pycom15g28880

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0005393
Physical Location & Seq
Forward (+)
25294480 .. 25299250
4771 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2658 bp
ATGAATAGAACCAGCCGAAAGCGGTCTTCTAAATGGGATTTGGTGGAAGAGCCTCAGTATGAAGATGTAAATATGCAGGACAATGGTTGGATGGGAAAGGCAGGCAGGCCATTTCGTCCTAAGGAATCTGGACGTGACTGGCCTTCTCCAGAGACAAATGATCTGCAGAGACCTAAGCAAGATTTGGATTTGCCTTCCAGGGAACCTTTGCCCGGAAGCAGAGGTTCACATAAGCATGAGAGTACGAATAAGAGATACAATAGATACATGGATGACTCTATGGTGTGGGATGGAGATGAAAATTGCAGCACAAGGATGTCTCCTGGTTTTGATGACTGGAAAGAACATCGTAGTCAGTCCCCAAAAAGTGGTTGGAAAAGGTCACTGAGAGGTAGGAGTAGAAGTAGAAGCAGGAGCTGGAGTAAGAGCCAGAGCTGGAGCAGGAGCCCTGATCATGGCTATAGGCGGGAATCACTTTTCCTCGACAGAAATAGAGGCAGGCCAGGAATTTCAGCTCAATTGTGCAAAGATTATATGACTGGGAGATGCAGGAGAGCTAGTGATTGCCAATTTCTCCATGAAGGTAATTCTAAGTATGATGATAGCTGGGAAAGTCGACACAGGAAACGTGGTGCTTTGAGATATGCTAGTCCTCCTGAAACAACCGAGTACTACCCATTAAAAAGTGAAAGATATTCTGTGTATTGTAGTGATTTTGTAAAAGGGAAGTGCCGCAAGGGTGCCTCTTGCAAGTTCGATCACCATCGTCCTTCTGATGGATTCAGCAAAGGTTCTACAATTGAGAATACGAGAGAAAGGGAAAATGAAAGAAGGAACAGAGATACTTCTATAGAGCGAGGTGCTGAGCGTGTATCACACAGAAGTGGCGATATTCCTTGCAAATTTTTTGCTGCGGGAAATTGTCGAAATAAAAAGTATTGTCGGTTTTCTCATCATATTCAAGCTTATATAAGTCCTGAAAGAAAGTCAAAGGATGTCCGGTGGGGCCCGGGTCACAGTTTAAATGATGCAGGCCCAGCATGGAATGGTCCAAAATGGAGTGATACCGTGACTCTGTCAGATGCCCCAATGTTGACTGTAGATAACAGAAATATTGGTGTTCCAGAGGTACGGTCTAGTGCTTGGTCTGTGGATGATAATAGATGGGGTTGCGATCAGAACGATGAGAACAAAAATTGTGCTGACCGTAATGTTAATCATGAAGCAGCTGAAAGGAATGAGAAGGATGCAAATCTGTGGAAGGAAGATAATGTGGGTGCTTGTGTGGATCTTCCCAAATCAAGAGATACTGAAAAATGGCTTGGTGACATGTCTCCTGATTGGAATTACACGGTGCAGTCCTCCAACCATGTTGGGAAACAAGAGCATGGTCACATTACGCAAGGTGCAGAACCTTCAACTCTGGTACATGGTGCCGCTTCAATTATTGAACCAGAGATAGCTGAAAGATCTGATTTTCTGCAGAACAAGGATCTGAGGGGAGATGGAGTTATTTCCTTGCCTTATGACAATAGGAATGCCATTGAAGAACCTTCTAGTTTTCGTAATAACCTAAGTGTTACTGCAAATATTGTAGGCTACCAAAGTTTTGACAACAGTGGCCAGAGTTCAAGTGCTTTTCCTTTTTCAGGATTGAGCACAATTGGGCAAAGTCAAACACTAATCCCAGGCAGAGGAATTGTAAAAAGTCCGCATGATACACTGTCCCCAGAGGGTAAATCTGTGAACAAATTAGATATAGGTGATGCAAAAACTTCACTAGTTGATGGAATTCCTCAAGTTCCAAGTTTGGTAGGTGGTAAAGAACTTAAGCAACTTACCAATCTTTCAGCCTCTCTGGCTCAGTTACTTGGAAATCGGCAGCAACTTCCACAGATTTATGCTGCTTTAAATTCTCATAATGCGGTGAGTACCCCAACTCTCCTTCCCCAATCCGAAGGATCTTCTGAGCAGCTTTTGGGAGCAACTTTTCAGCCTGATCCAGCCATGTTATCTCATAAGCCGTATGATCCTATATGTGATAGCATAGAACATAGAATTAATAACAATCAAATGTGCCTTTTGCCAAATAGTGCTGGAAACACAAGTGTTGATGGAAAAGTAGAGAAATTGTCAAATGTTGTATCTCCATCGTCTTTACCTAGCGGAGCAAATACAAACAATTATCATCAGACCAATAATCCAGTACAAGAACCCACACATAAGAATCACCAGTTAAGTCAGCTGGAGTGTGGGGCAAAACCTGAGGTTGTCAAGGGAAATGGTGAACTTGGGGCCGAGGAAATCAAGAGCGATCAGGAAGAAAATAATTCCCCAGTTAATGGTCCCATGGAGGTCACAGAAAAAGATGGTGCTGACGGGGGCAAGAAACTCAAGGAGGTGAAGGGGAGTCGTGCATTCAAATTTGCACTTGTGGAAAACGTTAAGGAGCTTTTAAAACCCTCATGGAAAGAAGGTCAAGTCAGCAAAGATGCTTACAAAACTATAGTGAAGAAGGTGGTTGATAAAGTGACCAGTACGATGCAGGGGGCTAATATTCCCCAGACCCAAGAGAAGATTGATCATTATCTATCATTTTCAAAACCAAAGCTTACTAAACTTGTACAGGCATATGTAGAAAAAATGCACAAGGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CCCH

Protein Analysis

886

Amino Acids

99.13

Weight (kDa)

8.67

Isoelectric Point (pI)

57.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SCAF11-like_C PF23030 811 - 883 1.3e-07 SCAF11-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 740, 1433
AccB7I CCANNNNNTGG 2 cut(s) 368, 2342
AccI GTMKAC 1 cut(s) 616
AciI CCGC 8 cut(s) 22, 466, 733, 914, 1437, 1712, 1925, 2166
AclI AACGTT 1 cut(s) 2442
AclWI GGATC 5 cut(s) 1296, 1500, 1969, 1994, 2024
AcoI YGGCCR 1 cut(s) 1621
AcsI RAATTY 5 cut(s) 507, 902, 1791, 1912, 2423
AfaI GTAC 8 cut(s) 244, 671, 1131, 1428, 1933, 2208, 2539, 2625
AfiI CCNNNNNNNGG 7 cut(s) 212, 368, 455, 776, 1649, 1694, 2342
AflII CTTAAG 1 cut(s) 1829
AflIII ACRYGT 1 cut(s) 1329
AgsI TTSAA 8 cut(s) 962, 1419, 1443, 1451, 1547, 1632, 2422, 2601
AhlI ACTAGT 1 cut(s) 1780
AjiI CACGTC 1 cut(s) 134
AjnI CCWGG 4 cut(s) 197, 322, 502, 1687
AjuI GAANNNNNNNTTGG 2 cut(s) 1305, 1337
AleI CACNNNNGTG 1 cut(s) 882
Alw21I GWGCWC 1 cut(s) 1661
Alw26I GTCTC 4 cut(s) 146, 163, 324, 1338
AlwI GGATC 5 cut(s) 1296, 1500, 1969, 1994, 2024
AlwNI CAGNNNCTG 1 cut(s) 417
Ama87I CYCGRG 1 cut(s) 1009
AoxI GGCC 8 cut(s) 107, 140, 500, 1006, 1033, 1621, 2295, 2652
ApaI GGGCCC 1 cut(s) 1010
ApeKI GCWGC 6 cut(s) 306, 911, 1226, 1882, 1904, 1972
ApoI RAATTY 5 cut(s) 507, 902, 1791, 1912, 2423
AseI ATTAAT 1 cut(s) 2061
AspS9I GGNCC 6 cut(s) 1006, 1007, 1034, 1049, 2295, 2345
AsuC2I CCSGG 3 cut(s) 213, 1010, 1011
AsuHPI GGTGA 7 cut(s) 752, 1337, 1775, 1939, 2222, 2297, 2413
AvaI CYCGRG 1 cut(s) 1009
AvaII GGWCC 2 cut(s) 1049, 2345
AxyI CCTNAGG 2 cut(s) 120, 2265
BaeGI GKGCMC 1 cut(s) 1010
BalI TGGCCA 1 cut(s) 1623
BanI GGYRCC 2 cut(s) 740, 1433
BanII GRGCYC 2 cut(s) 449, 1010
BbsI GAAGAC 1 cut(s) 18
Bbv12I GWGCWC 1 cut(s) 1661
BbvI GCAGC 6 cut(s) 318, 898, 1238, 1891, 1894, 1984
BceAI ACGGC 1 cut(s) 2008
BciT130I CCWGG 4 cut(s) 199, 324, 504, 1689
BclI TGATCA 2 cut(s) 451, 2581
BcnI CCSGG 3 cut(s) 213, 1010, 1011
BcoDI GTCTC 4 cut(s) 146, 163, 324, 1338
BcuI ACTAGT 1 cut(s) 1780
BfaI CTAG 6 cut(s) 558, 648, 1137, 1557, 1781, 2163
BfmI CTRYAG 6 cut(s) 164, 460, 849, 1098, 1481, 2505
BfrI CTTAAG 1 cut(s) 1829
BglI GCCNNNNNGGC 1 cut(s) 1859
BglII AGATCT 1 cut(s) 1469
BisI GCNGC 8 cut(s) 307, 733, 912, 1227, 1437, 1883, 1905, 1973
BlpI GCTNAGC 1 cut(s) 864
BlsI GCNGC 8 cut(s) 308, 734, 913, 1228, 1438, 1884, 1906, 1974
BmcAI AGTACT 1 cut(s) 671
Bme1390I CCNGG 7 cut(s) 199, 213, 324, 504, 1010, 1011, 1689
Bme18I GGWCC 2 cut(s) 1049, 2345
BmeT110I CYCGRG 1 cut(s) 1009
BmgBI CACGTC 1 cut(s) 134
BmgT120I GGNCC 6 cut(s) 1006, 1007, 1034, 1049, 2295, 2345
BmiI GGNNCC 8 cut(s) 204, 446, 742, 1007, 1008, 1435, 2296, 2347
BmrFI CCNGG 7 cut(s) 199, 213, 324, 504, 1010, 1011, 1689
BmrI ACTGGG 2 cut(s) 549, 2330
BmsI GCATC 7 cut(s) 536, 1018, 1072, 1237, 1756, 2482, 2532
BmuI ACTGGG 2 cut(s) 549, 2330
BpiI GAAGAC 1 cut(s) 18
BpmI CTGGAG 4 cut(s) 132, 439, 457, 2267
Bpu10I CCTNAGC 1 cut(s) 174
Bpu1102I GCTNAGC 1 cut(s) 864
BpuEI CTTGAG 2 cut(s) 1782, 2378
BpuMI CCSGG 3 cut(s) 213, 1010, 1011
BsaBI GATNNNNATC 3 cut(s) 762, 1251, 2586
BsaI GGTCTC 1 cut(s) 163
BsaJI CCNNGG 5 cut(s) 198, 1009, 1687, 2298, 2349
BsaWI WCCGGW 1 cut(s) 999
BsaXI ACNNNNNCTCC 8 cut(s) 388, 406, 418, 436, 544, 574, 1494, 1524
Bsc4I CCNNNNNNNGG 7 cut(s) 212, 368, 455, 776, 1649, 1694, 2342
Bse1I ACTGG 7 cut(s) 143, 341, 544, 2204, 2233, 2336, 2535
Bse21I CCTNAGG 2 cut(s) 120, 2265
Bse8I GATNNNNATC 3 cut(s) 762, 1251, 2586
BseBI CCWGG 4 cut(s) 199, 324, 504, 1689
BseDI CCNNGG 5 cut(s) 198, 1009, 1687, 2298, 2349
BseGI GGATG 7 cut(s) 96, 277, 295, 321, 1000, 1159, 1252
BseJI GATNNNNATC 3 cut(s) 762, 1251, 2586
BseLI CCNNNNNNNGG 7 cut(s) 212, 368, 455, 776, 1649, 1694, 2342
BseMII CTCAG 7 cut(s) 68, 377, 855, 1487, 1877, 1959, 2256
BseNI ACTGG 7 cut(s) 143, 341, 544, 2204, 2233, 2336, 2535
BseSI GKGCMC 1 cut(s) 1010
BseXI GCAGC 6 cut(s) 318, 898, 1238, 1891, 1894, 1984
BseYI CCCAGC 2 cut(s) 606, 1036
BsgI GTGCAG 2 cut(s) 1376, 1428
BshFI GGCC 8 cut(s) 109, 142, 502, 1008, 1035, 1623, 2297, 2654
BshNI GGYRCC 2 cut(s) 740, 1433
BsiHKAI GWGCWC 1 cut(s) 1661
BsiHKCI CYCGRG 1 cut(s) 1009
BsiSI CCGG 3 cut(s) 213, 1000, 1010
BslFI GGGAC 3 cut(s) 343, 1711, 2331
BslI CCNNNNNNNGG 7 cut(s) 212, 368, 455, 776, 1649, 1694, 2342
BsmAI GTCTC 4 cut(s) 146, 163, 324, 1338
BsmFI GGGAC 3 cut(s) 343, 1711, 2331
BsmI GAATGC 2 cut(s) 1543, 2417
BsnI GGCC 8 cut(s) 109, 142, 502, 1008, 1035, 1623, 2297, 2654
Bso31I GGTCTC 1 cut(s) 163
BsoBI CYCGRG 1 cut(s) 1009
Bsp120I GGGCCC 1 cut(s) 1006
Bsp1286I GDGCHC 3 cut(s) 449, 1010, 1661
Bsp1407I TGTACA 1 cut(s) 2623
Bsp1720I GCTNAGC 1 cut(s) 864
Bsp19I CCATGG 1 cut(s) 2349
BspACI CCGC 8 cut(s) 22, 466, 733, 914, 1437, 1712, 1925, 2166
BspANI GGCC 8 cut(s) 109, 142, 502, 1008, 1035, 1623, 2297, 2654
BspCNI CTCAG 7 cut(s) 67, 378, 856, 1488, 1876, 1960, 2257
BspHI TCATGA 1 cut(s) 1219
BspLI GGNNCC 8 cut(s) 204, 446, 742, 1007, 1008, 1435, 2296, 2347
BspMAI CTGCAG 2 cut(s) 168, 1485
BspPI GGATC 5 cut(s) 1296, 1500, 1969, 1994, 2024
BspQI GCTCTTC 1 cut(s) 42
BspT107I GGYRCC 2 cut(s) 740, 1433
BspTI CTTAAG 1 cut(s) 1829
BspTNI GGTCTC 1 cut(s) 163
BsrGI TGTACA 1 cut(s) 2623
BsrI ACTGG 7 cut(s) 143, 341, 544, 2204, 2233, 2336, 2535
BssECI CCNNGG 5 cut(s) 198, 1009, 1687, 2298, 2349
BssT1I CCWWGG 1 cut(s) 2349
Bst2UI CCWGG 4 cut(s) 199, 324, 504, 1689
Bst4CI ACNGT 8 cut(s) 1019, 1069, 1099, 1134, 1208, 1354, 1619, 1725
Bst6I CTCTTC 1 cut(s) 42
BstAFI CTTAAG 1 cut(s) 1829
BstAUI TGTACA 1 cut(s) 2623
BstC8I GCNNGC 4 cut(s) 103, 107, 500, 1033
BstDSI CCRYGG 1 cut(s) 2349
BstENI CCTNNNNNAGG 1 cut(s) 1647
BstF5I GGATG 7 cut(s) 96, 277, 295, 321, 1000, 1159, 1252
BstMAI GTCTC 4 cut(s) 146, 163, 324, 1338
BstMWI GCNNNNNNNGC 2 cut(s) 1037, 1859
BstNI CCWGG 4 cut(s) 199, 324, 504, 1689
BstNSI RCATGY 1 cut(s) 1333
BstSCI CCNGG 7 cut(s) 197, 211, 322, 502, 1008, 1009, 1687
BstSFI CTRYAG 6 cut(s) 164, 460, 849, 1098, 1481, 2505
BstSLI GKGCMC 1 cut(s) 1010
BstV1I GCAGC 6 cut(s) 318, 898, 1238, 1891, 1894, 1984
BstV2I GAAGAC 1 cut(s) 18
BstX2I RGATCY 4 cut(s) 1288, 1469, 1492, 1961
BstYI RGATCY 4 cut(s) 1288, 1469, 1492, 1961
Bsu36I CCTNAGG 2 cut(s) 120, 2265
BsuRI GGCC 8 cut(s) 109, 142, 502, 1008, 1035, 1623, 2297, 2654
BtgI CCRYGG 1 cut(s) 2349
BtrI CACGTC 1 cut(s) 134
BtsCI GGATG 7 cut(s) 96, 277, 295, 321, 1000, 1159, 1252
BtsIMutI CAGTG 3 cut(s) 383, 1624, 1721
Cac8I GCNNGC 4 cut(s) 103, 107, 500, 1033
CaiI CAGNNNCTG 1 cut(s) 417
CciI TCATGA 1 cut(s) 1219
Cfr13I GGNCC 6 cut(s) 1006, 1007, 1034, 1049, 2295, 2345
Cfr9I CCCGGG 1 cut(s) 1009
Csp6I GTAC 8 cut(s) 243, 670, 1130, 1427, 1932, 2207, 2538, 2624
CviQI GTAC 8 cut(s) 243, 670, 1130, 1427, 1932, 2207, 2538, 2624
DraI TTTAAA 3 cut(s) 1023, 1911, 2457
EaeI YGGCCR 1 cut(s) 1621
Eam1104I CTCTTC 1 cut(s) 42
EarI CTCTTC 1 cut(s) 42
Eco130I CCWWGG 1 cut(s) 2349
Eco147I AGGCCT 1 cut(s) 2654
Eco24I GRGCYC 2 cut(s) 449, 1010
Eco31I GGTCTC 1 cut(s) 163
Eco47I GGWCC 2 cut(s) 1049, 2345
Eco81I CCTNAGG 2 cut(s) 120, 2265
Eco88I CYCGRG 1 cut(s) 1009
EcoNI CCTNNNNNAGG 1 cut(s) 1647
EcoO109I RGGNCCY 1 cut(s) 1006
EcoRI GAATTC 1 cut(s) 1791
EcoRII CCWGG 4 cut(s) 197, 322, 502, 1687
EcoT14I CCWWGG 1 cut(s) 2349
EcoT38I GRGCYC 2 cut(s) 449, 1010
ErhI CCWWGG 1 cut(s) 2349
FaqI GGGAC 3 cut(s) 343, 1711, 2331
FauI CCCGC 2 cut(s) 459, 907
FauNDI CATATG 1 cut(s) 2632
FbaI TGATCA 2 cut(s) 451, 2581
FblI GTMKAC 1 cut(s) 616
Fnu4HI GCNGC 8 cut(s) 307, 733, 912, 1227, 1437, 1883, 1905, 1973
FokI GGATG 7 cut(s) 103, 284, 302, 328, 1007, 1166, 1259
FriOI GRGCYC 2 cut(s) 449, 1010
Fsp4HI GCNGC 8 cut(s) 307, 733, 912, 1227, 1437, 1883, 1905, 1973
FspBI CTAG 6 cut(s) 558, 648, 1137, 1557, 1781, 2163
GluI GCNGC 8 cut(s) 307, 733, 912, 1227, 1437, 1883, 1905, 1973
GsaI CCCAGC 2 cut(s) 610, 1040
GsuI CTGGAG 4 cut(s) 132, 439, 457, 2267
HaeIII GGCC 8 cut(s) 109, 142, 502, 1008, 1035, 1623, 2297, 2654
HapII CCGG 3 cut(s) 213, 1000, 1010
HincII GTYRAC 2 cut(s) 617, 1095
HindII GTYRAC 2 cut(s) 617, 1095
HindIII AAGCTT 2 cut(s) 963, 2609
HinfI GANTC 7 cut(s) 125, 275, 470, 780, 1072, 2227, 2410
HpaII CCGG 3 cut(s) 213, 1000, 1010
HphI GGTGA 7 cut(s) 752, 1337, 1775, 1939, 2222, 2297, 2413
Hpy166II GTNNAC 5 cut(s) 227, 617, 1095, 1747, 2288
Hpy188I TCNGA 8 cut(s) 775, 1081, 1179, 1474, 1497, 1957, 1969, 2193
Hpy8I GTNNAC 5 cut(s) 227, 617, 1095, 1747, 2288
HpyCH4III ACNGT 8 cut(s) 1019, 1069, 1099, 1134, 1208, 1354, 1619, 1725
HpyCH4IV ACGT 3 cut(s) 133, 628, 2442
HpyF10VI GCNNNNNNNGC 2 cut(s) 1037, 1859
HpySE526I ACGT 3 cut(s) 133, 628, 2442
Ksp22I TGATCA 2 cut(s) 451, 2581
LguI GCTCTTC 1 cut(s) 42
LmnI GCTCC 6 cut(s) 414, 438, 444, 1982, 2168, 2449
Lsp1109I GCAGC 6 cut(s) 318, 898, 1238, 1891, 1894, 1984
LweI GCATC 7 cut(s) 536, 1018, 1072, 1237, 1756, 2482, 2532
MaeI CTAG 6 cut(s) 558, 648, 1137, 1557, 1781, 2163
MaeII ACGT 3 cut(s) 133, 628, 2442
MfeI CAATTG 3 cut(s) 518, 798, 1662
MflI RGATCY 4 cut(s) 1288, 1469, 1492, 1961
MhlI GDGCHC 3 cut(s) 449, 1010, 1661
MlsI TGGCCA 1 cut(s) 1623
MluNI TGGCCA 1 cut(s) 1623
MlyI GAGTC 3 cut(s) 269, 1066, 2419
MmeI TCCRAC 3 cut(s) 68, 353, 1389
Mox20I TGGCCA 1 cut(s) 1623
MscI TGGCCA 1 cut(s) 1623
MslI CAYNNNNRTG 3 cut(s) 234, 314, 882
Msp20I TGGCCA 1 cut(s) 1623
MspA1I CMGCKG 2 cut(s) 1229, 2245
MspCI CTTAAG 1 cut(s) 1829
MspI CCGG 3 cut(s) 213, 1000, 1010
MspR9I CCNGG 7 cut(s) 199, 213, 324, 504, 1010, 1011, 1689
MunI CAATTG 3 cut(s) 518, 798, 1662
Mva1269I GAATGC 2 cut(s) 1543, 2417
MvaI CCWGG 4 cut(s) 199, 324, 504, 1689
MwoI GCNNNNNNNGC 2 cut(s) 1037, 1859
NciI CCSGG 3 cut(s) 213, 1010, 1011
NcoI CCATGG 1 cut(s) 2349
NdeI CATATG 1 cut(s) 2632
NlaIV GGNNCC 8 cut(s) 204, 446, 742, 1007, 1008, 1435, 2296, 2347
NmeAIII GCCGAG 1 cut(s) 2323
NmuCI GTSAC 8 cut(s) 134, 381, 1013, 1069, 1325, 1391, 2356, 2530
NspI RCATGY 1 cut(s) 1333
OliI CACNNNNGTG 1 cut(s) 882
PagI TCATGA 1 cut(s) 1219
PceI AGGCCT 1 cut(s) 2654
PciI ACATGT 1 cut(s) 1329
PciSI GCTCTTC 1 cut(s) 42
PctI GAATGC 2 cut(s) 1543, 2417
PfeI GAWTC 4 cut(s) 125, 470, 780, 2227
PflFI GACNNNGTC 1 cut(s) 1075
PflMI CCANNNNNTGG 2 cut(s) 368, 2342
PkrI GCNGC 8 cut(s) 308, 734, 913, 1228, 1438, 1884, 1906, 1974
PleI GAGTC 3 cut(s) 269, 1066, 2418
PpsI GAGTC 3 cut(s) 269, 1066, 2418
PscI ACATGT 1 cut(s) 1329
PshBI ATTAAT 1 cut(s) 2061
Psp1406I AACGTT 1 cut(s) 2442
Psp6I CCWGG 4 cut(s) 197, 322, 502, 1687
PspFI CCCAGC 2 cut(s) 606, 1036
PspGI CCWGG 4 cut(s) 197, 322, 502, 1687
PspN4I GGNNCC 8 cut(s) 204, 446, 742, 1007, 1008, 1435, 2296, 2347
PspOMI GGGCCC 1 cut(s) 1006
PspPI GGNCC 6 cut(s) 1006, 1007, 1034, 1049, 2295, 2345
PstI CTGCAG 2 cut(s) 168, 1485
PstNI CAGNNNCTG 1 cut(s) 417
PsuI RGATCY 4 cut(s) 1288, 1469, 1492, 1961
PsyI GACNNNGTC 1 cut(s) 1075
PvuII CAGCTG 2 cut(s) 1229, 2245
RsaI GTAC 8 cut(s) 244, 671, 1131, 1428, 1933, 2208, 2539, 2625
RsaNI GTAC 8 cut(s) 243, 670, 1130, 1427, 1932, 2207, 2538, 2624
RseI CAYNNNNRTG 3 cut(s) 234, 314, 882
SalI GTCGAC 1 cut(s) 615
SapI GCTCTTC 1 cut(s) 42
SatI GCNGC 8 cut(s) 307, 733, 912, 1227, 1437, 1883, 1905, 1973
Sau96I GGNCC 6 cut(s) 1006, 1007, 1034, 1049, 2295, 2345
ScaI AGTACT 1 cut(s) 671
SchI GAGTC 3 cut(s) 269, 1066, 2419
ScrFI CCNGG 7 cut(s) 199, 213, 324, 504, 1010, 1011, 1689
SduI GDGCHC 3 cut(s) 449, 1010, 1661
SfaNI GCATC 7 cut(s) 536, 1018, 1072, 1237, 1756, 2482, 2532
SfcI CTRYAG 6 cut(s) 164, 460, 849, 1098, 1481, 2505
SinI GGWCC 2 cut(s) 1049, 2345
SmaI CCCGGG 1 cut(s) 1011
SmiMI CAYNNNNRTG 3 cut(s) 234, 314, 882
SmlI CTYRAG 3 cut(s) 1797, 1829, 2393
SmoI CTYRAG 3 cut(s) 1797, 1829, 2393
SpeI ACTAGT 1 cut(s) 1780
SseBI AGGCCT 1 cut(s) 2654
SsiI CCGC 8 cut(s) 22, 466, 733, 914, 1437, 1712, 1925, 2166
SspI AATATT 3 cut(s) 1114, 1591, 2557
SspMI CTAG 6 cut(s) 558, 648, 1137, 1557, 1781, 2163
StuI AGGCCT 1 cut(s) 2654
StyD4I CCNGG 7 cut(s) 197, 211, 322, 502, 1008, 1009, 1687
StyI CCWWGG 1 cut(s) 2349
TaaI ACNGT 8 cut(s) 1019, 1069, 1099, 1134, 1208, 1354, 1619, 1725
TaiI ACGT 3 cut(s) 136, 631, 2445
TaqI TCGA 4 cut(s) 483, 616, 756, 925
TatI WGTACW 3 cut(s) 669, 2206, 2623
TauI GCSGC 2 cut(s) 735, 1439
TfiI GAWTC 4 cut(s) 125, 470, 780, 2227
TscAI CASTG 3 cut(s) 390, 1624, 1728
TseFI GTSAC 8 cut(s) 134, 381, 1013, 1069, 1325, 1391, 2356, 2530
TseI GCWGC 6 cut(s) 306, 911, 1226, 1882, 1904, 1972
Tsp45I GTSAC 8 cut(s) 134, 381, 1013, 1069, 1325, 1391, 2356, 2530
TspDTI ATGAA 6 cut(s) 17, 75, 312, 594, 840, 1236
TspMI CCCGGG 1 cut(s) 1009
TspRI CASTG 3 cut(s) 390, 1624, 1728
Tth111I GACNNNGTC 1 cut(s) 1075
Van91I CCANNNNNTGG 2 cut(s) 368, 2342
Vha464I CTTAAG 1 cut(s) 1829
VpaK11BI GGWCC 2 cut(s) 1049, 2345
VspI ATTAAT 1 cut(s) 2061
XagI CCTNNNNNAGG 1 cut(s) 1647
XapI RAATTY 5 cut(s) 507, 902, 1791, 1912, 2423
XceI RCATGY 1 cut(s) 1333
XcmI CCANNNNNNNNNTGG 1 cut(s) 369
XmaI CCCGGG 1 cut(s) 1009
XmiI GTMKAC 1 cut(s) 616
XspI CTAG 6 cut(s) 558, 648, 1137, 1557, 1781, 2163
ZrmI AGTACT 1 cut(s) 671
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.