Rmu_co8290675.1_g000001

von Willebrand factor type A domain

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8290675.1
Physical Location & Seq
Forward (+)
1 .. 865
865 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8290675.1_g000001.1.cds

Sequence Viewer

Length: 865 bp
cggcggcggcggcgtttccgccaatcagaagcgctcctccccggtcgtgtcctccacgcgcttcccccacctcgacatccccgtccacaccgtcggattaaccgagactaccgacgacgcgttcgccaagtgcgtcgggggtttgctaagcgtggtggtgaaagacgtgaagctccagctcagcgtcgtaaccggttcagccaacgccgagatcgcggcggtttattctctcactggccggcccacggctctcggttccggttcgatccggctcggcgacctctacgccggagaagagcgagagctgctcgtcgagttgaaagtcccggtcaattccggcgggtcccacacccaaaacgcgatgatgtccgtacggtccacgtacagagacccgtcgtcgaatgagctcgtattttccaaagagcgggccctcctcgtaccgcgctcgcaagccgtccgatcgccttctacctcttcctccaaccccaacatccaacggctgcgtaatctccacgtcacggctcgagccgtggccgaatcgcgccggttcttggagcgaaacgacttctcaggcgcccatcacttgctgacttcggctcgagctctgctgctccagtcgagctcggcttcggcggaggagttcctgcgcggcttggaggctgagctggcggagctgcaccgtggaaggcagcaccagagtgtggcccagaggcagagagggaacgggcacttggaggagaagccggagccgctgacgccgacctcggcttggcgcgccgccgagagattggctaaggtggctataatgaggaagtccatgaacagagtcagcgacttacacggcttcgaaaacgccagattttag

Protein Analysis

287

Amino Acids

31.05

Weight (kDa)

9.98

Isoelectric Point (pI)

46.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 81
AccB1I GGYRCC 1 cut(s) 573
AccB7I CCANNNNNTGG 1 cut(s) 701
AccBSI CCGCTC 1 cut(s) 425
AccII CGCG 8 cut(s) 59, 120, 216, 360, 443, 542, 649, 775
AclWI GGATC 1 cut(s) 260
AcoI YGGCCR 2 cut(s) 236, 532
AcyI GRCGYC 2 cut(s) 574, 756
AfaI GTAC 3 cut(s) 373, 384, 439
AfeI AGCGCT 1 cut(s) 33
AfiI CCNNNNNNNGG 6 cut(s) 245, 424, 518, 551, 701, 769
AflIII ACRYGT 1 cut(s) 118
AgeI ACCGGT 1 cut(s) 192
AgsI TTSAA 1 cut(s) 320
AhdI GACNNNNNGTC 1 cut(s) 395
AjiI CACGTC 2 cut(s) 167, 515
AjuI GAANNNNNNNTTGG 2 cut(s) 714, 746
AleI CACNNNNGTG 1 cut(s) 697
AluBI AGCT 8 cut(s) 173, 179, 305, 407, 603, 622, 665, 674
AluI AGCT 8 cut(s) 173, 179, 305, 407, 603, 622, 665, 674
Alw21I GWGCWC 3 cut(s) 409, 605, 624
Alw26I GTCTC 2 cut(s) 99, 382
AlwI GGATC 1 cut(s) 260
Ama87I CYCGRG 2 cut(s) 523, 598
Aor51HI AGCGCT 1 cut(s) 33
AoxI GGCC 5 cut(s) 236, 240, 427, 532, 703
ApaI GGGCCC 1 cut(s) 431
ApeKI GCWGC 5 cut(s) 305, 500, 608, 674, 689
ArsI GACNNNNNNTTYG 2 cut(s) 105, 137
AscI GGCGCGCC 1 cut(s) 773
AsiGI ACCGGT 1 cut(s) 192
AspLEI GCGC 8 cut(s) 34, 61, 445, 544, 576, 649, 775, 777
AspS9I GGNCC 6 cut(s) 241, 343, 376, 427, 428, 704
AsuC2I CCSGG 2 cut(s) 42, 327
AsuHPI GGTGA 1 cut(s) 170
AsuII TTCGAA 1 cut(s) 847
AvaI CYCGRG 2 cut(s) 523, 598
AvaII GGWCC 2 cut(s) 343, 376
BaeGI GKGCMC 2 cut(s) 431, 730
BanI GGYRCC 1 cut(s) 573
BanII GRGCYC 4 cut(s) 409, 431, 605, 624
Bbv12I GWGCWC 3 cut(s) 409, 605, 624
BbvI GCAGC 5 cut(s) 292, 487, 595, 661, 701
BccI CCATC 1 cut(s) 586
BceAI ACGGC 6 cut(s) 262, 438, 513, 513, 535, 857
BcnI CCSGG 2 cut(s) 42, 327
BcoDI GTCTC 2 cut(s) 99, 382
BfoI RGCGCY 2 cut(s) 35, 577
BlpI GCTNAGC 3 cut(s) 147, 180, 661
Bme1390I CCNGG 2 cut(s) 42, 327
Bme18I GGWCC 2 cut(s) 343, 376
BmeRI GACNNNNNGTC 1 cut(s) 395
BmeT110I CYCGRG 2 cut(s) 523, 598
BmgBI CACGTC 2 cut(s) 167, 515
BmgT120I GGNCC 6 cut(s) 241, 343, 376, 427, 428, 704
BmiI GGNNCC 6 cut(s) 257, 344, 345, 429, 575, 748
BmrFI CCNGG 2 cut(s) 42, 327
BplI GAGNNNNNCTC 2 cut(s) 292, 324
BpmI CTGGAG 2 cut(s) 159, 597
Bpu10I CCTNAGC 1 cut(s) 793
Bpu1102I GCTNAGC 3 cut(s) 147, 180, 661
Bpu14I TTCGAA 1 cut(s) 847
BpuMI CCSGG 2 cut(s) 42, 327
BsaAI YACGTR 1 cut(s) 382
BsaHI GRCGYC 2 cut(s) 574, 756
BsaI GGTCTC 1 cut(s) 382
BsaJI CCNNGG 5 cut(s) 40, 244, 529, 680, 763
BsaWI WCCGGW 2 cut(s) 192, 258
Bsc4I CCNNNNNNNGG 6 cut(s) 245, 424, 518, 551, 701, 769
Bse118I RCCGGY 3 cut(s) 192, 238, 544
Bse1I ACTGG 2 cut(s) 239, 614
BseDI CCNNGG 5 cut(s) 40, 244, 529, 680, 763
BseGI GGATG 2 cut(s) 76, 490
BseLI CCNNNNNNNGG 6 cut(s) 245, 424, 518, 551, 701, 769
BseMII CTCAG 3 cut(s) 194, 583, 652
BseNI ACTGG 2 cut(s) 239, 614
BsePI GCGCGC 1 cut(s) 773
BseRI GAGGAG 4 cut(s) 26, 423, 651, 750
BseSI GKGCMC 2 cut(s) 431, 730
BseXI GCAGC 5 cut(s) 292, 487, 595, 661, 701
BsgI GTGCAG 1 cut(s) 660
Bsh1236I CGCG 8 cut(s) 59, 120, 216, 360, 443, 542, 649, 775
Bsh1285I CGRYCG 2 cut(s) 46, 462
BshFI GGCC 5 cut(s) 238, 242, 429, 534, 705
BshNI GGYRCC 1 cut(s) 573
BshTI ACCGGT 1 cut(s) 192
BsiEI CGRYCG 2 cut(s) 46, 462
BsiHKAI GWGCWC 3 cut(s) 409, 605, 624
BsiHKCI CYCGRG 2 cut(s) 523, 598
BsiWI CGTACG 1 cut(s) 371
BslFI GGGAC 2 cut(s) 309, 329
BslI CCNNNNNNNGG 6 cut(s) 245, 424, 518, 551, 701, 769
BsmAI GTCTC 2 cut(s) 99, 382
BsmFI GGGAC 2 cut(s) 309, 329
BsnI GGCC 5 cut(s) 238, 242, 429, 534, 705
Bso31I GGTCTC 1 cut(s) 382
BsoBI CYCGRG 2 cut(s) 523, 598
Bsp119I TTCGAA 1 cut(s) 847
Bsp120I GGGCCC 1 cut(s) 427
Bsp1286I GDGCHC 5 cut(s) 409, 431, 605, 624, 730
Bsp143I GATC 3 cut(s) 211, 265, 459
Bsp1720I GCTNAGC 3 cut(s) 147, 180, 661
BspANI GGCC 5 cut(s) 238, 242, 429, 534, 705
BspCNI CTCAG 3 cut(s) 193, 582, 653
BspFNI CGCG 8 cut(s) 59, 120, 216, 360, 443, 542, 649, 775
BspLI GGNNCC 6 cut(s) 257, 344, 345, 429, 575, 748
BspPI GGATC 1 cut(s) 260
BspQI GCTCTTC 1 cut(s) 289
BspT104I TTCGAA 1 cut(s) 847
BspT107I GGYRCC 1 cut(s) 573
BspTNI GGTCTC 1 cut(s) 382
BsrBI CCGCTC 1 cut(s) 425
BsrFI RCCGGY 3 cut(s) 192, 238, 544
BsrI ACTGG 2 cut(s) 239, 614
BssAI RCCGGY 3 cut(s) 192, 238, 544
BssECI CCNNGG 5 cut(s) 40, 244, 529, 680, 763
BssHII GCGCGC 1 cut(s) 773
BssMI GATC 3 cut(s) 211, 265, 459
BssNI GRCGYC 2 cut(s) 574, 756
Bst4CI ACNGT 3 cut(s) 92, 376, 681
Bst6I CTCTTC 2 cut(s) 289, 479
BstACI GRCGYC 2 cut(s) 574, 756
BstBAI YACGTR 1 cut(s) 382
BstBI TTCGAA 1 cut(s) 847
BstC8I GCNNGC 6 cut(s) 240, 427, 447, 451, 667, 775
BstDEI CTNAG 5 cut(s) 147, 180, 569, 661, 793
BstDSI CCRYGG 3 cut(s) 244, 529, 680
BstF5I GGATG 2 cut(s) 76, 490
BstFNI CGCG 8 cut(s) 59, 120, 216, 360, 443, 542, 649, 775
BstH2I RGCGCY 2 cut(s) 35, 577
BstHHI GCGC 8 cut(s) 34, 61, 445, 544, 576, 649, 775, 777
BstKTI GATC 3 cut(s) 214, 268, 462
BstMAI GTCTC 2 cut(s) 99, 382
BstMBI GATC 3 cut(s) 211, 265, 459
BstMCI CGRYCG 2 cut(s) 46, 462
BstMWI GCNNNNNNNGC 9 cut(s) 10, 213, 305, 666, 671, 749, 755, 774, 798
BstSCI CCNGG 2 cut(s) 40, 325
BstSLI GKGCMC 2 cut(s) 431, 730
BstUI CGCG 8 cut(s) 59, 120, 216, 360, 443, 542, 649, 775
BstV1I GCAGC 5 cut(s) 292, 487, 595, 661, 701
BsuRI GGCC 5 cut(s) 238, 242, 429, 534, 705
BtgI CCRYGG 3 cut(s) 244, 529, 680
BtgZI GCGATG 1 cut(s) 375
BtrI CACGTC 2 cut(s) 167, 515
BtsCI GGATG 2 cut(s) 76, 490
BtsIMutI CAGTG 1 cut(s) 232
Cac8I GCNNGC 6 cut(s) 240, 427, 447, 451, 667, 775
CfoI GCGC 8 cut(s) 34, 61, 445, 544, 576, 649, 775, 777
Cfr10I RCCGGY 3 cut(s) 192, 238, 544
Cfr13I GGNCC 6 cut(s) 241, 343, 376, 427, 428, 704
CseI GACGC 4 cut(s) 122, 126, 173, 764
Csp6I GTAC 3 cut(s) 372, 383, 438
CspAI ACCGGT 1 cut(s) 192
CviAII CATG 1 cut(s) 818
CviQI GTAC 3 cut(s) 372, 383, 438
DdeI CTNAG 5 cut(s) 147, 180, 569, 661, 793
DinI GGCGCC 1 cut(s) 575
DpnI GATC 3 cut(s) 213, 267, 461
DpnII GATC 3 cut(s) 211, 265, 459
DrdI GACNNNNNNGTC 1 cut(s) 81
DriI GACNNNNNGTC 1 cut(s) 395
DseDI GACNNNNNNGTC 1 cut(s) 81
EaeI YGGCCR 2 cut(s) 236, 532
Eam1104I CTCTTC 2 cut(s) 289, 479
Eam1105I GACNNNNNGTC 1 cut(s) 395
EarI CTCTTC 2 cut(s) 289, 479
EciI GGCGGA 3 cut(s) 8, 648, 684
Ecl136II GAGCTC 3 cut(s) 407, 603, 622
Eco24I GRGCYC 4 cut(s) 409, 431, 605, 624
Eco31I GGTCTC 1 cut(s) 382
Eco47I GGWCC 2 cut(s) 343, 376
Eco47III AGCGCT 1 cut(s) 33
Eco53kI GAGCTC 3 cut(s) 407, 603, 622
Eco88I CYCGRG 2 cut(s) 523, 598
EcoICRI GAGCTC 3 cut(s) 407, 603, 622
EcoO109I RGGNCCY 2 cut(s) 343, 428
EcoT38I GRGCYC 4 cut(s) 409, 431, 605, 624
EgeI GGCGCC 1 cut(s) 575
EheI GGCGCC 1 cut(s) 575
FaeI CATG 1 cut(s) 821
FaiI YATR 2 cut(s) 804, 819
FaqI GGGAC 2 cut(s) 309, 329
FatI CATG 1 cut(s) 817
FauI CCCGC 2 cut(s) 333, 418
FokI GGATG 2 cut(s) 63, 477
FriOI GRGCYC 4 cut(s) 409, 431, 605, 624
FseI GGCCGGCC 1 cut(s) 242
GlaI GCGC 8 cut(s) 33, 60, 444, 543, 575, 648, 774, 776
GsuI CTGGAG 2 cut(s) 159, 597
HaeII RGCGCY 2 cut(s) 35, 577
HaeIII GGCC 5 cut(s) 238, 242, 429, 534, 705
HgaI GACGC 4 cut(s) 122, 126, 173, 764
HhaI GCGC 8 cut(s) 34, 61, 445, 544, 576, 649, 775, 777
Hin1I GRCGYC 2 cut(s) 574, 756
Hin1II CATG 1 cut(s) 821
Hin6I GCGC 8 cut(s) 32, 59, 443, 542, 574, 647, 773, 775
HinP1I GCGC 8 cut(s) 32, 59, 443, 542, 574, 647, 773, 775
HinfI GANTC 2 cut(s) 537, 826
HphI GGTGA 1 cut(s) 170
Hpy166II GTNNAC 2 cut(s) 86, 379
Hpy188I TCNGA 3 cut(s) 28, 96, 459
Hpy8I GTNNAC 2 cut(s) 86, 379
Hpy99I CGWCG 8 cut(s) 96, 117, 120, 138, 189, 315, 398, 401
HpyAV CCTTC 2 cut(s) 475, 679
HpyCH4III ACNGT 3 cut(s) 92, 376, 681
HpyCH4IV ACGT 3 cut(s) 166, 381, 514
HpyCH4V TGCA 1 cut(s) 677
HpyF10VI GCNNNNNNNGC 9 cut(s) 10, 213, 305, 666, 671, 749, 755, 774, 798
HpyF3I CTNAG 5 cut(s) 147, 180, 569, 661, 793
HpySE526I ACGT 3 cut(s) 166, 381, 514
Hsp92I GRCGYC 2 cut(s) 574, 756
Hsp92II CATG 1 cut(s) 821
HspAI GCGC 8 cut(s) 32, 59, 443, 542, 574, 647, 773, 775
KasI GGCGCC 1 cut(s) 573
KflI GGGWCCC 1 cut(s) 343
KroI GCCGGC 1 cut(s) 238
KroNI GCCGGC 1 cut(s) 240
Kzo9I GATC 3 cut(s) 211, 265, 459
LguI GCTCTTC 1 cut(s) 289
LmnI GCTCC 6 cut(s) 39, 178, 554, 616, 671, 746
Lsp1109I GCAGC 5 cut(s) 292, 487, 595, 661, 701
MaeII ACGT 3 cut(s) 166, 381, 514
MaeIII GTNAC 2 cut(s) 188, 515
MalI GATC 3 cut(s) 213, 267, 461
MbiI CCGCTC 1 cut(s) 425
MboI GATC 3 cut(s) 211, 265, 459
MboII GAAGA 2 cut(s) 306, 466
MhlI GDGCHC 5 cut(s) 409, 431, 605, 624, 730
MluCI AATT 1 cut(s) 332
MluI ACGCGT 1 cut(s) 118
Mly113I GGCGCC 1 cut(s) 574
MlyI GAGTC 1 cut(s) 835
MmeI TCCRAC 3 cut(s) 74, 505, 518
MroNI GCCGGC 1 cut(s) 238
MseI TTAA 1 cut(s) 99
MslI CAYNNNNRTG 1 cut(s) 697
MspA1I CMGCKG 1 cut(s) 752
MspR9I CCNGG 2 cut(s) 42, 327
MvnI CGCG 8 cut(s) 59, 120, 216, 360, 443, 542, 649, 775
MwoI GCNNNNNNNGC 9 cut(s) 10, 213, 305, 666, 671, 749, 755, 774, 798
NaeI GCCGGC 1 cut(s) 240
NarI GGCGCC 1 cut(s) 574
NciI CCSGG 2 cut(s) 42, 327
NdeII GATC 3 cut(s) 211, 265, 459
NgoMIV GCCGGC 1 cut(s) 238
NlaIII CATG 1 cut(s) 821
NlaIV GGNNCC 6 cut(s) 257, 344, 345, 429, 575, 748
NmeAIII GCCGAG 5 cut(s) 233, 253, 603, 744, 806
NmuCI GTSAC 1 cut(s) 515
NspV TTCGAA 1 cut(s) 847
OliI CACNNNNGTG 1 cut(s) 697
PaeR7I CTCGAG 2 cut(s) 523, 598
PalAI GGCGCGCC 1 cut(s) 773
PauI GCGCGC 1 cut(s) 773
PciSI GCTCTTC 1 cut(s) 289
PcsI WCGNNNNNNNCGW 3 cut(s) 79, 100, 130
PdiI GCCGGC 1 cut(s) 240
PfeI GAWTC 1 cut(s) 537
Pfl23II CGTACG 1 cut(s) 371
PflMI CCANNNNNTGG 1 cut(s) 701
PinAI ACCGGT 1 cut(s) 192
Ple19I CGATCG 1 cut(s) 462
PleI GAGTC 1 cut(s) 834
PluTI GGCGCC 1 cut(s) 577
PpsI GAGTC 1 cut(s) 834
Ppu21I YACGTR 1 cut(s) 382
PpuMI RGGWCCY 1 cut(s) 343
Psp124BI GAGCTC 3 cut(s) 409, 605, 624
Psp5II RGGWCCY 1 cut(s) 343
PspLI CGTACG 1 cut(s) 371
PspN4I GGNNCC 6 cut(s) 257, 344, 345, 429, 575, 748
PspOMI GGGCCC 1 cut(s) 427
PspPI GGNCC 6 cut(s) 241, 343, 376, 427, 428, 704
PspPPI RGGWCCY 1 cut(s) 343
PspXI VCTCGAGB 2 cut(s) 523, 598
PteI GCGCGC 1 cut(s) 773
PvuI CGATCG 1 cut(s) 462
RigI GGCCGGCC 1 cut(s) 242
RsaI GTAC 3 cut(s) 373, 384, 439
RsaNI GTAC 3 cut(s) 372, 383, 438
RseI CAYNNNNRTG 1 cut(s) 697
SacI GAGCTC 3 cut(s) 409, 605, 624
SapI GCTCTTC 1 cut(s) 289
SaqAI TTAA 1 cut(s) 99
Sau3AI GATC 3 cut(s) 211, 265, 459
Sau96I GGNCC 6 cut(s) 241, 343, 376, 427, 428, 704
SchI GAGTC 1 cut(s) 835
ScrFI CCNGG 2 cut(s) 42, 327
SduI GDGCHC 5 cut(s) 409, 431, 605, 624, 730
SfoI GGCGCC 1 cut(s) 575
Sfr274I CTCGAG 2 cut(s) 523, 598
SfuI TTCGAA 1 cut(s) 847
SgsI GGCGCGCC 1 cut(s) 773
SinI GGWCC 2 cut(s) 343, 376
SlaI CTCGAG 2 cut(s) 523, 598
SmiMI CAYNNNNRTG 1 cut(s) 697
SmlI CTYRAG 2 cut(s) 523, 598
SmoI CTYRAG 2 cut(s) 523, 598
Sse9I AATT 1 cut(s) 332
SspDI GGCGCC 1 cut(s) 573
SstI GAGCTC 3 cut(s) 409, 605, 624
StyD4I CCNGG 2 cut(s) 40, 325
TaaI ACNGT 3 cut(s) 92, 376, 681
TaiI ACGT 3 cut(s) 169, 384, 517
TaqI TCGA 8 cut(s) 73, 264, 313, 399, 524, 599, 618, 847
TasI AATT 1 cut(s) 332
TauI GCSGC 7 cut(s) 7, 10, 13, 219, 652, 752, 780
TfiI GAWTC 1 cut(s) 537
Tru1I TTAA 1 cut(s) 99
Tru9I TTAA 1 cut(s) 99
TscAI CASTG 1 cut(s) 239
TseFI GTSAC 1 cut(s) 515
TseI GCWGC 5 cut(s) 305, 500, 608, 674, 689
Tsp45I GTSAC 1 cut(s) 515
TspDTI ATGAA 1 cut(s) 834
TspGWI ACGGA 1 cut(s) 359
TspRI CASTG 1 cut(s) 239
Van91I CCANNNNNTGG 1 cut(s) 701
VpaK11BI GGWCC 2 cut(s) 343, 376
XhoI CTCGAG 2 cut(s) 523, 598
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.