Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G06000 AT2G06000 |
| fragaria_vesca | FvH4_5g31880 |
| malus_domestica | MD02G1091700.v1.1 MD15G1217800.v1.1 |
| prunus_persica | Prupe.7G198600_v2.0.a1 |
| pyrus_communis | pycom02g07300 pycom15g19340 pycom15g33430 pycom15g33440 |
| rosa_chinensis | RchiOBHm_Chr7g0227901 |
| rosa_laevigata | RLG00000001605 |
| rosa_multiflora | Rmu_co8402659.1_g000001 Rmu_sc0000347.1_g000003 |
| rosa_roxburghii | Rroxscaffold_3G00231780 |
| rosa_rugosa | Rorug07G0244100 |
| rosa_samantha | Rh7AG397500 Rh7BG379100 Rh7CG415700 Rh7DG393000 |
| rosa_wichuraiana | Rw7G033070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 41 |
| AcoI | YGGCCR | 1 cut(s) | 60 |
| AgsI | TTSAA | 1 cut(s) | 11 |
| AoxI | GGCC | 1 cut(s) | 60 |
| AspLEI | GCGC | 1 cut(s) | 43 |
| BccI | CCATC | 1 cut(s) | 88 |
| BceAI | ACGGC | 1 cut(s) | 47 |
| BsaJI | CCNNGG | 1 cut(s) | 63 |
| BseDI | CCNNGG | 1 cut(s) | 63 |
| BseMII | CTCAG | 2 cut(s) | 81, 105 |
| BseRI | GAGGAG | 1 cut(s) | 223 |
| BseX3I | CGGCCG | 1 cut(s) | 60 |
| Bsh1236I | CGCG | 1 cut(s) | 41 |
| Bsh1285I | CGRYCG | 1 cut(s) | 63 |
| BshFI | GGCC | 1 cut(s) | 62 |
| BsiEI | CGRYCG | 1 cut(s) | 63 |
| BsnI | GGCC | 1 cut(s) | 62 |
| BspANI | GGCC | 1 cut(s) | 62 |
| BspCNI | CTCAG | 2 cut(s) | 82, 106 |
| BspFNI | CGCG | 1 cut(s) | 41 |
| BspQI | GCTCTTC | 1 cut(s) | 165 |
| BssECI | CCNNGG | 1 cut(s) | 63 |
| Bst6I | CTCTTC | 2 cut(s) | 165, 200 |
| BstDEI | CTNAG | 4 cut(s) | 21, 90, 114, 160 |
| BstDSI | CCRYGG | 1 cut(s) | 63 |
| BstFNI | CGCG | 1 cut(s) | 41 |
| BstHHI | GCGC | 1 cut(s) | 43 |
| BstMCI | CGRYCG | 1 cut(s) | 63 |
| BstUI | CGCG | 1 cut(s) | 41 |
| BstZI | CGGCCG | 1 cut(s) | 60 |
| BsuRI | GGCC | 1 cut(s) | 62 |
| BtgI | CCRYGG | 1 cut(s) | 63 |
| CfoI | GCGC | 1 cut(s) | 43 |
| CviJI | RGCY | 3 cut(s) | 7, 62, 134 |
| CviKI_1 | RGCY | 3 cut(s) | 7, 62, 134 |
| DdeI | CTNAG | 4 cut(s) | 21, 90, 114, 160 |
| EaeI | YGGCCR | 1 cut(s) | 60 |
| EagI | CGGCCG | 1 cut(s) | 60 |
| Eam1104I | CTCTTC | 2 cut(s) | 165, 200 |
| EarI | CTCTTC | 2 cut(s) | 165, 200 |
| EclXI | CGGCCG | 1 cut(s) | 60 |
| Eco52I | CGGCCG | 1 cut(s) | 60 |
| FaiI | YATR | 5 cut(s) | 18, 45, 87, 146, 185 |
| GlaI | GCGC | 1 cut(s) | 42 |
| HaeIII | GGCC | 1 cut(s) | 62 |
| HhaI | GCGC | 1 cut(s) | 43 |
| Hin6I | GCGC | 1 cut(s) | 41 |
| HinP1I | GCGC | 1 cut(s) | 41 |
| HinfI | GANTC | 1 cut(s) | 56 |
| Hpy188III | TCNNGA | 2 cut(s) | 11, 125 |
| Hpy99I | CGWCG | 1 cut(s) | 85 |
| HpyCH4V | TGCA | 1 cut(s) | 187 |
| HpyF3I | CTNAG | 4 cut(s) | 21, 90, 114, 160 |
| HspAI | GCGC | 1 cut(s) | 41 |
| LguI | GCTCTTC | 1 cut(s) | 165 |
| LpnPI | CCDG | 1 cut(s) | 63 |
| MboII | GAAGA | 5 cut(s) | 146, 179, 182, 214, 217 |
| MmeI | TCCRAC | 1 cut(s) | 84 |
| MnlI | CCTC | 3 cut(s) | 124, 157, 201 |
| MvnI | CGCG | 1 cut(s) | 41 |
| PciSI | GCTCTTC | 1 cut(s) | 165 |
| PfeI | GAWTC | 1 cut(s) | 56 |
| SapI | GCTCTTC | 1 cut(s) | 165 |
| SetI | ASST | 1 cut(s) | 52 |
| SgeI | CNNG | 7 cut(s) | 23, 52, 62, 76, 85, 112, 137 |
| TfiI | GAWTC | 1 cut(s) | 56 |