Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0010866

Physical Location & Seq

Genomic Coordinates Reverse (-)

30893333 .. 30897436

Gene Structure 4104 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2718 bp

ATGACGGCCTCCGTGGAGAACCGCCAGTTCCCCCACCTCGACCCGCCGATAAACGGCGTCGTCCGCTCCTTCAACTTCTCCGATCTCACTCCCTCGAAACACGCGCCTTTCGTCGAAAGCAACGACTCATCGTCCGATGACGACGAGAATGAGGTCGCCGTCGTCGAGGAATACACGGATTTAATCCGGAGAGGCAACAACGAATTAGAGCCGTCCATCTTGGACCCCAGAGATGAACCCACATCAGACAGCTGGGTGCGTCGTAACTCGTCTATGGTCCGCCTCACTGGAAAACACCCCTTCAATTGCGAACCGCCACTCACCCGCCTCATGCACCACGGATTCATCACCCCAGTCCCACTCCACTACGTCCGCAATCACGGCATCGTCCCCAAGGCCACGTGGCAGGACTGGACCGTTGAGATAACCGGTCTGGTCCGCCGCCCGACCCGGTTCACCATGGACCAGCTCGTCCGCGAATTCAAGCCACGGGAGTTCCCCGTGACCCTTGTCTGCGCGGGAAACCGGAGGAAAGAACAGAATCTCGTCAAGCAGACAATCGGCTTCAACTGGGGCGCCGCCGGCATCTCCAACTCCGTGTGGCGCGGCATCCCGCTTTGCGACGTGCTGAAGCGGTGCGGAATCCGCAGCCGCAAGAACGGCGCCCTCAACGTGTGCTTCGAGGGAGCCGAGGACCTGCCGGGTGGCGGTGGGACCAAGTACGGCACGAGCTTGAGAAAGGAGGTGGCGATGGACCCCTCGAGGGATATAATCCTGGCGTACATGCAAAACGGGGAGCTTTTGGAGCCGGATCACGGGTTTCCGGTTCGGGTCATAATACCGGGGTTCATCGGGGGTCGGATGGTGAAGTGGTTGAAACGAATCGTGGTCACAACCTCGGAATCCGACAATTATTACCACTTCAAGGATAATCGAGTGCTCCCGTCGCACGTGGATGCGGAGCTGGCCAACGCTGAAGCGTGGTGGTACAAGCCGGAGTATATCATTAACGAGCTGAATATAAACTCGGTTATAACGACGCCGTGTCACGAGGAGATTTTGCCGATCAACTCATATACGACTCAGCAGCCGTATACAATGAAAGGCTACGCATATTCGGGCGGCGGGAAGAAAGTGACACGAGTGGAGATAACTATGGACGGCGGGGACACGTGGCATGTCTGCATGTTAGCCCACCAGGAGAGGCCGAACAAATATGGGAAGTACTGGTGCTGGTGTTTCTGGTCACTGGAAGTGGAGGTGCTCGACCTACTCGCTGCCAAAGAGATTGCCGTCCGAGCTTGGGACGAGACACTCAATACTCAGCCCGAGAAACTCATTTGGAACGTCATGGGAATGATGAACAACTGCTGGTTTCGAGTGAAAACCAATGTGTGCAAACCACACAAGGGAGAGATAGGACTATTGTTTGAGCATCCAACTCAACCTGGAAACCAATCAGGTGGGTGGATGGCCAAAGAAAAACGCTTGGACTCTGAATCCAACACAACCCTAAAGAAGAGTTCTTCAACACCCTTCATGAACACTAGTGCATCCAAGATGTACTCAATGTCAGATGTCAAGAAGCACAACTCTTCTCAATCTGCTTGGATCGTTGTCCACGGCCACGTCTACGACTGCACTCGCTTCCTCAATGATCACCCTGGTGGCGCTGACAGCATTCTCATCAACGCTGGCACTGATTGCACCGAAGAGTTTGGTGCCATCCATTCGGAAAAAGCCAAGAAAATGATTGAGGATTATAGAATCGGAGAGTTGGTGACTACGAATTATGCTTCAGACTCCACATCTAGTTCCCCTAATAACTCTGTACATGGGCCACCAAGAACAACATCTGTAGTTGACCCTATTTCTTCTAACATGACGCAGCTAGCCCCAATTAAAGAAGTAATGCATTCAAGAAGCATCGCACTTATTCCGCGTGAGAAAATCCCATGTAAGCTCATAGCCAAGATATCGATCTCTCACGATGTCAGGCTCTTTAGATTTGGATTGCCTTCAGAGGACCAAGTTTTGGGATTGCCGGTGGGAAAGCACATTTTTGTGTGTGCTACAATTGAGGACAAGCTTTGCATGAGGGCTTACACTCCAAGCAGCTCAATTGATGAAGTTGGGTACTTTGATTTGGTGGTGAAAGTTTACTTCAAGAATGTGCACCCTAAGTTCCCCAATGGGGGTATCATGTCACAGTATTTGGACTCACTGCCAATAGGTGCATCCCTAGACATCAAGGGTCCCTTAGGGCACATAGAGTACACTGGTCGTGGTAATTTTATGGTCAACGGCAAGCCAAAGTTTGCAAAGAAGCTTGCTATGCTGGCTGGTGGGACCGGAGGATCGATCACCCCAATTTACCAAGTGGTTCAAGCCATACTGAAGGACCCAGTGGATGAGACCGAGATGTATGTGGTGTATGCAAACCGCACAGAAGATGACATTTTGCTGCGGGAAGAACTTGATGGTTGGGCTAAACAACATGAGAGGTTCAAGGTTTGGTATGTGGTGGAGAATGACAGGGAAGGGTGGGAATACAGTGTGGGATTCATCACGGAGAGTGTGCTCAGGGAGCACATTCCCGATGGATCGGACGGCGCTCTTGCACTAGCATGCGGCCCCCCGCCGATGATCAAATTTGCCGTGCAGCCGAATTTGGAGAAGATGAATTATGATACCACAAATTCATTCCTGTTGTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001505 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005829 GO:0005886 GO:0006082 GO:0006807 GO:0006809 GO:0008150 GO:0008152 GO:0008940 GO:0009058 GO:0009314 GO:0009416 GO:0009605 GO:0009607 GO:0009608 GO:0009610 GO:0009620 GO:0009628 GO:0009703 GO:0009987 GO:0016020 GO:0016491 GO:0016661 GO:0017144 GO:0034641 GO:0042126 GO:0042128 GO:0042133 GO:0042136 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046209 GO:0046857 GO:0050896 GO:0051704 GO:0051707 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:0071941 GO:0071944 GO:0072593 GO:1903409 GO:2001057

KEGG Pathways

Metabolic & Signaling

ko00910 ko01120 map00910 map01120

Pfam Domains

Protein Families

Cyt-b5 FAD_binding_6 Mo-co_dimer NAD_binding_1 Oxidored_molyb

Protein Analysis

906

Amino Acids

101.81

Weight (kDa)

6.3

Isoelectric Point (pI)

41.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Oxidored_molyb	PF00174	127 - 306	5.5e-55	Oxidoreductase molybdopterin binding domain
Mo-co_dimer	PF03404	334 - 465	1e-55	Mo-co oxidoreductase dimerisation domain
Cyt-b5	PF00173	524 - 593	8.3e-27	Cytochrome b5-like Heme/Steroid binding domain
FAD_binding_6	PF00970	653 - 759	2.3e-36	Oxidoreductase FAD-binding domain
NAD_binding_1	PF00175	779 - 887	2.8e-32	Oxidoreductase NAD-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0010866)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G37130 AT1G77760
fragaria_vesca	FvH4_5g39010
malus_domestica	MD08G1172400.v1.1 MD15G1357900.v1.1
prunus_persica	Prupe.1G505400_v2.0.a1
pyrus_communis	pycom08g14700 pycom15g32000
rosa_chinensis	RchiOBHm_Chr7g0240971
rosa_laevigata	RLG00000000608
rosa_multiflora	Rmu_co8418311.1_g000001 Rmu_sc0041887.1_g000001 Rmu_ssc0000392.1_g000001
rosa_roxburghii	Rroxscaffold_3G00219350
rosa_rugosa	Rorug07G0341100
rosa_samantha	Rh7AG495900 Rh7BG467400 Rh7CG513400 Rh7DG480400
rosa_wichuraiana	Rw7G041900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1034
AasI	GACNNNNNNGTC	1 cut(s)	470
AbsI	CCTCGAGG	1 cut(s)	760
Acc36I	ACCTGC	1 cut(s)	705
AccB1I	GGYRCC	3 cut(s)	575, 662, 1721
AccB7I	CCANNNNNTGG	1 cut(s)	2035
AccBSI	CCGCTC	1 cut(s)	66
AccI	GTMKAC	2 cut(s)	1094, 1632
AccII	CGCG	5 cut(s)	104, 477, 518, 606, 1942
AccIII	TCCGGA	1 cut(s)	186
AclWI	GGATC	4 cut(s)	819, 1619, 2365, 2611
AcoI	YGGCCR	3 cut(s)	966, 1473, 1624
AcsI	RAATTY	4 cut(s)	479, 2651, 2668, 2698
AcuI	CTGAAG	5 cut(s)	650, 996, 1782, 2004, 2417
AcvI	CACGTG	3 cut(s)	402, 952, 1173
AcyI	GRCGYC	4 cut(s)	57, 576, 663, 1040
AfaI	GTAC	8 cut(s)	722, 782, 989, 1226, 1565, 1833, 2138, 2276
AflIII	ACRYGT	2 cut(s)	672, 1170
AgeI	ACCGGT	1 cut(s)	428
AhdI	GACNNNNNGTC	2 cut(s)	130, 1044
AhlI	ACTAGT	1 cut(s)	1547
AjiI	CACGTC	2 cut(s)	625, 1630
AjnI	CCWGG	4 cut(s)	774, 1197, 1447, 1663
AleI	CACNNNNGTG	1 cut(s)	1665
Alw21I	GWGCWC	5 cut(s)	942, 1266, 2178, 2583, 2592
Alw26I	GTCTC	2 cut(s)	1304, 2408
Alw44I	GTGCAC	1 cut(s)	2174
AlwI	GGATC	4 cut(s)	819, 1619, 2365, 2611
Ama87I	CYCGRG	2 cut(s)	760, 1328
Aor13HI	TCCGGA	1 cut(s)	186
AoxI	GGCC	8 cut(s)	6, 396, 966, 1205, 1473, 1624, 1838, 2632
ApaLI	GTGCAC	1 cut(s)	2174
ApeKI	GCWGC	7 cut(s)	648, 1087, 1277, 1888, 2115, 2464, 2662
ApoI	RAATTY	4 cut(s)	479, 2651, 2668, 2698
AsiGI	ACCGGT	1 cut(s)	428
AspLEI	GCGC	7 cut(s)	106, 518, 578, 606, 665, 1673, 2615
AsuC2I	CCSGG	3 cut(s)	451, 702, 843
AsuHPI	GGTGA	8 cut(s)	313, 340, 448, 877, 1652, 1792, 2164, 2356
AsuNHI	GCTAGC	1 cut(s)	1891
AvaI	CYCGRG	2 cut(s)	760, 1328
AxyI	CCTNAGG	1 cut(s)	2260
BaeGI	GKGCMC	2 cut(s)	2178, 2268
BalI	TGGCCA	2 cut(s)	968, 1475
BanI	GGYRCC	3 cut(s)	575, 662, 1721
BauI	CACGAG	3 cut(s)	727, 1049, 1140
BbrPI	CACGTG	3 cut(s)	402, 952, 1173
Bbv12I	GWGCWC	5 cut(s)	942, 1266, 2178, 2583, 2592
BbvI	GCAGC	7 cut(s)	660, 1099, 1264, 1900, 2127, 2451, 2674
BccI	CCATC	7 cut(s)	224, 745, 856, 1465, 1733, 2474, 2594
BciT130I	CCWGG	4 cut(s)	776, 1199, 1449, 1665
BclI	TGATCA	2 cut(s)	1657, 2646
BcnI	CCSGG	3 cut(s)	451, 702, 843
BcoDI	GTCTC	2 cut(s)	1304, 2408
BcuI	ACTAGT	1 cut(s)	1547
BfaI	CTAG	5 cut(s)	1548, 1812, 1892, 2243, 2624
BfmI	CTRYAG	1 cut(s)	1857
BfoI	RGCGCY	4 cut(s)	579, 666, 1674, 2616
BfuAI	ACCTGC	1 cut(s)	705
BmcAI	AGTACT	1 cut(s)	1226
Bme1390I	CCNGG	7 cut(s)	451, 702, 776, 843, 1199, 1449, 1665
BmeRI	GACNNNNNGTC	2 cut(s)	130, 1044
BmeT110I	CYCGRG	2 cut(s)	760, 1328
BmgBI	CACGTC	2 cut(s)	625, 1630
BmrFI	CCNGG	7 cut(s)	451, 702, 776, 843, 1199, 1449, 1665
BmrI	ACTGGG	3 cut(s)	347, 580, 2399
BmsI	GCATC	8 cut(s)	393, 594, 618, 946, 1444, 1562, 1935, 2246
BmtI	GCTAGC	1 cut(s)	1895
BmuI	ACTGGG	3 cut(s)	347, 580, 2399
BoxI	GACNNNNGTC	1 cut(s)	509
Bpu10I	CCTNAGC	1 cut(s)	2582
BpuEI	CTTGAG	1 cut(s)	754
BpuMI	CCSGG	3 cut(s)	451, 702, 843
Bsa29I	ATCGAT	2 cut(s)	1979, 2360
BsaAI	YACGTR	3 cut(s)	402, 952, 1173
BsaBI	GATNNNNATC	1 cut(s)	1979
BsaHI	GRCGYC	4 cut(s)	57, 576, 663, 1040
BsaI	GGTCTC	1 cut(s)	2408
BsaWI	WCCGGW	5 cut(s)	186, 428, 525, 823, 2351
BsaXI	ACNNNNNCTCC	2 cut(s)	1764, 1794
Bse118I	RCCGGY	3 cut(s)	428, 581, 2044
Bse1I	ACTGG	9 cut(s)	25, 292, 353, 416, 575, 1232, 1254, 2284, 2405
Bse21I	CCTNAGG	1 cut(s)	2260
Bse8I	GATNNNNATC	1 cut(s)	1979
BseAI	TCCGGA	1 cut(s)	186
BseBI	CCWGG	4 cut(s)	776, 1199, 1449, 1665
BseCI	ATCGAT	2 cut(s)	1979, 2360
BseGI	GGATG	9 cut(s)	609, 867, 961, 1435, 1476, 1553, 1725, 2237, 2416
BseJI	GATNNNNATC	1 cut(s)	1979
BseMII	CTCAG	3 cut(s)	1097, 1337, 2596
BseNI	ACTGG	9 cut(s)	25, 292, 353, 416, 575, 1232, 1254, 2284, 2405
BseRI	GAGGAG	1 cut(s)	1067
BseSI	GKGCMC	2 cut(s)	2178, 2268
BseXI	GCAGC	7 cut(s)	660, 1099, 1264, 1900, 2127, 2451, 2674
BseYI	CCCAGC	1 cut(s)	252
BsgI	GTGCAG	2 cut(s)	1624, 2681
Bsh1236I	CGCG	5 cut(s)	104, 477, 518, 606, 1942
BshFI	GGCC	8 cut(s)	8, 398, 968, 1207, 1475, 1626, 1840, 2634
BshNI	GGYRCC	3 cut(s)	575, 662, 1721
BshTI	ACCGGT	1 cut(s)	428
BshVI	ATCGAT	2 cut(s)	1979, 2360
BsiHKAI	GWGCWC	5 cut(s)	942, 1266, 2178, 2583, 2592
BsiHKCI	CYCGRG	2 cut(s)	760, 1328
BslFI	GGGAC	7 cut(s)	341, 374, 727, 1181, 1319, 2241, 2362
BsmAI	GTCTC	2 cut(s)	1304, 2408
BsmFI	GGGAC	7 cut(s)	341, 374, 727, 1181, 1319, 2241, 2362
BsmI	GAATGC	2 cut(s)	1680, 1915
BsnI	GGCC	8 cut(s)	8, 398, 968, 1207, 1475, 1626, 1840, 2634
Bso31I	GGTCTC	1 cut(s)	2408
BsoBI	CYCGRG	2 cut(s)	760, 1328
Bsp1286I	GDGCHC	6 cut(s)	942, 1266, 2178, 2268, 2583, 2592
Bsp13I	TCCGGA	1 cut(s)	186
Bsp1407I	TGTACA	1 cut(s)	1831
Bsp19I	CCATGG	1 cut(s)	459
BspANI	GGCC	8 cut(s)	8, 398, 968, 1207, 1475, 1626, 1840, 2634
BspCNI	CTCAG	3 cut(s)	1096, 1336, 2595
BspDI	ATCGAT	2 cut(s)	1979, 2360
BspEI	TCCGGA	1 cut(s)	186
BspFNI	CGCG	5 cut(s)	104, 477, 518, 606, 1942
BspHI	TCATGA	1 cut(s)	1539
BspMI	ACCTGC	1 cut(s)	705
BspOI	GCTAGC	1 cut(s)	1895
BspPI	GGATC	4 cut(s)	819, 1619, 2365, 2611
BspT107I	GGYRCC	3 cut(s)	575, 662, 1721
BspTNI	GGTCTC	1 cut(s)	2408
BsrBI	CCGCTC	1 cut(s)	66
BsrFI	RCCGGY	3 cut(s)	428, 581, 2044
BsrGI	TGTACA	1 cut(s)	1831
BsrI	ACTGG	9 cut(s)	25, 292, 353, 416, 575, 1232, 1254, 2284, 2405
BssAI	RCCGGY	3 cut(s)	428, 581, 2044
BssNAI	GTATAC	1 cut(s)	1095
BssNI	GRCGYC	4 cut(s)	57, 576, 663, 1040
BssSI	CACGAG	3 cut(s)	727, 1049, 1140
BssT1I	CCWWGG	2 cut(s)	393, 459
Bst1107I	GTATAC	1 cut(s)	1095
Bst2BI	CACGAG	3 cut(s)	727, 1049, 1140
Bst2UI	CCWGG	4 cut(s)	776, 1199, 1449, 1665
Bst4CI	ACNGT	3 cut(s)	418, 2211, 2555
Bst6I	CTCTTC	3 cut(s)	1514, 1600, 1707
BstACI	GRCGYC	4 cut(s)	57, 576, 663, 1040
BstAPI	GCANNNNNTGC	1 cut(s)	1704
BstAUI	TGTACA	1 cut(s)	1831
BstBAI	YACGTR	3 cut(s)	402, 952, 1173
BstC8I	GCNNGC	8 cut(s)	583, 966, 1696, 1893, 2309, 2331, 2340, 2629
BstDEI	CTNAG	5 cut(s)	1083, 1323, 2181, 2260, 2582
BstDSI	CCRYGG	5 cut(s)	12, 337, 459, 488, 1621
BstF5I	GGATG	9 cut(s)	609, 867, 961, 1435, 1476, 1553, 1725, 2237, 2416
BstFNI	CGCG	5 cut(s)	104, 477, 518, 606, 1942
BstH2I	RGCGCY	4 cut(s)	579, 666, 1674, 2616
BstHHI	GCGC	7 cut(s)	106, 518, 578, 606, 665, 1673, 2615
BstMAI	GTCTC	2 cut(s)	1304, 2408
BstNI	CCWGG	4 cut(s)	776, 1199, 1449, 1665
BstNSI	RCATGY	4 cut(s)	787, 1181, 1189, 2631
BstPAI	GACNNNNGTC	1 cut(s)	509
BstSCI	CCNGG	7 cut(s)	449, 700, 774, 841, 1197, 1447, 1663
BstSFI	CTRYAG	1 cut(s)	1857
BstSLI	GKGCMC	2 cut(s)	2178, 2268
BstUI	CGCG	5 cut(s)	104, 477, 518, 606, 1942
BstV1I	GCAGC	7 cut(s)	660, 1099, 1264, 1900, 2127, 2451, 2674
BstXI	CCANNNNNNTGG	1 cut(s)	1463
BstZ17I	GTATAC	1 cut(s)	1095
Bsu15I	ATCGAT	2 cut(s)	1979, 2360
Bsu36I	CCTNAGG	1 cut(s)	2260
BsuRI	GGCC	8 cut(s)	8, 398, 968, 1207, 1475, 1626, 1840, 2634
BsuTUI	ATCGAT	2 cut(s)	1979, 2360
BtgI	CCRYGG	5 cut(s)	12, 337, 459, 488, 1621
BtgZI	GCGATG	2 cut(s)	764, 1912
BtrI	CACGTC	2 cut(s)	625, 1630
BtsCI	GGATG	9 cut(s)	609, 867, 961, 1435, 1476, 1553, 1725, 2237, 2416
BtsI	GCAGTG	1 cut(s)	2222
BtsIMutI	CAGTG	7 cut(s)	285, 1247, 1698, 2222, 2277, 2412, 2560
BveI	ACCTGC	1 cut(s)	705
Cac8I	GCNNGC	8 cut(s)	583, 966, 1696, 1893, 2309, 2331, 2340, 2629
CciI	TCATGA	1 cut(s)	1539
CfoI	GCGC	7 cut(s)	106, 518, 578, 606, 665, 1673, 2615
Cfr10I	RCCGGY	3 cut(s)	428, 581, 2044
ClaI	ATCGAT	2 cut(s)	1979, 2360
CseI	GACGC	4 cut(s)	46, 248, 1048, 1894
Csp6I	GTAC	8 cut(s)	721, 781, 988, 1225, 1564, 1832, 2137, 2275
CspAI	ACCGGT	1 cut(s)	428
CviQI	GTAC	8 cut(s)	721, 781, 988, 1225, 1564, 1832, 2137, 2275
DdeI	CTNAG	5 cut(s)	1083, 1323, 2181, 2260, 2582
DinI	GGCGCC	2 cut(s)	577, 664
DrdI	GACNNNNNNGTC	1 cut(s)	470
DriI	GACNNNNNGTC	2 cut(s)	130, 1044
DseDI	GACNNNNNNGTC	1 cut(s)	470
EaeI	YGGCCR	3 cut(s)	966, 1473, 1624
Eam1104I	CTCTTC	3 cut(s)	1514, 1600, 1707
Eam1105I	GACNNNNNGTC	2 cut(s)	130, 1044
EarI	CTCTTC	3 cut(s)	1514, 1600, 1707
EciI	GGCGGA	2 cut(s)	269, 428
Eco130I	CCWWGG	2 cut(s)	393, 459
Eco31I	GGTCTC	1 cut(s)	2408
Eco32I	GATATC	1 cut(s)	1977
Eco57I	CTGAAG	5 cut(s)	650, 996, 1782, 2004, 2417
Eco72I	CACGTG	3 cut(s)	402, 952, 1173
Eco81I	CCTNAGG	1 cut(s)	2260
Eco88I	CYCGRG	2 cut(s)	760, 1328
EcoO109I	RGGNCCY	3 cut(s)	694, 2255, 2401
EcoRI	GAATTC	1 cut(s)	479
EcoRII	CCWGG	4 cut(s)	774, 1197, 1447, 1663
EcoRV	GATATC	1 cut(s)	1977
EcoT14I	CCWWGG	2 cut(s)	393, 459
EcoT22I	ATGCAT	1 cut(s)	1917
EgeI	GGCGCC	2 cut(s)	577, 664
EheI	GGCGCC	2 cut(s)	577, 664
ErhI	CCWWGG	2 cut(s)	393, 459
FalI	AAGNNNNNCTT	2 cut(s)	2243, 2275
FaqI	GGGAC	7 cut(s)	341, 374, 727, 1181, 1319, 2241, 2362
FauI	CCCGC	8 cut(s)	51, 332, 511, 621, 1118, 1157, 2460, 2646
FbaI	TGATCA	2 cut(s)	1657, 2646
FblI	GTMKAC	2 cut(s)	1094, 1632
FokI	GGATG	9 cut(s)	596, 874, 968, 1422, 1483, 1540, 1712, 2224, 2423
FspBI	CTAG	5 cut(s)	1548, 1812, 1892, 2243, 2624
GlaI	GCGC	7 cut(s)	105, 517, 577, 605, 664, 1672, 2614
GsaI	CCCAGC	1 cut(s)	256
HaeII	RGCGCY	4 cut(s)	579, 666, 1674, 2616
HaeIII	GGCC	8 cut(s)	8, 398, 968, 1207, 1475, 1626, 1840, 2634
HgaI	GACGC	4 cut(s)	46, 248, 1048, 1894
HhaI	GCGC	7 cut(s)	106, 518, 578, 606, 665, 1673, 2615
Hin1I	GRCGYC	4 cut(s)	57, 576, 663, 1040
Hin6I	GCGC	7 cut(s)	104, 516, 576, 604, 663, 1671, 2613
HinP1I	GCGC	7 cut(s)	104, 516, 576, 604, 663, 1671, 2613
HincII	GTYRAC	2 cut(s)	1864, 2302
HindII	GTYRAC	2 cut(s)	1864, 2302
HindIII	AAGCTT	2 cut(s)	2087, 2327
HphI	GGTGA	8 cut(s)	313, 340, 448, 877, 1652, 1792, 2164, 2356
Hpy166II	GTNNAC	9 cut(s)	456, 1095, 1621, 1633, 1864, 2161, 2176, 2277, 2302
Hpy188III	TCNNGA	8 cut(s)	187, 1049, 1540, 1582, 1920, 1988, 2167, 2597
Hpy8I	GTNNAC	9 cut(s)	456, 1095, 1621, 1633, 1864, 2161, 2176, 2277, 2302
Hpy99I	CGWCG	9 cut(s)	62, 116, 146, 164, 167, 264, 626, 949, 1042
HpyAV	CCTTC	6 cut(s)	79, 310, 1546, 2028, 2392, 2534
HpyCH4III	ACNGT	3 cut(s)	418, 2211, 2555
HpyCH4IV	ACGT	8 cut(s)	369, 401, 624, 672, 951, 1172, 1347, 1629
HpyF3I	CTNAG	5 cut(s)	1083, 1323, 2181, 2260, 2582
HpySE526I	ACGT	8 cut(s)	369, 401, 624, 672, 951, 1172, 1347, 1629
Hsp92I	GRCGYC	4 cut(s)	57, 576, 663, 1040
HspAI	GCGC	7 cut(s)	104, 516, 576, 604, 663, 1671, 2613
KasI	GGCGCC	2 cut(s)	575, 662
KflI	GGGWCCC	1 cut(s)	2255
Kpn2I	TCCGGA	1 cut(s)	186
KroI	GCCGGC	1 cut(s)	581
KroNI	GCCGGC	1 cut(s)	583
Ksp22I	TGATCA	2 cut(s)	1657, 2646
LmnI	GCTCC	7 cut(s)	71, 686, 796, 805, 945, 961, 2587
Lsp1109I	GCAGC	7 cut(s)	660, 1099, 1264, 1900, 2127, 2451, 2674
LweI	GCATC	8 cut(s)	393, 594, 618, 946, 1444, 1562, 1935, 2246
MaeI	CTAG	5 cut(s)	1548, 1812, 1892, 2243, 2624
MaeII	ACGT	8 cut(s)	369, 401, 624, 672, 951, 1172, 1347, 1629
MaeIII	GTNAC	8 cut(s)	263, 502, 889, 1046, 1135, 1245, 1780, 2205
MbiI	CCGCTC	1 cut(s)	66
MboII	GAAGA	9 cut(s)	1141, 1518, 1531, 1587, 1724, 1866, 2462, 2483, 2689
MfeI	CAATTG	3 cut(s)	304, 2076, 2121
MhlI	GDGCHC	6 cut(s)	942, 1266, 2178, 2268, 2583, 2592
MlsI	TGGCCA	2 cut(s)	968, 1475
MluNI	TGGCCA	2 cut(s)	968, 1475
Mly113I	GGCGCC	2 cut(s)	576, 663
MlyI	GAGTC	5 cut(s)	119, 1075, 1487, 1796, 2213
MmeI	TCCRAC	5 cut(s)	615, 839, 930, 1463, 1527
Mox20I	TGGCCA	2 cut(s)	968, 1475
Mph1103I	ATGCAT	1 cut(s)	1917
MroI	TCCGGA	1 cut(s)	186
MroNI	GCCGGC	1 cut(s)	581
MscI	TGGCCA	2 cut(s)	968, 1475
MseI	TTAA	3 cut(s)	182, 1008, 1902
MslI	CAYNNNNRTG	5 cut(s)	954, 1355, 1665, 2063, 2626
Msp20I	TGGCCA	2 cut(s)	968, 1475
MspA1I	CMGCKG	1 cut(s)	252
MspR9I	CCNGG	7 cut(s)	451, 702, 776, 843, 1199, 1449, 1665
MunI	CAATTG	3 cut(s)	304, 2076, 2121
Mva1269I	GAATGC	2 cut(s)	1680, 1915
MvaI	CCWGG	4 cut(s)	776, 1199, 1449, 1665
MvnI	CGCG	5 cut(s)	104, 477, 518, 606, 1942
NaeI	GCCGGC	1 cut(s)	583
NarI	GGCGCC	2 cut(s)	576, 663
NciI	CCSGG	3 cut(s)	451, 702, 843
NcoI	CCATGG	1 cut(s)	459
NgoMIV	GCCGGC	1 cut(s)	581
NheI	GCTAGC	1 cut(s)	1891
NmeAIII	GCCGAG	1 cut(s)	715
NmuCI	GTSAC	7 cut(s)	502, 889, 1046, 1135, 1245, 1780, 2205
NsiI	ATGCAT	1 cut(s)	1917
NspI	RCATGY	4 cut(s)	787, 1181, 1189, 2631
OliI	CACNNNNGTG	1 cut(s)	1665
PaeI	GCATGC	1 cut(s)	2631
PaeR7I	CTCGAG	1 cut(s)	760
PagI	TCATGA	1 cut(s)	1539
PcsI	WCGNNNNNNNCGW	6 cut(s)	108, 120, 162, 678, 687, 1034
PctI	GAATGC	2 cut(s)	1680, 1915
PdiI	GCCGGC	1 cut(s)	583
PfeI	GAWTC	8 cut(s)	342, 541, 642, 882, 902, 1499, 1767, 2562
PflMI	CCANNNNNTGG	1 cut(s)	2035
PinAI	ACCGGT	1 cut(s)	428
PleI	GAGTC	5 cut(s)	119, 1075, 1487, 1796, 2213
PluTI	GGCGCC	2 cut(s)	579, 666
PmaCI	CACGTG	3 cut(s)	402, 952, 1173
PmlI	CACGTG	3 cut(s)	402, 952, 1173
PpsI	GAGTC	5 cut(s)	119, 1075, 1487, 1796, 2213
Ppu21I	YACGTR	3 cut(s)	402, 952, 1173
PpuMI	RGGWCCY	3 cut(s)	694, 2255, 2401
PshAI	GACNNNNGTC	1 cut(s)	509
PsiI	TTATAA	1 cut(s)	1034
Psp5II	RGGWCCY	3 cut(s)	694, 2255, 2401
Psp6I	CCWGG	4 cut(s)	774, 1197, 1447, 1663
PspCI	CACGTG	3 cut(s)	402, 952, 1173
PspFI	CCCAGC	1 cut(s)	252
PspGI	CCWGG	4 cut(s)	774, 1197, 1447, 1663
PspPPI	RGGWCCY	3 cut(s)	694, 2255, 2401
PspXI	VCTCGAGB	1 cut(s)	760
PvuII	CAGCTG	1 cut(s)	252
RsaI	GTAC	8 cut(s)	722, 782, 989, 1226, 1565, 1833, 2138, 2276
RsaNI	GTAC	8 cut(s)	721, 781, 988, 1225, 1564, 1832, 2137, 2275
RseI	CAYNNNNRTG	5 cut(s)	954, 1355, 1665, 2063, 2626
SaqAI	TTAA	3 cut(s)	182, 1008, 1902
ScaI	AGTACT	1 cut(s)	1226
SchI	GAGTC	5 cut(s)	119, 1075, 1487, 1796, 2213
ScrFI	CCNGG	7 cut(s)	451, 702, 776, 843, 1199, 1449, 1665
SduI	GDGCHC	6 cut(s)	942, 1266, 2178, 2268, 2583, 2592
SfaNI	GCATC	8 cut(s)	393, 594, 618, 946, 1444, 1562, 1935, 2246
SfcI	CTRYAG	1 cut(s)	1857
SfoI	GGCGCC	2 cut(s)	577, 664
Sfr274I	CTCGAG	1 cut(s)	760
SlaI	CTCGAG	1 cut(s)	760
SmiMI	CAYNNNNRTG	5 cut(s)	954, 1355, 1665, 2063, 2626
SmlI	CTYRAG	2 cut(s)	733, 760
SmoI	CTYRAG	2 cut(s)	733, 760
SpeI	ACTAGT	1 cut(s)	1547
SphI	GCATGC	1 cut(s)	2631
SspDI	GGCGCC	2 cut(s)	575, 662
SspMI	CTAG	5 cut(s)	1548, 1812, 1892, 2243, 2624
StyD4I	CCNGG	7 cut(s)	449, 700, 774, 841, 1197, 1447, 1663
StyI	CCWWGG	2 cut(s)	393, 459
TaaI	ACNGT	3 cut(s)	418, 2211, 2555
TaiI	ACGT	8 cut(s)	372, 404, 627, 675, 954, 1175, 1350, 1632
TaqII	GACCGA	1 cut(s)	2432
TatI	WGTACW	4 cut(s)	1224, 1563, 1831, 2274
TauI	GCSGC	6 cut(s)	444, 581, 609, 654, 1125, 2634
TfiI	GAWTC	8 cut(s)	342, 541, 642, 882, 902, 1499, 1767, 2562
Tru1I	TTAA	3 cut(s)	182, 1008, 1902
Tru9I	TTAA	3 cut(s)	182, 1008, 1902
TscAI	CASTG	7 cut(s)	292, 1254, 1705, 2229, 2284, 2412, 2560
TseFI	GTSAC	7 cut(s)	502, 889, 1046, 1135, 1245, 1780, 2205
TseI	GCWGC	7 cut(s)	648, 1087, 1277, 1888, 2115, 2464, 2662
Tsp45I	GTSAC	7 cut(s)	502, 889, 1046, 1135, 1245, 1780, 2205
TspGWI	ACGGA	4 cut(s)	191, 354, 586, 2585
TspRI	CASTG	7 cut(s)	292, 1254, 1705, 2229, 2284, 2412, 2560
Van91I	CCANNNNNTGG	1 cut(s)	2035
VneI	GTGCAC	1 cut(s)	2174
XapI	RAATTY	4 cut(s)	479, 2651, 2668, 2698
XceI	RCATGY	4 cut(s)	787, 1181, 1189, 2631
XhoI	CTCGAG	1 cut(s)	760
XmiI	GTMKAC	2 cut(s)	1094, 1632
XspI	CTAG	5 cut(s)	1548, 1812, 1892, 2243, 2624
ZrmI	AGTACT	1 cut(s)	1226
Zsp2I	ATGCAT	1 cut(s)	1917

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.