pycom15g38870

Protein of unknown function (DUF707)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0004588
Physical Location & Seq
Forward (+)
38606083 .. 38609063
2981 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 786 bp
ATGCTTTTTCATTATGACGGCGCGGTGGATAAATGGAGGGATTTACCTTGGAGTGATCATGCCATACACGTGTCTGTGATGAATCAAACAAAATGGTGGTTCGCCAAACGTTTCCTGCATCCAGATATAGTTTCGGAGTACAAATATATTTTTCTTTGGGATGAGGACCTTGGAGTTGAGAATTTTGACCCGATGCGATATCTATCCATAATTCAAGAAGAGGGACTGGAAATATCACAGCCAGCACTTGATCCTGACAAGTCAGAGGTGTATCATCCAATCACTGCACGTGTGAAGAATTCAAAAGTGCACAGACGGTTTTATAAGTATAAAGGCAGTGGAAGGTGTGACGACCATAGCTCTGCTCCTCCTTGTGCAGGTTGGGTGGAAATGATGGCGCCTGTATTTTCAAGAACTGCTTGGCAATGTGTATGGTACATGATCCAGAATGATTTGGTCCATGCATGGGGCCTGGATGTGCAGCTTGGTTATTGTGCACAAGGAGATCGAACACAAAACGTTGGTGTGGTTGACTCAGAGTATATAGTTCATCTTGGTCTTCCTACACTTGGTGTCTCGGATGGAAATAAGGTGACTAATTCCCCAAACCCATCTCAGAAGGGGGACTCGAAAGCATTGGCCCCATCTGCCTCTGATAAAGTCAATGGTAGATCTAAAGTTAGGATGCAGTCCTTTATTGATATGCAGATCTTTAAGGAAAGATGGAGTAATGCAGTAAAGGAGGAAAAATGTTGGGTTGACCCGTATCAACTAACAACAAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF707

Protein Analysis

262

Amino Acids

30.05

Weight (kDa)

6.13

Isoelectric Point (pI)

35.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF707 PF05212 1 - 248 1e-119 Protein of unknown function (DUF707)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 324
Acc36I ACCTGC 1 cut(s) 368
AccB1I GGYRCC 1 cut(s) 397
AccII CGCG 1 cut(s) 23
AciI CCGC 1 cut(s) 23
AclI AACGTT 2 cut(s) 109, 519
AclWI GGATC 2 cut(s) 245, 436
AcsI RAATTY 2 cut(s) 181, 298
AcvI CACGTG 2 cut(s) 70, 290
AcyI GRCGYC 1 cut(s) 398
AdeI CACNNNGTG 1 cut(s) 572
AfaI GTAC 2 cut(s) 140, 437
AfiI CCNNNNNNNGG 3 cut(s) 377, 466, 569
AflIII ACRYGT 3 cut(s) 67, 69, 289
AgsI TTSAA 3 cut(s) 215, 303, 411
AjnI CCWGG 1 cut(s) 471
AluBI AGCT 2 cut(s) 360, 484
AluI AGCT 2 cut(s) 360, 484
Alw21I GWGCWC 2 cut(s) 312, 499
Alw26I GTCTC 1 cut(s) 580
Alw44I GTGCAC 2 cut(s) 308, 495
AlwI GGATC 2 cut(s) 245, 436
AoxI GGCC 2 cut(s) 469, 639
ApaLI GTGCAC 2 cut(s) 308, 495
ApeKI GCWGC 1 cut(s) 481
ApoI RAATTY 2 cut(s) 181, 298
AspLEI GCGC 2 cut(s) 23, 400
AspS9I GGNCC 4 cut(s) 166, 457, 469, 640
AsuHPI GGTGA 1 cut(s) 604
AvaII GGWCC 2 cut(s) 166, 457
BaeGI GKGCMC 2 cut(s) 312, 499
BanI GGYRCC 1 cut(s) 397
BbrPI CACGTG 2 cut(s) 70, 290
BbsI GAAGAC 1 cut(s) 551
Bbv12I GWGCWC 2 cut(s) 312, 499
BbvI GCAGC 1 cut(s) 493
BccI CCATC 5 cut(s) 388, 575, 619, 652, 717
BceAI ACGGC 1 cut(s) 34
BciT130I CCWGG 1 cut(s) 473
BclI TGATCA 1 cut(s) 55
BcoDI GTCTC 1 cut(s) 580
BfoI RGCGCY 1 cut(s) 401
BfuAI ACCTGC 1 cut(s) 368
BglII AGATCT 2 cut(s) 671, 708
BisI GCNGC 1 cut(s) 482
BlsI GCNGC 1 cut(s) 483
Bme1390I CCNGG 1 cut(s) 473
Bme18I GGWCC 2 cut(s) 166, 457
BmgT120I GGNCC 4 cut(s) 166, 457, 469, 640
BmiI GGNNCC 3 cut(s) 399, 470, 642
BmrFI CCNGG 1 cut(s) 473
BmsI GCATC 3 cut(s) 127, 183, 675
BpiI GAAGAC 1 cut(s) 551
BsaAI YACGTR 2 cut(s) 70, 290
BsaBI GATNNNNATC 1 cut(s) 202
BsaHI GRCGYC 1 cut(s) 398
BsaJI CCNNGG 2 cut(s) 47, 169
Bsc4I CCNNNNNNNGG 3 cut(s) 377, 466, 569
Bse1I ACTGG 1 cut(s) 231
Bse3DI GCAATG 1 cut(s) 431
Bse8I GATNNNNATC 1 cut(s) 202
BseBI CCWGG 1 cut(s) 473
BseDI CCNNGG 2 cut(s) 47, 169
BseGI GGATG 6 cut(s) 118, 166, 274, 481, 586, 690
BseJI GATNNNNATC 1 cut(s) 202
BseLI CCNNNNNNNGG 3 cut(s) 377, 466, 569
BseMI GCAATG 1 cut(s) 431
BseMII CTCAG 2 cut(s) 549, 629
BseNI ACTGG 1 cut(s) 231
BseRI GAGGAG 1 cut(s) 357
BseSI GKGCMC 2 cut(s) 312, 499
BseXI GCAGC 1 cut(s) 493
BsgI GTGCAG 3 cut(s) 270, 396, 500
Bsh1236I CGCG 1 cut(s) 23
BshFI GGCC 2 cut(s) 471, 641
BshNI GGYRCC 1 cut(s) 397
BsiHKAI GWGCWC 2 cut(s) 312, 499
BslFI GGGAC 2 cut(s) 237, 638
BslI CCNNNNNNNGG 3 cut(s) 377, 466, 569
BsmAI GTCTC 1 cut(s) 580
BsmFI GGGAC 2 cut(s) 237, 638
BsnI GGCC 2 cut(s) 471, 641
Bsp1286I GDGCHC 2 cut(s) 312, 499
Bsp143I GATC 6 cut(s) 55, 250, 441, 505, 671, 708
BspACI CCGC 1 cut(s) 23
BspANI GGCC 2 cut(s) 471, 641
BspCNI CTCAG 2 cut(s) 548, 628
BspFNI CGCG 1 cut(s) 23
BspLI GGNNCC 3 cut(s) 399, 470, 642
BspMI ACCTGC 1 cut(s) 368
BspPI GGATC 2 cut(s) 245, 436
BspT107I GGYRCC 1 cut(s) 397
BsrDI GCAATG 1 cut(s) 431
BsrI ACTGG 1 cut(s) 231
BssECI CCNNGG 2 cut(s) 47, 169
BssMI GATC 6 cut(s) 55, 250, 441, 505, 671, 708
BssNI GRCGYC 1 cut(s) 398
BssT1I CCWWGG 2 cut(s) 47, 169
Bst2UI CCWGG 1 cut(s) 473
Bst4CI ACNGT 1 cut(s) 318
Bst6I CTCTTC 1 cut(s) 213
BstACI GRCGYC 1 cut(s) 398
BstBAI YACGTR 2 cut(s) 70, 290
BstC8I GCNNGC 1 cut(s) 243
BstDEI CTNAG 2 cut(s) 535, 615
BstENI CCTNNNNNAGG 1 cut(s) 375
BstF5I GGATG 6 cut(s) 118, 166, 274, 481, 586, 690
BstFNI CGCG 1 cut(s) 23
BstH2I RGCGCY 1 cut(s) 401
BstHHI GCGC 2 cut(s) 23, 400
BstKTI GATC 6 cut(s) 58, 253, 444, 508, 674, 711
BstMAI GTCTC 1 cut(s) 580
BstMBI GATC 6 cut(s) 55, 250, 441, 505, 671, 708
BstMWI GCNNNNNNNGC 1 cut(s) 647
BstNI CCWGG 1 cut(s) 473
BstSCI CCNGG 1 cut(s) 471
BstSLI GKGCMC 2 cut(s) 312, 499
BstUI CGCG 1 cut(s) 23
BstV1I GCAGC 1 cut(s) 493
BstV2I GAAGAC 1 cut(s) 551
BstX2I RGATCY 2 cut(s) 671, 708
BstYI RGATCY 2 cut(s) 671, 708
BsuRI GGCC 2 cut(s) 471, 641
BtsCI GGATG 6 cut(s) 118, 166, 274, 481, 586, 690
BtsI GCAGTG 2 cut(s) 282, 343
BtsIMutI CAGTG 2 cut(s) 282, 343
BveI ACCTGC 1 cut(s) 368
Cac8I GCNNGC 1 cut(s) 243
CfoI GCGC 2 cut(s) 23, 400
Cfr13I GGNCC 4 cut(s) 166, 457, 469, 640
Csp6I GTAC 2 cut(s) 139, 436
CviAII CATG 4 cut(s) 59, 439, 461, 465
CviJI RGCY 5 cut(s) 241, 360, 471, 484, 641
CviKI_1 RGCY 5 cut(s) 241, 360, 471, 484, 641
CviQI GTAC 2 cut(s) 139, 436
DdeI CTNAG 2 cut(s) 535, 615
DinI GGCGCC 1 cut(s) 399
DpnI GATC 6 cut(s) 57, 252, 443, 507, 673, 710
DpnII GATC 6 cut(s) 55, 250, 441, 505, 671, 708
DraIII CACNNNGTG 1 cut(s) 572
Eam1104I CTCTTC 1 cut(s) 213
EarI CTCTTC 1 cut(s) 213
Eco130I CCWWGG 2 cut(s) 47, 169
Eco32I GATATC 1 cut(s) 200
Eco47I GGWCC 2 cut(s) 166, 457
Eco72I CACGTG 2 cut(s) 70, 290
EcoNI CCTNNNNNAGG 1 cut(s) 375
EcoO109I RGGNCCY 2 cut(s) 166, 469
EcoRI GAATTC 1 cut(s) 298
EcoRII CCWGG 1 cut(s) 471
EcoRV GATATC 1 cut(s) 200
EcoT14I CCWWGG 2 cut(s) 47, 169
EcoT22I ATGCAT 1 cut(s) 466
EgeI GGCGCC 1 cut(s) 399
EheI GGCGCC 1 cut(s) 399
ErhI CCWWGG 2 cut(s) 47, 169
FaeI CATG 4 cut(s) 62, 442, 464, 468
FalI AAGNNNNNCTT 2 cut(s) 403, 435
FaqI GGGAC 2 cut(s) 237, 638
FatI CATG 4 cut(s) 58, 438, 460, 464
FbaI TGATCA 1 cut(s) 55
Fnu4HI GCNGC 1 cut(s) 482
FokI GGATG 6 cut(s) 105, 173, 261, 488, 593, 697
Fsp4HI GCNGC 1 cut(s) 482
GlaI GCGC 2 cut(s) 22, 399
GluI GCNGC 1 cut(s) 482
HaeII RGCGCY 1 cut(s) 401
HaeIII GGCC 2 cut(s) 471, 641
HhaI GCGC 2 cut(s) 23, 400
Hin1I GRCGYC 1 cut(s) 398
Hin1II CATG 4 cut(s) 62, 442, 464, 468
Hin6I GCGC 2 cut(s) 21, 398
HinP1I GCGC 2 cut(s) 21, 398
HincII GTYRAC 2 cut(s) 532, 760
HindII GTYRAC 2 cut(s) 532, 760
HinfI GANTC 3 cut(s) 82, 533, 626
HphI GGTGA 1 cut(s) 604
Hpy166II GTNNAC 4 cut(s) 310, 497, 532, 760
Hpy188I TCNGA 6 cut(s) 136, 265, 538, 580, 618, 655
Hpy188III TCNNGA 5 cut(s) 122, 215, 254, 411, 445
Hpy8I GTNNAC 4 cut(s) 310, 497, 532, 760
HpyAV CCTTC 2 cut(s) 336, 613
HpyCH4III ACNGT 1 cut(s) 318
HpyCH4IV ACGT 4 cut(s) 69, 109, 289, 519
HpyF10VI GCNNNNNNNGC 1 cut(s) 647
HpyF3I CTNAG 2 cut(s) 535, 615
HpySE526I ACGT 4 cut(s) 69, 109, 289, 519
Hsp92I GRCGYC 1 cut(s) 398
Hsp92II CATG 4 cut(s) 62, 442, 464, 468
HspAI GCGC 2 cut(s) 21, 398
KasI GGCGCC 1 cut(s) 397
Ksp22I TGATCA 1 cut(s) 55
Kzo9I GATC 6 cut(s) 55, 250, 441, 505, 671, 708
LmnI GCTCC 1 cut(s) 370
Lsp1109I GCAGC 1 cut(s) 493
LweI GCATC 3 cut(s) 127, 183, 675
MaeII ACGT 4 cut(s) 69, 109, 289, 519
MaeIII GTNAC 2 cut(s) 347, 592
MalI GATC 6 cut(s) 57, 252, 443, 507, 673, 710
MboI GATC 6 cut(s) 55, 250, 441, 505, 671, 708
MboII GAAGA 3 cut(s) 230, 307, 551
MflI RGATCY 2 cut(s) 671, 708
MhlI GDGCHC 2 cut(s) 312, 499
MluCI AATT 4 cut(s) 181, 210, 298, 598
Mly113I GGCGCC 1 cut(s) 398
MlyI GAGTC 2 cut(s) 527, 620
MnlI CCTC 7 cut(s) 30, 157, 214, 259, 378, 661, 736
Mph1103I ATGCAT 1 cut(s) 466
MseI TTAA 1 cut(s) 714
MslI CAYNNNNRTG 1 cut(s) 68
MspR9I CCNGG 1 cut(s) 473
MvaI CCWGG 1 cut(s) 473
MvnI CGCG 1 cut(s) 23
MwoI GCNNNNNNNGC 1 cut(s) 647
NarI GGCGCC 1 cut(s) 398
NdeII GATC 6 cut(s) 55, 250, 441, 505, 671, 708
NlaIII CATG 4 cut(s) 62, 442, 464, 468
NlaIV GGNNCC 3 cut(s) 399, 470, 642
NmuCI GTSAC 2 cut(s) 347, 592
NsiI ATGCAT 1 cut(s) 466
PfeI GAWTC 1 cut(s) 82
PkrI GCNGC 1 cut(s) 483
PleI GAGTC 2 cut(s) 527, 620
PluTI GGCGCC 1 cut(s) 401
PmaCI CACGTG 2 cut(s) 70, 290
PmlI CACGTG 2 cut(s) 70, 290
PpsI GAGTC 2 cut(s) 527, 620
Ppu21I YACGTR 2 cut(s) 70, 290
PpuMI RGGWCCY 1 cut(s) 166
PsiI TTATAA 1 cut(s) 324
Psp1406I AACGTT 2 cut(s) 109, 519
Psp5II RGGWCCY 1 cut(s) 166
Psp6I CCWGG 1 cut(s) 471
PspCI CACGTG 2 cut(s) 70, 290
PspGI CCWGG 1 cut(s) 471
PspN4I GGNNCC 3 cut(s) 399, 470, 642
PspPI GGNCC 4 cut(s) 166, 457, 469, 640
PspPPI RGGWCCY 1 cut(s) 166
PsuI RGATCY 2 cut(s) 671, 708
RsaI GTAC 2 cut(s) 140, 437
RsaNI GTAC 2 cut(s) 139, 436
RseI CAYNNNNRTG 1 cut(s) 68
SaqAI TTAA 1 cut(s) 714
SatI GCNGC 1 cut(s) 482
Sau3AI GATC 6 cut(s) 55, 250, 441, 505, 671, 708
Sau96I GGNCC 4 cut(s) 166, 457, 469, 640
SchI GAGTC 2 cut(s) 527, 620
ScrFI CCNGG 1 cut(s) 473
SduI GDGCHC 2 cut(s) 312, 499
SfaNI GCATC 3 cut(s) 127, 183, 675
SfoI GGCGCC 1 cut(s) 399
SinI GGWCC 2 cut(s) 166, 457
SmiMI CAYNNNNRTG 1 cut(s) 68
Sse9I AATT 4 cut(s) 181, 210, 298, 598
SsiI CCGC 1 cut(s) 23
SspDI GGCGCC 1 cut(s) 397
StyD4I CCNGG 1 cut(s) 471
StyI CCWWGG 2 cut(s) 47, 169
TaaI ACNGT 1 cut(s) 318
TaiI ACGT 4 cut(s) 72, 112, 292, 522
TaqI TCGA 2 cut(s) 508, 629
TasI AATT 4 cut(s) 181, 210, 298, 598
TatI WGTACW 1 cut(s) 138
TfiI GAWTC 1 cut(s) 82
Tru1I TTAA 1 cut(s) 714
Tru9I TTAA 1 cut(s) 714
TscAI CASTG 2 cut(s) 289, 343
TseFI GTSAC 2 cut(s) 347, 592
TseI GCWGC 1 cut(s) 481
Tsp45I GTSAC 2 cut(s) 347, 592
TspDTI ATGAA 2 cut(s) 95, 539
TspRI CASTG 2 cut(s) 289, 343
VneI GTGCAC 2 cut(s) 308, 495
VpaK11BI GGWCC 2 cut(s) 166, 457
XagI CCTNNNNNAGG 1 cut(s) 375
XapI RAATTY 2 cut(s) 181, 298
Zsp2I ATGCAT 1 cut(s) 466
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.