Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0011222

Physical Location & Seq

Genomic Coordinates Reverse (-)

21172595 .. 21175769

Gene Structure 3175 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ48362

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2154 bp

ATGGTGACTGGGTGGAGAAGGGCCTTCTGCACGTCTATCCCTAAAGACAGACACACCAAAGTTGTAACAGAGAAGCAGCAGCAACAATGTGAAAACACCAACACCAACACCAACAATAACCAAAGCCCCAAAATCACCTCCAAATTCGGTTTCTTCTCCTCCTCCTCAAACCCATCCACGCCTCGCCTTCAATCCCAGCCGGTGTCGACTCCAAGCCTCCGCTGCCGAACCACCACCGCCGCCACAGCACCCACCACCCCCAATTCTTCCCTCCCCAACAGCCCAAAACTGCAATGCAACGTCCCTGCCACCACCACAACCCCGAAAAAAATGACCTACAGCCCCAGAGTCTTCCACCGATCCAACCCCTCCTCCCCGAAATCGCCTTCCAGCTTCTCCCTCCTCAAATCCACCCTCCGCCTCAACAAAAGTAGATGCGGAATCTGCTTGCAGAGCGTGAAAAGTGGTCAAGGTACGGCCATTTTCACAGCCGAGTGCTCCCACTCCTTTCACTTTCCTTGCGTCGCCACCCATGTCAAGCAGCAACCTCTCATGCTCTGCCCAGTCTGCCACGCCACCTGGAAAGAGCTGCCTCTGCTCGAAACTCTCACTCCTCGCACCAATACTAATCCCCAGTCGAAGCTCAGAGACGTCAAGATCAAGCCCTTGAGGGTTTACAACGACGACGAGCCGCTCATGTCGCCCACCTCCGGCGCCAGGTTCAATCCCATTCCGGAGTCCGACGAAAACGAGGACGAAAACGATGCCGTTGAGTTCCAGGGCTTCTTTGTCAATCCTGATAGGAATAATGTCTGTTCCGGGAATCGCAAGAGTGTGGAGTTTAGTTTGCTGCCTGAATCGGCGGTGGTGGCGCTTGGGAGGAGCTTCGAGACTTACGCCGTCGTCTTGAAAGTCAAAGCTCCGCAGCTTGTGGAAGGTAGAGCGACGTCGTCGTCGCGAAGGGCGCCGATTGACTTGGTGACCGTGGTCGACGTCAGCGCCAATACCAGCCGCGCCAGGATTCAGGCCACCAAGCGCGCGTTACGGTTGATAATTTCTTCTCTCTCCGACGCCGACAGGCTCTCCATCGTGGCGTTCTCGTCCACCTCCAAGAGGCTGCTGCCGTTACGGAGGATGACGTCGCCCGGCCGGAGATCGGCGCGTCGGATAGTTGACGCGCTCTGCGGCGTTGGCCAGGGTATGTGTGTCAACGACGCGCTCAAGAAGGCGGCCAAGGTGTTGCAAGACCGCCGGGAGAGAAACCCTGTCGCTAGCATTATGCTCCTCTCGGACGGCGGCGGCGTTTCCGCCAATCAGAAGCGCTCCTCCCCGGTCGTGTCCTCCACGCGCTTCCCCCACCTCGACATCCCCGTCCACACCGTCGGATTAACCGAGACTACCGACGACGCGTTCGCCAAGTGCGTGGGGGGTTTGCTAAGCGTGGTGGTGAAAGACGTCAAGCTCCAGCTCAGCGTCGTAACCGGTTCAGCCAACGCCGAGATCGGGGCGGTTTATTCTCTCACGGGCCGGCCCACGGCTCTCGGATCCGGTTCGATCCGGCTCGGCGACCTCTACGCCGGAGAAGAGCGAGAGCTGCTCGTCGAATTGAAAGTCCCGGTCAATTCCGGCGGGTCCCACACCCAAAACGCGATGATGTCCGTACGGTCCACCTACAGAGACCCGTCGTCGAATGAGCTCGTATTTTCCAAAGAGCGGGCCCTCCTCGTACCGCGCTCGCAAGCCGTCCGATCGCCTTCTACCTCTTCCTCCAACCCCAACATCCAACGGCTGCGAAATCTCCACGTCACGGCTCGAGCCGTGGCCGAATCGCGCCGGTTCTTGGAGCGAAACGACTTCTCAGGCGCCCATCACTTGCTGACTTCGGCTCGAGCTCTGCTGCTCCAGTCGAGCTCGGCTTCGGCGGAGGAGTTCCTGCGCGGCTTGGAGGCTGAGCTGGCGGAGCTGCACCGTGGAAGGCAGCACCAGAGTGTGGCCCAGAGGCAGAGAGGGAACTGGCACTTGGAGGAGAAGCCGGAGCCGCTGACGCCGACCTCGGCTTGGCGCGCCGCCGAGAGATTGGCTAAGGTGGCTATAATGAGGAAGTCCATGAACAGAGTCAGCGACTTACACGGCTTCGAAAACGCCAGATTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000741 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006807 GO:0006996 GO:0006997 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009553 GO:0009559 GO:0009561 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009987 GO:0010197 GO:0016020 GO:0016043 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0022622 GO:0030054 GO:0030154 GO:0032446 GO:0032501 GO:0032502 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048229 GO:0048284 GO:0048364 GO:0048731 GO:0048856 GO:0048869 GO:0050896 GO:0055044 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0071840 GO:0071944 GO:0099402 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

VWA VWA_2 VWA_3 zf-RING_11

Protein Analysis

717

Amino Acids

78.48

Weight (kDa)

10.06

Isoelectric Point (pI)

52.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	145 - 190	4.6e-07	Ring finger domain
zf-RING_11	PF17123	146 - 175	1.5e-08	RING-like zinc finger
VWA_3	PF13768	325 - 469	3.7e-12	von Willebrand factor type A domain
VWA	PF00092	325 - 470	4e-12	von Willebrand factor type A domain
VWA_2	PF13519	326 - 432	1.1e-15	von Willebrand factor type A domain
WAV3_C	PF25243	592 - 665	4.8e-35	E3 ubiquitin-protein ligase WAV3-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011222)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22680 AT4G37890 AT4G37890
fragaria_vesca	FvH4_1g18891
malus_domestica	MD01G1045900.v1.1 MD15G1305700.v1.1
prunus_persica	Prupe.6G210600_v2.0.a1
pyrus_communis	pycom01g07210 pycom15g26960
rosa_chinensis	RchiOBHm_Chr2g0109851
rosa_laevigata	RLG00000017767
rosa_multiflora	Rmu_co8072298.1_g000001 Rmu_co8290675.1_g000001 Rmu_sc0008299.1_g000001
rosa_roxburghii	Rroxscaffold_2G00133910
rosa_samantha	Rh2AG215300 Rh2BG225400 Rh2CG217200 Rh2DG220800
rosa_wichuraiana	Rw2G016630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	952, 1370
AatII	GACGTC	5 cut(s)	654, 950, 996, 1142, 1458
AccB1I	GGYRCC	3 cut(s)	713, 964, 1862
AccB7I	CCANNNNNTGG	1 cut(s)	1990
AccBSI	CCGCTC	2 cut(s)	694, 1714
AccI	GTMKAC	2 cut(s)	206, 990
AccIII	TCCGGA	1 cut(s)	733
AclWI	GGATC	4 cut(s)	354, 1539, 1549, 1552
AcoI	YGGCCR	5 cut(s)	477, 1147, 1192, 1230, 1821
AcsI	RAATTY	1 cut(s)	143
AfaI	GTAC	3 cut(s)	475, 1662, 1728
AfeI	AGCGCT	1 cut(s)	1322
AflIII	ACRYGT	1 cut(s)	1407
AgeI	ACCGGT	1 cut(s)	1481
AgsI	TTSAA	4 cut(s)	191, 724, 910, 1609
AhdI	GACNNNNNGTC	1 cut(s)	1684
AjiI	CACGTC	2 cut(s)	33, 1804
AjnI	CCWGG	5 cut(s)	578, 716, 777, 1016, 1194
AjuI	GAANNNNNNNTTGG	4 cut(s)	134, 166, 2003, 2035
AleI	CACNNNNGTG	1 cut(s)	1986
Alw21I	GWGCWC	4 cut(s)	500, 1698, 1894, 1913
Alw26I	GTCTC	4 cut(s)	642, 884, 1388, 1671
AlwI	GGATC	4 cut(s)	354, 1539, 1549, 1552
Ama87I	CYCGRG	2 cut(s)	1812, 1887
Aor13HI	TCCGGA	1 cut(s)	733
Aor51HI	AGCGCT	1 cut(s)	1322
ApaI	GGGCCC	1 cut(s)	1720
ApoI	RAATTY	1 cut(s)	143
ArsI	GACNNNNNNTTYG	4 cut(s)	1394, 1426, 1596, 1628
AscI	GGCGCGCC	1 cut(s)	2062
AsiGI	ACCGGT	1 cut(s)	1481
AspS9I	GGNCC	8 cut(s)	21, 1525, 1530, 1632, 1665, 1716, 1717, 1993
AsuC2I	CCSGG	5 cut(s)	820, 1146, 1253, 1331, 1616
AsuHPI	GGTGA	4 cut(s)	16, 127, 991, 1459
AsuII	TTCGAA	1 cut(s)	2136
AsuNHI	GCTAGC	1 cut(s)	1271
AvaI	CYCGRG	2 cut(s)	1812, 1887
AvaII	GGWCC	2 cut(s)	1632, 1665
BaeGI	GKGCMC	1 cut(s)	1720
BalI	TGGCCA	1 cut(s)	1194
BamHI	GGATCC	1 cut(s)	1544
BanI	GGYRCC	3 cut(s)	713, 964, 1862
BanII	GRGCYC	4 cut(s)	1698, 1720, 1894, 1913
BbsI	GAAGAC	1 cut(s)	343
Bbv12I	GWGCWC	4 cut(s)	500, 1698, 1894, 1913
BccI	CCATC	3 cut(s)	181, 1094, 1875
BcgI	CGANNNNNNTGC	2 cut(s)	746, 780
BciT130I	CCWGG	5 cut(s)	580, 718, 779, 1018, 1196
BcnI	CCSGG	5 cut(s)	820, 1146, 1253, 1331, 1616
BcoDI	GTCTC	4 cut(s)	642, 884, 1388, 1671
BfaI	CTAG	1 cut(s)	1272
BfmI	CTRYAG	2 cut(s)	337, 1672
BfoI	RGCGCY	6 cut(s)	717, 875, 968, 1002, 1324, 1866
BlpI	GCTNAGC	3 cut(s)	1436, 1469, 1950
Bme18I	GGWCC	2 cut(s)	1632, 1665
BmeRI	GACNNNNNGTC	1 cut(s)	1684
BmeT110I	CYCGRG	2 cut(s)	1812, 1887
BmgBI	CACGTC	2 cut(s)	33, 1804
BmgT120I	GGNCC	8 cut(s)	21, 1525, 1530, 1632, 1665, 1716, 1717, 1993
BmiI	GGNNCC	8 cut(s)	715, 966, 1546, 1633, 1634, 1718, 1864, 2037
BmrI	ACTGGG	3 cut(s)	18, 557, 628
BmsI	GCATC	2 cut(s)	425, 754
BmtI	GCTAGC	1 cut(s)	1275
BmuI	ACTGGG	3 cut(s)	18, 557, 628
BoxI	GACNNNNGTC	1 cut(s)	986
BpiI	GAAGAC	1 cut(s)	343
BplI	GAGNNNNNCTC	2 cut(s)	1581, 1613
BpmI	CTGGAG	2 cut(s)	1448, 1886
Bpu10I	CCTNAGC	1 cut(s)	2082
Bpu1102I	GCTNAGC	3 cut(s)	1436, 1469, 1950
Bpu14I	TTCGAA	1 cut(s)	2136
BpuEI	CTTGAG	2 cut(s)	688, 1205
BpuMI	CCSGG	5 cut(s)	820, 1146, 1253, 1331, 1616
BsaI	GGTCTC	1 cut(s)	1671
BsaJI	CCNNGG	9 cut(s)	778, 984, 1195, 1233, 1329, 1533, 1818, 1969, 2052
BsaWI	WCCGGW	3 cut(s)	733, 1481, 1547
BsaXI	ACNNNNNCTCC	6 cut(s)	356, 386, 595, 625, 1067, 1097
Bse118I	RCCGGY	4 cut(s)	199, 1481, 1527, 1833
Bse1I	ACTGG	5 cut(s)	13, 563, 634, 1903, 2018
Bse3DI	GCAATG	1 cut(s)	299
BseAI	TCCGGA	1 cut(s)	733
BseBI	CCWGG	5 cut(s)	580, 718, 779, 1018, 1196
BseDI	CCNNGG	9 cut(s)	778, 984, 1195, 1233, 1329, 1533, 1818, 1969, 2052
BseGI	GGATG	4 cut(s)	173, 1140, 1365, 1779
BseMI	GCAATG	1 cut(s)	299
BseMII	CTCAG	4 cut(s)	658, 1483, 1872, 1941
BseNI	ACTGG	5 cut(s)	13, 563, 634, 1903, 2018
BsePI	GCGCGC	2 cut(s)	1036, 2062
BseSI	GKGCMC	1 cut(s)	1720
BseX3I	CGGCCG	1 cut(s)	1147
BseYI	CCCAGC	1 cut(s)	195
BsgI	GTGCAG	2 cut(s)	13, 1949
Bsh1285I	CGRYCG	3 cut(s)	1150, 1335, 1751
BshNI	GGYRCC	3 cut(s)	713, 964, 1862
BshTI	ACCGGT	1 cut(s)	1481
BsiEI	CGRYCG	3 cut(s)	1150, 1335, 1751
BsiHKAI	GWGCWC	4 cut(s)	500, 1698, 1894, 1913
BsiHKCI	CYCGRG	2 cut(s)	1812, 1887
BsiWI	CGTACG	1 cut(s)	1660
BslFI	GGGAC	3 cut(s)	287, 1598, 1618
BsmAI	GTCTC	4 cut(s)	642, 884, 1388, 1671
BsmBI	CGTCTC	1 cut(s)	642
BsmFI	GGGAC	3 cut(s)	287, 1598, 1618
Bso31I	GGTCTC	1 cut(s)	1671
BsoBI	CYCGRG	2 cut(s)	1812, 1887
Bsp119I	TTCGAA	1 cut(s)	2136
Bsp120I	GGGCCC	1 cut(s)	1716
Bsp1286I	GDGCHC	5 cut(s)	500, 1698, 1720, 1894, 1913
Bsp13I	TCCGGA	1 cut(s)	733
Bsp143I	GATC	7 cut(s)	359, 657, 1154, 1500, 1544, 1554, 1748
Bsp1720I	GCTNAGC	3 cut(s)	1436, 1469, 1950
Bsp68I	TCGCGA	1 cut(s)	958
BspCNI	CTCAG	4 cut(s)	657, 1482, 1871, 1942
BspEI	TCCGGA	1 cut(s)	733
BspLI	GGNNCC	8 cut(s)	715, 966, 1546, 1633, 1634, 1718, 1864, 2037
BspOI	GCTAGC	1 cut(s)	1275
BspPI	GGATC	4 cut(s)	354, 1539, 1549, 1552
BspQI	GCTCTTC	1 cut(s)	1578
BspT104I	TTCGAA	1 cut(s)	2136
BspT107I	GGYRCC	3 cut(s)	713, 964, 1862
BspTNI	GGTCTC	1 cut(s)	1671
BsrBI	CCGCTC	2 cut(s)	694, 1714
BsrDI	GCAATG	1 cut(s)	299
BsrFI	RCCGGY	4 cut(s)	199, 1481, 1527, 1833
BsrI	ACTGG	5 cut(s)	13, 563, 634, 1903, 2018
BssAI	RCCGGY	4 cut(s)	199, 1481, 1527, 1833
BssECI	CCNNGG	9 cut(s)	778, 984, 1195, 1233, 1329, 1533, 1818, 1969, 2052
BssHII	GCGCGC	2 cut(s)	1036, 2062
BssMI	GATC	7 cut(s)	359, 657, 1154, 1500, 1544, 1554, 1748
BssT1I	CCWWGG	1 cut(s)	1233
Bst2UI	CCWGG	5 cut(s)	580, 718, 779, 1018, 1196
Bst4CI	ACNGT	5 cut(s)	985, 1047, 1381, 1665, 1970
Bst6I	CTCTTC	2 cut(s)	1578, 1768
BstBI	TTCGAA	1 cut(s)	2136
BstC8I	GCNNGC	9 cut(s)	449, 1038, 1273, 1529, 1716, 1736, 1740, 1956, 2064
BstDEI	CTNAG	6 cut(s)	644, 1436, 1469, 1858, 1950, 2082
BstDSI	CCRYGG	4 cut(s)	984, 1533, 1818, 1969
BstEII	GGTNACC	1 cut(s)	979
BstENI	CCTNNNNNAGG	1 cut(s)	1111
BstF5I	GGATG	4 cut(s)	173, 1140, 1365, 1779
BstH2I	RGCGCY	6 cut(s)	717, 875, 968, 1002, 1324, 1866
BstKTI	GATC	7 cut(s)	362, 660, 1157, 1503, 1547, 1557, 1751
BstMAI	GTCTC	4 cut(s)	642, 884, 1388, 1671
BstMBI	GATC	7 cut(s)	359, 657, 1154, 1500, 1544, 1554, 1748
BstMCI	CGRYCG	3 cut(s)	1150, 1335, 1751
BstNI	CCWGG	5 cut(s)	580, 718, 779, 1018, 1196
BstPAI	GACNNNNGTC	1 cut(s)	986
BstPI	GGTNACC	1 cut(s)	979
BstSFI	CTRYAG	2 cut(s)	337, 1672
BstSLI	GKGCMC	1 cut(s)	1720
BstV2I	GAAGAC	1 cut(s)	343
BstX2I	RGATCY	1 cut(s)	1544
BstXI	CCANNNNNNTGG	1 cut(s)	1423
BstYI	RGATCY	1 cut(s)	1544
BstZI	CGGCCG	1 cut(s)	1147
BtgI	CCRYGG	4 cut(s)	984, 1533, 1818, 1969
BtgZI	GCGATG	1 cut(s)	1664
BtrI	CACGTC	2 cut(s)	33, 1804
BtsCI	GGATG	4 cut(s)	173, 1140, 1365, 1779
BtuMI	TCGCGA	1 cut(s)	958
Cac8I	GCNNGC	9 cut(s)	449, 1038, 1273, 1529, 1716, 1736, 1740, 1956, 2064
Cfr10I	RCCGGY	4 cut(s)	199, 1481, 1527, 1833
Cfr13I	GGNCC	8 cut(s)	21, 1525, 1530, 1632, 1665, 1716, 1717, 1993
CseI	GACGC	8 cut(s)	511, 1079, 1151, 1184, 1223, 1415, 1462, 2053
Csp6I	GTAC	3 cut(s)	474, 1661, 1727
CspAI	ACCGGT	1 cut(s)	1481
CviAII	CATG	4 cut(s)	533, 553, 697, 2107
CviQI	GTAC	3 cut(s)	474, 1661, 1727
DdeI	CTNAG	6 cut(s)	644, 1436, 1469, 1858, 1950, 2082
DinI	GGCGCC	3 cut(s)	715, 966, 1864
DpnI	GATC	7 cut(s)	361, 659, 1156, 1502, 1546, 1556, 1750
DpnII	GATC	7 cut(s)	359, 657, 1154, 1500, 1544, 1554, 1748
DrdI	GACNNNNNNGTC	2 cut(s)	952, 1370
DriI	GACNNNNNGTC	1 cut(s)	1684
DseDI	GACNNNNNNGTC	2 cut(s)	952, 1370
EaeI	YGGCCR	5 cut(s)	477, 1147, 1192, 1230, 1821
EagI	CGGCCG	1 cut(s)	1147
Eam1104I	CTCTTC	2 cut(s)	1578, 1768
Eam1105I	GACNNNNNGTC	1 cut(s)	1684
EarI	CTCTTC	2 cut(s)	1578, 1768
EciI	GGCGGA	4 cut(s)	407, 1297, 1937, 1973
Ecl136II	GAGCTC	3 cut(s)	1696, 1892, 1911
EclXI	CGGCCG	1 cut(s)	1147
Eco130I	CCWWGG	1 cut(s)	1233
Eco24I	GRGCYC	4 cut(s)	1698, 1720, 1894, 1913
Eco31I	GGTCTC	1 cut(s)	1671
Eco47I	GGWCC	2 cut(s)	1632, 1665
Eco47III	AGCGCT	1 cut(s)	1322
Eco52I	CGGCCG	1 cut(s)	1147
Eco53kI	GAGCTC	3 cut(s)	1696, 1892, 1911
Eco88I	CYCGRG	2 cut(s)	1812, 1887
Eco91I	GGTNACC	1 cut(s)	979
EcoICRI	GAGCTC	3 cut(s)	1696, 1892, 1911
EcoNI	CCTNNNNNAGG	1 cut(s)	1111
EcoO109I	RGGNCCY	3 cut(s)	21, 1632, 1717
EcoO65I	GGTNACC	1 cut(s)	979
EcoRII	CCWGG	5 cut(s)	578, 716, 777, 1016, 1194
EcoT14I	CCWWGG	1 cut(s)	1233
EcoT38I	GRGCYC	4 cut(s)	1698, 1720, 1894, 1913
EgeI	GGCGCC	3 cut(s)	715, 966, 1864
EheI	GGCGCC	3 cut(s)	715, 966, 1864
ErhI	CCWWGG	1 cut(s)	1233
Esp3I	CGTCTC	1 cut(s)	642
FaeI	CATG	4 cut(s)	536, 556, 700, 2110
FaiI	YATR	7 cut(s)	534, 554, 698, 1202, 1280, 2093, 2108
FaqI	GGGAC	3 cut(s)	287, 1598, 1618
FatI	CATG	4 cut(s)	532, 552, 696, 2106
FauI	CCCGC	2 cut(s)	1622, 1707
FblI	GTMKAC	2 cut(s)	206, 990
FokI	GGATG	4 cut(s)	160, 1147, 1352, 1766
FriOI	GRGCYC	4 cut(s)	1698, 1720, 1894, 1913
FseI	GGCCGGCC	1 cut(s)	1531
FspBI	CTAG	1 cut(s)	1272
GsaI	CCCAGC	1 cut(s)	199
GsuI	CTGGAG	2 cut(s)	1448, 1886
HaeII	RGCGCY	6 cut(s)	717, 875, 968, 1002, 1324, 1866
HgaI	GACGC	8 cut(s)	511, 1079, 1151, 1184, 1223, 1415, 1462, 2053
Hin1II	CATG	4 cut(s)	536, 556, 700, 2110
HincII	GTYRAC	4 cut(s)	207, 991, 1174, 1210
HindII	GTYRAC	4 cut(s)	207, 991, 1174, 1210
HinfI	GANTC	9 cut(s)	208, 348, 441, 737, 823, 857, 1021, 1826, 2115
HphI	GGTGA	4 cut(s)	16, 127, 991, 1459
Hpy166II	GTNNAC	8 cut(s)	207, 676, 991, 1104, 1174, 1210, 1375, 1668
Hpy188I	TCNGA	9 cut(s)	647, 742, 1069, 1167, 1291, 1317, 1385, 1544, 1748
Hpy188III	TCNNGA	7 cut(s)	655, 734, 797, 889, 907, 957, 1222
Hpy8I	GTNNAC	8 cut(s)	207, 676, 991, 1104, 1174, 1210, 1375, 1668
HpyAV	CCTTC	9 cut(s)	12, 34, 197, 396, 929, 954, 1219, 1764, 1968
HpyCH4III	ACNGT	5 cut(s)	985, 1047, 1381, 1665, 1970
HpyCH4IV	ACGT	8 cut(s)	32, 300, 651, 947, 993, 1139, 1455, 1803
HpyCH4V	TGCA	6 cut(s)	30, 292, 297, 451, 1243, 1966
HpyF3I	CTNAG	6 cut(s)	644, 1436, 1469, 1858, 1950, 2082
HpySE526I	ACGT	8 cut(s)	32, 300, 651, 947, 993, 1139, 1455, 1803
Hsp92II	CATG	4 cut(s)	536, 556, 700, 2110
KasI	GGCGCC	3 cut(s)	713, 964, 1862
KflI	GGGWCCC	1 cut(s)	1632
Kpn2I	TCCGGA	1 cut(s)	733
KroI	GCCGGC	1 cut(s)	1527
KroNI	GCCGGC	1 cut(s)	1529
Kzo9I	GATC	7 cut(s)	359, 657, 1154, 1500, 1544, 1554, 1748
LguI	GCTCTTC	1 cut(s)	1578
LweI	GCATC	2 cut(s)	425, 754
MaeI	CTAG	1 cut(s)	1272
MaeII	ACGT	8 cut(s)	32, 300, 651, 947, 993, 1139, 1455, 1803
MaeIII	GTNAC	7 cut(s)	4, 64, 979, 1041, 1125, 1477, 1804
MalI	GATC	7 cut(s)	361, 659, 1156, 1502, 1546, 1556, 1750
MbiI	CCGCTC	2 cut(s)	694, 1714
MboI	GATC	7 cut(s)	359, 657, 1154, 1500, 1544, 1554, 1748
MboII	GAAGA	6 cut(s)	145, 258, 343, 1050, 1595, 1755
MflI	RGATCY	1 cut(s)	1544
MhlI	GDGCHC	5 cut(s)	500, 1698, 1720, 1894, 1913
MlsI	TGGCCA	1 cut(s)	1194
MluCI	AATT	5 cut(s)	143, 262, 1053, 1604, 1621
MluI	ACGCGT	1 cut(s)	1407
MluNI	TGGCCA	1 cut(s)	1194
Mly113I	GGCGCC	3 cut(s)	714, 965, 1863
MlyI	GAGTC	4 cut(s)	202, 357, 746, 2124
MmeI	TCCRAC	7 cut(s)	387, 765, 1092, 1145, 1363, 1794, 1807
Mox20I	TGGCCA	1 cut(s)	1194
MroI	TCCGGA	1 cut(s)	733
MroNI	GCCGGC	1 cut(s)	1527
MscI	TGGCCA	1 cut(s)	1194
MseI	TTAA	1 cut(s)	1388
MslI	CAYNNNNRTG	1 cut(s)	1986
Msp20I	TGGCCA	1 cut(s)	1194
MspA1I	CMGCKG	2 cut(s)	222, 2041
MvaI	CCWGG	5 cut(s)	580, 718, 779, 1018, 1196
NaeI	GCCGGC	1 cut(s)	1529
NarI	GGCGCC	3 cut(s)	714, 965, 1863
NciI	CCSGG	5 cut(s)	820, 1146, 1253, 1331, 1616
NdeII	GATC	7 cut(s)	359, 657, 1154, 1500, 1544, 1554, 1748
NgoMIV	GCCGGC	1 cut(s)	1527
NheI	GCTAGC	1 cut(s)	1271
NlaIII	CATG	4 cut(s)	536, 556, 700, 2110
NlaIV	GGNNCC	8 cut(s)	715, 966, 1546, 1633, 1634, 1718, 1864, 2037
NmeAIII	GCCGAG	6 cut(s)	517, 1522, 1542, 1892, 2033, 2095
NmuCI	GTSAC	3 cut(s)	4, 979, 1804
NruI	TCGCGA	1 cut(s)	958
NspV	TTCGAA	1 cut(s)	2136
OliI	CACNNNNGTG	1 cut(s)	1986
PaeR7I	CTCGAG	2 cut(s)	1812, 1887
PalAI	GGCGCGCC	1 cut(s)	2062
PauI	GCGCGC	2 cut(s)	1036, 2062
PciSI	GCTCTTC	1 cut(s)	1578
PcsI	WCGNNNNNNNCGW	4 cut(s)	1299, 1368, 1389, 1419
PdiI	GCCGGC	1 cut(s)	1529
PfeI	GAWTC	5 cut(s)	441, 823, 857, 1021, 1826
Pfl23II	CGTACG	1 cut(s)	1660
PflFI	GACNNNGTC	1 cut(s)	949
PflMI	CCANNNNNTGG	1 cut(s)	1990
PfoI	TCCNGGA	1 cut(s)	818
PinAI	ACCGGT	1 cut(s)	1481
Ple19I	CGATCG	1 cut(s)	1751
PleI	GAGTC	4 cut(s)	202, 356, 745, 2123
PluTI	GGCGCC	3 cut(s)	717, 968, 1866
PpsI	GAGTC	4 cut(s)	202, 356, 745, 2123
PpuMI	RGGWCCY	1 cut(s)	1632
PshAI	GACNNNNGTC	1 cut(s)	986
Psp124BI	GAGCTC	3 cut(s)	1698, 1894, 1913
Psp5II	RGGWCCY	1 cut(s)	1632
Psp6I	CCWGG	5 cut(s)	578, 716, 777, 1016, 1194
PspEI	GGTNACC	1 cut(s)	979
PspFI	CCCAGC	1 cut(s)	195
PspGI	CCWGG	5 cut(s)	578, 716, 777, 1016, 1194
PspLI	CGTACG	1 cut(s)	1660
PspN4I	GGNNCC	8 cut(s)	715, 966, 1546, 1633, 1634, 1718, 1864, 2037
PspOMI	GGGCCC	1 cut(s)	1716
PspPI	GGNCC	8 cut(s)	21, 1525, 1530, 1632, 1665, 1716, 1717, 1993
PspPPI	RGGWCCY	1 cut(s)	1632
PspXI	VCTCGAGB	2 cut(s)	1812, 1887
PsuI	RGATCY	1 cut(s)	1544
PsyI	GACNNNGTC	1 cut(s)	949
PteI	GCGCGC	2 cut(s)	1036, 2062
PvuI	CGATCG	1 cut(s)	1751
RigI	GGCCGGCC	1 cut(s)	1531
RruI	TCGCGA	1 cut(s)	958
RsaI	GTAC	3 cut(s)	475, 1662, 1728
RsaNI	GTAC	3 cut(s)	474, 1661, 1727
RseI	CAYNNNNRTG	1 cut(s)	1986
SacI	GAGCTC	3 cut(s)	1698, 1894, 1913
SalI	GTCGAC	2 cut(s)	205, 989
SapI	GCTCTTC	1 cut(s)	1578
SaqAI	TTAA	1 cut(s)	1388
Sau3AI	GATC	7 cut(s)	359, 657, 1154, 1500, 1544, 1554, 1748
Sau96I	GGNCC	8 cut(s)	21, 1525, 1530, 1632, 1665, 1716, 1717, 1993
SchI	GAGTC	4 cut(s)	202, 357, 746, 2124
SduI	GDGCHC	5 cut(s)	500, 1698, 1720, 1894, 1913
SfaNI	GCATC	2 cut(s)	425, 754
SfcI	CTRYAG	2 cut(s)	337, 1672
SfoI	GGCGCC	3 cut(s)	715, 966, 1864
Sfr274I	CTCGAG	2 cut(s)	1812, 1887
SfuI	TTCGAA	1 cut(s)	2136
SgsI	GGCGCGCC	1 cut(s)	2062
SinI	GGWCC	2 cut(s)	1632, 1665
SlaI	CTCGAG	2 cut(s)	1812, 1887
SmiMI	CAYNNNNRTG	1 cut(s)	1986
SmlI	CTYRAG	4 cut(s)	667, 1220, 1812, 1887
SmoI	CTYRAG	4 cut(s)	667, 1220, 1812, 1887
Sse9I	AATT	5 cut(s)	143, 262, 1053, 1604, 1621
SspDI	GGCGCC	3 cut(s)	713, 964, 1862
SspMI	CTAG	1 cut(s)	1272
SstI	GAGCTC	3 cut(s)	1698, 1894, 1913
StyI	CCWWGG	1 cut(s)	1233
TaaI	ACNGT	5 cut(s)	985, 1047, 1381, 1665, 1970
TaiI	ACGT	8 cut(s)	35, 303, 654, 950, 996, 1142, 1458, 1806
TasI	AATT	5 cut(s)	143, 262, 1053, 1604, 1621
TfiI	GAWTC	5 cut(s)	441, 823, 857, 1021, 1826
Tru1I	TTAA	1 cut(s)	1388
Tru9I	TTAA	1 cut(s)	1388
TseFI	GTSAC	3 cut(s)	4, 979, 1804
Tsp45I	GTSAC	3 cut(s)	4, 979, 1804
TspDTI	ATGAA	1 cut(s)	2123
TspGWI	ACGGA	2 cut(s)	1144, 1648
Tth111I	GACNNNGTC	1 cut(s)	949
Van91I	CCANNNNNTGG	1 cut(s)	1990
VpaK11BI	GGWCC	2 cut(s)	1632, 1665
XagI	CCTNNNNNAGG	1 cut(s)	1111
XapI	RAATTY	1 cut(s)	143
XhoI	CTCGAG	2 cut(s)	1812, 1887
XmiI	GTMKAC	2 cut(s)	206, 990
XspI	CTAG	1 cut(s)	1272
ZraI	GACGTC	5 cut(s)	652, 948, 994, 1140, 1456

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.