Hsp92II	CATG	3 cut(s)	584, 604, 748
KasI	GGCGCC	1 cut(s)	761
Kpn2I	TCCGGA	1 cut(s)	781
KroI	GCCGGC	2 cut(s)	1554, 1577
KroNI	GCCGGC	2 cut(s)	1556, 1579
Ksp22I	TGATCA	1 cut(s)	1098
Kzo9I	GATC	6 cut(s)	407, 705, 1098, 1202, 1549, 1604
LguI	GCTCTTC	2 cut(s)	11, 1628
LmnI	GCTCC	7 cut(s)	551, 634, 930, 973, 1335, 1379, 1516
LweI	GCATC	1 cut(s)	473
MaeI	CTAG	1 cut(s)	1320
MaeII	ACGT	7 cut(s)	92, 357, 699, 995, 1041, 1187, 1504
MaeIII	GTNAC	5 cut(s)	64, 124, 1027, 1173, 1526
MalI	GATC	6 cut(s)	409, 707, 1100, 1204, 1551, 1606
MboI	GATC	6 cut(s)	407, 705, 1098, 1202, 1549, 1604
MboII	GAAGA	5 cut(s)	199, 315, 391, 1098, 1645
MhlI	GDGCHC	2 cut(s)	548, 741
MlsI	TGGCCA	1 cut(s)	1242
MluCI	AATT	3 cut(s)	197, 245, 319
MluI	ACGCGT	1 cut(s)	1456
MluNI	TGGCCA	1 cut(s)	1242
Mly113I	GGCGCC	1 cut(s)	762
MlyI	GAGTC	4 cut(s)	256, 405, 677, 794
MmeI	TCCRAC	5 cut(s)	435, 813, 1140, 1193, 1412
Mox20I	TGGCCA	1 cut(s)	1242
MreI	CGCCGGCG	1 cut(s)	1554
MroI	TCCGGA	1 cut(s)	781
MroNI	GCCGGC	2 cut(s)	1554, 1577
MscI	TGGCCA	1 cut(s)	1242
MseI	TTAA	1 cut(s)	1437
Msp20I	TGGCCA	1 cut(s)	1242
MspA1I	CMGCKG	1 cut(s)	276
MspR9I	CCNGG	9 cut(s)	628, 766, 827, 868, 1066, 1194, 1244, 1301, 1382
MvaI	CCWGG	5 cut(s)	628, 766, 827, 1066, 1244
MvnI	CGCG	9 cut(s)	1006, 1062, 1086, 1088, 1210, 1226, 1265, 1399, 1458
NaeI	GCCGGC	2 cut(s)	1556, 1579
NarI	GGCGCC	1 cut(s)	762
NciI	CCSGG	4 cut(s)	868, 1194, 1301, 1382
NdeII	GATC	6 cut(s)	407, 705, 1098, 1202, 1549, 1604
NgoMIV	GCCGGC	2 cut(s)	1554, 1577
NheI	GCTAGC	1 cut(s)	1319
NlaIII	CATG	3 cut(s)	584, 604, 748
NlaIV	GGNNCC	3 cut(s)	763, 1310, 1596
NmeAIII	GCCGAG	2 cut(s)	565, 1571
NmuCI	GTSAC	2 cut(s)	64, 1027
NruI	TCGCGA	1 cut(s)	1006
PciSI	GCTCTTC	2 cut(s)	11, 1628
PcsI	WCGNNNNNNNCGW	4 cut(s)	1419, 1438, 1468, 1579
PdiI	GCCGGC	2 cut(s)	1556, 1579
PfeI	GAWTC	5 cut(s)	51, 489, 871, 905, 1069
PflFI	GACNNNGTC	1 cut(s)	997
PflMI	CCANNNNNTGG	1 cut(s)	61
PfoI	TCCNGGA	1 cut(s)	866
PinAI	ACCGGT	1 cut(s)	1530
PleI	GAGTC	4 cut(s)	256, 404, 677, 793
PluTI	GGCGCC	1 cut(s)	765
PpsI	GAGTC	4 cut(s)	256, 404, 677, 793
PshAI	GACNNNNGTC	1 cut(s)	1034
Psp6I	CCWGG	5 cut(s)	626, 764, 825, 1064, 1242
PspEI	GGTNACC	1 cut(s)	1027
PspGI	CCWGG	5 cut(s)	626, 764, 825, 1064, 1242
PspN4I	GGNNCC	3 cut(s)	763, 1310, 1596
PspPI	GGNCC	2 cut(s)	81, 1575
PsyI	GACNNNGTC	1 cut(s)	997
RigI	GGCCGGCC	1 cut(s)	1581
RruI	TCGCGA	1 cut(s)	1006
RsaI	GTAC	1 cut(s)	523
RsaNI	GTAC	1 cut(s)	522
SalI	GTCGAC	3 cut(s)	259, 1037, 1220
SapI	GCTCTTC	2 cut(s)	11, 1628
SaqAI	TTAA	1 cut(s)	1437
Sau3AI	GATC	6 cut(s)	407, 705, 1098, 1202, 1549, 1604
Sau96I	GGNCC	2 cut(s)	81, 1575
SchI	GAGTC	4 cut(s)	256, 405, 677, 794
ScrFI	CCNGG	9 cut(s)	628, 766, 827, 868, 1066, 1194, 1244, 1301, 1382
SduI	GDGCHC	2 cut(s)	548, 741
SfaNI	GCATC	1 cut(s)	473
SfoI	GGCGCC	1 cut(s)	763
SgrAI	CRCCGGYG	1 cut(s)	1554
SmlI	CTYRAG	2 cut(s)	715, 1268
SmoI	CTYRAG	2 cut(s)	715, 1268
Sse9I	AATT	3 cut(s)	197, 245, 319
SspDI	GGCGCC	1 cut(s)	761
SspMI	CTAG	1 cut(s)	1320
StyD4I	CCNGG	9 cut(s)	626, 764, 825, 866, 1064, 1192, 1242, 1299, 1380
StyI	CCWWGG	1 cut(s)	1281
TaaI	ACNGT	2 cut(s)	1033, 1430
TaiI	ACGT	7 cut(s)	95, 360, 702, 998, 1044, 1190, 1507
TaqI	TCGA	8 cut(s)	260, 648, 936, 1038, 1221, 1413, 1603, 1652
TasI	AATT	3 cut(s)	197, 245, 319
TauI	GCSGC	9 cut(s)	296, 299, 1015, 1062, 1236, 1280, 1347, 1350, 1353
TfiI	GAWTC	5 cut(s)	51, 489, 871, 905, 1069
Tru1I	TTAA	1 cut(s)	1437
Tru9I	TTAA	1 cut(s)	1437
TseFI	GTSAC	2 cut(s)	64, 1027
Tsp45I	GTSAC	2 cut(s)	64, 1027
TspGWI	ACGGA	1 cut(s)	1192
Tth111I	GACNNNGTC	1 cut(s)	997
Van91I	CCANNNNNTGG	1 cut(s)	61
XagI	CCTNNNNNAGG	1 cut(s)	1159
XapI	RAATTY	1 cut(s)	197
XmiI	GTMKAC	4 cut(s)	260, 723, 1038, 1221
XspI	CTAG	1 cut(s)	1320
ZraI	GACGTC	4 cut(s)	700, 996, 1042, 1188

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.