Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008299.1

Orthogroup ID

OG0011222

Physical Location & Seq

Genomic Coordinates Forward (+)

812 .. 3488

Gene Structure 2677 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008299.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2127 bp

atggtgactgggtggagaagggccttctgcacgtctatccctaaagacagacacaccaaagttgtaacggagaagcagcagcaacaatgtgaaaacaccaacaccaacaataaccaaagccccaaaatcacctccaaattcggtttcttctcatcttcctcaaacccatccacgcctcgccttcaatcccagccggtgtcgactccaagcctccgctgccgaaccaccaccacccccaattcttccctccccaacagcccaaaactgcaatgcaacgtccctgccaccccgaaaaaaatgaccgacagccccagagtcttccaccgatccaacccctcctccccgaaatcgccttccagcttctccctcctcaaatccaccctccgcctcaacaaaagtagatgcggaatctgcttgcagagcgtgaaaagtggtcaaggtacggccattttcaccgccgagtgctcccactcctttcactttccttgcgtcgccacccatgtcaagcagcagcccctcatgctctgccccgtctgccacgccacctggaaggagctgcctctgctcgaaactctcactcctcgcaccaataccaagcccgactccaagctcagagacgtcaagatcaagcccttgagggtctacaacgacgacgagcccctcatgtcgcccacctccggcgccaggttcaatcccattccggagtccgacgaaaacgaggacgagaacgacgccgttgagttccagggcttctttgtcaatcctgatacgaataatgtctgttccgggaatcgcaggagcgtggagtttagtttgctgcctgaatcggcggtggtggcgcttgggaggagcttcgagacttacgccgtcgtcttgaaagtcaaagctccgcagcttgtggaaggcagagcgacgtcgtcgtcgcgaagggcgccgattgacttggtgaccgtggtcgacgtcagcgccaataccagccgcgccaggattcaggccaccaaacgcgcgttgcggttgatcatttcttctctctccgacgccgacaggctctccatcgtggccttctcgtccacctccaagaggctgctgccgttacggaggatgacgtcgcccggccggagatcggcgcgtcggatagtcgacgcgctctgcggcgtcggccaggggatgtgtgtcaacgacgcgctcaagaaggcggccaaggtgttgcaagaccgccgggagaggaaccccgtcgctagcattatgctcctctcggacggcggcggcggcggcgtttccgccaatcagaagcgctcctccccggtcgtgtcctccacgcgcttcccccacctcgacatccccgtccacaccgtcggattaaccgagactaccgacgacgcgttcgccaagtgcgtcgggggtttgctaagcgtggtggtgaaagacgtgaagctccagctcagcgtcgtaaccggttcagccaacgccgagatcgcggcggtttattctctcactggccggcccacggctctcggttccggttcgatccggctcggcgacctctacgccggagaagagcgagagctgctcgtcgagttgaaagtcccggtcaattccggcgggtcccacacccaaaacgcgatgatgtccgtacggtccacgtacagagacccgtcgtcgaatgagctcgtattttccaaagagcgggccctcctcgtaccgcgctcgcaagccgtccgatcgccttctacctcttcctccaaccccaacatccaacggctgcgtaatctccacgtcacggctcgagccgtggccgaatcgcgccggttcttggagcgaaacgacttctcaggcgcccatcacttgctgacttcggctcgagctctgctgctccagtcgagctcggcttcggcggaggagttcctgcgcggcttggaggctgagctggcggagctgcaccgtggaaggcagcaccagagtgtggcccagaggcagagagggaacgggcacttggaggagaagccggagccgctgacgccgacctcggcttggcgcgccgccgagagattggctaaggtggctataatgaggaagtccatgaacagagtcagcgacttacacggcttcgaaaacgccagattttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000741 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006807 GO:0006996 GO:0006997 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009553 GO:0009559 GO:0009561 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009987 GO:0010197 GO:0016020 GO:0016043 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0022622 GO:0030054 GO:0030154 GO:0032446 GO:0032501 GO:0032502 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048229 GO:0048284 GO:0048364 GO:0048731 GO:0048856 GO:0048869 GO:0050896 GO:0055044 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0071840 GO:0071944 GO:0099402 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

VWA VWA_2 VWA_3 zf-RING_11

Protein Analysis

708

Amino Acids

77.37

Weight (kDa)

10.01

Isoelectric Point (pI)

54.0

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011222)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22680 AT4G37890 AT4G37890
fragaria_vesca	FvH4_1g18891
malus_domestica	MD01G1045900.v1.1 MD15G1305700.v1.1
prunus_persica	Prupe.6G210600_v2.0.a1
pyrus_communis	pycom01g07210 pycom15g26960
rosa_chinensis	RchiOBHm_Chr2g0109851
rosa_laevigata	RLG00000017767
rosa_multiflora	Rmu_co8072298.1_g000001 Rmu_co8290675.1_g000001 Rmu_sc0008299.1_g000001
rosa_roxburghii	Rroxscaffold_2G00133910
rosa_samantha	Rh2AG215300 Rh2BG225400 Rh2CG217200 Rh2DG220800
rosa_wichuraiana	Rw2G016630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	919, 1343
AatII	GACGTC	4 cut(s)	621, 917, 963, 1109
AccB1I	GGYRCC	3 cut(s)	680, 931, 1835
AccB7I	CCANNNNNTGG	1 cut(s)	1963
AccBSI	CCGCTC	1 cut(s)	1687
AccI	GTMKAC	4 cut(s)	200, 642, 957, 1140
AccIII	TCCGGA	1 cut(s)	700
AclWI	GGATC	2 cut(s)	321, 1522
AcoI	YGGCCR	6 cut(s)	444, 1114, 1159, 1197, 1498, 1794
AcsI	RAATTY	1 cut(s)	137
AfaI	GTAC	4 cut(s)	442, 1635, 1646, 1701
AfeI	AGCGCT	1 cut(s)	1295
AflIII	ACRYGT	1 cut(s)	1380
AgeI	ACCGGT	1 cut(s)	1454
AgsI	TTSAA	4 cut(s)	185, 691, 877, 1582
AhdI	GACNNNNNGTC	1 cut(s)	1657
AjiI	CACGTC	3 cut(s)	33, 1429, 1777
AjnI	CCWGG	5 cut(s)	545, 683, 744, 983, 1161
AjuI	GAANNNNNNNTTGG	4 cut(s)	128, 160, 1976, 2008
AleI	CACNNNNGTG	1 cut(s)	1959
Alw21I	GWGCWC	4 cut(s)	467, 1671, 1867, 1886
Alw26I	GTCTC	4 cut(s)	609, 851, 1361, 1644
AlwI	GGATC	2 cut(s)	321, 1522
Ama87I	CYCGRG	2 cut(s)	1785, 1860
Aor13HI	TCCGGA	1 cut(s)	700
Aor51HI	AGCGCT	1 cut(s)	1295
ApaI	GGGCCC	1 cut(s)	1693
ApoI	RAATTY	1 cut(s)	137
ArsI	GACNNNNNNTTYG	2 cut(s)	1367, 1399
AscI	GGCGCGCC	1 cut(s)	2035
AsiGI	ACCGGT	1 cut(s)	1454
AspS9I	GGNCC	7 cut(s)	21, 1503, 1605, 1638, 1689, 1690, 1966
AsuC2I	CCSGG	5 cut(s)	787, 1113, 1220, 1304, 1589
AsuHPI	GGTGA	5 cut(s)	16, 121, 445, 958, 1432
AsuII	TTCGAA	1 cut(s)	2109
AsuNHI	GCTAGC	1 cut(s)	1238
AvaI	CYCGRG	2 cut(s)	1785, 1860
AvaII	GGWCC	2 cut(s)	1605, 1638
BaeGI	GKGCMC	2 cut(s)	1693, 1992
BanI	GGYRCC	3 cut(s)	680, 931, 1835
BanII	GRGCYC	5 cut(s)	660, 1671, 1693, 1867, 1886
BbsI	GAAGAC	1 cut(s)	310
Bbv12I	GWGCWC	4 cut(s)	467, 1671, 1867, 1886
BccI	CCATC	3 cut(s)	175, 1061, 1848
BciT130I	CCWGG	5 cut(s)	547, 685, 746, 985, 1163
BclI	TGATCA	1 cut(s)	1017
BcnI	CCSGG	5 cut(s)	787, 1113, 1220, 1304, 1589
BcoDI	GTCTC	4 cut(s)	609, 851, 1361, 1644
BfaI	CTAG	1 cut(s)	1239
BfoI	RGCGCY	6 cut(s)	684, 842, 935, 969, 1297, 1839
BlpI	GCTNAGC	3 cut(s)	1409, 1442, 1923
Bme18I	GGWCC	2 cut(s)	1605, 1638
BmeRI	GACNNNNNGTC	1 cut(s)	1657
BmeT110I	CYCGRG	2 cut(s)	1785, 1860
BmgBI	CACGTC	3 cut(s)	33, 1429, 1777
BmgT120I	GGNCC	7 cut(s)	21, 1503, 1605, 1638, 1689, 1690, 1966
BmiI	GGNNCC	9 cut(s)	682, 933, 1229, 1519, 1606, 1607, 1691, 1837, 2010
BmrI	ACTGGG	1 cut(s)	18
BmsI	GCATC	1 cut(s)	392
BmtI	GCTAGC	1 cut(s)	1242
BmuI	ACTGGG	1 cut(s)	18
BoxI	GACNNNNGTC	1 cut(s)	953
BpiI	GAAGAC	1 cut(s)	310
BplI	GAGNNNNNCTC	2 cut(s)	1554, 1586
BpmI	CTGGAG	2 cut(s)	1421, 1859
Bpu10I	CCTNAGC	1 cut(s)	2055
Bpu1102I	GCTNAGC	3 cut(s)	1409, 1442, 1923
Bpu14I	TTCGAA	1 cut(s)	2109
BpuEI	CTTGAG	2 cut(s)	655, 1172
BpuMI	CCSGG	5 cut(s)	787, 1113, 1220, 1304, 1589
BsaAI	YACGTR	1 cut(s)	1644
BsaI	GGTCTC	1 cut(s)	1644
BsaJI	CCNNGG	9 cut(s)	745, 951, 1162, 1200, 1302, 1506, 1791, 1942, 2025
BsaWI	WCCGGW	3 cut(s)	700, 1454, 1520
BsaXI	ACNNNNNCTCC	6 cut(s)	323, 353, 562, 592, 1034, 1064
Bse118I	RCCGGY	4 cut(s)	193, 1454, 1500, 1806
Bse1I	ACTGG	3 cut(s)	13, 1501, 1876
Bse3DI	GCAATG	1 cut(s)	275
BseAI	TCCGGA	1 cut(s)	700
BseBI	CCWGG	5 cut(s)	547, 685, 746, 985, 1163
BseDI	CCNNGG	9 cut(s)	745, 951, 1162, 1200, 1302, 1506, 1791, 1942, 2025
BseGI	GGATG	5 cut(s)	167, 1107, 1173, 1338, 1752
BseMI	GCAATG	1 cut(s)	275
BseMII	CTCAG	4 cut(s)	625, 1456, 1845, 1914
BseNI	ACTGG	3 cut(s)	13, 1501, 1876
BsePI	GCGCGC	1 cut(s)	2035
BseRI	GAGGAG	9 cut(s)	328, 359, 570, 862, 1241, 1288, 1685, 1913, 2012
BseSI	GKGCMC	2 cut(s)	1693, 1992
BseX3I	CGGCCG	1 cut(s)	1114
BseYI	CCCAGC	1 cut(s)	189
BsgI	GTGCAG	2 cut(s)	13, 1922
Bsh1285I	CGRYCG	3 cut(s)	1117, 1308, 1724
BshNI	GGYRCC	3 cut(s)	680, 931, 1835
BshTI	ACCGGT	1 cut(s)	1454
BsiEI	CGRYCG	3 cut(s)	1117, 1308, 1724
BsiHKAI	GWGCWC	4 cut(s)	467, 1671, 1867, 1886
BsiHKCI	CYCGRG	2 cut(s)	1785, 1860
BsiWI	CGTACG	1 cut(s)	1633
BslFI	GGGAC	3 cut(s)	263, 1571, 1591
BsmAI	GTCTC	4 cut(s)	609, 851, 1361, 1644
BsmBI	CGTCTC	1 cut(s)	609
BsmFI	GGGAC	3 cut(s)	263, 1571, 1591
Bso31I	GGTCTC	1 cut(s)	1644
BsoBI	CYCGRG	2 cut(s)	1785, 1860
Bsp119I	TTCGAA	1 cut(s)	2109
Bsp120I	GGGCCC	1 cut(s)	1689
Bsp1286I	GDGCHC	7 cut(s)	467, 660, 1671, 1693, 1867, 1886, 1992
Bsp13I	TCCGGA	1 cut(s)	700
Bsp143I	GATC	7 cut(s)	326, 624, 1017, 1121, 1473, 1527, 1721
Bsp1720I	GCTNAGC	3 cut(s)	1409, 1442, 1923
Bsp68I	TCGCGA	1 cut(s)	925
BspCNI	CTCAG	4 cut(s)	624, 1455, 1844, 1915
BspEI	TCCGGA	1 cut(s)	700
BspLI	GGNNCC	9 cut(s)	682, 933, 1229, 1519, 1606, 1607, 1691, 1837, 2010
BspOI	GCTAGC	1 cut(s)	1242
BspPI	GGATC	2 cut(s)	321, 1522
BspQI	GCTCTTC	1 cut(s)	1551
BspT104I	TTCGAA	1 cut(s)	2109
BspT107I	GGYRCC	3 cut(s)	680, 931, 1835
BspTNI	GGTCTC	1 cut(s)	1644
BsrBI	CCGCTC	1 cut(s)	1687
BsrDI	GCAATG	1 cut(s)	275
BsrFI	RCCGGY	4 cut(s)	193, 1454, 1500, 1806
BsrI	ACTGG	3 cut(s)	13, 1501, 1876
BssAI	RCCGGY	4 cut(s)	193, 1454, 1500, 1806
BssECI	CCNNGG	9 cut(s)	745, 951, 1162, 1200, 1302, 1506, 1791, 1942, 2025
BssHII	GCGCGC	1 cut(s)	2035
BssMI	GATC	7 cut(s)	326, 624, 1017, 1121, 1473, 1527, 1721
BssT1I	CCWWGG	1 cut(s)	1200
Bst2UI	CCWGG	5 cut(s)	547, 685, 746, 985, 1163
Bst4CI	ACNGT	4 cut(s)	952, 1354, 1638, 1943
Bst6I	CTCTTC	2 cut(s)	1551, 1741
BstBAI	YACGTR	1 cut(s)	1644
BstBI	TTCGAA	1 cut(s)	2109
BstC8I	GCNNGC	8 cut(s)	416, 1240, 1502, 1689, 1709, 1713, 1929, 2037
BstDEI	CTNAG	6 cut(s)	611, 1409, 1442, 1831, 1923, 2055
BstDSI	CCRYGG	4 cut(s)	951, 1506, 1791, 1942
BstEII	GGTNACC	1 cut(s)	946
BstENI	CCTNNNNNAGG	1 cut(s)	1078
BstF5I	GGATG	5 cut(s)	167, 1107, 1173, 1338, 1752
BstH2I	RGCGCY	6 cut(s)	684, 842, 935, 969, 1297, 1839
BstKTI	GATC	7 cut(s)	329, 627, 1020, 1124, 1476, 1530, 1724
BstMAI	GTCTC	4 cut(s)	609, 851, 1361, 1644
BstMBI	GATC	7 cut(s)	326, 624, 1017, 1121, 1473, 1527, 1721
BstMCI	CGRYCG	3 cut(s)	1117, 1308, 1724
BstNI	CCWGG	5 cut(s)	547, 685, 746, 985, 1163
BstPAI	GACNNNNGTC	1 cut(s)	953
BstPI	GGTNACC	1 cut(s)	946
BstSLI	GKGCMC	2 cut(s)	1693, 1992
BstV2I	GAAGAC	1 cut(s)	310
BstZI	CGGCCG	1 cut(s)	1114
BtgI	CCRYGG	4 cut(s)	951, 1506, 1791, 1942
BtgZI	GCGATG	1 cut(s)	1637
BtrI	CACGTC	3 cut(s)	33, 1429, 1777
BtsCI	GGATG	5 cut(s)	167, 1107, 1173, 1338, 1752
BtsIMutI	CAGTG	1 cut(s)	1494
BtuMI	TCGCGA	1 cut(s)	925
Cac8I	GCNNGC	8 cut(s)	416, 1240, 1502, 1689, 1709, 1713, 1929, 2037
Cfr10I	RCCGGY	4 cut(s)	193, 1454, 1500, 1806
Cfr13I	GGNCC	7 cut(s)	21, 1503, 1605, 1638, 1689, 1690, 1966
Csp6I	GTAC	4 cut(s)	441, 1634, 1645, 1700
CspAI	ACCGGT	1 cut(s)	1454
CviAII	CATG	4 cut(s)	500, 520, 664, 2080
CviQI	GTAC	4 cut(s)	441, 1634, 1645, 1700
DdeI	CTNAG	6 cut(s)	611, 1409, 1442, 1831, 1923, 2055
DinI	GGCGCC	3 cut(s)	682, 933, 1837
DpnI	GATC	7 cut(s)	328, 626, 1019, 1123, 1475, 1529, 1723
DpnII	GATC	7 cut(s)	326, 624, 1017, 1121, 1473, 1527, 1721
DrdI	GACNNNNNNGTC	2 cut(s)	919, 1343
DriI	GACNNNNNGTC	1 cut(s)	1657
DseDI	GACNNNNNNGTC	2 cut(s)	919, 1343
EaeI	YGGCCR	6 cut(s)	444, 1114, 1159, 1197, 1498, 1794
EagI	CGGCCG	1 cut(s)	1114
Eam1104I	CTCTTC	2 cut(s)	1551, 1741
Eam1105I	GACNNNNNGTC	1 cut(s)	1657
EarI	CTCTTC	2 cut(s)	1551, 1741
EciI	GGCGGA	4 cut(s)	374, 1270, 1910, 1946
Ecl136II	GAGCTC	3 cut(s)	1669, 1865, 1884
EclXI	CGGCCG	1 cut(s)	1114
Eco130I	CCWWGG	1 cut(s)	1200
Eco24I	GRGCYC	5 cut(s)	660, 1671, 1693, 1867, 1886
Eco31I	GGTCTC	1 cut(s)	1644
Eco47I	GGWCC	2 cut(s)	1605, 1638
Eco47III	AGCGCT	1 cut(s)	1295
Eco52I	CGGCCG	1 cut(s)	1114
Eco53kI	GAGCTC	3 cut(s)	1669, 1865, 1884
Eco88I	CYCGRG	2 cut(s)	1785, 1860
Eco91I	GGTNACC	1 cut(s)	946
EcoICRI	GAGCTC	3 cut(s)	1669, 1865, 1884
EcoNI	CCTNNNNNAGG	1 cut(s)	1078
EcoO109I	RGGNCCY	3 cut(s)	21, 1605, 1690
EcoO65I	GGTNACC	1 cut(s)	946
EcoRII	CCWGG	5 cut(s)	545, 683, 744, 983, 1161
EcoT14I	CCWWGG	1 cut(s)	1200
EcoT38I	GRGCYC	5 cut(s)	660, 1671, 1693, 1867, 1886
EgeI	GGCGCC	3 cut(s)	682, 933, 1837
EheI	GGCGCC	3 cut(s)	682, 933, 1837
ErhI	CCWWGG	1 cut(s)	1200
Esp3I	CGTCTC	1 cut(s)	609
FaeI	CATG	4 cut(s)	503, 523, 667, 2083
FaiI	YATR	6 cut(s)	501, 521, 665, 1247, 2066, 2081
FaqI	GGGAC	3 cut(s)	263, 1571, 1591
FatI	CATG	4 cut(s)	499, 519, 663, 2079
FauI	CCCGC	2 cut(s)	1595, 1680
FbaI	TGATCA	1 cut(s)	1017
FblI	GTMKAC	4 cut(s)	200, 642, 957, 1140
FokI	GGATG	5 cut(s)	154, 1114, 1180, 1325, 1739
FriOI	GRGCYC	5 cut(s)	660, 1671, 1693, 1867, 1886
FseI	GGCCGGCC	1 cut(s)	1504
FspBI	CTAG	1 cut(s)	1239
GsaI	CCCAGC	1 cut(s)	193
GsuI	CTGGAG	2 cut(s)	1421, 1859
HaeII	RGCGCY	6 cut(s)	684, 842, 935, 969, 1297, 1839
Hin1II	CATG	4 cut(s)	503, 523, 667, 2083
HincII	GTYRAC	4 cut(s)	201, 958, 1141, 1177
HindII	GTYRAC	4 cut(s)	201, 958, 1141, 1177
HphI	GGTGA	5 cut(s)	16, 121, 445, 958, 1432
Hpy166II	GTNNAC	8 cut(s)	201, 643, 958, 1071, 1141, 1177, 1348, 1641
Hpy188I	TCNGA	8 cut(s)	614, 709, 1036, 1134, 1258, 1290, 1358, 1721
Hpy188III	TCNNGA	7 cut(s)	622, 701, 764, 856, 874, 924, 1189
Hpy8I	GTNNAC	8 cut(s)	201, 643, 958, 1071, 1141, 1177, 1348, 1641
HpyCH4III	ACNGT	4 cut(s)	952, 1354, 1638, 1943
HpyCH4IV	ACGT	9 cut(s)	32, 276, 618, 914, 960, 1106, 1428, 1643, 1776
HpyCH4V	TGCA	6 cut(s)	30, 268, 273, 418, 1210, 1939
HpyF3I	CTNAG	6 cut(s)	611, 1409, 1442, 1831, 1923, 2055
HpySE526I	ACGT	9 cut(s)	32, 276, 618, 914, 960, 1106, 1428, 1643, 1776
Hsp92II	CATG	4 cut(s)	503, 523, 667, 2083
KasI	GGCGCC	3 cut(s)	680, 931, 1835
KflI	GGGWCCC	1 cut(s)	1605
Kpn2I	TCCGGA	1 cut(s)	700
KroI	GCCGGC	1 cut(s)	1500
KroNI	GCCGGC	1 cut(s)	1502
Ksp22I	TGATCA	1 cut(s)	1017
Kzo9I	GATC	7 cut(s)	326, 624, 1017, 1121, 1473, 1527, 1721
LguI	GCTCTTC	1 cut(s)	1551
LweI	GCATC	1 cut(s)	392
MaeI	CTAG	1 cut(s)	1239
MaeII	ACGT	9 cut(s)	32, 276, 618, 914, 960, 1106, 1428, 1643, 1776
MaeIII	GTNAC	6 cut(s)	4, 64, 946, 1092, 1450, 1777
MalI	GATC	7 cut(s)	328, 626, 1019, 1123, 1475, 1529, 1723
MbiI	CCGCTC	1 cut(s)	1687
MboI	GATC	7 cut(s)	326, 624, 1017, 1121, 1473, 1527, 1721
MboII	GAAGA	7 cut(s)	139, 147, 234, 310, 1017, 1568, 1728
MhlI	GDGCHC	7 cut(s)	467, 660, 1671, 1693, 1867, 1886, 1992
MluCI	AATT	3 cut(s)	137, 238, 1594
MluI	ACGCGT	1 cut(s)	1380
Mly113I	GGCGCC	3 cut(s)	681, 932, 1836
MlyI	GAGTC	5 cut(s)	196, 324, 596, 713, 2097
MmeI	TCCRAC	7 cut(s)	354, 732, 1059, 1112, 1336, 1767, 1780
MroI	TCCGGA	1 cut(s)	700
MroNI	GCCGGC	1 cut(s)	1500
MseI	TTAA	1 cut(s)	1361
MslI	CAYNNNNRTG	1 cut(s)	1959
MspA1I	CMGCKG	2 cut(s)	216, 2014
MvaI	CCWGG	5 cut(s)	547, 685, 746, 985, 1163
NaeI	GCCGGC	1 cut(s)	1502
NarI	GGCGCC	3 cut(s)	681, 932, 1836
NciI	CCSGG	5 cut(s)	787, 1113, 1220, 1304, 1589
NdeII	GATC	7 cut(s)	326, 624, 1017, 1121, 1473, 1527, 1721
NgoMIV	GCCGGC	1 cut(s)	1500
NheI	GCTAGC	1 cut(s)	1238
NlaIII	CATG	4 cut(s)	503, 523, 667, 2083
NlaIV	GGNNCC	9 cut(s)	682, 933, 1229, 1519, 1606, 1607, 1691, 1837, 2010
NmeAIII	GCCGAG	6 cut(s)	484, 1495, 1515, 1865, 2006, 2068
NmuCI	GTSAC	3 cut(s)	4, 946, 1777
NruI	TCGCGA	1 cut(s)	925
NspV	TTCGAA	1 cut(s)	2109
OliI	CACNNNNGTG	1 cut(s)	1959
PaeR7I	CTCGAG	2 cut(s)	1785, 1860
PalAI	GGCGCGCC	1 cut(s)	2035
PauI	GCGCGC	1 cut(s)	2035
PciSI	GCTCTTC	1 cut(s)	1551
PcsI	WCGNNNNNNNCGW	3 cut(s)	1341, 1362, 1392
PdiI	GCCGGC	1 cut(s)	1502
PfeI	GAWTC	5 cut(s)	408, 790, 824, 988, 1799
Pfl23II	CGTACG	1 cut(s)	1633
PflFI	GACNNNGTC	1 cut(s)	916
PflMI	CCANNNNNTGG	1 cut(s)	1963
PfoI	TCCNGGA	1 cut(s)	785
PinAI	ACCGGT	1 cut(s)	1454
Ple19I	CGATCG	1 cut(s)	1724
PleI	GAGTC	5 cut(s)	196, 323, 596, 712, 2096
PluTI	GGCGCC	3 cut(s)	684, 935, 1839
PpsI	GAGTC	5 cut(s)	196, 323, 596, 712, 2096
Ppu21I	YACGTR	1 cut(s)	1644
PpuMI	RGGWCCY	1 cut(s)	1605
PshAI	GACNNNNGTC	1 cut(s)	953
Psp124BI	GAGCTC	3 cut(s)	1671, 1867, 1886
Psp5II	RGGWCCY	1 cut(s)	1605
Psp6I	CCWGG	5 cut(s)	545, 683, 744, 983, 1161
PspEI	GGTNACC	1 cut(s)	946
PspFI	CCCAGC	1 cut(s)	189
PspGI	CCWGG	5 cut(s)	545, 683, 744, 983, 1161
PspLI	CGTACG	1 cut(s)	1633
PspN4I	GGNNCC	9 cut(s)	682, 933, 1229, 1519, 1606, 1607, 1691, 1837, 2010
PspOMI	GGGCCC	1 cut(s)	1689
PspPI	GGNCC	7 cut(s)	21, 1503, 1605, 1638, 1689, 1690, 1966
PspPPI	RGGWCCY	1 cut(s)	1605
PspXI	VCTCGAGB	2 cut(s)	1785, 1860
PsyI	GACNNNGTC	1 cut(s)	916
PteI	GCGCGC	1 cut(s)	2035
PvuI	CGATCG	1 cut(s)	1724
RigI	GGCCGGCC	1 cut(s)	1504
RruI	TCGCGA	1 cut(s)	925
RsaI	GTAC	4 cut(s)	442, 1635, 1646, 1701
RsaNI	GTAC	4 cut(s)	441, 1634, 1645, 1700
RseI	CAYNNNNRTG	1 cut(s)	1959
SacI	GAGCTC	3 cut(s)	1671, 1867, 1886
SalI	GTCGAC	3 cut(s)	199, 956, 1139
SapI	GCTCTTC	1 cut(s)	1551
SaqAI	TTAA	1 cut(s)	1361
Sau3AI	GATC	7 cut(s)	326, 624, 1017, 1121, 1473, 1527, 1721
Sau96I	GGNCC	7 cut(s)	21, 1503, 1605, 1638, 1689, 1690, 1966
SchI	GAGTC	5 cut(s)	196, 324, 596, 713, 2097
SduI	GDGCHC	7 cut(s)	467, 660, 1671, 1693, 1867, 1886, 1992
SfaNI	GCATC	1 cut(s)	392
SfoI	GGCGCC	3 cut(s)	682, 933, 1837
Sfr274I	CTCGAG	2 cut(s)	1785, 1860
SfuI	TTCGAA	1 cut(s)	2109
SgsI	GGCGCGCC	1 cut(s)	2035
SinI	GGWCC	2 cut(s)	1605, 1638
SlaI	CTCGAG	2 cut(s)	1785, 1860
SmiMI	CAYNNNNRTG	1 cut(s)	1959
SmlI	CTYRAG	4 cut(s)	634, 1187, 1785, 1860
SmoI	CTYRAG	4 cut(s)	634, 1187, 1785, 1860
Sse9I	AATT	3 cut(s)	137, 238, 1594
SspDI	GGCGCC	3 cut(s)	680, 931, 1835
SspMI	CTAG	1 cut(s)	1239
SstI	GAGCTC	3 cut(s)	1671, 1867, 1886
StyI	CCWWGG	1 cut(s)	1200
TaaI	ACNGT	4 cut(s)	952, 1354, 1638, 1943
TaiI	ACGT	9 cut(s)	35, 279, 621, 917, 963, 1109, 1431, 1646, 1779
TaqII	GACCGA	1 cut(s)	317
TasI	AATT	3 cut(s)	137, 238, 1594
TfiI	GAWTC	5 cut(s)	408, 790, 824, 988, 1799
Tru1I	TTAA	1 cut(s)	1361
Tru9I	TTAA	1 cut(s)	1361
TscAI	CASTG	1 cut(s)	1501
TseFI	GTSAC	3 cut(s)	4, 946, 1777
Tsp45I	GTSAC	3 cut(s)	4, 946, 1777
TspDTI	ATGAA	1 cut(s)	2096
TspGWI	ACGGA	3 cut(s)	83, 1111, 1621
TspRI	CASTG	1 cut(s)	1501
Tth111I	GACNNNGTC	1 cut(s)	916
Van91I	CCANNNNNTGG	1 cut(s)	1963
VpaK11BI	GGWCC	2 cut(s)	1605, 1638
XagI	CCTNNNNNAGG	1 cut(s)	1078
XapI	RAATTY	1 cut(s)	137
XhoI	CTCGAG	2 cut(s)	1785, 1860
XmiI	GTMKAC	4 cut(s)	200, 642, 957, 1140
XspI	CTAG	1 cut(s)	1239
ZraI	GACGTC	4 cut(s)	619, 915, 961, 1107

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.