Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0011222

Physical Location & Seq

Genomic Coordinates Reverse (-)

21924289 .. 21928235

Gene Structure 3947 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG215300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2157 bp

ATGGTGACTGGGTGGAGAAGGGCCTTCTGCACGTCTATCCCTAAAGACAGACACACCAAAGTTGTAACAGAGAAGCAGCAGCAACAATGTGAAAACACCAACACCAACACCAACAATAACCAAAGCCCCAAAATCACCTCCAAATTCGGTTTCTTCTCCTCCTCCTCAAACCCATCCACGCCTCGCCTTCAATCCCAGCCGGTGTCGACTCCAAGCCTCCGCTGCCGAACCACCACCGCCGCCACAGCACCCACCACCCCCAATTCTTCCCTCCCCAACAGCCCAAAGCTGCAATGCAACGTCCCTGCCACCACCACAACCCCGAAAAAAATGACCTACAGCCCCAGAGTCTTCCACCGATCCAACCCCTCCTCCCCGAAATCGCCTTCCAGCTTCTCCCTCCTCAAATCCACCCTCCGCCTCAACAAAAGTAGATGCGGAATATGCTTGCAGAGCGTGAAAAGTGGTCAAGGTACGGCCATTTTCACAGCCGAGTGCTCCCACTCCTTTCACTTTCCTTGCGTCGCCACCCATGTCAAGCAGCAACCTCTCATGCTCTGCCCCGTCTGCCACGCCACCTGGAAGGAGCTGCCTCTGCTCGAAACTCTCACTCCTCGCACCAATACTAAGCCCGAGTCCAAGCTCAGAGACGTCAAGATCAAGCCCTTGAGGGTTTACAACGACGACGAGCCCCTCATGTCGCCCACCTCCGGCGCCAGGTTCAATCCCATTCCGGAGTCCGACGAAAACGAGGACGAAAACGACGCCGTTGAGTTCCAGGGCTTCTTTGTCAATCCTGATGGCAATAATGTCTGTTCCGGGAATCGCAAGAGTGTGGAGTTTAGTTTGCTGCCTGAATCGGCGGTGGTGGCGCTTGGGAGGAGCTTCGAGACTTACGCCGTCGTCTTGAAAGTCAAAGCTCCGCAGCTTGTGGAAGGTAGAGCGACGTCGCCGTCGCGAAGGGCGCCGATTGACTTGGTGACCGTGGTCGACGTCAGCGCCAATACCAGCCGCGCCAGGATTCAAGCCACCAAACGCGCGTTGCGGTTGATAATTTCTTCTCTCTCCGACGCCGACAGGCTCTCCATCGTGGCCTTCTCGTCCACCTCCAAGAGGCTGCTGCCGTTACGGAGGATGACGTCGCCCGGCCGGAGATCGGCGCGTCGGATAGTCGACGCGCTCTGCGGCGTTGGCCAGGGTATGTGTGTCAACGACGCGCTCAAGAAGGCGGCGAAGGTGTTGCAAGACCGCCGTGAGAGGAACCCCGTCGCTAGCATTATGCTCCTCTCGGACGGCGGCGGCGGCGTTTCCGCCAATCAGAAGCGCTCCTCCCCGGTCGTGTCCTCCACGCGATTCCCCCACCTCGACATCCCCGTCCACACCGTCGGATTAACCGAGACTACCGACGACGCGTTCGCCAAGTGCGTGGGGGGTTTGCTAAGCGTGGTGGTGAAAGACGTGAAGCTCCAGCTCAGCGTCGTAACCGGTTCAGCCAACGCCGAGATCGGGGCGGTTTATTCTCTCACGGGCCGGCCCACGGCTCTCGGATCCGGTTCGATCCGGCTCGGCGACCTCTACGCCGGAGAAGAGCGAGAGCTGCTCGTCGAATTGAAAGTCCCGGTCAATTCCGGCGGGTCGCACACCCAAAACGCGATGATGTCCGTACGGTCCACCTACAGAGACCCGTCGTCGAATGAGCTCGTATTTTCCAAAGAGCGGGCCCTCCTCGTACCGCGTTCGCAAGCCGTCCGATCGCCTTATACCTCTTCCTCCAACCCCAACATCCAACGGCTGCGAAATCTCCACGTCACGGCTCGAGCCGTGGCCGAATCGCGCCGGTTCTTGGAGCGAAACGACTTCTCAGGCGCCCATCACTTGCTGACTTCGGCTCGAGCTCTGCTGCTCCAGTCGAGCTCGGCTTCGGCGGAGGAGTTCCTGCGCGGCTTGGAGGCTGAGCTGGCGGAGCTGCACCGTGGAAGGCAGCACCAGAGTGTGGCCCAGAGGCAGAGAGGGAACGGGCACGTGGAGGAGAAGCCGGAGCCGCTGACGCCGACCTCGGCTTGGCGCGCCGCTGAGAGATTGGCTAAGGTGGCTATAATGAGGAAGTCCATGAACAGAGTCAGCGACTTACACGGCTTCGAAAACGCCAGATTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000741 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006807 GO:0006996 GO:0006997 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009553 GO:0009559 GO:0009561 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009987 GO:0010197 GO:0016020 GO:0016043 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0022622 GO:0030054 GO:0030154 GO:0032446 GO:0032501 GO:0032502 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048229 GO:0048284 GO:0048364 GO:0048731 GO:0048856 GO:0048869 GO:0050896 GO:0055044 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0071840 GO:0071944 GO:0099402 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

VWA VWA_2 VWA_3 zf-RING_11

Protein Analysis

718

Amino Acids

78.39

Weight (kDa)

9.99

Isoelectric Point (pI)

51.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	145 - 190	4.7e-07	Ring finger domain
zf-RING_11	PF17123	146 - 175	1.5e-08	RING-like zinc finger
VWA	PF00092	325 - 471	5.9e-12	von Willebrand factor type A domain
VWA_3	PF13768	325 - 470	1.6e-11	von Willebrand factor type A domain
VWA_2	PF13519	326 - 432	1.1e-15	von Willebrand factor type A domain
WAV3_C	PF25243	593 - 666	4.8e-35	E3 ubiquitin-protein ligase WAV3-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011222)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22680 AT4G37890 AT4G37890
fragaria_vesca	FvH4_1g18891
malus_domestica	MD01G1045900.v1.1 MD15G1305700.v1.1
prunus_persica	Prupe.6G210600_v2.0.a1
pyrus_communis	pycom01g07210 pycom15g26960
rosa_chinensis	RchiOBHm_Chr2g0109851
rosa_laevigata	RLG00000017767
rosa_multiflora	Rmu_co8072298.1_g000001 Rmu_co8290675.1_g000001 Rmu_sc0008299.1_g000001
rosa_roxburghii	Rroxscaffold_2G00133910
rosa_samantha	Rh2AG215300 Rh2BG225400 Rh2CG217200 Rh2DG220800
rosa_wichuraiana	Rw2G016630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	952, 1373
AatII	GACGTC	4 cut(s)	654, 950, 996, 1142
AccB1I	GGYRCC	3 cut(s)	713, 964, 1865
AccB7I	CCANNNNNTGG	1 cut(s)	1993
AccBSI	CCGCTC	1 cut(s)	1717
AccI	GTMKAC	3 cut(s)	206, 990, 1173
AccIII	TCCGGA	1 cut(s)	733
AclWI	GGATC	4 cut(s)	354, 1542, 1552, 1555
AcoI	YGGCCR	4 cut(s)	477, 1147, 1192, 1824
AcsI	RAATTY	1 cut(s)	143
AcvI	CACGTG	1 cut(s)	2023
AfaI	GTAC	3 cut(s)	475, 1665, 1731
AfeI	AGCGCT	1 cut(s)	1325
AflIII	ACRYGT	1 cut(s)	1410
AgeI	ACCGGT	1 cut(s)	1484
AgsI	TTSAA	5 cut(s)	191, 724, 910, 1025, 1612
AhdI	GACNNNNNGTC	1 cut(s)	1687
AjiI	CACGTC	3 cut(s)	33, 1459, 1807
AjnI	CCWGG	5 cut(s)	578, 716, 777, 1016, 1194
AjuI	GAANNNNNNNTTGG	2 cut(s)	134, 166
AleI	CACNNNNGTG	1 cut(s)	1989
Alw21I	GWGCWC	4 cut(s)	500, 1701, 1897, 1916
Alw26I	GTCTC	4 cut(s)	642, 884, 1391, 1674
AlwI	GGATC	4 cut(s)	354, 1542, 1552, 1555
Ama87I	CYCGRG	3 cut(s)	632, 1815, 1890
Aor13HI	TCCGGA	1 cut(s)	733
Aor51HI	AGCGCT	1 cut(s)	1325
ApaI	GGGCCC	1 cut(s)	1723
ApoI	RAATTY	1 cut(s)	143
ArsI	GACNNNNNNTTYG	4 cut(s)	1397, 1429, 1599, 1631
AscI	GGCGCGCC	1 cut(s)	2065
AsiGI	ACCGGT	1 cut(s)	1484
AspS9I	GGNCC	7 cut(s)	21, 1528, 1533, 1668, 1719, 1720, 1996
AsuC2I	CCSGG	4 cut(s)	820, 1146, 1334, 1619
AsuHPI	GGTGA	4 cut(s)	16, 127, 991, 1462
AsuII	TTCGAA	1 cut(s)	2139
AsuNHI	GCTAGC	1 cut(s)	1271
AvaI	CYCGRG	3 cut(s)	632, 1815, 1890
AvaII	GGWCC	1 cut(s)	1668
BaeGI	GKGCMC	2 cut(s)	1723, 2022
BalI	TGGCCA	1 cut(s)	1194
BamHI	GGATCC	1 cut(s)	1547
BanI	GGYRCC	3 cut(s)	713, 964, 1865
BanII	GRGCYC	5 cut(s)	693, 1701, 1723, 1897, 1916
BbrPI	CACGTG	1 cut(s)	2023
BbsI	GAAGAC	1 cut(s)	343
Bbv12I	GWGCWC	4 cut(s)	500, 1701, 1897, 1916
BccI	CCATC	4 cut(s)	181, 794, 1094, 1878
BcgI	CGANNNNNNTGC	2 cut(s)	1222, 1256
BciT130I	CCWGG	5 cut(s)	580, 718, 779, 1018, 1196
BcnI	CCSGG	4 cut(s)	820, 1146, 1334, 1619
BcoDI	GTCTC	4 cut(s)	642, 884, 1391, 1674
BfaI	CTAG	1 cut(s)	1272
BfmI	CTRYAG	2 cut(s)	337, 1675
BfoI	RGCGCY	6 cut(s)	717, 875, 968, 1002, 1327, 1869
BlpI	GCTNAGC	3 cut(s)	1439, 1472, 1953
Bme1390I	CCNGG	9 cut(s)	580, 718, 779, 820, 1018, 1146, 1196, 1334, 1619
Bme18I	GGWCC	1 cut(s)	1668
BmeRI	GACNNNNNGTC	1 cut(s)	1687
BmeT110I	CYCGRG	3 cut(s)	632, 1815, 1890
BmgBI	CACGTC	3 cut(s)	33, 1459, 1807
BmgT120I	GGNCC	7 cut(s)	21, 1528, 1533, 1668, 1719, 1720, 1996
BmiI	GGNNCC	7 cut(s)	715, 966, 1262, 1549, 1721, 1867, 2040
BmrFI	CCNGG	9 cut(s)	580, 718, 779, 820, 1018, 1146, 1196, 1334, 1619
BmrI	ACTGGG	1 cut(s)	18
BmsI	GCATC	1 cut(s)	425
BmtI	GCTAGC	1 cut(s)	1275
BmuI	ACTGGG	1 cut(s)	18
BoxI	GACNNNNGTC	1 cut(s)	986
BpiI	GAAGAC	1 cut(s)	343
BplI	GAGNNNNNCTC	2 cut(s)	1584, 1616
BpmI	CTGGAG	2 cut(s)	1451, 1889
Bpu10I	CCTNAGC	1 cut(s)	2085
Bpu1102I	GCTNAGC	3 cut(s)	1439, 1472, 1953
Bpu14I	TTCGAA	1 cut(s)	2139
BpuEI	CTTGAG	2 cut(s)	688, 1205
BpuMI	CCSGG	4 cut(s)	820, 1146, 1334, 1619
BsaAI	YACGTR	1 cut(s)	2023
BsaI	GGTCTC	1 cut(s)	1674
BsaJI	CCNNGG	8 cut(s)	778, 984, 1195, 1332, 1536, 1821, 1972, 2055
BsaWI	WCCGGW	3 cut(s)	733, 1484, 1550
BsaXI	ACNNNNNCTCC	6 cut(s)	356, 386, 595, 625, 1067, 1097
Bse118I	RCCGGY	4 cut(s)	199, 1484, 1530, 1836
Bse1I	ACTGG	2 cut(s)	13, 1906
Bse3DI	GCAATG	1 cut(s)	299
BseAI	TCCGGA	1 cut(s)	733
BseBI	CCWGG	5 cut(s)	580, 718, 779, 1018, 1196
BseDI	CCNNGG	8 cut(s)	778, 984, 1195, 1332, 1536, 1821, 1972, 2055
BseGI	GGATG	4 cut(s)	173, 1140, 1368, 1782
BseMI	GCAATG	1 cut(s)	299
BseMII	CTCAG	5 cut(s)	658, 1486, 1875, 1944, 2064
BseNI	ACTGG	2 cut(s)	13, 1906
BsePI	GCGCGC	1 cut(s)	2065
BseSI	GKGCMC	2 cut(s)	1723, 2022
BseX3I	CGGCCG	1 cut(s)	1147
BseYI	CCCAGC	1 cut(s)	195
BsgI	GTGCAG	2 cut(s)	13, 1952
Bsh1285I	CGRYCG	3 cut(s)	1150, 1338, 1754
BshNI	GGYRCC	3 cut(s)	713, 964, 1865
BshTI	ACCGGT	1 cut(s)	1484
BsiEI	CGRYCG	3 cut(s)	1150, 1338, 1754
BsiHKAI	GWGCWC	4 cut(s)	500, 1701, 1897, 1916
BsiHKCI	CYCGRG	3 cut(s)	632, 1815, 1890
BsiWI	CGTACG	1 cut(s)	1663
BslFI	GGGAC	2 cut(s)	287, 1601
BsmAI	GTCTC	4 cut(s)	642, 884, 1391, 1674
BsmBI	CGTCTC	1 cut(s)	642
BsmFI	GGGAC	2 cut(s)	287, 1601
Bso31I	GGTCTC	1 cut(s)	1674
BsoBI	CYCGRG	3 cut(s)	632, 1815, 1890
Bsp119I	TTCGAA	1 cut(s)	2139
Bsp120I	GGGCCC	1 cut(s)	1719
Bsp1286I	GDGCHC	7 cut(s)	500, 693, 1701, 1723, 1897, 1916, 2022
Bsp13I	TCCGGA	1 cut(s)	733
Bsp143I	GATC	7 cut(s)	359, 657, 1154, 1503, 1547, 1557, 1751
Bsp1720I	GCTNAGC	3 cut(s)	1439, 1472, 1953
Bsp68I	TCGCGA	1 cut(s)	958
BspCNI	CTCAG	5 cut(s)	657, 1485, 1874, 1945, 2065
BspEI	TCCGGA	1 cut(s)	733
BspLI	GGNNCC	7 cut(s)	715, 966, 1262, 1549, 1721, 1867, 2040
BspOI	GCTAGC	1 cut(s)	1275
BspPI	GGATC	4 cut(s)	354, 1542, 1552, 1555
BspQI	GCTCTTC	1 cut(s)	1581
BspT104I	TTCGAA	1 cut(s)	2139
BspT107I	GGYRCC	3 cut(s)	713, 964, 1865
BspTNI	GGTCTC	1 cut(s)	1674
BsrBI	CCGCTC	1 cut(s)	1717
BsrDI	GCAATG	1 cut(s)	299
BsrFI	RCCGGY	4 cut(s)	199, 1484, 1530, 1836
BsrI	ACTGG	2 cut(s)	13, 1906
BssAI	RCCGGY	4 cut(s)	199, 1484, 1530, 1836
BssECI	CCNNGG	8 cut(s)	778, 984, 1195, 1332, 1536, 1821, 1972, 2055
BssHII	GCGCGC	1 cut(s)	2065
BssMI	GATC	7 cut(s)	359, 657, 1154, 1503, 1547, 1557, 1751
Bst2UI	CCWGG	5 cut(s)	580, 718, 779, 1018, 1196
Bst4CI	ACNGT	4 cut(s)	985, 1384, 1668, 1973
Bst6I	CTCTTC	2 cut(s)	1581, 1771
BstBAI	YACGTR	1 cut(s)	2023
BstBI	TTCGAA	1 cut(s)	2139
BstC8I	GCNNGC	7 cut(s)	449, 1273, 1532, 1719, 1743, 1959, 2067
BstDEI	CTNAG	8 cut(s)	627, 644, 1439, 1472, 1861, 1953, 2073, 2085
BstDSI	CCRYGG	4 cut(s)	984, 1536, 1821, 1972
BstEII	GGTNACC	1 cut(s)	979
BstENI	CCTNNNNNAGG	1 cut(s)	1111
BstF5I	GGATG	4 cut(s)	173, 1140, 1368, 1782
BstH2I	RGCGCY	6 cut(s)	717, 875, 968, 1002, 1327, 1869
BstKTI	GATC	7 cut(s)	362, 660, 1157, 1506, 1550, 1560, 1754
BstMAI	GTCTC	4 cut(s)	642, 884, 1391, 1674
BstMBI	GATC	7 cut(s)	359, 657, 1154, 1503, 1547, 1557, 1751
BstMCI	CGRYCG	3 cut(s)	1150, 1338, 1754
BstNI	CCWGG	5 cut(s)	580, 718, 779, 1018, 1196
BstPAI	GACNNNNGTC	1 cut(s)	986
BstPI	GGTNACC	1 cut(s)	979
BstSCI	CCNGG	9 cut(s)	578, 716, 777, 818, 1016, 1144, 1194, 1332, 1617
BstSFI	CTRYAG	2 cut(s)	337, 1675
BstSLI	GKGCMC	2 cut(s)	1723, 2022
BstV2I	GAAGAC	1 cut(s)	343
BstX2I	RGATCY	1 cut(s)	1547
BstXI	CCANNNNNNTGG	1 cut(s)	1426
BstYI	RGATCY	1 cut(s)	1547
BstZI	CGGCCG	1 cut(s)	1147
BtgI	CCRYGG	4 cut(s)	984, 1536, 1821, 1972
BtgZI	GCGATG	1 cut(s)	1667
BtrI	CACGTC	3 cut(s)	33, 1459, 1807
BtsCI	GGATG	4 cut(s)	173, 1140, 1368, 1782
BtuMI	TCGCGA	1 cut(s)	958
Cac8I	GCNNGC	7 cut(s)	449, 1273, 1532, 1719, 1743, 1959, 2067
Cfr10I	RCCGGY	4 cut(s)	199, 1484, 1530, 1836
Cfr13I	GGNCC	7 cut(s)	21, 1528, 1533, 1668, 1719, 1720, 1996
CseI	GACGC	9 cut(s)	511, 773, 1079, 1151, 1184, 1223, 1418, 1465, 2056
Csp6I	GTAC	3 cut(s)	474, 1664, 1730
CspAI	ACCGGT	1 cut(s)	1484
CviAII	CATG	4 cut(s)	533, 553, 697, 2110
CviQI	GTAC	3 cut(s)	474, 1664, 1730
DdeI	CTNAG	8 cut(s)	627, 644, 1439, 1472, 1861, 1953, 2073, 2085
DinI	GGCGCC	3 cut(s)	715, 966, 1867
DpnI	GATC	7 cut(s)	361, 659, 1156, 1505, 1549, 1559, 1753
DpnII	GATC	7 cut(s)	359, 657, 1154, 1503, 1547, 1557, 1751
DrdI	GACNNNNNNGTC	2 cut(s)	952, 1373
DriI	GACNNNNNGTC	1 cut(s)	1687
DseDI	GACNNNNNNGTC	2 cut(s)	952, 1373
EaeI	YGGCCR	4 cut(s)	477, 1147, 1192, 1824
EagI	CGGCCG	1 cut(s)	1147
Eam1104I	CTCTTC	2 cut(s)	1581, 1771
Eam1105I	GACNNNNNGTC	1 cut(s)	1687
EarI	CTCTTC	2 cut(s)	1581, 1771
EciI	GGCGGA	4 cut(s)	407, 1300, 1940, 1976
Ecl136II	GAGCTC	3 cut(s)	1699, 1895, 1914
EclXI	CGGCCG	1 cut(s)	1147
Eco24I	GRGCYC	5 cut(s)	693, 1701, 1723, 1897, 1916
Eco31I	GGTCTC	1 cut(s)	1674
Eco47I	GGWCC	1 cut(s)	1668
Eco47III	AGCGCT	1 cut(s)	1325
Eco52I	CGGCCG	1 cut(s)	1147
Eco53kI	GAGCTC	3 cut(s)	1699, 1895, 1914
Eco72I	CACGTG	1 cut(s)	2023
Eco88I	CYCGRG	3 cut(s)	632, 1815, 1890
Eco91I	GGTNACC	1 cut(s)	979
EcoICRI	GAGCTC	3 cut(s)	1699, 1895, 1914
EcoNI	CCTNNNNNAGG	1 cut(s)	1111
EcoO109I	RGGNCCY	2 cut(s)	21, 1720
EcoO65I	GGTNACC	1 cut(s)	979
EcoRII	CCWGG	5 cut(s)	578, 716, 777, 1016, 1194
EcoT38I	GRGCYC	5 cut(s)	693, 1701, 1723, 1897, 1916
EgeI	GGCGCC	3 cut(s)	715, 966, 1867
EheI	GGCGCC	3 cut(s)	715, 966, 1867
Esp3I	CGTCTC	1 cut(s)	642
FaeI	CATG	4 cut(s)	536, 556, 700, 2113
FaiI	YATR	9 cut(s)	445, 534, 554, 698, 1202, 1280, 1761, 2096, 2111
FaqI	GGGAC	2 cut(s)	287, 1601
FatI	CATG	4 cut(s)	532, 552, 696, 2109
FauI	CCCGC	2 cut(s)	1625, 1710
FblI	GTMKAC	3 cut(s)	206, 990, 1173
FokI	GGATG	4 cut(s)	160, 1147, 1355, 1769
FriOI	GRGCYC	5 cut(s)	693, 1701, 1723, 1897, 1916
FseI	GGCCGGCC	1 cut(s)	1534
FspBI	CTAG	1 cut(s)	1272
GsaI	CCCAGC	1 cut(s)	199
GsuI	CTGGAG	2 cut(s)	1451, 1889
HaeII	RGCGCY	6 cut(s)	717, 875, 968, 1002, 1327, 1869
HgaI	GACGC	9 cut(s)	511, 773, 1079, 1151, 1184, 1223, 1418, 1465, 2056
Hin1II	CATG	4 cut(s)	536, 556, 700, 2113
HincII	GTYRAC	4 cut(s)	207, 991, 1174, 1210
HindII	GTYRAC	4 cut(s)	207, 991, 1174, 1210
HphI	GGTGA	4 cut(s)	16, 127, 991, 1462
Hpy166II	GTNNAC	8 cut(s)	207, 676, 991, 1104, 1174, 1210, 1378, 1671
Hpy188I	TCNGA	9 cut(s)	647, 742, 1069, 1167, 1291, 1320, 1388, 1547, 1751
Hpy188III	TCNNGA	7 cut(s)	655, 734, 797, 889, 907, 957, 1222
Hpy8I	GTNNAC	8 cut(s)	207, 676, 991, 1104, 1174, 1210, 1378, 1671
HpyCH4III	ACNGT	4 cut(s)	985, 1384, 1668, 1973
HpyCH4IV	ACGT	9 cut(s)	32, 300, 651, 947, 993, 1139, 1458, 1806, 2022
HpyCH4V	TGCA	6 cut(s)	30, 292, 297, 451, 1243, 1969
HpyF3I	CTNAG	8 cut(s)	627, 644, 1439, 1472, 1861, 1953, 2073, 2085
HpySE526I	ACGT	9 cut(s)	32, 300, 651, 947, 993, 1139, 1458, 1806, 2022
Hsp92II	CATG	4 cut(s)	536, 556, 700, 2113
KasI	GGCGCC	3 cut(s)	713, 964, 1865
Kpn2I	TCCGGA	1 cut(s)	733
KroI	GCCGGC	1 cut(s)	1530
KroNI	GCCGGC	1 cut(s)	1532
Kzo9I	GATC	7 cut(s)	359, 657, 1154, 1503, 1547, 1557, 1751
LguI	GCTCTTC	1 cut(s)	1581
LweI	GCATC	1 cut(s)	425
MaeI	CTAG	1 cut(s)	1272
MaeII	ACGT	9 cut(s)	32, 300, 651, 947, 993, 1139, 1458, 1806, 2022
MaeIII	GTNAC	6 cut(s)	4, 64, 979, 1125, 1480, 1807
MalI	GATC	7 cut(s)	361, 659, 1156, 1505, 1549, 1559, 1753
MbiI	CCGCTC	1 cut(s)	1717
MboI	GATC	7 cut(s)	359, 657, 1154, 1503, 1547, 1557, 1751
MboII	GAAGA	6 cut(s)	145, 258, 343, 1050, 1598, 1758
MflI	RGATCY	1 cut(s)	1547
MhlI	GDGCHC	7 cut(s)	500, 693, 1701, 1723, 1897, 1916, 2022
MlsI	TGGCCA	1 cut(s)	1194
MluCI	AATT	5 cut(s)	143, 262, 1053, 1607, 1624
MluI	ACGCGT	1 cut(s)	1410
MluNI	TGGCCA	1 cut(s)	1194
Mly113I	GGCGCC	3 cut(s)	714, 965, 1866
MlyI	GAGTC	5 cut(s)	202, 357, 644, 746, 2127
MmeI	TCCRAC	7 cut(s)	387, 765, 1092, 1145, 1366, 1797, 1810
Mox20I	TGGCCA	1 cut(s)	1194
MroI	TCCGGA	1 cut(s)	733
MroNI	GCCGGC	1 cut(s)	1530
MscI	TGGCCA	1 cut(s)	1194
MseI	TTAA	1 cut(s)	1391
MslI	CAYNNNNRTG	1 cut(s)	1989
Msp20I	TGGCCA	1 cut(s)	1194
MspA1I	CMGCKG	3 cut(s)	222, 2044, 2072
MspR9I	CCNGG	9 cut(s)	580, 718, 779, 820, 1018, 1146, 1196, 1334, 1619
MvaI	CCWGG	5 cut(s)	580, 718, 779, 1018, 1196
NaeI	GCCGGC	1 cut(s)	1532
NarI	GGCGCC	3 cut(s)	714, 965, 1866
NciI	CCSGG	4 cut(s)	820, 1146, 1334, 1619
NdeII	GATC	7 cut(s)	359, 657, 1154, 1503, 1547, 1557, 1751
NgoMIV	GCCGGC	1 cut(s)	1530
NheI	GCTAGC	1 cut(s)	1271
NlaIII	CATG	4 cut(s)	536, 556, 700, 2113
NlaIV	GGNNCC	7 cut(s)	715, 966, 1262, 1549, 1721, 1867, 2040
NmeAIII	GCCGAG	5 cut(s)	517, 1525, 1545, 1895, 2036
NmuCI	GTSAC	3 cut(s)	4, 979, 1807
NruI	TCGCGA	1 cut(s)	958
NspV	TTCGAA	1 cut(s)	2139
OliI	CACNNNNGTG	1 cut(s)	1989
PaeR7I	CTCGAG	2 cut(s)	1815, 1890
PalAI	GGCGCGCC	1 cut(s)	2065
PauI	GCGCGC	1 cut(s)	2065
PciSI	GCTCTTC	1 cut(s)	1581
PcsI	WCGNNNNNNNCGW	3 cut(s)	1371, 1392, 1422
PdiI	GCCGGC	1 cut(s)	1532
PfeI	GAWTC	5 cut(s)	823, 857, 1021, 1353, 1829
Pfl23II	CGTACG	1 cut(s)	1663
PflMI	CCANNNNNTGG	1 cut(s)	1993
PfoI	TCCNGGA	1 cut(s)	818
PinAI	ACCGGT	1 cut(s)	1484
Ple19I	CGATCG	1 cut(s)	1754
PleI	GAGTC	5 cut(s)	202, 356, 643, 745, 2126
PluTI	GGCGCC	3 cut(s)	717, 968, 1869
PmaCI	CACGTG	1 cut(s)	2023
PmlI	CACGTG	1 cut(s)	2023
PpsI	GAGTC	5 cut(s)	202, 356, 643, 745, 2126
Ppu21I	YACGTR	1 cut(s)	2023
PshAI	GACNNNNGTC	1 cut(s)	986
Psp124BI	GAGCTC	3 cut(s)	1701, 1897, 1916
Psp6I	CCWGG	5 cut(s)	578, 716, 777, 1016, 1194
PspCI	CACGTG	1 cut(s)	2023
PspEI	GGTNACC	1 cut(s)	979
PspFI	CCCAGC	1 cut(s)	195
PspGI	CCWGG	5 cut(s)	578, 716, 777, 1016, 1194
PspLI	CGTACG	1 cut(s)	1663
PspN4I	GGNNCC	7 cut(s)	715, 966, 1262, 1549, 1721, 1867, 2040
PspOMI	GGGCCC	1 cut(s)	1719
PspPI	GGNCC	7 cut(s)	21, 1528, 1533, 1668, 1719, 1720, 1996
PspXI	VCTCGAGB	2 cut(s)	1815, 1890
PsuI	RGATCY	1 cut(s)	1547
PteI	GCGCGC	1 cut(s)	2065
PvuI	CGATCG	1 cut(s)	1754
RigI	GGCCGGCC	1 cut(s)	1534
RruI	TCGCGA	1 cut(s)	958
RsaI	GTAC	3 cut(s)	475, 1665, 1731
RsaNI	GTAC	3 cut(s)	474, 1664, 1730
RseI	CAYNNNNRTG	1 cut(s)	1989
SacI	GAGCTC	3 cut(s)	1701, 1897, 1916
SalI	GTCGAC	3 cut(s)	205, 989, 1172
SapI	GCTCTTC	1 cut(s)	1581
SaqAI	TTAA	1 cut(s)	1391
Sau3AI	GATC	7 cut(s)	359, 657, 1154, 1503, 1547, 1557, 1751
Sau96I	GGNCC	7 cut(s)	21, 1528, 1533, 1668, 1719, 1720, 1996
SchI	GAGTC	5 cut(s)	202, 357, 644, 746, 2127
ScrFI	CCNGG	9 cut(s)	580, 718, 779, 820, 1018, 1146, 1196, 1334, 1619
SduI	GDGCHC	7 cut(s)	500, 693, 1701, 1723, 1897, 1916, 2022
SfaNI	GCATC	1 cut(s)	425
SfcI	CTRYAG	2 cut(s)	337, 1675
SfoI	GGCGCC	3 cut(s)	715, 966, 1867
Sfr274I	CTCGAG	2 cut(s)	1815, 1890
SfuI	TTCGAA	1 cut(s)	2139
SgsI	GGCGCGCC	1 cut(s)	2065
SinI	GGWCC	1 cut(s)	1668
SlaI	CTCGAG	2 cut(s)	1815, 1890
SmiMI	CAYNNNNRTG	1 cut(s)	1989
SmlI	CTYRAG	4 cut(s)	667, 1220, 1815, 1890
SmoI	CTYRAG	4 cut(s)	667, 1220, 1815, 1890
Sse9I	AATT	5 cut(s)	143, 262, 1053, 1607, 1624
SspDI	GGCGCC	3 cut(s)	713, 964, 1865
SspMI	CTAG	1 cut(s)	1272
SstI	GAGCTC	3 cut(s)	1701, 1897, 1916
StyD4I	CCNGG	9 cut(s)	578, 716, 777, 818, 1016, 1144, 1194, 1332, 1617
TaaI	ACNGT	4 cut(s)	985, 1384, 1668, 1973
TaiI	ACGT	9 cut(s)	35, 303, 654, 950, 996, 1142, 1461, 1809, 2025
TasI	AATT	5 cut(s)	143, 262, 1053, 1607, 1624
TfiI	GAWTC	5 cut(s)	823, 857, 1021, 1353, 1829
Tru1I	TTAA	1 cut(s)	1391
Tru9I	TTAA	1 cut(s)	1391
TseFI	GTSAC	3 cut(s)	4, 979, 1807
Tsp45I	GTSAC	3 cut(s)	4, 979, 1807
TspDTI	ATGAA	1 cut(s)	2126
TspGWI	ACGGA	2 cut(s)	1144, 1651
Van91I	CCANNNNNTGG	1 cut(s)	1993
VpaK11BI	GGWCC	1 cut(s)	1668
XagI	CCTNNNNNAGG	1 cut(s)	1111
XapI	RAATTY	1 cut(s)	143
XhoI	CTCGAG	2 cut(s)	1815, 1890
XmiI	GTMKAC	3 cut(s)	206, 990, 1173
XspI	CTAG	1 cut(s)	1272
ZraI	GACGTC	4 cut(s)	652, 948, 994, 1140

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.